SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    834201 8ir8:k (2.25) BS03 CLA ? GO:0005737 ... P19054 38297122
    834202 8ir8:o (2.25) BS01 CA ? GO:0009654 ... D0VWR2 38297122
    834203 8ir8:v (2.25) BS01 HEC ? GO:0005506 ... P0A387 38297122
    834204 8ir8:x (2.25) BS01 CLA ? GO:0009523 ... D0VWR4 38297122
    834205 8ir8:z (2.25) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    834206 8ir9:A (2.2) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    834207 8ir9:A (2.2) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834208 8ir9:A (2.2) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834209 8ir9:A (2.2) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834210 8ir9:A (2.2) BS05 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    834211 8ir9:A (2.2) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834212 8ir9:A (2.2) BS07 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    834213 8ir9:A (2.2) BS08 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    834214 8ir9:A (2.2) BS09 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    834215 8ir9:B (2.2) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    834216 8ir9:B (2.2) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    834217 8ir9:B (2.2) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    834218 8ir9:B (2.2) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    834219 8ir9:B (2.2) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    834220 8ir9:B (2.2) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    834221 8ir9:B (2.2) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    834222 8ir9:B (2.2) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    834223 8ir9:B (2.2) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    834224 8ir9:B (2.2) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    834225 8ir9:B (2.2) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    834226 8ir9:B (2.2) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    834227 8ir9:B (2.2) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    834228 8ir9:B (2.2) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    834229 8ir9:B (2.2) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    834230 8ir9:B (2.2) BS16 CLA ? GO:0009521 ... D0VWR1 38297122
    834231 8ir9:C (2.2) BS01 OEX ? GO:0005737 ... D0VWR7 38297122
    834232 8ir9:C (2.2) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    834233 8ir9:C (2.2) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    834234 8ir9:C (2.2) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    834235 8ir9:C (2.2) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    834236 8ir9:C (2.2) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    834237 8ir9:C (2.2) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    834238 8ir9:C (2.2) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    834239 8ir9:C (2.2) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    834240 8ir9:C (2.2) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    834241 8ir9:C (2.2) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    834242 8ir9:C (2.2) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    834243 8ir9:C (2.2) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    834244 8ir9:C (2.2) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    834245 8ir9:C (2.2) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    834246 8ir9:D (2.2) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834247 8ir9:D (2.2) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834248 8ir9:D (2.2) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834249 8ir9:D (2.2) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834250 8ir9:D (2.2) BS05 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834251 8ir9:D (2.2) BS06 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834252 8ir9:D (2.2) BS07 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834253 8ir9:D (2.2) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834254 8ir9:D (2.2) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834255 8ir9:E (2.2) BS01 HEM ? GO:0005506 ... P12238 38297122
    834256 8ir9:F (2.2) BS01 HEM ? GO:0005506 ... P12239 38297122
    834257 8ir9:H (2.2) BS01 CLA ? GO:0009523 ... P19052 38297122
    834258 8ir9:H (2.2) BS02 CLA ? GO:0009523 ... P19052 38297122
    834259 8ir9:H (2.2) BS03 CLA ? GO:0009523 ... P19052 38297122
    834260 8ir9:I (2.2) BS01 CLA ? GO:0005737 ... P12240 38297122
    834261 8ir9:J (2.2) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    834262 8ir9:K (2.2) BS01 peptide ? GO:0005737 ... P19054 38297122
    834263 8ir9:K (2.2) BS02 CLA ? GO:0005737 ... P19054 38297122
    834264 8ir9:K (2.2) BS03 CLA ? GO:0005737 ... P19054 38297122
    834265 8ir9:O (2.2) BS01 CA ? GO:0009654 ... D0VWR2 38297122
    834266 8ir9:V (2.2) BS01 HEC ? GO:0005506 ... P0A387 38297122
    834267 8ir9:Z (2.2) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    834268 8ir9:a (2.2) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    834269 8ir9:a (2.2) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834270 8ir9:a (2.2) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834271 8ir9:a (2.2) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834272 8ir9:a (2.2) BS05 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    834273 8ir9:a (2.2) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834274 8ir9:a (2.2) BS07 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    834275 8ir9:a (2.2) BS08 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    834276 8ir9:a (2.2) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    834277 8ir9:b (2.2) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    834278 8ir9:b (2.2) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    834279 8ir9:b (2.2) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    834280 8ir9:b (2.2) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    834281 8ir9:b (2.2) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    834282 8ir9:b (2.2) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    834283 8ir9:b (2.2) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    834284 8ir9:b (2.2) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    834285 8ir9:b (2.2) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    834286 8ir9:b (2.2) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    834287 8ir9:b (2.2) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    834288 8ir9:b (2.2) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    834289 8ir9:b (2.2) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    834290 8ir9:b (2.2) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    834291 8ir9:b (2.2) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    834292 8ir9:c (2.2) BS01 OEX ? GO:0005737 ... D0VWR7 38297122
    834293 8ir9:c (2.2) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    834294 8ir9:c (2.2) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    834295 8ir9:c (2.2) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    834296 8ir9:c (2.2) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    834297 8ir9:c (2.2) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    834298 8ir9:c (2.2) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    834299 8ir9:c (2.2) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    834300 8ir9:c (2.2) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    834301 8ir9:c (2.2) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    834302 8ir9:c (2.2) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    834303 8ir9:c (2.2) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    834304 8ir9:c (2.2) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    834305 8ir9:c (2.2) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    834306 8ir9:c (2.2) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    834307 8ir9:c (2.2) BS16 CA ? GO:0005737 ... D0VWR7 38297122
    834308 8ir9:d (2.2) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834309 8ir9:d (2.2) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834310 8ir9:d (2.2) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834311 8ir9:d (2.2) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834312 8ir9:d (2.2) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834313 8ir9:d (2.2) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834314 8ir9:d (2.2) BS07 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834315 8ir9:d (2.2) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834316 8ir9:d (2.2) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834317 8ir9:e (2.2) BS01 HEM ? GO:0005506 ... P12238 38297122
    834318 8ir9:f (2.2) BS01 HEM ? GO:0005506 ... P12239 38297122
    834319 8ir9:h (2.2) BS01 CLA ? GO:0009523 ... P19052 38297122
    834320 8ir9:h (2.2) BS02 CLA ? GO:0009523 ... P19052 38297122
    834321 8ir9:h (2.2) BS03 CLA ? GO:0009523 ... P19052 38297122
    834322 8ir9:h (2.2) BS04 CLA ? GO:0009523 ... P19052 38297122
    834323 8ir9:i (2.2) BS01 CLA ? GO:0005737 ... P12240 38297122
    834324 8ir9:j (2.2) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    834325 8ir9:k (2.2) BS01 peptide ? GO:0005737 ... P19054 38297122
    834326 8ir9:k (2.2) BS02 CLA ? GO:0005737 ... P19054 38297122
    834327 8ir9:k (2.2) BS03 CLA ? GO:0005737 ... P19054 38297122
    834328 8ir9:o (2.2) BS01 CA ? GO:0009654 ... D0VWR2 38297122
    834329 8ir9:v (2.2) BS01 HEC ? GO:0005506 ... P0A387 38297122
    834330 8ir9:z (2.2) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    834331 8ira:A (2.2) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    834332 8ira:A (2.2) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834333 8ira:A (2.2) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834334 8ira:A (2.2) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834335 8ira:A (2.2) BS05 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    834336 8ira:A (2.2) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834337 8ira:A (2.2) BS07 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    834338 8ira:A (2.2) BS08 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    834339 8ira:A (2.2) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    834340 8ira:B (2.2) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    834341 8ira:B (2.2) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    834342 8ira:B (2.2) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    834343 8ira:B (2.2) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    834344 8ira:B (2.2) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    834345 8ira:B (2.2) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    834346 8ira:B (2.2) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    834347 8ira:B (2.2) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    834348 8ira:B (2.2) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    834349 8ira:B (2.2) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    834350 8ira:B (2.2) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    834351 8ira:B (2.2) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    834352 8ira:B (2.2) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    834353 8ira:B (2.2) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    834354 8ira:B (2.2) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    834355 8ira:B (2.2) BS16 CLA ? GO:0009521 ... D0VWR1 38297122
    834356 8ira:C (2.2) BS01 OEX ? GO:0005737 ... D0VWR7 38297122
    834357 8ira:C (2.2) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    834358 8ira:C (2.2) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    834359 8ira:C (2.2) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    834360 8ira:C (2.2) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    834361 8ira:C (2.2) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    834362 8ira:C (2.2) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    834363 8ira:C (2.2) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    834364 8ira:C (2.2) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    834365 8ira:C (2.2) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    834366 8ira:C (2.2) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    834367 8ira:C (2.2) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    834368 8ira:C (2.2) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    834369 8ira:C (2.2) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    834370 8ira:C (2.2) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    834371 8ira:D (2.2) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834372 8ira:D (2.2) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834373 8ira:D (2.2) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834374 8ira:D (2.2) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834375 8ira:D (2.2) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834376 8ira:D (2.2) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834377 8ira:D (2.2) BS07 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834378 8ira:D (2.2) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834379 8ira:D (2.2) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834380 8ira:E (2.2) BS01 HEM ? GO:0005506 ... P12238 38297122
    834381 8ira:F (2.2) BS01 HEM ? GO:0005506 ... P12239 38297122
    834382 8ira:H (2.2) BS01 CLA ? GO:0009523 ... P19052 38297122
    834383 8ira:H (2.2) BS02 CLA ? GO:0009523 ... P19052 38297122
    834384 8ira:H (2.2) BS03 CLA ? GO:0009523 ... P19052 38297122
    834385 8ira:H (2.2) BS04 CLA ? GO:0009523 ... P19052 38297122
    834386 8ira:I (2.2) BS01 CLA ? GO:0005737 ... P12240 38297122
    834387 8ira:J (2.2) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    834388 8ira:K (2.2) BS01 peptide ? GO:0005737 ... P19054 38297122
    834389 8ira:K (2.2) BS02 CLA ? GO:0005737 ... P19054 38297122
    834390 8ira:K (2.2) BS03 CLA ? GO:0005737 ... P19054 38297122
    834391 8ira:O (2.2) BS01 CA ? GO:0009654 ... D0VWR2 38297122
    834392 8ira:V (2.2) BS01 HEC ? GO:0005506 ... P0A387 38297122
    834393 8ira:X (2.2) BS01 CLA ? GO:0009523 ... D0VWR4 38297122
    834394 8ira:Z (2.2) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    834395 8ira:a (2.2) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    834396 8ira:a (2.2) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834397 8ira:a (2.2) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834398 8ira:a (2.2) BS04 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    834399 8ira:a (2.2) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834400 8ira:a (2.2) BS06 OEX 1.10.3.9 GO:0005506 ... P51765 38297122

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).