SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    833001 8iyj:TB (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833002 8iyj:TC (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833003 8iyj:TD (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833004 8iyj:TE (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833005 8iyj:TF (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833006 8iyj:TG (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833007 8iyj:TH (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833008 8iyj:TI (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833009 8iyj:TJ (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833010 8iyj:TK (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833011 8iyj:TL (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833012 8iyj:TM (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833013 8iyj:TN (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833014 8iyj:UA (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833015 8iyj:UB (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833016 8iyj:UC (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833017 8iyj:UD (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833018 8iyj:UE (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833019 8iyj:UF (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833020 8iyj:UG (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833021 8iyj:UH (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833022 8iyj:UI (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833023 8iyj:UJ (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833024 8iyj:UK (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833025 8iyj:UL (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833026 8iyj:UM (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833027 8iyj:UN (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833028 8iyj:UO (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833029 8iyj:VA (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833030 8iyj:VB (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833031 8iyj:VC (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833032 8iyj:VD (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833033 8iyj:VE (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833034 8iyj:VF (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833035 8iyj:VG (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833036 8iyj:VH (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833037 8iyj:VI (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833038 8iyj:VJ (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833039 8iyj:VK (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833040 8iyj:VL (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833041 8iyj:VM (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833042 8iyj:VN (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833043 8iyj:VO (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833044 8iyj:WA (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833045 8iyj:WB (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833046 8iyj:WC (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833047 8iyj:WD (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833048 8iyj:WE (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833049 8iyj:WF (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833050 8iyj:WG (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833051 8iyj:WH (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833052 8iyj:WI (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833053 8iyj:WJ (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833054 8iyj:WK (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833055 8iyj:WK (3.5) BS02 MG 3.6.5.- GO:0003674 ... P05214 37295417
    833056 8iyj:WL (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833057 8iyj:WM (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833058 8iyj:WN (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833059 8iyj:WO (3.5) BS01 GTP 3.6.5.- GO:0003674 ... P05214 37295417
    833060 8iyj:WP (3.5) BS01 GDP ? GO:0003725 ... P68372 37295417
    833061 8iyk:L (2.95) BS01 SF4 ? GO:0030430 ... P03738 37918400
    833062 8iyk:N (2.95) BS01 SF4 ? GO:0030430 ... P03738 37918400
    833063 8iyk:f (2.95) BS01 SF4 ? GO:0030430 ... P03738 37918400
    833064 8iyl:G (3.0) BS01 SF4 ? GO:0030430 ... P03738 37918400
    833065 8iyl:L (3.0) BS01 SF4 ? GO:0030430 ... P03738 37918400
    833066 8iyl:d (3.0) BS01 SF4 ? GO:0030430 ... P03738 37918400
    833067 8iyn:A (2.081) BS01 FMN 2.7.11.1 N/A A0A1Y1HNG4 39344087
    833068 8iyo:A (2.4) BS01 ACO ? GO:0008080 ... O25589 N/A
    833069 8iyo:B (2.4) BS01 ACO ? GO:0008080 ... O25589 N/A
    833070 8iyo:C (2.4) BS01 ACO ? GO:0008080 ... O25589 N/A
    833071 8iyo:D (2.4) BS01 ACO ? GO:0008080 ... O25589 N/A
    833072 8iyp:A (1.651) BS01 PLS 2.3.1.50 GO:0004758 ... A7BFV6 38325740
    833073 8iyq:A (2.46) BS01 dna N/A GO:0003676 ... N/A 38811729
    833074 8iyq:A (2.46) BS02 rna N/A GO:0003676 ... N/A 38811729
    833075 8iyq:A (2.46) BS03 dna N/A GO:0003676 ... N/A 38811729
    833076 8iys:A (2.95) BS01 GDP ? GO:0001664 ... P50148 37286793
    833077 8iys:R (2.95) BS01 YN9 ? GO:0001818 ... Q5NUL3 37286793
    833078 8iyt:A (1.7) BS01 S5R 2.3.1.50 GO:0004758 ... A7BFV6 38325740
    833079 8iyu:A (2.1) BS01 NI 4.99.1.11
    4.99.1.3
    GO:0009236 ... Q58380 39548701
    833080 8iyu:B (2.1) BS01 NI 4.99.1.11
    4.99.1.3
    GO:0009236 ... Q58380 39548701
    833081 8iyv:A (2.1) BS01 CA N/A GO:0004175 ... P00760 39216203
    833082 8iyv:A (2.1) BS02 FO9 N/A GO:0004175 ... P00760 39216203
    833083 8iyw:R (3.45) BS01 OKL ? GO:0001781 ... P08173
    Q8TDS4
    38431681
    833084 8iyx:C (3.34) BS01 S6R ? GO:0004930 ... Q9UPC5 37733739
    833085 8iz4:R (2.93) BS01 TJR ? GO:0004930 ... Q9UPC5 N/A
    833086 8iz4:R (2.93) BS02 SER ? GO:0004930 ... Q9UPC5 N/A
    833087 8iz4:R (2.93) BS03 CLR ? GO:0004930 ... Q9UPC5 N/A
    833088 8iz7:A (3.8) BS01 SUZ 7.6.2.-
    7.6.2.2
    7.6.2.3
    GO:0001409 ... O15439 37217525
    833089 8iz9:A (2.95) BS01 XPG 7.6.2.-
    7.6.2.2
    7.6.2.3
    GO:0001409 ... O15439 37217525
    833090 8iza:A (3.48) BS01 ATP 7.6.2.-
    7.6.2.2
    7.6.2.3
    GO:0001409 ... O15439 37217525
    833091 8iza:A (3.48) BS02 ATP 7.6.2.-
    7.6.2.2
    7.6.2.3
    GO:0001409 ... O15439 37217525
    833092 8izb:R (3.06) BS01 UBL ? GO:0004930 ... Q9BXC1 38048360
    833093 8izb:R (3.06) BS02 SER ? GO:0004930 ... Q9BXC1 38048360
    833094 8izb:R (3.06) BS03 CLR ? GO:0004930 ... Q9BXC1 38048360
    833095 8izb:R (3.06) BS04 CLR ? GO:0004930 ... Q9BXC1 38048360
    833096 8izc:A (1.45) BS01 S93 2.7.11.1
    2.7.11.26
    GO:0004672 ... P48730 N/A
    833097 8izc:B (1.45) BS01 S93 2.7.11.1
    2.7.11.26
    GO:0004672 ... P48730 N/A
    833098 8izd:A (3.09) BS01 9NY 2.3.1.297 GO:0005515 ... P28496 37953642
    833099 8izd:C (3.09) BS01 9NY 2.3.1.297 GO:0005515 ... P28496 37953642
    833100 8ize:A (1.4) BS01 S9R ? N/A O00481 37674084
    833101 8izg:A (1.6) BS01 SE6 ? N/A O00481 37674084
    833102 8izh:A (2.3) BS01 CA N/A GO:0004175 ... P00760 39216203
    833103 8izh:A (2.3) BS02 AGU N/A GO:0004175 ... P00760 39216203
    833104 8izh:A (2.3) BS03 AGU N/A GO:0004175 ... P00760 39216203
    833105 8izh:A (2.3) BS04 AGU N/A GO:0004175 ... P00760 39216203
    833106 8izi:A (2.1) BS01 CA N/A GO:0004175 ... P00760 39216203
    833107 8izi:A (2.1) BS02 SD9 N/A GO:0004175 ... P00760 39216203
    833108 8izj:A (1.6) BS01 AMP 2.4.2.7 GO:0000287 ... P69503 N/A
    833109 8izj:B (1.6) BS01 AMP 2.4.2.7 GO:0000287 ... P69503 N/A
    833110 8izk:A (2.0) BS01 CA N/A GO:0004175 ... P00760 39216203
    833111 8izk:A (2.0) BS02 GAI N/A GO:0004175 ... P00760 39216203
    833112 8izl:A (2.93) BS01 ZN 2.1.1.-
    2.1.1.375
    2.7.7.48
    2.7.7.88
    3.6.1.-
    GO:0001172 ... Q9J4L0 38760379
    833113 8izl:A (2.93) BS02 ZN 2.1.1.-
    2.1.1.375
    2.7.7.48
    2.7.7.88
    3.6.1.-
    GO:0001172 ... Q9J4L0 38760379
    833114 8izm:A (3.01) BS01 ZN 2.1.1.-
    2.1.1.375
    2.7.7.48
    2.7.7.88
    3.6.1.-
    GO:0001172 ... Q9J4L0 N/A
    833115 8izm:A (3.01) BS02 ZN 2.1.1.-
    2.1.1.375
    2.7.7.48
    2.7.7.88
    3.6.1.-
    GO:0001172 ... Q9J4L0 N/A
    833116 8izt:A (1.74) BS01 ZN ? N/A A0A7H0DNA4 38159644
    833117 8izy:A (2.5) BS01 9MF ? GO:0005216 ... O43526 37857637
    833118 8izy:A (2.5) BS02 9MF ? GO:0005216 ... O43526 37857637
    833119 8izy:A (2.5) BS03 9MF ? GO:0005216 ... O43526 37857637
    833120 8izy:B (2.5) BS01 9MF ? GO:0005216 ... O43526 37857637
    833121 8izy:B (2.5) BS02 9MF ? GO:0005216 ... O43526 37857637
    833122 8izy:B (2.5) BS03 9MF ? GO:0005216 ... O43526 37857637
    833123 8izy:C (2.5) BS01 9MF ? GO:0005216 ... O43526 37857637
    833124 8izy:C (2.5) BS02 9MF ? GO:0005216 ... O43526 37857637
    833125 8izy:C (2.5) BS03 9MF ? GO:0005216 ... O43526 37857637
    833126 8izy:D (2.5) BS01 9MF ? GO:0005216 ... O43526 37857637
    833127 8izy:D (2.5) BS02 9MF ? GO:0005216 ... O43526 37857637
    833128 8izy:D (2.5) BS03 9MF ? GO:0005216 ... O43526 37857637
    833129 8j00:A (3.0) BS01 P0T ? GO:0005216 ... O43526 37857637
    833130 8j00:A (3.0) BS02 P0T ? GO:0005216 ... O43526 37857637
    833131 8j00:A (3.0) BS03 P0T ? GO:0005216 ... O43526 37857637
    833132 8j00:B (3.0) BS01 P0T ? GO:0005216 ... O43526 37857637
    833133 8j00:B (3.0) BS02 P0T ? GO:0005216 ... O43526 37857637
    833134 8j00:B (3.0) BS03 P0T ? GO:0005216 ... O43526 37857637
    833135 8j00:C (3.0) BS01 P0T ? GO:0005216 ... O43526 37857637
    833136 8j00:C (3.0) BS02 P0T ? GO:0005216 ... O43526 37857637
    833137 8j00:C (3.0) BS03 P0T ? GO:0005216 ... O43526 37857637
    833138 8j00:D (3.0) BS01 P0T ? GO:0005216 ... O43526 37857637
    833139 8j00:D (3.0) BS02 P0T ? GO:0005216 ... O43526 37857637
    833140 8j00:D (3.0) BS03 P0T ? GO:0005216 ... O43526 37857637
    833141 8j01:A (3.1) BS01 P0T ? GO:0005216 ... O43526 37857637
    833142 8j01:A (3.1) BS02 PIO ? GO:0005216 ... O43526 37857637
    833143 8j01:A (3.1) BS03 P0T ? GO:0005216 ... O43526 37857637
    833144 8j01:A (3.1) BS04 PIO ? GO:0005216 ... O43526 37857637
    833145 8j01:B (3.1) BS01 PIO ? GO:0005216 ... O43526 37857637
    833146 8j01:B (3.1) BS02 PIO ? GO:0005216 ... O43526 37857637
    833147 8j01:B (3.1) BS03 P0T ? GO:0005216 ... O43526 37857637
    833148 8j01:D (3.1) BS01 PIO ? GO:0005216 ... O43526 37857637
    833149 8j01:D (3.1) BS02 PIO ? GO:0005216 ... O43526 37857637
    833150 8j01:D (3.1) BS03 P0T ? GO:0005216 ... O43526 37857637
    833151 8j01:G (3.1) BS01 P0T ? GO:0005216 ... O43526 37857637
    833152 8j01:G (3.1) BS02 PIO ? GO:0005216 ... O43526 37857637
    833153 8j01:G (3.1) BS03 P0T ? GO:0005216 ... O43526 37857637
    833154 8j01:G (3.1) BS04 PIO ? GO:0005216 ... O43526 37857637
    833155 8j02:A (3.5) BS01 PIO ? GO:0005216 ... O43526 37857637
    833156 8j02:A (3.5) BS02 P0T ? GO:0005216 ... O43526 37857637
    833157 8j02:A (3.5) BS03 PIO ? GO:0005216 ... O43526 37857637
    833158 8j02:B (3.5) BS01 PIO ? GO:0005216 ... O43526 37857637
    833159 8j02:B (3.5) BS02 PIO ? GO:0005216 ... O43526 37857637
    833160 8j02:B (3.5) BS03 P0T ? GO:0005216 ... O43526 37857637
    833161 8j02:D (3.5) BS01 PIO ? GO:0005216 ... O43526 37857637
    833162 8j02:D (3.5) BS02 PIO ? GO:0005216 ... O43526 37857637
    833163 8j02:D (3.5) BS03 P0T ? GO:0005216 ... O43526 37857637
    833164 8j02:G (3.5) BS01 P0T ? GO:0005216 ... O43526 37857637
    833165 8j02:G (3.5) BS02 PIO ? GO:0005216 ... O43526 37857637
    833166 8j02:G (3.5) BS03 PIO ? GO:0005216 ... O43526 37857637
    833167 8j03:A (2.7) BS01 P0T ? GO:0005216 ... O43526 37857637
    833168 8j03:A (2.7) BS02 P0T ? GO:0005216 ... O43526 37857637
    833169 8j03:D (2.7) BS01 P0T ? GO:0005216 ... O43526 37857637
    833170 8j03:D (2.7) BS02 P0T ? GO:0005216 ... O43526 37857637
    833171 8j03:G (2.7) BS01 P0T ? GO:0005216 ... O43526 37857637
    833172 8j03:G (2.7) BS02 P0T ? GO:0005216 ... O43526 37857637
    833173 8j03:I (2.7) BS01 P0T ? GO:0005216 ... O43526 37857637
    833174 8j03:I (2.7) BS02 P0T ? GO:0005216 ... O43526 37857637
    833175 8j04:A (2.7) BS01 9MF ? GO:0005216 ... O43526 37857637
    833176 8j04:A (2.7) BS02 9MF ? GO:0005216 ... O43526 37857637
    833177 8j04:A (2.7) BS03 9MF ? GO:0005216 ... O43526 37857637
    833178 8j04:B (2.7) BS01 9MF ? GO:0005216 ... O43526 37857637
    833179 8j04:B (2.7) BS02 9MF ? GO:0005216 ... O43526 37857637
    833180 8j04:B (2.7) BS03 9MF ? GO:0005216 ... O43526 37857637
    833181 8j04:D (2.7) BS01 9MF ? GO:0005216 ... O43526 37857637
    833182 8j04:D (2.7) BS02 9MF ? GO:0005216 ... O43526 37857637
    833183 8j04:D (2.7) BS03 9MF ? GO:0005216 ... O43526 37857637
    833184 8j04:G (2.7) BS01 9MF ? GO:0005216 ... O43526 37857637
    833185 8j04:G (2.7) BS02 9MF ? GO:0005216 ... O43526 37857637
    833186 8j04:G (2.7) BS03 9MF ? GO:0005216 ... O43526 37857637
    833187 8j07:8P (4.1) BS01 peptide ? GO:0005634 ... Q9UIF3 37258679
    833188 8j07:AB (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833189 8j07:AC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833190 8j07:AD (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833191 8j07:AE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833192 8j07:AF (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833193 8j07:AG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833194 8j07:AH (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833195 8j07:AI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833196 8j07:AJ (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833197 8j07:AK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833198 8j07:AK (4.1) BS02 MG 3.6.5.- GO:0000226 ... Q71U36 37258679
    833199 8j07:AL (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833200 8j07:AM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).