SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    829601 8ir5:C (2.15) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    829602 8ir5:C (2.15) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    829603 8ir5:C (2.15) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    829604 8ir5:C (2.15) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    829605 8ir5:C (2.15) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    829606 8ir5:C (2.15) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    829607 8ir5:C (2.15) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    829608 8ir5:C (2.15) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    829609 8ir5:C (2.15) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    829610 8ir5:C (2.15) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    829611 8ir5:C (2.15) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    829612 8ir5:C (2.15) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    829613 8ir5:C (2.15) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    829614 8ir5:C (2.15) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    829615 8ir5:D (2.15) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829616 8ir5:D (2.15) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829617 8ir5:D (2.15) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829618 8ir5:D (2.15) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829619 8ir5:D (2.15) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829620 8ir5:D (2.15) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829621 8ir5:D (2.15) BS07 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829622 8ir5:D (2.15) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829623 8ir5:D (2.15) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829624 8ir5:E (2.15) BS01 HEM ? GO:0005506 ... P12238 38297122
    829625 8ir5:F (2.15) BS01 HEM ? GO:0005506 ... P12239 38297122
    829626 8ir5:H (2.15) BS01 CLA ? GO:0009523 ... P19052 38297122
    829627 8ir5:H (2.15) BS02 CLA ? GO:0009523 ... P19052 38297122
    829628 8ir5:H (2.15) BS03 CLA ? GO:0009523 ... P19052 38297122
    829629 8ir5:I (2.15) BS01 CLA ? GO:0005737 ... P12240 38297122
    829630 8ir5:J (2.15) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    829631 8ir5:K (2.15) BS01 peptide ? GO:0005737 ... P19054 38297122
    829632 8ir5:K (2.15) BS02 CLA ? GO:0005737 ... P19054 38297122
    829633 8ir5:K (2.15) BS03 CLA ? GO:0005737 ... P19054 38297122
    829634 8ir5:O (2.15) BS01 CA ? GO:0009523 ... D0VWR2 38297122
    829635 8ir5:V (2.15) BS01 HEC ? GO:0005506 ... P0A387 38297122
    829636 8ir5:X (2.15) BS01 CLA ? GO:0009523 ... D0VWR4 38297122
    829637 8ir5:Z (2.15) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    829638 8ir5:a (2.15) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    829639 8ir5:a (2.15) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    829640 8ir5:a (2.15) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    829641 8ir5:a (2.15) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    829642 8ir5:a (2.15) BS05 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    829643 8ir5:a (2.15) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    829644 8ir5:a (2.15) BS07 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    829645 8ir5:a (2.15) BS08 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    829646 8ir5:a (2.15) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    829647 8ir5:b (2.15) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    829648 8ir5:b (2.15) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    829649 8ir5:b (2.15) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    829650 8ir5:b (2.15) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    829651 8ir5:b (2.15) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    829652 8ir5:b (2.15) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    829653 8ir5:b (2.15) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    829654 8ir5:b (2.15) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    829655 8ir5:b (2.15) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    829656 8ir5:b (2.15) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    829657 8ir5:b (2.15) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    829658 8ir5:b (2.15) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    829659 8ir5:b (2.15) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    829660 8ir5:b (2.15) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    829661 8ir5:b (2.15) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    829662 8ir5:c (2.15) BS01 OEX ? GO:0005737 ... D0VWR7 38297122
    829663 8ir5:c (2.15) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    829664 8ir5:c (2.15) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    829665 8ir5:c (2.15) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    829666 8ir5:c (2.15) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    829667 8ir5:c (2.15) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    829668 8ir5:c (2.15) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    829669 8ir5:c (2.15) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    829670 8ir5:c (2.15) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    829671 8ir5:c (2.15) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    829672 8ir5:c (2.15) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    829673 8ir5:c (2.15) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    829674 8ir5:c (2.15) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    829675 8ir5:c (2.15) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    829676 8ir5:c (2.15) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    829677 8ir5:c (2.15) BS16 CA ? GO:0005737 ... D0VWR7 38297122
    829678 8ir5:d (2.15) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829679 8ir5:d (2.15) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829680 8ir5:d (2.15) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829681 8ir5:d (2.15) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829682 8ir5:d (2.15) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829683 8ir5:d (2.15) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829684 8ir5:d (2.15) BS07 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829685 8ir5:d (2.15) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829686 8ir5:d (2.15) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829687 8ir5:e (2.15) BS01 HEM ? GO:0005506 ... P12238 38297122
    829688 8ir5:f (2.15) BS01 HEM ? GO:0005506 ... P12239 38297122
    829689 8ir5:h (2.15) BS01 CLA ? GO:0009523 ... P19052 38297122
    829690 8ir5:h (2.15) BS02 CLA ? GO:0009523 ... P19052 38297122
    829691 8ir5:h (2.15) BS03 CLA ? GO:0009523 ... P19052 38297122
    829692 8ir5:i (2.15) BS01 CLA ? GO:0005737 ... P12240 38297122
    829693 8ir5:j (2.15) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    829694 8ir5:k (2.15) BS01 peptide ? GO:0005737 ... P19054 38297122
    829695 8ir5:k (2.15) BS02 CLA ? GO:0005737 ... P19054 38297122
    829696 8ir5:k (2.15) BS03 CLA ? GO:0005737 ... P19054 38297122
    829697 8ir5:o (2.15) BS01 CA ? GO:0009523 ... D0VWR2 38297122
    829698 8ir5:v (2.15) BS01 HEC ? GO:0005506 ... P0A387 38297122
    829699 8ir5:z (2.15) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    829700 8ir6:A (2.2) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    829701 8ir6:A (2.2) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    829702 8ir6:A (2.2) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    829703 8ir6:A (2.2) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    829704 8ir6:A (2.2) BS05 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    829705 8ir6:A (2.2) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    829706 8ir6:A (2.2) BS07 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    829707 8ir6:A (2.2) BS08 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    829708 8ir6:A (2.2) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    829709 8ir6:B (2.2) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    829710 8ir6:B (2.2) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    829711 8ir6:B (2.2) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    829712 8ir6:B (2.2) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    829713 8ir6:B (2.2) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    829714 8ir6:B (2.2) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    829715 8ir6:B (2.2) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    829716 8ir6:B (2.2) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    829717 8ir6:B (2.2) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    829718 8ir6:B (2.2) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    829719 8ir6:B (2.2) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    829720 8ir6:B (2.2) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    829721 8ir6:B (2.2) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    829722 8ir6:B (2.2) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    829723 8ir6:B (2.2) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    829724 8ir6:B (2.2) BS16 CLA ? GO:0009521 ... D0VWR1 38297122
    829725 8ir6:C (2.2) BS01 OEX ? GO:0005737 ... D0VWR7 38297122
    829726 8ir6:C (2.2) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    829727 8ir6:C (2.2) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    829728 8ir6:C (2.2) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    829729 8ir6:C (2.2) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    829730 8ir6:C (2.2) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    829731 8ir6:C (2.2) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    829732 8ir6:C (2.2) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    829733 8ir6:C (2.2) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    829734 8ir6:C (2.2) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    829735 8ir6:C (2.2) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    829736 8ir6:C (2.2) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    829737 8ir6:C (2.2) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    829738 8ir6:C (2.2) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    829739 8ir6:C (2.2) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    829740 8ir6:D (2.2) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829741 8ir6:D (2.2) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829742 8ir6:D (2.2) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829743 8ir6:D (2.2) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829744 8ir6:D (2.2) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829745 8ir6:D (2.2) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829746 8ir6:D (2.2) BS07 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829747 8ir6:D (2.2) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829748 8ir6:D (2.2) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    829749 8ir6:E (2.2) BS01 HEM ? GO:0005506 ... P12238 38297122
    829750 8ir6:F (2.2) BS01 HEM ? GO:0005506 ... P12239 38297122
    829751 8ir6:H (2.2) BS01 CLA ? GO:0009523 ... P19052 38297122
    829752 8ir6:H (2.2) BS02 CLA ? GO:0009523 ... P19052 38297122
    829753 8ir6:H (2.2) BS03 CLA ? GO:0009523 ... P19052 38297122
    829754 8ir6:I (2.2) BS01 CLA ? GO:0005737 ... P12240 38297122
    829755 8ir6:J (2.2) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    829756 8ir6:K (2.2) BS01 peptide ? GO:0005737 ... P19054 38297122
    829757 8ir6:K (2.2) BS02 CLA ? GO:0005737 ... P19054 38297122
    829758 8ir6:K (2.2) BS03 CLA ? GO:0005737 ... P19054 38297122
    829759 8ir6:O (2.2) BS01 CA ? GO:0009523 ... D0VWR2 38297122
    829760 8ir6:V (2.2) BS01 HEC ? GO:0005506 ... P0A387 38297122
    829761 8ir6:Z (2.2) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    829762 8ir6:a (2.2) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    829763 8ir6:a (2.2) BS02 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    829764 8ir6:a (2.2) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    829765 8ir6:a (2.2) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    829766 8ir6:a (2.2) BS05 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    829767 8ir6:a (2.2) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    829768 8ir6:a (2.2) BS07 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    829769 8ir6:a (2.2) BS08 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    829770 8ir6:a (2.2) BS09 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    829771 8ir6:b (2.2) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    829772 8ir6:b (2.2) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    829773 8ir6:b (2.2) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    829774 8ir6:b (2.2) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    829775 8ir6:b (2.2) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    829776 8ir6:b (2.2) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    829777 8ir6:b (2.2) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    829778 8ir6:b (2.2) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    829779 8ir6:b (2.2) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    829780 8ir6:b (2.2) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    829781 8ir6:b (2.2) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    829782 8ir6:b (2.2) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    829783 8ir6:b (2.2) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    829784 8ir6:b (2.2) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    829785 8ir6:b (2.2) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    829786 8ir6:c (2.2) BS01 OEX ? GO:0005737 ... D0VWR7 38297122
    829787 8ir6:c (2.2) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    829788 8ir6:c (2.2) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    829789 8ir6:c (2.2) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    829790 8ir6:c (2.2) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    829791 8ir6:c (2.2) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    829792 8ir6:c (2.2) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    829793 8ir6:c (2.2) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    829794 8ir6:c (2.2) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    829795 8ir6:c (2.2) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    829796 8ir6:c (2.2) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    829797 8ir6:c (2.2) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    829798 8ir6:c (2.2) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    829799 8ir6:c (2.2) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    829800 8ir6:c (2.2) BS15 CA ? GO:0005737 ... D0VWR7 38297122

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).