SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    833801 8ir5:c (2.15) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    833802 8ir5:c (2.15) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    833803 8ir5:c (2.15) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    833804 8ir5:c (2.15) BS16 CA ? GO:0005737 ... D0VWR7 38297122
    833805 8ir5:d (2.15) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833806 8ir5:d (2.15) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833807 8ir5:d (2.15) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833808 8ir5:d (2.15) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833809 8ir5:d (2.15) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833810 8ir5:d (2.15) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833811 8ir5:d (2.15) BS07 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833812 8ir5:d (2.15) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833813 8ir5:d (2.15) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833814 8ir5:e (2.15) BS01 HEM ? GO:0005506 ... P12238 38297122
    833815 8ir5:f (2.15) BS01 HEM ? GO:0005506 ... P12239 38297122
    833816 8ir5:h (2.15) BS01 CLA ? GO:0009523 ... P19052 38297122
    833817 8ir5:h (2.15) BS02 CLA ? GO:0009523 ... P19052 38297122
    833818 8ir5:h (2.15) BS03 CLA ? GO:0009523 ... P19052 38297122
    833819 8ir5:i (2.15) BS01 CLA ? GO:0005737 ... P12240 38297122
    833820 8ir5:j (2.15) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    833821 8ir5:k (2.15) BS01 peptide ? GO:0005737 ... P19054 38297122
    833822 8ir5:k (2.15) BS02 CLA ? GO:0005737 ... P19054 38297122
    833823 8ir5:k (2.15) BS03 CLA ? GO:0005737 ... P19054 38297122
    833824 8ir5:o (2.15) BS01 CA ? GO:0009654 ... D0VWR2 38297122
    833825 8ir5:v (2.15) BS01 HEC ? GO:0005506 ... P0A387 38297122
    833826 8ir5:z (2.15) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    833827 8ir6:A (2.2) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    833828 8ir6:A (2.2) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    833829 8ir6:A (2.2) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    833830 8ir6:A (2.2) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    833831 8ir6:A (2.2) BS05 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    833832 8ir6:A (2.2) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    833833 8ir6:A (2.2) BS07 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    833834 8ir6:A (2.2) BS08 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    833835 8ir6:A (2.2) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    833836 8ir6:B (2.2) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    833837 8ir6:B (2.2) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    833838 8ir6:B (2.2) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    833839 8ir6:B (2.2) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    833840 8ir6:B (2.2) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    833841 8ir6:B (2.2) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    833842 8ir6:B (2.2) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    833843 8ir6:B (2.2) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    833844 8ir6:B (2.2) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    833845 8ir6:B (2.2) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    833846 8ir6:B (2.2) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    833847 8ir6:B (2.2) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    833848 8ir6:B (2.2) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    833849 8ir6:B (2.2) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    833850 8ir6:B (2.2) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    833851 8ir6:B (2.2) BS16 CLA ? GO:0009521 ... D0VWR1 38297122
    833852 8ir6:C (2.2) BS01 OEX ? GO:0005737 ... D0VWR7 38297122
    833853 8ir6:C (2.2) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    833854 8ir6:C (2.2) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    833855 8ir6:C (2.2) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    833856 8ir6:C (2.2) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    833857 8ir6:C (2.2) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    833858 8ir6:C (2.2) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    833859 8ir6:C (2.2) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    833860 8ir6:C (2.2) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    833861 8ir6:C (2.2) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    833862 8ir6:C (2.2) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    833863 8ir6:C (2.2) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    833864 8ir6:C (2.2) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    833865 8ir6:C (2.2) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    833866 8ir6:C (2.2) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    833867 8ir6:D (2.2) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833868 8ir6:D (2.2) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833869 8ir6:D (2.2) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833870 8ir6:D (2.2) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833871 8ir6:D (2.2) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833872 8ir6:D (2.2) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833873 8ir6:D (2.2) BS07 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833874 8ir6:D (2.2) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833875 8ir6:D (2.2) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833876 8ir6:E (2.2) BS01 HEM ? GO:0005506 ... P12238 38297122
    833877 8ir6:F (2.2) BS01 HEM ? GO:0005506 ... P12239 38297122
    833878 8ir6:H (2.2) BS01 CLA ? GO:0009523 ... P19052 38297122
    833879 8ir6:H (2.2) BS02 CLA ? GO:0009523 ... P19052 38297122
    833880 8ir6:H (2.2) BS03 CLA ? GO:0009523 ... P19052 38297122
    833881 8ir6:I (2.2) BS01 CLA ? GO:0005737 ... P12240 38297122
    833882 8ir6:J (2.2) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    833883 8ir6:K (2.2) BS01 peptide ? GO:0005737 ... P19054 38297122
    833884 8ir6:K (2.2) BS02 CLA ? GO:0005737 ... P19054 38297122
    833885 8ir6:K (2.2) BS03 CLA ? GO:0005737 ... P19054 38297122
    833886 8ir6:O (2.2) BS01 CA ? GO:0009654 ... D0VWR2 38297122
    833887 8ir6:V (2.2) BS01 HEC ? GO:0005506 ... P0A387 38297122
    833888 8ir6:Z (2.2) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    833889 8ir6:a (2.2) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    833890 8ir6:a (2.2) BS02 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    833891 8ir6:a (2.2) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    833892 8ir6:a (2.2) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    833893 8ir6:a (2.2) BS05 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    833894 8ir6:a (2.2) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    833895 8ir6:a (2.2) BS07 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    833896 8ir6:a (2.2) BS08 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    833897 8ir6:a (2.2) BS09 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    833898 8ir6:b (2.2) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    833899 8ir6:b (2.2) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    833900 8ir6:b (2.2) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    833901 8ir6:b (2.2) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    833902 8ir6:b (2.2) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    833903 8ir6:b (2.2) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    833904 8ir6:b (2.2) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    833905 8ir6:b (2.2) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    833906 8ir6:b (2.2) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    833907 8ir6:b (2.2) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    833908 8ir6:b (2.2) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    833909 8ir6:b (2.2) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    833910 8ir6:b (2.2) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    833911 8ir6:b (2.2) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    833912 8ir6:b (2.2) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    833913 8ir6:c (2.2) BS01 OEX ? GO:0005737 ... D0VWR7 38297122
    833914 8ir6:c (2.2) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    833915 8ir6:c (2.2) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    833916 8ir6:c (2.2) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    833917 8ir6:c (2.2) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    833918 8ir6:c (2.2) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    833919 8ir6:c (2.2) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    833920 8ir6:c (2.2) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    833921 8ir6:c (2.2) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    833922 8ir6:c (2.2) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    833923 8ir6:c (2.2) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    833924 8ir6:c (2.2) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    833925 8ir6:c (2.2) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    833926 8ir6:c (2.2) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    833927 8ir6:c (2.2) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    833928 8ir6:c (2.2) BS16 CA ? GO:0005737 ... D0VWR7 38297122
    833929 8ir6:d (2.2) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833930 8ir6:d (2.2) BS02 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833931 8ir6:d (2.2) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833932 8ir6:d (2.2) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833933 8ir6:d (2.2) BS05 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833934 8ir6:d (2.2) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833935 8ir6:d (2.2) BS07 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833936 8ir6:d (2.2) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833937 8ir6:d (2.2) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833938 8ir6:e (2.2) BS01 HEM ? GO:0005506 ... P12238 38297122
    833939 8ir6:f (2.2) BS01 HEM ? GO:0005506 ... P12239 38297122
    833940 8ir6:h (2.2) BS01 CLA ? GO:0009523 ... P19052 38297122
    833941 8ir6:h (2.2) BS02 CLA ? GO:0009523 ... P19052 38297122
    833942 8ir6:h (2.2) BS03 CLA ? GO:0009523 ... P19052 38297122
    833943 8ir6:h (2.2) BS04 CLA ? GO:0009523 ... P19052 38297122
    833944 8ir6:i (2.2) BS01 CLA ? GO:0005737 ... P12240 38297122
    833945 8ir6:j (2.2) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    833946 8ir6:k (2.2) BS01 peptide ? GO:0005737 ... P19054 38297122
    833947 8ir6:k (2.2) BS02 CLA ? GO:0005737 ... P19054 38297122
    833948 8ir6:k (2.2) BS03 CLA ? GO:0005737 ... P19054 38297122
    833949 8ir6:o (2.2) BS01 CA ? GO:0009654 ... D0VWR2 38297122
    833950 8ir6:v (2.2) BS01 HEC ? GO:0005506 ... P0A387 38297122
    833951 8ir6:x (2.2) BS01 CLA ? GO:0009523 ... D0VWR4 38297122
    833952 8ir6:z (2.2) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    833953 8ir7:A (2.25) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    833954 8ir7:A (2.25) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    833955 8ir7:A (2.25) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    833956 8ir7:A (2.25) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    833957 8ir7:A (2.25) BS05 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    833958 8ir7:A (2.25) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    833959 8ir7:A (2.25) BS07 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    833960 8ir7:A (2.25) BS08 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    833961 8ir7:A (2.25) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    833962 8ir7:B (2.25) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    833963 8ir7:B (2.25) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    833964 8ir7:B (2.25) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    833965 8ir7:B (2.25) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    833966 8ir7:B (2.25) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    833967 8ir7:B (2.25) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    833968 8ir7:B (2.25) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    833969 8ir7:B (2.25) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    833970 8ir7:B (2.25) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    833971 8ir7:B (2.25) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    833972 8ir7:B (2.25) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    833973 8ir7:B (2.25) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    833974 8ir7:B (2.25) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    833975 8ir7:B (2.25) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    833976 8ir7:B (2.25) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    833977 8ir7:B (2.25) BS16 CLA ? GO:0009521 ... D0VWR1 38297122
    833978 8ir7:C (2.25) BS01 OEX ? GO:0005737 ... D0VWR7 38297122
    833979 8ir7:C (2.25) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    833980 8ir7:C (2.25) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    833981 8ir7:C (2.25) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    833982 8ir7:C (2.25) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    833983 8ir7:C (2.25) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    833984 8ir7:C (2.25) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    833985 8ir7:C (2.25) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    833986 8ir7:C (2.25) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    833987 8ir7:C (2.25) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    833988 8ir7:C (2.25) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    833989 8ir7:C (2.25) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    833990 8ir7:C (2.25) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    833991 8ir7:C (2.25) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    833992 8ir7:C (2.25) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    833993 8ir7:D (2.25) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833994 8ir7:D (2.25) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833995 8ir7:D (2.25) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833996 8ir7:D (2.25) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833997 8ir7:D (2.25) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833998 8ir7:D (2.25) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    833999 8ir7:D (2.25) BS07 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834000 8ir7:D (2.25) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).