SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    830001 8ir8:D (2.25) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830002 8ir8:E (2.25) BS01 HEM ? GO:0005506 ... P12238 38297122
    830003 8ir8:F (2.25) BS01 HEM ? GO:0005506 ... P12239 38297122
    830004 8ir8:H (2.25) BS01 CLA ? GO:0009523 ... P19052 38297122
    830005 8ir8:H (2.25) BS02 CLA ? GO:0009523 ... P19052 38297122
    830006 8ir8:H (2.25) BS03 CLA ? GO:0009523 ... P19052 38297122
    830007 8ir8:I (2.25) BS01 CLA ? GO:0005737 ... P12240 38297122
    830008 8ir8:J (2.25) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    830009 8ir8:K (2.25) BS01 peptide ? GO:0005737 ... P19054 38297122
    830010 8ir8:K (2.25) BS02 CLA ? GO:0005737 ... P19054 38297122
    830011 8ir8:K (2.25) BS03 CLA ? GO:0005737 ... P19054 38297122
    830012 8ir8:O (2.25) BS01 CA ? GO:0009523 ... D0VWR2 38297122
    830013 8ir8:V (2.25) BS01 HEC ? GO:0005506 ... P0A387 38297122
    830014 8ir8:Z (2.25) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    830015 8ir8:a (2.25) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    830016 8ir8:a (2.25) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    830017 8ir8:a (2.25) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    830018 8ir8:a (2.25) BS04 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    830019 8ir8:a (2.25) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    830020 8ir8:a (2.25) BS06 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    830021 8ir8:a (2.25) BS07 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    830022 8ir8:a (2.25) BS08 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    830023 8ir8:a (2.25) BS09 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    830024 8ir8:b (2.25) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    830025 8ir8:b (2.25) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    830026 8ir8:b (2.25) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    830027 8ir8:b (2.25) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    830028 8ir8:b (2.25) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    830029 8ir8:b (2.25) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    830030 8ir8:b (2.25) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    830031 8ir8:b (2.25) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    830032 8ir8:b (2.25) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    830033 8ir8:b (2.25) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    830034 8ir8:b (2.25) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    830035 8ir8:b (2.25) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    830036 8ir8:b (2.25) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    830037 8ir8:b (2.25) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    830038 8ir8:b (2.25) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    830039 8ir8:c (2.25) BS01 OEX ? GO:0005737 ... D0VWR7 38297122
    830040 8ir8:c (2.25) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    830041 8ir8:c (2.25) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    830042 8ir8:c (2.25) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    830043 8ir8:c (2.25) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    830044 8ir8:c (2.25) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    830045 8ir8:c (2.25) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    830046 8ir8:c (2.25) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    830047 8ir8:c (2.25) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    830048 8ir8:c (2.25) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    830049 8ir8:c (2.25) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    830050 8ir8:c (2.25) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    830051 8ir8:c (2.25) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    830052 8ir8:c (2.25) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    830053 8ir8:c (2.25) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    830054 8ir8:c (2.25) BS16 CA ? GO:0005737 ... D0VWR7 38297122
    830055 8ir8:d (2.25) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830056 8ir8:d (2.25) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830057 8ir8:d (2.25) BS03 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830058 8ir8:d (2.25) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830059 8ir8:d (2.25) BS05 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830060 8ir8:d (2.25) BS06 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830061 8ir8:d (2.25) BS07 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830062 8ir8:d (2.25) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830063 8ir8:d (2.25) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830064 8ir8:e (2.25) BS01 HEM ? GO:0005506 ... P12238 38297122
    830065 8ir8:f (2.25) BS01 HEM ? GO:0005506 ... P12239 38297122
    830066 8ir8:h (2.25) BS01 CLA ? GO:0009523 ... P19052 38297122
    830067 8ir8:h (2.25) BS02 CLA ? GO:0009523 ... P19052 38297122
    830068 8ir8:h (2.25) BS03 CLA ? GO:0009523 ... P19052 38297122
    830069 8ir8:h (2.25) BS04 CLA ? GO:0009523 ... P19052 38297122
    830070 8ir8:i (2.25) BS01 CLA ? GO:0005737 ... P12240 38297122
    830071 8ir8:j (2.25) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    830072 8ir8:k (2.25) BS01 peptide ? GO:0005737 ... P19054 38297122
    830073 8ir8:k (2.25) BS02 CLA ? GO:0005737 ... P19054 38297122
    830074 8ir8:k (2.25) BS03 CLA ? GO:0005737 ... P19054 38297122
    830075 8ir8:o (2.25) BS01 CA ? GO:0009523 ... D0VWR2 38297122
    830076 8ir8:v (2.25) BS01 HEC ? GO:0005506 ... P0A387 38297122
    830077 8ir8:x (2.25) BS01 CLA ? GO:0009523 ... D0VWR4 38297122
    830078 8ir8:z (2.25) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    830079 8ir9:A (2.2) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    830080 8ir9:A (2.2) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    830081 8ir9:A (2.2) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    830082 8ir9:A (2.2) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    830083 8ir9:A (2.2) BS05 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    830084 8ir9:A (2.2) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    830085 8ir9:A (2.2) BS07 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    830086 8ir9:A (2.2) BS08 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    830087 8ir9:A (2.2) BS09 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    830088 8ir9:B (2.2) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    830089 8ir9:B (2.2) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    830090 8ir9:B (2.2) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    830091 8ir9:B (2.2) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    830092 8ir9:B (2.2) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    830093 8ir9:B (2.2) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    830094 8ir9:B (2.2) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    830095 8ir9:B (2.2) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    830096 8ir9:B (2.2) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    830097 8ir9:B (2.2) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    830098 8ir9:B (2.2) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    830099 8ir9:B (2.2) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    830100 8ir9:B (2.2) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    830101 8ir9:B (2.2) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    830102 8ir9:B (2.2) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    830103 8ir9:B (2.2) BS16 CLA ? GO:0009521 ... D0VWR1 38297122
    830104 8ir9:C (2.2) BS01 OEX ? GO:0005737 ... D0VWR7 38297122
    830105 8ir9:C (2.2) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    830106 8ir9:C (2.2) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    830107 8ir9:C (2.2) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    830108 8ir9:C (2.2) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    830109 8ir9:C (2.2) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    830110 8ir9:C (2.2) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    830111 8ir9:C (2.2) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    830112 8ir9:C (2.2) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    830113 8ir9:C (2.2) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    830114 8ir9:C (2.2) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    830115 8ir9:C (2.2) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    830116 8ir9:C (2.2) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    830117 8ir9:C (2.2) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    830118 8ir9:C (2.2) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    830119 8ir9:D (2.2) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830120 8ir9:D (2.2) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830121 8ir9:D (2.2) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830122 8ir9:D (2.2) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830123 8ir9:D (2.2) BS05 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830124 8ir9:D (2.2) BS06 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830125 8ir9:D (2.2) BS07 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830126 8ir9:D (2.2) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830127 8ir9:D (2.2) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830128 8ir9:E (2.2) BS01 HEM ? GO:0005506 ... P12238 38297122
    830129 8ir9:F (2.2) BS01 HEM ? GO:0005506 ... P12239 38297122
    830130 8ir9:H (2.2) BS01 CLA ? GO:0009523 ... P19052 38297122
    830131 8ir9:H (2.2) BS02 CLA ? GO:0009523 ... P19052 38297122
    830132 8ir9:H (2.2) BS03 CLA ? GO:0009523 ... P19052 38297122
    830133 8ir9:I (2.2) BS01 CLA ? GO:0005737 ... P12240 38297122
    830134 8ir9:J (2.2) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    830135 8ir9:K (2.2) BS01 peptide ? GO:0005737 ... P19054 38297122
    830136 8ir9:K (2.2) BS02 CLA ? GO:0005737 ... P19054 38297122
    830137 8ir9:K (2.2) BS03 CLA ? GO:0005737 ... P19054 38297122
    830138 8ir9:O (2.2) BS01 CA ? GO:0009523 ... D0VWR2 38297122
    830139 8ir9:V (2.2) BS01 HEC ? GO:0005506 ... P0A387 38297122
    830140 8ir9:Z (2.2) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    830141 8ir9:a (2.2) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    830142 8ir9:a (2.2) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    830143 8ir9:a (2.2) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    830144 8ir9:a (2.2) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    830145 8ir9:a (2.2) BS05 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    830146 8ir9:a (2.2) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    830147 8ir9:a (2.2) BS07 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    830148 8ir9:a (2.2) BS08 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    830149 8ir9:a (2.2) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    830150 8ir9:b (2.2) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    830151 8ir9:b (2.2) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    830152 8ir9:b (2.2) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    830153 8ir9:b (2.2) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    830154 8ir9:b (2.2) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    830155 8ir9:b (2.2) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    830156 8ir9:b (2.2) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    830157 8ir9:b (2.2) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    830158 8ir9:b (2.2) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    830159 8ir9:b (2.2) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    830160 8ir9:b (2.2) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    830161 8ir9:b (2.2) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    830162 8ir9:b (2.2) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    830163 8ir9:b (2.2) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    830164 8ir9:b (2.2) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    830165 8ir9:c (2.2) BS01 OEX ? GO:0005737 ... D0VWR7 38297122
    830166 8ir9:c (2.2) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    830167 8ir9:c (2.2) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    830168 8ir9:c (2.2) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    830169 8ir9:c (2.2) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    830170 8ir9:c (2.2) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    830171 8ir9:c (2.2) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    830172 8ir9:c (2.2) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    830173 8ir9:c (2.2) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    830174 8ir9:c (2.2) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    830175 8ir9:c (2.2) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    830176 8ir9:c (2.2) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    830177 8ir9:c (2.2) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    830178 8ir9:c (2.2) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    830179 8ir9:c (2.2) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    830180 8ir9:c (2.2) BS16 CA ? GO:0005737 ... D0VWR7 38297122
    830181 8ir9:d (2.2) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830182 8ir9:d (2.2) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830183 8ir9:d (2.2) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830184 8ir9:d (2.2) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830185 8ir9:d (2.2) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830186 8ir9:d (2.2) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830187 8ir9:d (2.2) BS07 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830188 8ir9:d (2.2) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830189 8ir9:d (2.2) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    830190 8ir9:e (2.2) BS01 HEM ? GO:0005506 ... P12238 38297122
    830191 8ir9:f (2.2) BS01 HEM ? GO:0005506 ... P12239 38297122
    830192 8ir9:h (2.2) BS01 CLA ? GO:0009523 ... P19052 38297122
    830193 8ir9:h (2.2) BS02 CLA ? GO:0009523 ... P19052 38297122
    830194 8ir9:h (2.2) BS03 CLA ? GO:0009523 ... P19052 38297122
    830195 8ir9:h (2.2) BS04 CLA ? GO:0009523 ... P19052 38297122
    830196 8ir9:i (2.2) BS01 CLA ? GO:0005737 ... P12240 38297122
    830197 8ir9:j (2.2) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    830198 8ir9:k (2.2) BS01 peptide ? GO:0005737 ... P19054 38297122
    830199 8ir9:k (2.2) BS02 CLA ? GO:0005737 ... P19054 38297122
    830200 8ir9:k (2.2) BS03 CLA ? GO:0005737 ... P19054 38297122

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).