SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    831001 8irg:D (2.3) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831002 8irg:D (2.3) BS04 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831003 8irg:D (2.3) BS05 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831004 8irg:D (2.3) BS06 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831005 8irg:D (2.3) BS07 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831006 8irg:D (2.3) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831007 8irg:D (2.3) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831008 8irg:E (2.3) BS01 HEM ? GO:0005506 ... P12238 38297122
    831009 8irg:F (2.3) BS01 HEM ? GO:0005506 ... P12239 38297122
    831010 8irg:H (2.3) BS01 CLA ? GO:0009523 ... P19052 38297122
    831011 8irg:H (2.3) BS02 CLA ? GO:0009523 ... P19052 38297122
    831012 8irg:H (2.3) BS03 CLA ? GO:0009523 ... P19052 38297122
    831013 8irg:I (2.3) BS01 CLA ? GO:0005737 ... P12240 38297122
    831014 8irg:J (2.3) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    831015 8irg:K (2.3) BS01 peptide ? GO:0005737 ... P19054 38297122
    831016 8irg:K (2.3) BS02 CLA ? GO:0005737 ... P19054 38297122
    831017 8irg:K (2.3) BS03 CLA ? GO:0005737 ... P19054 38297122
    831018 8irg:O (2.3) BS01 CA ? GO:0009523 ... D0VWR2 38297122
    831019 8irg:V (2.3) BS01 HEC ? GO:0005506 ... P0A387 38297122
    831020 8irg:Z (2.3) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    831021 8irg:a (2.3) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    831022 8irg:a (2.3) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    831023 8irg:a (2.3) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    831024 8irg:a (2.3) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    831025 8irg:a (2.3) BS05 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    831026 8irg:a (2.3) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    831027 8irg:a (2.3) BS07 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    831028 8irg:a (2.3) BS08 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    831029 8irg:a (2.3) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    831030 8irg:b (2.3) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    831031 8irg:b (2.3) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    831032 8irg:b (2.3) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    831033 8irg:b (2.3) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    831034 8irg:b (2.3) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    831035 8irg:b (2.3) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    831036 8irg:b (2.3) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    831037 8irg:b (2.3) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    831038 8irg:b (2.3) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    831039 8irg:b (2.3) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    831040 8irg:b (2.3) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    831041 8irg:b (2.3) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    831042 8irg:b (2.3) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    831043 8irg:b (2.3) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    831044 8irg:b (2.3) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    831045 8irg:c (2.3) BS01 OEX ? GO:0005737 ... D0VWR7 38297122
    831046 8irg:c (2.3) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    831047 8irg:c (2.3) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    831048 8irg:c (2.3) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    831049 8irg:c (2.3) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    831050 8irg:c (2.3) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    831051 8irg:c (2.3) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    831052 8irg:c (2.3) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    831053 8irg:c (2.3) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    831054 8irg:c (2.3) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    831055 8irg:c (2.3) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    831056 8irg:c (2.3) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    831057 8irg:c (2.3) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    831058 8irg:c (2.3) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    831059 8irg:c (2.3) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    831060 8irg:c (2.3) BS16 CA ? GO:0005737 ... D0VWR7 38297122
    831061 8irg:d (2.3) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831062 8irg:d (2.3) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831063 8irg:d (2.3) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831064 8irg:d (2.3) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831065 8irg:d (2.3) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831066 8irg:d (2.3) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831067 8irg:d (2.3) BS07 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831068 8irg:d (2.3) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831069 8irg:d (2.3) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831070 8irg:e (2.3) BS01 HEM ? GO:0005506 ... P12238 38297122
    831071 8irg:f (2.3) BS01 HEM ? GO:0005506 ... P12239 38297122
    831072 8irg:h (2.3) BS01 CLA ? GO:0009523 ... P19052 38297122
    831073 8irg:h (2.3) BS02 CLA ? GO:0009523 ... P19052 38297122
    831074 8irg:h (2.3) BS03 CLA ? GO:0009523 ... P19052 38297122
    831075 8irg:h (2.3) BS04 CLA ? GO:0009523 ... P19052 38297122
    831076 8irg:i (2.3) BS01 CLA ? GO:0005737 ... P12240 38297122
    831077 8irg:j (2.3) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    831078 8irg:k (2.3) BS01 peptide ? GO:0005737 ... P19054 38297122
    831079 8irg:k (2.3) BS02 CLA ? GO:0005737 ... P19054 38297122
    831080 8irg:k (2.3) BS03 CLA ? GO:0005737 ... P19054 38297122
    831081 8irg:o (2.3) BS01 CA ? GO:0009523 ... D0VWR2 38297122
    831082 8irg:v (2.3) BS01 HEC ? GO:0005506 ... P0A387 38297122
    831083 8irg:z (2.3) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    831084 8irh:A (2.25) BS01 OEY 1.10.3.9 GO:0005506 ... P51765 38297122
    831085 8irh:A (2.25) BS02 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    831086 8irh:A (2.25) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    831087 8irh:A (2.25) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    831088 8irh:A (2.25) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    831089 8irh:A (2.25) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    831090 8irh:A (2.25) BS07 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    831091 8irh:A (2.25) BS08 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    831092 8irh:A (2.25) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    831093 8irh:A (2.25) BS10 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    831094 8irh:B (2.25) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    831095 8irh:B (2.25) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    831096 8irh:B (2.25) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    831097 8irh:B (2.25) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    831098 8irh:B (2.25) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    831099 8irh:B (2.25) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    831100 8irh:B (2.25) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    831101 8irh:B (2.25) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    831102 8irh:B (2.25) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    831103 8irh:B (2.25) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    831104 8irh:B (2.25) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    831105 8irh:B (2.25) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    831106 8irh:B (2.25) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    831107 8irh:B (2.25) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    831108 8irh:B (2.25) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    831109 8irh:B (2.25) BS16 CLA ? GO:0009521 ... D0VWR1 38297122
    831110 8irh:C (2.25) BS01 OEY ? GO:0005737 ... D0VWR7 38297122
    831111 8irh:C (2.25) BS02 OEX ? GO:0005737 ... D0VWR7 38297122
    831112 8irh:C (2.25) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    831113 8irh:C (2.25) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    831114 8irh:C (2.25) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    831115 8irh:C (2.25) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    831116 8irh:C (2.25) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    831117 8irh:C (2.25) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    831118 8irh:C (2.25) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    831119 8irh:C (2.25) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    831120 8irh:C (2.25) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    831121 8irh:C (2.25) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    831122 8irh:C (2.25) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    831123 8irh:C (2.25) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    831124 8irh:C (2.25) BS15 CLA ? GO:0005737 ... D0VWR7 38297122
    831125 8irh:C (2.25) BS16 CA ? GO:0005737 ... D0VWR7 38297122
    831126 8irh:D (2.25) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831127 8irh:D (2.25) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831128 8irh:D (2.25) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831129 8irh:D (2.25) BS04 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831130 8irh:D (2.25) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831131 8irh:D (2.25) BS06 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831132 8irh:D (2.25) BS07 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831133 8irh:D (2.25) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831134 8irh:D (2.25) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831135 8irh:E (2.25) BS01 HEM ? GO:0005506 ... P12238 38297122
    831136 8irh:F (2.25) BS01 HEM ? GO:0005506 ... P12239 38297122
    831137 8irh:H (2.25) BS01 CLA ? GO:0009523 ... P19052 38297122
    831138 8irh:H (2.25) BS02 CLA ? GO:0009523 ... P19052 38297122
    831139 8irh:H (2.25) BS03 CLA ? GO:0009523 ... P19052 38297122
    831140 8irh:I (2.25) BS01 CLA ? GO:0005737 ... P12240 38297122
    831141 8irh:J (2.25) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    831142 8irh:K (2.25) BS01 peptide ? GO:0005737 ... P19054 38297122
    831143 8irh:K (2.25) BS02 CLA ? GO:0005737 ... P19054 38297122
    831144 8irh:K (2.25) BS03 CLA ? GO:0005737 ... P19054 38297122
    831145 8irh:O (2.25) BS01 CA ? GO:0009523 ... D0VWR2 38297122
    831146 8irh:V (2.25) BS01 HEC ? GO:0005506 ... P0A387 38297122
    831147 8irh:Z (2.25) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    831148 8irh:a (2.25) BS01 OEY 1.10.3.9 GO:0005506 ... P51765 38297122
    831149 8irh:a (2.25) BS02 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    831150 8irh:a (2.25) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    831151 8irh:a (2.25) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    831152 8irh:a (2.25) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    831153 8irh:a (2.25) BS06 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    831154 8irh:a (2.25) BS07 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    831155 8irh:a (2.25) BS08 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    831156 8irh:a (2.25) BS09 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    831157 8irh:a (2.25) BS10 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    831158 8irh:b (2.25) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    831159 8irh:b (2.25) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    831160 8irh:b (2.25) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    831161 8irh:b (2.25) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    831162 8irh:b (2.25) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    831163 8irh:b (2.25) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    831164 8irh:b (2.25) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    831165 8irh:b (2.25) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    831166 8irh:b (2.25) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    831167 8irh:b (2.25) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    831168 8irh:b (2.25) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    831169 8irh:b (2.25) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    831170 8irh:b (2.25) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    831171 8irh:b (2.25) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    831172 8irh:b (2.25) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    831173 8irh:c (2.25) BS01 OEY ? GO:0005737 ... D0VWR7 38297122
    831174 8irh:c (2.25) BS02 OEX ? GO:0005737 ... D0VWR7 38297122
    831175 8irh:c (2.25) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    831176 8irh:c (2.25) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    831177 8irh:c (2.25) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    831178 8irh:c (2.25) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    831179 8irh:c (2.25) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    831180 8irh:c (2.25) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    831181 8irh:c (2.25) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    831182 8irh:c (2.25) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    831183 8irh:c (2.25) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    831184 8irh:c (2.25) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    831185 8irh:c (2.25) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    831186 8irh:c (2.25) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    831187 8irh:c (2.25) BS15 CLA ? GO:0005737 ... D0VWR7 38297122
    831188 8irh:c (2.25) BS16 CA ? GO:0005737 ... D0VWR7 38297122
    831189 8irh:c (2.25) BS17 CA ? GO:0005737 ... D0VWR7 38297122
    831190 8irh:d (2.25) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831191 8irh:d (2.25) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831192 8irh:d (2.25) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831193 8irh:d (2.25) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831194 8irh:d (2.25) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831195 8irh:d (2.25) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831196 8irh:d (2.25) BS07 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831197 8irh:d (2.25) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831198 8irh:d (2.25) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    831199 8irh:e (2.25) BS01 HEM ? GO:0005506 ... P12238 38297122
    831200 8irh:f (2.25) BS01 HEM ? GO:0005506 ... P12239 38297122

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).