SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    833801 8j07:UL (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833802 8j07:UM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833803 8j07:UN (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833804 8j07:UO (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833805 8j07:UP (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833806 8j07:UQ (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833807 8j07:UR (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833808 8j07:US (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833809 8j07:UT (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833810 8j07:UU (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833811 8j07:UV (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833812 8j07:UW (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833813 8j07:UX (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833814 8j07:UY (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833815 8j07:UZ (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833816 8j07:VB (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833817 8j07:VC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833818 8j07:VD (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833819 8j07:VE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833820 8j07:VF (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833821 8j07:VG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833822 8j07:VH (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833823 8j07:VI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833824 8j07:VJ (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833825 8j07:VK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833826 8j07:VK (4.1) BS02 MG 3.6.5.- GO:0000226 ... Q71U36 37258679
    833827 8j07:VL (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833828 8j07:VM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833829 8j07:VN (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833830 8j07:VN (4.1) BS02 GTP ? GO:0000226 ... P68371 37258679
    833831 8j07:VO (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833832 8j07:VO (4.1) BS02 MG 3.6.5.- GO:0000226 ... Q71U36 37258679
    833833 8j07:VP (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833834 8j07:VQ (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833835 8j07:VR (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833836 8j07:VR (4.1) BS02 GTP ? GO:0000226 ... P68371 37258679
    833837 8j07:VS (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833838 8j07:VT (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833839 8j07:VU (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833840 8j07:VV (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833841 8j07:VW (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833842 8j07:VX (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833843 8j07:VY (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833844 8j07:VZ (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833845 8j07:WA (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833846 8j07:WB (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833847 8j07:WC (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833848 8j07:WD (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833849 8j07:WE (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833850 8j07:WF (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833851 8j07:WG (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833852 8j07:WH (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833853 8j07:WI (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833854 8j07:WJ (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833855 8j07:WK (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833856 8j07:WL (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833857 8j07:WM (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833858 8j07:WN (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833859 8j07:WO (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833860 8j07:WO (4.1) BS02 MG 3.6.5.- GO:0000226 ... Q71U36 37258679
    833861 8j07:WP (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833862 8j07:WQ (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833863 8j07:WR (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833864 8j07:WS (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833865 8j07:WT (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833866 8j07:WU (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833867 8j07:WV (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833868 8j07:WW (4.1) BS01 GTP 3.6.5.- GO:0000226 ... Q71U36 37258679
    833869 8j07:WX (4.1) BS01 GDP ? GO:0000226 ... P68371 37258679
    833870 8j0d:3 (3.19) BS01 CLA ? GO:0009416 ... B8BUU4 37878698
    833871 8j0d:3 (3.19) BS02 CLA ? GO:0009416 ... B8BUU4 37878698
    833872 8j0d:3 (3.19) BS03 CLA ? GO:0009416 ... B8BUU4 37878698
    833873 8j0d:3 (3.19) BS04 CLA ? GO:0009416 ... B8BUU4 37878698
    833874 8j0d:3 (3.19) BS05 CLA ? GO:0009416 ... B8BUU4 37878698
    833875 8j0d:3 (3.19) BS06 CLA ? GO:0009416 ... B8BUU4 37878698
    833876 8j0d:3 (3.19) BS07 CLA ? GO:0009416 ... B8BUU4 37878698
    833877 8j0d:3 (3.19) BS08 KC1 ? GO:0009416 ... B8BUU4 37878698
    833878 8j0d:3 (3.19) BS09 CLA ? GO:0009416 ... B8BUU4 37878698
    833879 8j0d:3 (3.19) BS10 CLA ? GO:0009416 ... B8BUU4 37878698
    833880 8j0d:3 (3.19) BS11 A86 ? GO:0009416 ... B8BUU4 37878698
    833881 8j0d:3 (3.19) BS12 DD6 ? GO:0009416 ... B8BUU4 37878698
    833882 8j0d:3 (3.19) BS13 A86 ? GO:0009416 ... B8BUU4 37878698
    833883 8j0d:3 (3.19) BS14 CLA ? GO:0009416 ... B8BUU4 37878698
    833884 8j0d:4 (3.19) BS01 CLA ? GO:0009416 ... B8BVI1 37878698
    833885 8j0d:4 (3.19) BS02 A86 ? GO:0009416 ... B8BVI1 37878698
    833886 8j0d:4 (3.19) BS03 DD6 ? GO:0009416 ... B8BVI1 37878698
    833887 8j0d:4 (3.19) BS04 A86 ? GO:0009416 ... B8BVI1 37878698
    833888 8j0d:4 (3.19) BS05 CLA ? GO:0009416 ... B8BVI1 37878698
    833889 8j0d:4 (3.19) BS06 CLA ? GO:0009416 ... B8BVI1 37878698
    833890 8j0d:4 (3.19) BS07 KC2 ? GO:0009416 ... B8BVI1 37878698
    833891 8j0d:4 (3.19) BS08 CLA ? GO:0009416 ... B8BVI1 37878698
    833892 8j0d:4 (3.19) BS09 CLA ? GO:0009416 ... B8BVI1 37878698
    833893 8j0d:4 (3.19) BS10 CLA ? GO:0009416 ... B8BVI1 37878698
    833894 8j0d:4 (3.19) BS11 CLA ? GO:0009416 ... B8BVI1 37878698
    833895 8j0d:4 (3.19) BS12 CLA ? GO:0009416 ... B8BVI1 37878698
    833896 8j0d:4 (3.19) BS13 CLA ? GO:0009416 ... B8BVI1 37878698
    833897 8j0d:4 (3.19) BS14 CLA ? GO:0009416 ... B8BVI1 37878698
    833898 8j0d:4 (3.19) BS15 CLA ? GO:0009416 ... B8BVI1 37878698
    833899 8j0d:4 (3.19) BS16 CLA ? GO:0009416 ... B8BVI1 37878698
    833900 8j0d:5 (3.19) BS01 CLA ? GO:0009765 ... B8BX92 37878698
    833901 8j0d:5 (3.19) BS02 A86 ? GO:0009765 ... B8BX92 37878698
    833902 8j0d:5 (3.19) BS03 A86 ? GO:0009765 ... B8BX92 37878698
    833903 8j0d:5 (3.19) BS04 A86 ? GO:0009765 ... B8BX92 37878698
    833904 8j0d:5 (3.19) BS05 A86 ? GO:0009765 ... B8BX92 37878698
    833905 8j0d:5 (3.19) BS06 CLA ? GO:0009765 ... B8BX92 37878698
    833906 8j0d:5 (3.19) BS07 CLA ? GO:0009765 ... B8BX92 37878698
    833907 8j0d:5 (3.19) BS08 KC2 ? GO:0009765 ... B8BX92 37878698
    833908 8j0d:5 (3.19) BS09 CLA ? GO:0009765 ... B8BX92 37878698
    833909 8j0d:5 (3.19) BS10 CLA ? GO:0009765 ... B8BX92 37878698
    833910 8j0d:5 (3.19) BS11 CLA ? GO:0009765 ... B8BX92 37878698
    833911 8j0d:5 (3.19) BS12 CLA ? GO:0009765 ... B8BX92 37878698
    833912 8j0d:5 (3.19) BS13 KC1 ? GO:0009765 ... B8BX92 37878698
    833913 8j0d:5 (3.19) BS14 CLA ? GO:0009765 ... B8BX92 37878698
    833914 8j0d:6 (3.19) BS01 CLA ? GO:0009416 ... B8CEV5 37878698
    833915 8j0d:6 (3.19) BS02 A86 ? GO:0009416 ... B8CEV5 37878698
    833916 8j0d:6 (3.19) BS03 A86 ? GO:0009416 ... B8CEV5 37878698
    833917 8j0d:6 (3.19) BS04 A86 ? GO:0009416 ... B8CEV5 37878698
    833918 8j0d:6 (3.19) BS05 CLA ? GO:0009416 ... B8CEV5 37878698
    833919 8j0d:6 (3.19) BS06 CLA ? GO:0009416 ... B8CEV5 37878698
    833920 8j0d:6 (3.19) BS07 KC2 ? GO:0009416 ... B8CEV5 37878698
    833921 8j0d:6 (3.19) BS08 CLA ? GO:0009416 ... B8CEV5 37878698
    833922 8j0d:6 (3.19) BS09 CLA ? GO:0009416 ... B8CEV5 37878698
    833923 8j0d:6 (3.19) BS10 CLA ? GO:0009416 ... B8CEV5 37878698
    833924 8j0d:6 (3.19) BS11 CLA ? GO:0009416 ... B8CEV5 37878698
    833925 8j0d:6 (3.19) BS12 KC1 ? GO:0009416 ... B8CEV5 37878698
    833926 8j0d:6 (3.19) BS13 CLA ? GO:0009416 ... B8CEV5 37878698
    833927 8j0d:6 (3.19) BS14 CLA ? GO:0009416 ... B8CEV5 37878698
    833928 8j0e:B (3.4) BS01 peptide 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 N/A
    833929 8j0e:B (3.4) BS02 peptide 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 N/A
    833930 8j0e:B (3.4) BS03 TKC 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 N/A
    833931 8j0e:B (3.4) BS04 MG 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 N/A
    833932 8j0f:A (3.3) BS01 peptide 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    833933 8j0f:A (3.3) BS02 peptide 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    833934 8j0f:A (3.3) BS03 ADP 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    833935 8j0f:A (3.3) BS04 RGP 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    833936 8j0f:A (3.3) BS05 MG 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    833937 8j0f:B (3.3) BS01 peptide 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    833938 8j0f:B (3.3) BS02 peptide 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    833939 8j0f:B (3.3) BS03 ADP 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    833940 8j0f:B (3.3) BS04 RGP 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    833941 8j0f:B (3.3) BS05 MG 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    833942 8j0f:C (3.3) BS01 peptide 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    833943 8j0f:C (3.3) BS02 peptide 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    833944 8j0f:C (3.3) BS03 ADP 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    833945 8j0f:C (3.3) BS04 RGP 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    833946 8j0f:C (3.3) BS05 MG 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    833947 8j0f:D (3.3) BS01 peptide 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    833948 8j0f:D (3.3) BS02 peptide 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    833949 8j0f:D (3.3) BS03 ADP 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    833950 8j0f:D (3.3) BS04 RGP 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    833951 8j0f:D (3.3) BS05 MG 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    833952 8j0g:B (3.7) BS01 peptide 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 N/A
    833953 8j0g:B (3.7) BS02 MG 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 N/A
    833954 8j0g:B (3.7) BS03 GGL 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 N/A
    833955 8j0g:B (3.7) BS04 ATP 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 N/A
    833956 8j0j:A (2.7) BS01 Y01 ? GO:0005515 ... P42212
    Q9LD83
    37963863
    833957 8j0j:A (2.7) BS02 Y01 ? GO:0005515 ... P42212
    Q9LD83
    37963863
    833958 8j0j:B (2.7) BS01 Y01 ? GO:0005515 ... P42212
    Q9LD83
    37963863
    833959 8j0j:B (2.7) BS02 Y01 ? GO:0005515 ... P42212
    Q9LD83
    37963863
    833960 8j0j:C (2.7) BS01 Y01 ? GO:0005515 ... P42212
    Q9LD83
    37963863
    833961 8j0j:C (2.7) BS02 Y01 ? GO:0005515 ... P42212
    Q9LD83
    37963863
    833962 8j0k:A (2.1) BS01 dna ? GO:0003700 ... P05549 37409559
    833963 8j0k:A (2.1) BS02 dna ? GO:0003700 ... P05549 37409559
    833964 8j0k:A (2.1) BS03 PG3 ? GO:0003700 ... P05549 37409559
    833965 8j0k:B (2.1) BS01 dna ? GO:0003700 ... P05549 37409559
    833966 8j0k:B (2.1) BS02 dna ? GO:0003700 ... P05549 37409559
    833967 8j0k:B (2.1) BS03 PG3 ? GO:0003700 ... P05549 37409559
    833968 8j0r:A (2.1) BS01 dna ? GO:0003700 ... P05549 37409559
    833969 8j0r:A (2.1) BS02 dna ? GO:0003700 ... P05549 37409559
    833970 8j0r:A (2.1) BS03 PG3 ? GO:0003700 ... P05549 37409559
    833971 8j0r:B (2.1) BS01 dna ? GO:0003700 ... P05549 37409559
    833972 8j0r:B (2.1) BS02 dna ? GO:0003700 ... P05549 37409559
    833973 8j0s:1 (2.58) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    833974 8j0s:1 (2.58) BS02 BQ1 ? GO:0005886 ... P9WPS1 38961288
    833975 8j0s:2 (2.58) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    833976 8j0s:4 (2.58) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    833977 8j0s:5 (2.58) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    833978 8j0s:5 (2.58) BS02 BQ1 ? GO:0005886 ... P9WPS1 38961288
    833979 8j0s:6 (2.58) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    833980 8j0s:6 (2.58) BS02 BQ1 ? GO:0005886 ... P9WPS1 38961288
    833981 8j0s:7 (2.58) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    833982 8j0s:7 (2.58) BS02 BQ1 ? GO:0005886 ... P9WPS1 38961288
    833983 8j0s:8 (2.58) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    833984 8j0s:8 (2.58) BS02 BQ1 ? GO:0005886 ... P9WPS1 38961288
    833985 8j0s:9 (2.58) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    833986 8j0s:9 (2.58) BS02 BQ1 ? GO:0005886 ... P9WPS1 38961288
    833987 8j0s:A (2.58) BS01 ATP 7.1.2.2 GO:0005524 ... P9WPU7 38961288
    833988 8j0s:B (2.58) BS01 ATP 7.1.2.2 GO:0005524 ... P9WPU7 38961288
    833989 8j0s:C (2.58) BS01 ATP 7.1.2.2 GO:0005524 ... P9WPU7 38961288
    833990 8j0s:C (2.58) BS02 ADP 7.1.2.2 GO:0005524 ... P9WPU7 38961288
    833991 8j0s:D (2.58) BS01 ADP 7.1.2.2 GO:0005524 ... P9WPU5 38961288
    833992 8j0s:F (2.58) BS01 ADP 7.1.2.2 GO:0005524 ... P9WPU5 38961288
    833993 8j0s:a (2.58) BS01 BQ1 ? GO:0005886 ... P9WPV7 38961288
    833994 8j0s:a (2.58) BS02 BQ1 ? GO:0005886 ... P9WPV7 38961288
    833995 8j0t:A (2.8) BS01 ATP 7.1.2.2 GO:0005524 ... P9WPU7 38961288
    833996 8j0t:B (2.8) BS01 ATP 7.1.2.2 GO:0005524 ... P9WPU7 38961288
    833997 8j0t:C (2.8) BS01 ATP 7.1.2.2 GO:0005524 ... P9WPU7 38961288
    833998 8j0t:C (2.8) BS02 ADP 7.1.2.2 GO:0005524 ... P9WPU7 38961288
    833999 8j0t:D (2.8) BS01 ADP 7.1.2.2 GO:0005524 ... P9WPU5 38961288
    834000 8j0t:F (2.8) BS01 ADP 7.1.2.2 GO:0005524 ... P9WPU5 38961288

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).