SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    830601 8ibb:e (3.3) BS01 peptide N/A GO:0003674 ... Q99LY9 39395414
    830602 8ibb:h (3.3) BS01 peptide N/A GO:0003674 ... Q9CQH3 39395414
    830603 8ibb:n (3.3) BS01 EHZ N/A GO:0005739 ... Q9CQJ8 39395414
    830604 8ibc:AC (3.6) BS01 HEM N/A GO:0001666 ... P00158 39395414
    830605 8ibc:AC (3.6) BS02 HEM N/A GO:0001666 ... P00158 39395414
    830606 8ibc:AC (3.6) BS03 U10 N/A GO:0001666 ... P00158 39395414
    830607 8ibc:AC (3.6) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    830608 8ibc:AD (3.6) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    830609 8ibc:Ac (3.6) BS01 HEM N/A GO:0001666 ... P00158 39395414
    830610 8ibc:Ac (3.6) BS02 HEM N/A GO:0001666 ... P00158 39395414
    830611 8ibc:Ac (3.6) BS03 U10 N/A GO:0001666 ... P00158 39395414
    830612 8ibc:Ac (3.6) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    830613 8ibc:Ad (3.6) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    830614 8ibd:AA (4.2) BS01 peptide N/A GO:0005515 ... Q9CZ13 39395414
    830615 8ibd:AB (4.2) BS01 peptide N/A GO:0004222 ... Q9DB77 39395414
    830616 8ibd:AC (4.2) BS01 HEM N/A GO:0001666 ... P00158 39395414
    830617 8ibd:AC (4.2) BS02 HEM N/A GO:0001666 ... P00158 39395414
    830618 8ibd:AC (4.2) BS03 UQ6 N/A GO:0001666 ... P00158 39395414
    830619 8ibd:AD (4.2) BS01 peptide N/A GO:0005515 ... Q9D0M3 39395414
    830620 8ibd:AD (4.2) BS02 HEC N/A GO:0005515 ... Q9D0M3 39395414
    830621 8ibd:AE (4.2) BS01 peptide N/A GO:0005515 ... Q9CR68 39395414
    830622 8ibd:AE (4.2) BS02 peptide N/A GO:0005515 ... Q9CR68 39395414
    830623 8ibd:Aa (4.2) BS01 peptide N/A GO:0005515 ... Q9CZ13 39395414
    830624 8ibd:Ab (4.2) BS01 peptide N/A GO:0004222 ... Q9DB77 39395414
    830625 8ibd:Ac (4.2) BS01 HEM N/A GO:0001666 ... P00158 39395414
    830626 8ibd:Ac (4.2) BS02 HEM N/A GO:0001666 ... P00158 39395414
    830627 8ibd:Ac (4.2) BS03 U10 N/A GO:0001666 ... P00158 39395414
    830628 8ibd:Ac (4.2) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    830629 8ibd:Ad (4.2) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    830630 8ibd:B (4.2) BS01 SF4 N/A GO:0002020 ... Q9DC70 39395414
    830631 8ibd:B (4.2) BS02 UQ1 N/A GO:0002020 ... Q9DC70 39395414
    830632 8ibd:E (4.2) BS01 peptide N/A GO:0003954 ... Q9D6J6 39395414
    830633 8ibd:E (4.2) BS02 FES N/A GO:0003954 ... Q9D6J6 39395414
    830634 8ibd:F (4.2) BS01 peptide N/A GO:0005515 ... Q91YT0 39395414
    830635 8ibd:F (4.2) BS02 FMN N/A GO:0005515 ... Q91YT0 39395414
    830636 8ibd:F (4.2) BS03 SF4 N/A GO:0005515 ... Q91YT0 39395414
    830637 8ibd:G (4.2) BS01 SF4 N/A GO:0005515 ... Q91VD9 39395414
    830638 8ibd:G (4.2) BS02 SF4 N/A GO:0005515 ... Q91VD9 39395414
    830639 8ibd:G (4.2) BS03 FES N/A GO:0005515 ... Q91VD9 39395414
    830640 8ibd:H (4.2) BS01 UQ9 N/A GO:0001666 ... P03888 39395414
    830641 8ibd:I (4.2) BS01 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    830642 8ibd:I (4.2) BS02 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    830643 8ibd:O (4.2) BS01 ADP N/A GO:0005737 ... Q99LC3 39395414
    830644 8ibd:P (4.2) BS01 NDP N/A GO:0003954 ... Q9DC69 39395414
    830645 8ibd:R (4.2) BS01 ZN N/A GO:0001822 ... P52503 39395414
    830646 8ibd:W (4.2) BS01 EHZ N/A GO:0003674 ... Q9CQZ5 39395414
    830647 8ibd:n (4.2) BS01 EHZ N/A GO:0005739 ... Q9CQJ8 39395414
    830648 8ibe:B (3.3) BS01 SF4 N/A GO:0002020 ... Q9DC70 39395414
    830649 8ibe:B (3.3) BS02 UQ1 N/A GO:0002020 ... Q9DC70 39395414
    830650 8ibe:E (3.3) BS01 peptide N/A GO:0003954 ... Q9D6J6 39395414
    830651 8ibe:E (3.3) BS02 FES N/A GO:0003954 ... Q9D6J6 39395414
    830652 8ibe:F (3.3) BS01 peptide N/A GO:0005515 ... Q91YT0 39395414
    830653 8ibe:F (3.3) BS02 FMN N/A GO:0005515 ... Q91YT0 39395414
    830654 8ibe:F (3.3) BS03 SF4 N/A GO:0005515 ... Q91YT0 39395414
    830655 8ibe:G (3.3) BS01 SF4 N/A GO:0005515 ... Q91VD9 39395414
    830656 8ibe:G (3.3) BS02 SF4 N/A GO:0005515 ... Q91VD9 39395414
    830657 8ibe:G (3.3) BS03 FES N/A GO:0005515 ... Q91VD9 39395414
    830658 8ibe:H (3.3) BS01 UQ9 N/A GO:0001666 ... P03888 39395414
    830659 8ibe:I (3.3) BS01 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    830660 8ibe:I (3.3) BS02 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    830661 8ibe:P (3.3) BS01 NDP N/A GO:0003954 ... Q9DC69 39395414
    830662 8ibe:R (3.3) BS01 ZN N/A GO:0001822 ... P52503 39395414
    830663 8ibe:W (3.3) BS01 EHZ N/A GO:0003674 ... Q9CQZ5 39395414
    830664 8ibf:M (3.3) BS01 peptide N/A GO:0001666 ... P03911 39395414
    830665 8ibf:N (3.3) BS01 peptide N/A GO:0005739 ... P03893 39395414
    830666 8ibf:O (3.3) BS01 ADP N/A GO:0005737 ... Q99LC3 39395414
    830667 8ibf:d (3.3) BS01 peptide N/A GO:0005737 ... Q9CQ54 39395414
    830668 8ibf:e (3.3) BS01 peptide N/A GO:0003674 ... Q99LY9 39395414
    830669 8ibf:h (3.3) BS01 peptide N/A GO:0003674 ... Q9CQH3 39395414
    830670 8ibf:n (3.3) BS01 EHZ N/A GO:0005739 ... Q9CQJ8 39395414
    830671 8ibg:AA (3.8) BS01 peptide N/A GO:0005515 ... Q9CZ13 39395414
    830672 8ibg:AB (3.8) BS01 peptide N/A GO:0004222 ... Q9DB77 39395414
    830673 8ibg:AC (3.8) BS01 HEM N/A GO:0001666 ... P00158 39395414
    830674 8ibg:AC (3.8) BS02 HEM N/A GO:0001666 ... P00158 39395414
    830675 8ibg:AC (3.8) BS03 UQ6 N/A GO:0001666 ... P00158 39395414
    830676 8ibg:AD (3.8) BS01 peptide N/A GO:0005515 ... Q9D0M3 39395414
    830677 8ibg:AD (3.8) BS02 HEC N/A GO:0005515 ... Q9D0M3 39395414
    830678 8ibg:AE (3.8) BS01 peptide N/A GO:0005515 ... Q9CR68 39395414
    830679 8ibg:AE (3.8) BS02 peptide N/A GO:0005515 ... Q9CR68 39395414
    830680 8ibg:Aa (3.8) BS01 peptide N/A GO:0005515 ... Q9CZ13 39395414
    830681 8ibg:Ab (3.8) BS01 peptide N/A GO:0004222 ... Q9DB77 39395414
    830682 8ibg:Ac (3.8) BS01 HEM N/A GO:0001666 ... P00158 39395414
    830683 8ibg:Ac (3.8) BS02 HEM N/A GO:0001666 ... P00158 39395414
    830684 8ibg:Ac (3.8) BS03 U10 N/A GO:0001666 ... P00158 39395414
    830685 8ibg:Ac (3.8) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    830686 8ibg:Ad (3.8) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    830687 8ibk:A (1.69) BS01 GLC ? GO:0004553 ... A0ACD6B9E0 37049872
    830688 8ibk:A (1.69) BS02 GLC ? GO:0004553 ... A0ACD6B9E0 37049872
    830689 8ibk:A (1.69) BS03 GLC ? GO:0004553 ... A0ACD6B9E0 37049872
    830690 8ibk:A (1.69) BS04 CA ? GO:0004553 ... A0ACD6B9E0 37049872
    830691 8ibk:A (1.69) BS05 CA ? GO:0004553 ... A0ACD6B9E0 37049872
    830692 8ibl:A (2.6) BS01 CA 3.1.1.74 N/A W0TJ64 N/A
    830693 8ibl:B (2.6) BS01 CA 3.1.1.74 N/A W0TJ64 N/A
    830694 8ibm:A (2.2) BS01 CA 3.1.1.74 N/A W0TJ64 N/A
    830695 8ibm:B (2.2) BS01 CA 3.1.1.74 N/A W0TJ64 N/A
    830696 8ibn:A (3.03) BS01 G2P ? GO:0003924 ... W9BCK7 37429870
    830697 8ibn:B (3.03) BS01 G2P ? GO:0003924 ... W9BCK7 37429870
    830698 8ibn:C (3.03) BS01 G2P ? GO:0003924 ... W9BCK7 37429870
    830699 8ibn:D (3.03) BS01 G2P ? GO:0003924 ... W9BCK7 37429870
    830700 8ibo:A (1.83) BS01 peptide ? N/A P9WPC9 37683752
    830701 8ibp:A (1.45) BS01 peptide ? N/A P9WPC9 37683752
    830702 8ibq:A (1.45) BS01 OWO ? N/A O60885 37382379
    830703 8ibs:A (1.9) BS01 GLA 3.2.1.23 GO:0004565 ... Q93GI5 38046823
    830704 8ibs:B (1.9) BS01 GLA 3.2.1.23 GO:0004565 ... Q93GI5 38046823
    830705 8ibs:C (1.9) BS01 GLA 3.2.1.23 GO:0004565 ... Q93GI5 38046823
    830706 8ibs:D (1.9) BS01 GLA 3.2.1.23 GO:0004565 ... Q93GI5 38046823
    830707 8ibs:E (1.9) BS01 GLA 3.2.1.23 GO:0004565 ... Q93GI5 38046823
    830708 8ibs:F (1.9) BS01 GLA 3.2.1.23 GO:0004565 ... Q93GI5 38046823
    830709 8ibt:A (2.2) BS01 GAL 3.2.1.23 GO:0004565 ... Q93GI5 38046823
    830710 8ibt:B (2.2) BS01 GAL 3.2.1.23 GO:0004565 ... Q93GI5 38046823
    830711 8ibt:B (2.2) BS02 GAL 3.2.1.23 GO:0004565 ... Q93GI5 38046823
    830712 8ibu:R (3.51) BS01 ERY ? GO:0004930 ... O43193
    P0ABE7
    36921049
    830713 8ibv:R (3.19) BS01 peptide ? GO:0004930 ... O43193
    P0ABE7
    36921049
    830714 8ibw:C (3.6) BS01 dna ? GO:0071897 ... V9H052 37301196
    830715 8ibw:C (3.6) BS02 dna ? GO:0071897 ... V9H052 37301196
    830716 8ibw:C (3.6) BS03 rna ? GO:0071897 ... V9H052 37301196
    830717 8ibw:C (3.6) BS04 ZN ? GO:0071897 ... V9H052 37301196
    830718 8ibw:C (3.6) BS05 ZN ? GO:0071897 ... V9H052 37301196
    830719 8ibx:C (3.74) BS01 dna ? GO:0071897 ... V9H052 37301196
    830720 8ibx:C (3.74) BS02 dna ? GO:0071897 ... V9H052 37301196
    830721 8ibx:C (3.74) BS03 rna ? GO:0071897 ... V9H052 37301196
    830722 8ibx:C (3.74) BS04 ZN ? GO:0071897 ... V9H052 37301196
    830723 8ibx:C (3.74) BS05 ZN ? GO:0071897 ... V9H052 37301196
    830724 8iby:C (3.47) BS01 rna ? GO:0071897 ... V9H052 37301196
    830725 8iby:C (3.47) BS02 ZN ? GO:0071897 ... V9H052 37301196
    830726 8ibz:C (3.04) BS01 rna ? GO:0071897 ... V9H052 37301196
    830727 8ibz:C (3.04) BS02 ZN ? GO:0071897 ... V9H052 37301196
    830728 8ic1:A (1.8) BS01 BXY N/A N/A A0AAJ6N6D4 37726269
    830729 8ic1:A (1.8) BS02 BXY N/A N/A A0AAJ6N6D4 37726269
    830730 8ic1:A (1.8) BS03 BXY N/A N/A A0AAJ6N6D4 37726269
    830731 8ic1:A (1.8) BS04 BXY N/A N/A A0AAJ6N6D4 37726269
    830732 8ic1:A (1.8) BS05 BXY N/A N/A A0AAJ6N6D4 37726269
    830733 8ic1:A (1.8) BS06 BXY N/A N/A A0AAJ6N6D4 37726269
    830734 8ic1:A (1.8) BS07 BXY N/A N/A A0AAJ6N6D4 37726269
    830735 8ic1:A (1.8) BS08 BXY N/A N/A A0AAJ6N6D4 37726269
    830736 8ic1:A (1.8) BS09 CA N/A N/A A0AAJ6N6D4 37726269
    830737 8ic1:A (1.8) BS10 OYO N/A N/A A0AAJ6N6D4 37726269
    830738 8ic1:B (1.8) BS01 BXY N/A N/A A0AAJ6N6D4 37726269
    830739 8ic1:B (1.8) BS02 BXY N/A N/A A0AAJ6N6D4 37726269
    830740 8ic1:B (1.8) BS03 BXY N/A N/A A0AAJ6N6D4 37726269
    830741 8ic1:B (1.8) BS04 CA N/A N/A A0AAJ6N6D4 37726269
    830742 8ic1:B (1.8) BS05 OYO N/A N/A A0AAJ6N6D4 37726269
    830743 8ic1:C (1.8) BS01 BXY N/A N/A A0AAJ6N6D4 37726269
    830744 8ic1:C (1.8) BS02 BXY N/A N/A A0AAJ6N6D4 37726269
    830745 8ic1:C (1.8) BS03 BXY N/A N/A A0AAJ6N6D4 37726269
    830746 8ic1:C (1.8) BS04 BXY N/A N/A A0AAJ6N6D4 37726269
    830747 8ic1:C (1.8) BS05 BXY N/A N/A A0AAJ6N6D4 37726269
    830748 8ic1:C (1.8) BS06 BXY N/A N/A A0AAJ6N6D4 37726269
    830749 8ic1:C (1.8) BS07 BXY N/A N/A A0AAJ6N6D4 37726269
    830750 8ic1:C (1.8) BS08 BXY N/A N/A A0AAJ6N6D4 37726269
    830751 8ic1:C (1.8) BS09 CA N/A N/A A0AAJ6N6D4 37726269
    830752 8ic1:C (1.8) BS10 OYO N/A N/A A0AAJ6N6D4 37726269
    830753 8ic1:D (1.8) BS01 BXY N/A N/A A0AAJ6N6D4 37726269
    830754 8ic1:D (1.8) BS02 BXY N/A N/A A0AAJ6N6D4 37726269
    830755 8ic1:D (1.8) BS03 BXY N/A N/A A0AAJ6N6D4 37726269
    830756 8ic1:D (1.8) BS04 CA N/A N/A A0AAJ6N6D4 37726269
    830757 8ic1:D (1.8) BS05 OYO N/A N/A A0AAJ6N6D4 37726269
    830758 8ic2:AC (6.3) BS01 HEM N/A GO:0001666 ... P00158 39395414
    830759 8ic2:AC (6.3) BS02 HEM N/A GO:0001666 ... P00158 39395414
    830760 8ic2:AC (6.3) BS03 UQ6 N/A GO:0001666 ... P00158 39395414
    830761 8ic2:AD (6.3) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    830762 8ic2:Ac (6.3) BS01 HEM N/A GO:0001666 ... P00158 39395414
    830763 8ic2:Ac (6.3) BS02 HEM N/A GO:0001666 ... P00158 39395414
    830764 8ic2:Ac (6.3) BS03 U10 N/A GO:0001666 ... P00158 39395414
    830765 8ic2:Ac (6.3) BS04 UQ6 N/A GO:0001666 ... P00158 39395414
    830766 8ic2:Ad (6.3) BS01 HEC N/A GO:0005515 ... Q9D0M3 39395414
    830767 8ic2:B (6.3) BS01 SF4 N/A GO:0002020 ... Q9DC70 39395414
    830768 8ic2:B (6.3) BS02 UQ1 N/A GO:0002020 ... Q9DC70 39395414
    830769 8ic2:B (6.3) BS03 UQ9 N/A GO:0002020 ... Q9DC70 39395414
    830770 8ic2:D (6.3) BS01 SF4 N/A GO:0003954 ... Q91WD5 39395414
    830771 8ic2:E (6.3) BS01 peptide N/A GO:0003954 ... Q9D6J6 39395414
    830772 8ic2:E (6.3) BS02 FES N/A GO:0003954 ... Q9D6J6 39395414
    830773 8ic2:F (6.3) BS01 peptide N/A GO:0005515 ... Q91YT0 39395414
    830774 8ic2:F (6.3) BS02 FMN N/A GO:0005515 ... Q91YT0 39395414
    830775 8ic2:F (6.3) BS03 SF4 N/A GO:0005515 ... Q91YT0 39395414
    830776 8ic2:G (6.3) BS01 SF4 N/A GO:0005515 ... Q91VD9 39395414
    830777 8ic2:G (6.3) BS02 SF4 N/A GO:0005515 ... Q91VD9 39395414
    830778 8ic2:G (6.3) BS03 FES N/A GO:0005515 ... Q91VD9 39395414
    830779 8ic2:H (6.3) BS01 UQ9 N/A GO:0001666 ... P03888 39395414
    830780 8ic2:I (6.3) BS01 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    830781 8ic2:I (6.3) BS02 SF4 N/A GO:0003954 ... Q8K3J1 39395414
    830782 8ic2:O (6.3) BS01 ADP N/A GO:0005737 ... Q99LC3 39395414
    830783 8ic2:P (6.3) BS01 NDP N/A GO:0003954 ... Q9DC69 39395414
    830784 8ic2:Q (6.3) BS01 peptide N/A GO:0001932 ... Q9CXZ1 39395414
    830785 8ic2:R (6.3) BS01 ZN N/A GO:0001822 ... P52503 39395414
    830786 8ic2:W (6.3) BS01 EHZ N/A GO:0003674 ... Q9CQZ5 39395414
    830787 8ic2:n (6.3) BS01 EHZ N/A GO:0005739 ... Q9CQJ8 39395414
    830788 8ic3:B (3.2) BS01 SF4 N/A GO:0002020 ... Q9DC70 39395414
    830789 8ic3:B (3.2) BS02 UQ1 N/A GO:0002020 ... Q9DC70 39395414
    830790 8ic3:B (3.2) BS03 UQ9 N/A GO:0002020 ... Q9DC70 39395414
    830791 8ic3:D (3.2) BS01 SF4 N/A GO:0003954 ... Q91WD5 39395414
    830792 8ic3:E (3.2) BS01 peptide N/A GO:0003954 ... Q9D6J6 39395414
    830793 8ic3:E (3.2) BS02 FES N/A GO:0003954 ... Q9D6J6 39395414
    830794 8ic3:F (3.2) BS01 peptide N/A GO:0005515 ... Q91YT0 39395414
    830795 8ic3:F (3.2) BS02 FMN N/A GO:0005515 ... Q91YT0 39395414
    830796 8ic3:F (3.2) BS03 SF4 N/A GO:0005515 ... Q91YT0 39395414
    830797 8ic3:G (3.2) BS01 SF4 N/A GO:0005515 ... Q91VD9 39395414
    830798 8ic3:G (3.2) BS02 SF4 N/A GO:0005515 ... Q91VD9 39395414
    830799 8ic3:G (3.2) BS03 FES N/A GO:0005515 ... Q91VD9 39395414
    830800 8ic3:H (3.2) BS01 UQ9 N/A GO:0001666 ... P03888 39395414

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).