SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    828801 8ip8:gb (2.9) BS01 rna ? GO:0003735 ... A0A2X0SLI3 38267667
    828802 8ip8:ha (2.9) BS01 rna ? GO:0005080 ... W5D4F5 38267667
    828803 8ip8:hb (2.9) BS01 rna ? GO:0003735 ... Q5I7K2 38267667
    828804 8ip8:ia (2.9) BS01 rna ? GO:0003723 ... Q8L804 38267667
    828805 8ip8:ib (2.9) BS01 rna ? GO:0003735 ... W5BFB7 38267667
    828806 8ip8:ja (2.9) BS01 rna ? GO:0003723 ... A0A1D5SLI4 38267667
    828807 8ip8:ja (2.9) BS02 MG ? GO:0003723 ... A0A1D5SLI4 38267667
    828808 8ip8:ka (2.9) BS01 rna ? GO:0000028 ... W5D067 38267667
    828809 8ip8:ka (2.9) BS02 MG ? GO:0000028 ... W5D067 38267667
    828810 8ip8:la (2.9) BS01 rna ? GO:0000462 ... A0A3B6HX49 38267667
    828811 8ip8:ma (2.9) BS01 rna ? GO:0003735 ... U5HTD8 38267667
    828812 8ip8:na (2.9) BS01 rna ? GO:0000028 ... A0A3B6SS17 38267667
    828813 8ip8:oa (2.9) BS01 rna ? GO:0003676 ... Q8L806 38267667
    828814 8ip8:pa (2.9) BS01 rna ? GO:0003735 ... Q5XUU9 38267667
    828815 8ip8:pa (2.9) BS02 rna ? GO:0003735 ... Q5XUU9 38267667
    828816 8ip8:qa (2.9) BS01 rna ? GO:0003735 ... A0A3B5YWZ3 38267667
    828817 8ip8:ra (2.9) BS01 rna ? GO:0003735 ... W5FWF5 38267667
    828818 8ip8:sa (2.9) BS01 rna ? GO:0000028 ... W5ASA4 38267667
    828819 8ip8:ta (2.9) BS01 rna ? GO:0003735 ... W5EP45 38267667
    828820 8ip8:ua (2.9) BS01 rna ? GO:0003735 ... Q7X9K4 38267667
    828821 8ip8:va (2.9) BS01 rna ? GO:0003735 ... A0A077RZD1 38267667
    828822 8ip8:wa (2.9) BS01 rna ? GO:0002181 ... Q5I7K3 38267667
    828823 8ip8:wa (2.9) BS02 ZN ? GO:0002181 ... Q5I7K3 38267667
    828824 8ip8:xa (2.9) BS01 rna ? GO:0000028 ... A0A341UET3 38267667
    828825 8ip8:ya (2.9) BS01 rna ? GO:0003735 ... A0A3B6S9M7 38267667
    828826 8ip8:za (2.9) BS01 rna ? GO:0000028 ... W5E2W7 38267667
    828827 8ip9:ba (3.0) BS01 rna ? GO:0003735 ... A0A3B6PK86 38267667
    828828 8ip9:bb (3.0) BS01 rna ? GO:0003735 ... A0A3B6IU74 38267667
    828829 8ip9:ca (3.0) BS01 rna ? GO:0000462 ... A0A3B6AYT7 38267667
    828830 8ip9:cb (3.0) BS01 rna ? GO:0000447 ... W5EL62 38267667
    828831 8ip9:da (3.0) BS01 rna ? GO:0003723 ... W5AUH7 38267667
    828832 8ip9:db (3.0) BS01 rna ? GO:0003729 ... A0A3B6LWE1 38267667
    828833 8ip9:db (3.0) BS02 ZN ? GO:0003729 ... A0A3B6LWE1 38267667
    828834 8ip9:eb (3.0) BS01 rna ? GO:0003723 ... W5FPA7 38267667
    828835 8ip9:fb (3.0) BS01 rna ? GO:0003723 ... A0A3B6LVN2 38267667
    828836 8ip9:ga (3.0) BS01 rna ? GO:0003735 ... W5FV77 38267667
    828837 8ip9:gb (3.0) BS01 rna ? GO:0003735 ... A0A2X0SLI3 38267667
    828838 8ip9:ha (3.0) BS01 rna ? GO:0005080 ... W5D4F5 38267667
    828839 8ip9:hb (3.0) BS01 rna ? GO:0003735 ... Q5I7K2 38267667
    828840 8ip9:ia (3.0) BS01 rna ? GO:0003723 ... Q8L804 38267667
    828841 8ip9:ib (3.0) BS01 rna ? GO:0003735 ... W5BFB7 38267667
    828842 8ip9:ja (3.0) BS01 rna ? GO:0003723 ... A0A1D5SLI4 38267667
    828843 8ip9:ja (3.0) BS02 MG ? GO:0003723 ... A0A1D5SLI4 38267667
    828844 8ip9:ka (3.0) BS01 rna ? GO:0000028 ... W5D067 38267667
    828845 8ip9:ka (3.0) BS02 MG ? GO:0000028 ... W5D067 38267667
    828846 8ip9:la (3.0) BS01 rna ? GO:0000462 ... A0A3B6HX49 38267667
    828847 8ip9:ma (3.0) BS01 rna ? GO:0003735 ... U5HTD8 38267667
    828848 8ip9:na (3.0) BS01 rna ? GO:0000028 ... A0A3B6SS17 38267667
    828849 8ip9:oa (3.0) BS01 rna ? GO:0003676 ... Q8L806 38267667
    828850 8ip9:pa (3.0) BS01 rna ? GO:0003735 ... Q5XUU9 38267667
    828851 8ip9:qa (3.0) BS01 rna ? GO:0003735 ... A0A3B5YWZ3 38267667
    828852 8ip9:ra (3.0) BS01 rna ? GO:0003735 ... W5FWF5 38267667
    828853 8ip9:sa (3.0) BS01 rna ? GO:0000028 ... W5ASA4 38267667
    828854 8ip9:ta (3.0) BS01 rna ? GO:0003735 ... W5EP45 38267667
    828855 8ip9:ua (3.0) BS01 rna ? GO:0003735 ... Q7X9K4 38267667
    828856 8ip9:va (3.0) BS01 rna ? GO:0003735 ... A0A077RZD1 38267667
    828857 8ip9:wa (3.0) BS01 rna ? GO:0002181 ... Q5I7K3 38267667
    828858 8ip9:wa (3.0) BS02 ZN ? GO:0002181 ... Q5I7K3 38267667
    828859 8ip9:xa (3.0) BS01 rna ? GO:0000028 ... W5HZ68 38267667
    828860 8ip9:ya (3.0) BS01 rna ? GO:0003735 ... A0A3B6S9M7 38267667
    828861 8ip9:za (3.0) BS01 rna ? GO:0000028 ... W5E2W7 38267667
    828862 8ipa:AA (3.4) BS01 rna ? GO:0000470 ... A0A3B6RED0 38267667
    828863 8ipa:AA (3.4) BS02 rna ? GO:0000470 ... A0A3B6RED0 38267667
    828864 8ipa:AB (3.4) BS01 rna ? GO:0002181 ... Q5I7L5 38267667
    828865 8ipa:BA (3.4) BS01 rna ? GO:0003735 ... F4YWL9 38267667
    828866 8ipa:BA (3.4) BS02 rna ? GO:0003735 ... F4YWL9 38267667
    828867 8ipa:BB (3.4) BS01 rna ? GO:0000463 ... Q8L805 38267667
    828868 8ipa:BB (3.4) BS02 rna ? GO:0000463 ... Q8L805 38267667
    828869 8ipa:CA (3.4) BS01 rna ? GO:0003735 ... A0A341XZK6 38267667
    828870 8ipa:CB (3.4) BS01 rna ? GO:0000463 ... A0A3B6DM38 38267667
    828871 8ipa:CB (3.4) BS02 rna ? GO:0000463 ... A0A3B6DM38 38267667
    828872 8ipa:DA (3.4) BS01 rna ? GO:0002181 ... W5ECL2 38267667
    828873 8ipa:DA (3.4) BS02 rna ? GO:0002181 ... W5ECL2 38267667
    828874 8ipa:DA (3.4) BS03 MG ? GO:0002181 ... W5ECL2 38267667
    828875 8ipa:DB (3.4) BS01 rna ? GO:0003723 ... Q7X748 38267667
    828876 8ipa:DB (3.4) BS02 MG ? GO:0003723 ... Q7X748 38267667
    828877 8ipa:EA (3.4) BS01 rna ? GO:0003723 ... A0A3B5XX39 38267667
    828878 8ipa:EA (3.4) BS02 rna ? GO:0003723 ... A0A3B5XX39 38267667
    828879 8ipa:EA (3.4) BS03 rna ? GO:0003723 ... A0A3B5XX39 38267667
    828880 8ipa:EB (3.4) BS01 rna ? GO:0003723 ... A0A3B5ZXX7 38267667
    828881 8ipa:EB (3.4) BS02 rna ? GO:0003723 ... A0A3B5ZXX7 38267667
    828882 8ipa:FA (3.4) BS01 rna ? GO:0002181 ... W5I5G5 38267667
    828883 8ipa:FB (3.4) BS01 rna ? GO:0003729 ... Q5I7L1 38267667
    828884 8ipa:GA (3.4) BS01 rna ? GO:0003735 ... Q5I7K4 38267667
    828885 8ipa:GB (3.4) BS01 rna ? GO:0003735 ... D8L9P6 38267667
    828886 8ipa:GB (3.4) BS02 ZN ? GO:0003735 ... D8L9P6 38267667
    828887 8ipa:HA (3.4) BS01 rna ? GO:0002181 ... W5FEX7 38267667
    828888 8ipa:HA (3.4) BS02 rna ? GO:0002181 ... W5FEX7 38267667
    828889 8ipa:HB (3.4) BS01 rna ? GO:0003735 ... A0A3B6HUM3 38267667
    828890 8ipa:HB (3.4) BS02 rna ? GO:0003735 ... A0A3B6HUM3 38267667
    828891 8ipa:IA (3.4) BS01 rna ? GO:0003735 ... A0A3B6DCS5 38267667
    828892 8ipa:JA (3.4) BS01 rna ? GO:0003723 ... A0A3B6ATQ1 38267667
    828893 8ipa:JB (3.4) BS01 rna ? GO:0003729 ... A0A1D5XNC2 38267667
    828894 8ipa:KA (3.4) BS01 rna ? GO:0003735 ... W5BZZ2 38267667
    828895 8ipa:KA (3.4) BS02 rna ? GO:0003735 ... W5BZZ2 38267667
    828896 8ipa:KB (3.4) BS01 rna ? GO:0003723 ... A0A3B6NJZ9 38267667
    828897 8ipa:KB (3.4) BS02 rna ? GO:0003723 ... A0A3B6NJZ9 38267667
    828898 8ipa:LA (3.4) BS01 rna ? GO:0003723 ... A0A3B6DA12 38267667
    828899 8ipa:LA (3.4) BS02 rna ? GO:0003723 ... A0A3B6DA12 38267667
    828900 8ipa:LB (3.4) BS01 rna ? GO:0003735 ... A0A3B6QGW3 38267667
    828901 8ipa:MA (3.4) BS01 rna ? GO:0002181 ... W5FSM8 38267667
    828902 8ipa:MA (3.4) BS02 rna ? GO:0002181 ... W5FSM8 38267667
    828903 8ipa:MB (3.4) BS01 rna ? GO:0002181 ... A0A0C4BK99 38267667
    828904 8ipa:NA (3.4) BS01 rna ? GO:0003735 ... A0A1D5UQZ5 38267667
    828905 8ipa:NA (3.4) BS02 rna ? GO:0003735 ... A0A1D5UQZ5 38267667
    828906 8ipa:NB (3.4) BS01 rna ? GO:0003735 ... A0A1D5W6Q2 38267667
    828907 8ipa:OA (3.4) BS01 rna ? GO:0002181 ... W5CDW4 38267667
    828908 8ipa:OB (3.4) BS01 rna ? GO:0002181 ... A0A1D5RRD3 38267667
    828909 8ipa:PA (3.4) BS01 rna ? GO:0002181 ... A0A3B6GQI2 38267667
    828910 8ipa:PA (3.4) BS02 rna ? GO:0002181 ... A0A3B6GQI2 38267667
    828911 8ipa:PB (3.4) BS01 rna ? GO:0003735 ... A0A3B6RFY8 38267667
    828912 8ipa:PB (3.4) BS02 MG ? GO:0003735 ... A0A3B6RFY8 38267667
    828913 8ipa:QA (3.4) BS01 rna ? GO:0003735 ... A0A3B5ZZN9 38267667
    828914 8ipa:RA (3.4) BS01 rna ? GO:0003723 ... Q5I7K9 38267667
    828915 8ipa:SA (3.4) BS01 rna ? GO:0002181 ... W5G990 38267667
    828916 8ipa:TA (3.4) BS01 rna ? GO:0003735 ... A0A3B6SDD9 38267667
    828917 8ipa:UA (3.4) BS01 rna ? GO:0003723 ... A0A1D6BC85 38267667
    828918 8ipa:UA (3.4) BS02 rna ? GO:0003723 ... A0A1D6BC85 38267667
    828919 8ipa:VA (3.4) BS01 rna ? GO:0003735 ... M7ZU91 38267667
    828920 8ipa:VA (3.4) BS02 rna ? GO:0003735 ... M7ZU91 38267667
    828921 8ipa:WA (3.4) BS01 rna ? GO:0003735 ... W5HX73 38267667
    828922 8ipa:WA (3.4) BS02 ZN ? GO:0003735 ... W5HX73 38267667
    828923 8ipa:XA (3.4) BS01 rna ? GO:0003723 ... A0A3B6DGT8 38267667
    828924 8ipa:YA (3.4) BS01 rna ? GO:0002181 ... W5D7B8 38267667
    828925 8ipa:YA (3.4) BS02 rna ? GO:0002181 ... W5D7B8 38267667
    828926 8ipa:ZA (3.4) BS01 rna ? GO:0002181 ... A0A3B6C0D4 38267667
    828927 8ipa:ba (3.4) BS01 rna ? GO:0003735 ... A0A3B6PK86 38267667
    828928 8ipa:bb (3.4) BS01 rna ? GO:0003735 ... A0A3B6IU74 38267667
    828929 8ipa:bl (3.4) BS01 rna ? GO:0002184 ... I3NM28 38267667
    828930 8ipa:bl (3.4) BS02 rna ? GO:0002184 ... I3NM28 38267667
    828931 8ipa:bl (3.4) BS03 rna ? GO:0002184 ... I3NM28 38267667
    828932 8ipa:bl (3.4) BS04 rna ? GO:0002184 ... I3NM28 38267667
    828933 8ipa:ca (3.4) BS01 rna ? GO:0000462 ... A0A3B6AYT7 38267667
    828934 8ipa:ca (3.4) BS02 rna ? GO:0000462 ... A0A3B6AYT7 38267667
    828935 8ipa:cb (3.4) BS01 rna ? GO:0000447 ... W5EL62 38267667
    828936 8ipa:da (3.4) BS01 rna ? GO:0003723 ... W5AUH7 38267667
    828937 8ipa:db (3.4) BS01 rna ? GO:0003729 ... A0A3B6LWE1 38267667
    828938 8ipa:db (3.4) BS02 ZN ? GO:0003729 ... A0A3B6LWE1 38267667
    828939 8ipa:eb (3.4) BS01 rna ? GO:0003723 ... W5FPA7 38267667
    828940 8ipa:fb (3.4) BS01 rna ? GO:0003723 ... A0A3B6LVN2 38267667
    828941 8ipa:ga (3.4) BS01 rna ? GO:0003735 ... W5FV77 38267667
    828942 8ipa:gb (3.4) BS01 rna ? GO:0003735 ... A0A2X0SLI3 38267667
    828943 8ipa:ha (3.4) BS01 rna ? GO:0005080 ... W5D4F5 38267667
    828944 8ipa:hb (3.4) BS01 rna ? GO:0003735 ... Q5I7K2 38267667
    828945 8ipa:ia (3.4) BS01 rna ? GO:0003723 ... Q8L804 38267667
    828946 8ipa:ib (3.4) BS01 rna ? GO:0003735 ... W5BFB7 38267667
    828947 8ipa:ja (3.4) BS01 rna ? GO:0003723 ... A0A1D5SLI4 38267667
    828948 8ipa:ka (3.4) BS01 rna ? GO:0000028 ... W5D067 38267667
    828949 8ipa:la (3.4) BS01 rna ? GO:0000462 ... A0A3B6HX49 38267667
    828950 8ipa:ma (3.4) BS01 rna ? GO:0003735 ... U5HTD8 38267667
    828951 8ipa:na (3.4) BS01 rna ? GO:0000028 ... A0A3B6SS17 38267667
    828952 8ipa:oa (3.4) BS01 rna ? GO:0003676 ... Q8L806 38267667
    828953 8ipa:pa (3.4) BS01 rna ? GO:0003735 ... Q5XUU9 38267667
    828954 8ipa:pa (3.4) BS02 rna ? GO:0003735 ... Q5XUU9 38267667
    828955 8ipa:qa (3.4) BS01 rna ? GO:0003735 ... A0A3B5YWZ3 38267667
    828956 8ipa:ra (3.4) BS01 rna ? GO:0003735 ... W5FWF5 38267667
    828957 8ipa:sa (3.4) BS01 rna ? GO:0000028 ... W5ASA4 38267667
    828958 8ipa:ta (3.4) BS01 rna ? GO:0003735 ... W5EP45 38267667
    828959 8ipa:ua (3.4) BS01 rna ? GO:0003735 ... Q7X9K4 38267667
    828960 8ipa:va (3.4) BS01 rna ? GO:0003735 ... A0A077RZD1 38267667
    828961 8ipa:wa (3.4) BS01 rna ? GO:0002181 ... Q5I7K3 38267667
    828962 8ipa:wa (3.4) BS02 ZN ? GO:0002181 ... Q5I7K3 38267667
    828963 8ipa:xa (3.4) BS01 rna ? GO:0000028 ... A0A341UET3 38267667
    828964 8ipa:ya (3.4) BS01 rna ? GO:0003735 ... A0A3B6S9M7 38267667
    828965 8ipa:za (3.4) BS01 rna ? GO:0000028 ... W5E2W7 38267667
    828966 8ipb:AA (3.4) BS01 rna ? GO:0000470 ... A0A3B6RED0 38267667
    828967 8ipb:AA (3.4) BS02 rna ? GO:0000470 ... A0A3B6RED0 38267667
    828968 8ipb:AB (3.4) BS01 rna ? GO:0002181 ... Q5I7L5 38267667
    828969 8ipb:BA (3.4) BS01 rna ? GO:0003735 ... F4YWL9 38267667
    828970 8ipb:BA (3.4) BS02 rna ? GO:0003735 ... F4YWL9 38267667
    828971 8ipb:BB (3.4) BS01 rna ? GO:0000463 ... Q8L805 38267667
    828972 8ipb:BB (3.4) BS02 rna ? GO:0000463 ... Q8L805 38267667
    828973 8ipb:CA (3.4) BS01 rna ? GO:0003735 ... A0A341XZK6 38267667
    828974 8ipb:CB (3.4) BS01 rna ? GO:0000463 ... A0A3B6DM38 38267667
    828975 8ipb:CB (3.4) BS02 rna ? GO:0000463 ... A0A3B6DM38 38267667
    828976 8ipb:DA (3.4) BS01 rna ? GO:0002181 ... W5ECL2 38267667
    828977 8ipb:DA (3.4) BS02 rna ? GO:0002181 ... W5ECL2 38267667
    828978 8ipb:DA (3.4) BS03 MG ? GO:0002181 ... W5ECL2 38267667
    828979 8ipb:DB (3.4) BS01 rna ? GO:0003723 ... Q7X748 38267667
    828980 8ipb:EA (3.4) BS01 rna ? GO:0003723 ... A0A3B5XX39 38267667
    828981 8ipb:EA (3.4) BS02 rna ? GO:0003723 ... A0A3B5XX39 38267667
    828982 8ipb:EA (3.4) BS03 rna ? GO:0003723 ... A0A3B5XX39 38267667
    828983 8ipb:EB (3.4) BS01 rna ? GO:0003723 ... A0A3B5ZXX7 38267667
    828984 8ipb:EB (3.4) BS02 rna ? GO:0003723 ... A0A3B5ZXX7 38267667
    828985 8ipb:FA (3.4) BS01 rna ? GO:0002181 ... W5I5G5 38267667
    828986 8ipb:FB (3.4) BS01 rna ? GO:0003729 ... Q5I7L1 38267667
    828987 8ipb:GA (3.4) BS01 rna ? GO:0003735 ... Q5I7K4 38267667
    828988 8ipb:GB (3.4) BS01 rna ? GO:0003735 ... D8L9P6 38267667
    828989 8ipb:GB (3.4) BS02 ZN ? GO:0003735 ... D8L9P6 38267667
    828990 8ipb:HA (3.4) BS01 rna ? GO:0002181 ... W5FEX7 38267667
    828991 8ipb:HA (3.4) BS02 rna ? GO:0002181 ... W5FEX7 38267667
    828992 8ipb:HB (3.4) BS01 rna ? GO:0003735 ... A0A3B6HUM3 38267667
    828993 8ipb:HB (3.4) BS02 rna ? GO:0003735 ... A0A3B6HUM3 38267667
    828994 8ipb:IA (3.4) BS01 rna ? GO:0003735 ... A0A3B6DCS5 38267667
    828995 8ipb:JA (3.4) BS01 rna ? GO:0003723 ... A0A3B6ATQ1 38267667
    828996 8ipb:JB (3.4) BS01 rna ? GO:0003729 ... A0A1D5XNC2 38267667
    828997 8ipb:KA (3.4) BS01 rna ? GO:0003735 ... W5BZZ2 38267667
    828998 8ipb:KA (3.4) BS02 rna ? GO:0003735 ... W5BZZ2 38267667
    828999 8ipb:KB (3.4) BS01 rna ? GO:0003723 ... A0A3B6NJZ9 38267667
    829000 8ipb:KB (3.4) BS02 rna ? GO:0003723 ... A0A3B6NJZ9 38267667

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).