SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    830401 8iar:Ac (3.4) BS02 HEM N/A GO:0001666 ... P00158 39395414
    830402 8iar:Ac (3.4) BS03 U10 N/A GO:0001666 ... P00158 39395414
    830403 8iar:Ac (3.4) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    830404 8iar:Ad (3.4) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    830405 8iat:A (1.8) BS01 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830406 8iat:A (1.8) BS02 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830407 8iat:A (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830408 8iat:B (1.8) BS01 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830409 8iat:B (1.8) BS02 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830410 8iat:B (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830411 8iat:C (1.8) BS01 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830412 8iat:C (1.8) BS02 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830413 8iat:C (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830414 8iat:D (1.8) BS01 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830415 8iat:D (1.8) BS02 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830416 8iat:D (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830417 8iau:A (2.0) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830418 8iau:A (2.0) BS02 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830419 8iau:A (2.0) BS03 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830420 8iau:B (2.0) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830421 8iau:B (2.0) BS02 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830422 8iau:B (2.0) BS03 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830423 8iau:C (2.0) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830424 8iau:C (2.0) BS02 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830425 8iau:C (2.0) BS03 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830426 8iau:D (2.0) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830427 8iau:D (2.0) BS02 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830428 8iau:D (2.0) BS03 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830429 8iau:E (2.0) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830430 8iau:F (2.0) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830431 8iau:F (2.0) BS02 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830432 8iau:F (2.0) BS03 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830433 8iau:G (2.0) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830434 8iau:G (2.0) BS02 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830435 8iau:G (2.0) BS03 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830436 8iau:H (2.0) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830437 8iau:H (2.0) BS02 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830438 8iau:H (2.0) BS03 OXL 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830439 8iav:A (2.59) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830440 8iav:B (2.59) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830441 8iav:C (2.59) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830442 8iav:D (2.59) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830443 8iaw:A (2.89) BS01 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830444 8iaw:A (2.89) BS02 PEP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830445 8iaw:B (2.89) BS01 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830446 8iaw:B (2.89) BS02 PEP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830447 8iax:A (1.8) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830448 8iax:A (1.8) BS02 PEP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830449 8iax:A (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830450 8iax:B (1.8) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830451 8iax:B (1.8) BS02 PEP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830452 8iax:B (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830453 8iax:C (1.8) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830454 8iax:C (1.8) BS02 PEP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830455 8iax:C (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830456 8iax:D (1.8) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830457 8iax:D (1.8) BS02 PEP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830458 8iax:D (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830459 8iax:E (1.8) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830460 8iax:E (1.8) BS02 PEP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830461 8iax:E (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830462 8iax:F (1.8) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830463 8iax:F (1.8) BS02 PEP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830464 8iax:F (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830465 8iax:G (1.8) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830466 8iax:G (1.8) BS02 PEP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830467 8iax:G (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830468 8iax:H (1.8) BS01 FBP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830469 8iax:H (1.8) BS02 PEP 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830470 8iax:H (1.8) BS03 MG 2.7.1.40 GO:0000287 ... Q8DQ84 37286036
    830471 8iaz:A (3.0) BS01 rna N/A N/A A0ACD6BAX4 38575718
    830472 8iaz:A (3.0) BS02 dna N/A N/A A0ACD6BAX4 38575718
    830473 8iaz:A (3.0) BS03 dna N/A N/A A0ACD6BAX4 38575718
    830474 8iaz:A (3.0) BS04 ZN N/A N/A A0ACD6BAX4 38575718
    830475 8ib1:A (1.95) BS01 peptide N/A N/A N/A 37556494
    830476 8ib1:B (1.95) BS01 peptide N/A N/A N/A 37556494
    830477 8ib2:B (3.8) BS01 ADP 3.6.4.- GO:0001738 ... Q6QAQ1 37044097
    830478 8ib2:C (3.8) BS01 ADP 3.6.4.- GO:0001738 ... Q6QAQ1 37044097
    830479 8ib2:D (3.8) BS01 ADP 3.6.4.- GO:0001738 ... Q6QAQ1 37044097
    830480 8ib2:E (3.8) BS01 ADP 3.6.4.- GO:0001738 ... Q6QAQ1 37044097
    830481 8ib2:F (3.8) BS01 ADP 3.6.4.- GO:0001738 ... Q6QAQ1 37044097
    830482 8ib4:AC (4.3) BS01 HEM N/A GO:0001666 ... P00158 39395414
    830483 8ib4:AC (4.3) BS02 HEM N/A GO:0001666 ... P00158 39395414
    830484 8ib4:AC (4.3) BS03 U10 N/A GO:0001666 ... P00158 39395414
    830485 8ib4:AC (4.3) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    830486 8ib4:AD (4.3) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    830487 8ib4:Ac (4.3) BS01 HEM N/A GO:0001666 ... P00158 39395414
    830488 8ib4:Ac (4.3) BS02 HEM N/A GO:0001666 ... P00158 39395414
    830489 8ib4:Ac (4.3) BS03 U10 N/A GO:0001666 ... P00158 39395414
    830490 8ib4:Ac (4.3) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    830491 8ib4:Ad (4.3) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    830492 8ib4:B (4.3) BS01 SF4 N/A GO:0002020 ... Q9DC70 39395414
    830493 8ib4:B (4.3) BS02 UQ1 N/A GO:0002020 ... Q9DC70 39395414
    830494 8ib4:B (4.3) BS03 UQ9 N/A GO:0002020 ... Q9DC70 39395414
    830495 8ib4:D (4.3) BS01 SF4 N/A GO:0003954 ... Q91WD5 39395414
    830496 8ib4:D (4.3) BS02 UQ1 N/A GO:0003954 ... Q91WD5 39395414
    830497 8ib4:E (4.3) BS01 peptide N/A GO:0003954 ... Q9D6J6 39395414
    830498 8ib4:E (4.3) BS02 FES N/A GO:0003954 ... Q9D6J6 39395414
    830499 8ib4:F (4.3) BS01 peptide N/A GO:0005515 ... Q91YT0 39395414
    830500 8ib4:F (4.3) BS02 FMN N/A GO:0005515 ... Q91YT0 39395414
    830501 8ib4:F (4.3) BS03 SF4 N/A GO:0005515 ... Q91YT0 39395414
    830502 8ib4:G (4.3) BS01 SF4 N/A GO:0005515 ... Q91VD9 39395414
    830503 8ib4:G (4.3) BS02 SF4 N/A GO:0005515 ... Q91VD9 39395414
    830504 8ib4:G (4.3) BS03 FES N/A GO:0005515 ... Q91VD9 39395414
    830505 8ib4:H (4.3) BS01 UQ9 N/A GO:0001666 ... P03888 39395414
    830506 8ib4:I (4.3) BS01 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    830507 8ib4:I (4.3) BS02 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    830508 8ib4:O (4.3) BS01 ADP N/A GO:0005737 ... Q99LC3 39395414
    830509 8ib4:P (4.3) BS01 NDP N/A GO:0003954 ... Q9DC69 39395414
    830510 8ib4:R (4.3) BS01 ZN N/A GO:0001822 ... P52503 39395414
    830511 8ib4:W (4.3) BS01 EHZ N/A GO:0003674 ... Q9CQZ5 39395414
    830512 8ib4:n (4.3) BS01 EHZ N/A GO:0005739 ... Q9CQJ8 39395414
    830513 8ib5:B (3.3) BS01 SF4 N/A GO:0002020 ... Q9DC70 39395414
    830514 8ib5:B (3.3) BS02 UQ1 N/A GO:0002020 ... Q9DC70 39395414
    830515 8ib5:B (3.3) BS03 UQ9 N/A GO:0002020 ... Q9DC70 39395414
    830516 8ib5:D (3.3) BS01 SF4 N/A GO:0003954 ... Q91WD5 39395414
    830517 8ib5:D (3.3) BS02 UQ1 N/A GO:0003954 ... Q91WD5 39395414
    830518 8ib5:E (3.3) BS01 peptide N/A GO:0003954 ... Q9D6J6 39395414
    830519 8ib5:E (3.3) BS02 FES N/A GO:0003954 ... Q9D6J6 39395414
    830520 8ib5:F (3.3) BS01 peptide N/A GO:0005515 ... Q91YT0 39395414
    830521 8ib5:F (3.3) BS02 FMN N/A GO:0005515 ... Q91YT0 39395414
    830522 8ib5:F (3.3) BS03 SF4 N/A GO:0005515 ... Q91YT0 39395414
    830523 8ib5:G (3.3) BS01 SF4 N/A GO:0005515 ... Q91VD9 39395414
    830524 8ib5:G (3.3) BS02 SF4 N/A GO:0005515 ... Q91VD9 39395414
    830525 8ib5:G (3.3) BS03 FES N/A GO:0005515 ... Q91VD9 39395414
    830526 8ib5:H (3.3) BS01 UQ9 N/A GO:0001666 ... P03888 39395414
    830527 8ib5:I (3.3) BS01 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    830528 8ib5:I (3.3) BS02 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    830529 8ib5:P (3.3) BS01 NDP N/A GO:0003954 ... Q9DC69 39395414
    830530 8ib5:R (3.3) BS01 ZN N/A GO:0001822 ... P52503 39395414
    830531 8ib5:W (3.3) BS01 EHZ N/A GO:0003674 ... Q9CQZ5 39395414
    830532 8ib6:M (3.3) BS01 peptide N/A GO:0001666 ... P03911 39395414
    830533 8ib6:N (3.3) BS01 peptide N/A GO:0005739 ... P03893 39395414
    830534 8ib6:O (3.3) BS01 ADP N/A GO:0005737 ... Q99LC3 39395414
    830535 8ib6:d (3.3) BS01 peptide N/A GO:0005737 ... Q9CQ54 39395414
    830536 8ib6:e (3.3) BS01 peptide N/A GO:0003674 ... Q99LY9 39395414
    830537 8ib6:h (3.3) BS01 peptide N/A GO:0003674 ... Q9CQH3 39395414
    830538 8ib6:n (3.3) BS01 EHZ N/A GO:0005739 ... Q9CQJ8 39395414
    830539 8ib7:AC (3.4) BS01 HEM N/A GO:0001666 ... P00158 39395414
    830540 8ib7:AC (3.4) BS02 HEM N/A GO:0001666 ... P00158 39395414
    830541 8ib7:AC (3.4) BS03 U10 N/A GO:0001666 ... P00158 39395414
    830542 8ib7:AC (3.4) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    830543 8ib7:AD (3.4) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    830544 8ib7:Ac (3.4) BS01 HEM N/A GO:0001666 ... P00158 39395414
    830545 8ib7:Ac (3.4) BS02 HEM N/A GO:0001666 ... P00158 39395414
    830546 8ib7:Ac (3.4) BS03 U10 N/A GO:0001666 ... P00158 39395414
    830547 8ib7:Ac (3.4) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    830548 8ib7:Ad (3.4) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    830549 8ib9:AC (4.3) BS01 HEM N/A GO:0001666 ... P00158 39395414
    830550 8ib9:AC (4.3) BS02 HEM N/A GO:0001666 ... P00158 39395414
    830551 8ib9:AC (4.3) BS03 U10 N/A GO:0001666 ... P00158 39395414
    830552 8ib9:AC (4.3) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    830553 8ib9:AD (4.3) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    830554 8ib9:Ac (4.3) BS01 HEM N/A GO:0001666 ... P00158 39395414
    830555 8ib9:Ac (4.3) BS02 HEM N/A GO:0001666 ... P00158 39395414
    830556 8ib9:Ac (4.3) BS03 U10 N/A GO:0001666 ... P00158 39395414
    830557 8ib9:Ac (4.3) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    830558 8ib9:Ad (4.3) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    830559 8ib9:B (4.3) BS01 SF4 N/A GO:0002020 ... Q9DC70 39395414
    830560 8ib9:B (4.3) BS02 UQ1 N/A GO:0002020 ... Q9DC70 39395414
    830561 8ib9:D (4.3) BS01 SF4 N/A GO:0003954 ... Q91WD5 39395414
    830562 8ib9:D (4.3) BS02 UQ1 N/A GO:0003954 ... Q91WD5 39395414
    830563 8ib9:E (4.3) BS01 peptide N/A GO:0003954 ... Q9D6J6 39395414
    830564 8ib9:E (4.3) BS02 FES N/A GO:0003954 ... Q9D6J6 39395414
    830565 8ib9:F (4.3) BS01 peptide N/A GO:0005515 ... Q91YT0 39395414
    830566 8ib9:F (4.3) BS02 FMN N/A GO:0005515 ... Q91YT0 39395414
    830567 8ib9:F (4.3) BS03 SF4 N/A GO:0005515 ... Q91YT0 39395414
    830568 8ib9:G (4.3) BS01 SF4 N/A GO:0005515 ... Q91VD9 39395414
    830569 8ib9:G (4.3) BS02 SF4 N/A GO:0005515 ... Q91VD9 39395414
    830570 8ib9:G (4.3) BS03 FES N/A GO:0005515 ... Q91VD9 39395414
    830571 8ib9:H (4.3) BS01 UQ9 N/A GO:0001666 ... P03888 39395414
    830572 8ib9:I (4.3) BS01 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    830573 8ib9:I (4.3) BS02 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    830574 8ib9:O (4.3) BS01 ADP N/A GO:0005737 ... Q99LC3 39395414
    830575 8ib9:P (4.3) BS01 NDP N/A GO:0003954 ... Q9DC69 39395414
    830576 8ib9:R (4.3) BS01 ZN N/A GO:0001822 ... P52503 39395414
    830577 8ib9:W (4.3) BS01 EHZ N/A GO:0003674 ... Q9CQZ5 39395414
    830578 8ib9:n (4.3) BS01 EHZ N/A GO:0005739 ... Q9CQJ8 39395414
    830579 8iba:B (3.2) BS01 SF4 N/A GO:0002020 ... Q9DC70 39395414
    830580 8iba:B (3.2) BS02 UQ1 N/A GO:0002020 ... Q9DC70 39395414
    830581 8iba:D (3.2) BS01 SF4 N/A GO:0003954 ... Q91WD5 39395414
    830582 8iba:D (3.2) BS02 UQ1 N/A GO:0003954 ... Q91WD5 39395414
    830583 8iba:E (3.2) BS01 peptide N/A GO:0003954 ... Q9D6J6 39395414
    830584 8iba:E (3.2) BS02 FES N/A GO:0003954 ... Q9D6J6 39395414
    830585 8iba:F (3.2) BS01 peptide N/A GO:0005515 ... Q91YT0 39395414
    830586 8iba:F (3.2) BS02 FMN N/A GO:0005515 ... Q91YT0 39395414
    830587 8iba:F (3.2) BS03 SF4 N/A GO:0005515 ... Q91YT0 39395414
    830588 8iba:G (3.2) BS01 SF4 N/A GO:0005515 ... Q91VD9 39395414
    830589 8iba:G (3.2) BS02 SF4 N/A GO:0005515 ... Q91VD9 39395414
    830590 8iba:G (3.2) BS03 FES N/A GO:0005515 ... Q91VD9 39395414
    830591 8iba:H (3.2) BS01 UQ9 N/A GO:0001666 ... P03888 39395414
    830592 8iba:I (3.2) BS01 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    830593 8iba:I (3.2) BS02 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    830594 8iba:P (3.2) BS01 NDP N/A GO:0003954 ... Q9DC69 39395414
    830595 8iba:R (3.2) BS01 ZN N/A GO:0001822 ... P52503 39395414
    830596 8iba:W (3.2) BS01 EHZ N/A GO:0003674 ... Q9CQZ5 39395414
    830597 8ibb:M (3.3) BS01 peptide N/A GO:0001666 ... P03911 39395414
    830598 8ibb:N (3.3) BS01 peptide N/A GO:0005739 ... P03893 39395414
    830599 8ibb:O (3.3) BS01 ADP N/A GO:0005737 ... Q99LC3 39395414
    830600 8ibb:d (3.3) BS01 peptide N/A GO:0005737 ... Q9CQ54 39395414

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).