SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    834201 8j3y:A (1.28) BS03 BGC ? GO:0030246 ... Q21KS2 38515133
    834202 8j3y:A (1.28) BS04 BGC ? GO:0030246 ... Q21KS2 38515133
    834203 8j3y:A (1.28) BS05 BGC ? GO:0030246 ... Q21KS2 38515133
    834204 8j3y:A (1.28) BS06 BGC ? GO:0030246 ... Q21KS2 38515133
    834205 8j3y:A (1.28) BS07 BGC ? GO:0030246 ... Q21KS2 38515133
    834206 8j3y:A (1.28) BS08 BGC ? GO:0030246 ... Q21KS2 38515133
    834207 8j3y:A (1.28) BS09 MG ? GO:0030246 ... Q21KS2 38515133
    834208 8j3y:B (1.28) BS01 BGC ? GO:0030246 ... Q21KS2 38515133
    834209 8j3y:B (1.28) BS02 BGC ? GO:0030246 ... Q21KS2 38515133
    834210 8j3y:B (1.28) BS03 BGC ? GO:0030246 ... Q21KS2 38515133
    834211 8j3y:B (1.28) BS04 BGC ? GO:0030246 ... Q21KS2 38515133
    834212 8j3y:B (1.28) BS05 BGC ? GO:0030246 ... Q21KS2 38515133
    834213 8j3y:B (1.28) BS06 BGC ? GO:0030246 ... Q21KS2 38515133
    834214 8j3y:B (1.28) BS07 BGC ? GO:0030246 ... Q21KS2 38515133
    834215 8j3y:B (1.28) BS08 BGC ? GO:0030246 ... Q21KS2 38515133
    834216 8j3y:B (1.28) BS09 MG ? GO:0030246 ... Q21KS2 38515133
    834217 8j3z:A (3.17) BS01 ATP 7.6.2.-
    7.6.2.2
    7.6.2.3
    GO:0001409 ... O15439 N/A
    834218 8j3z:A (3.17) BS02 PUC 7.6.2.-
    7.6.2.2
    7.6.2.3
    GO:0001409 ... O15439 N/A
    834219 8j3z:A (3.17) BS03 MG 7.6.2.-
    7.6.2.2
    7.6.2.3
    GO:0001409 ... O15439 N/A
    834220 8j3z:A (3.17) BS04 ATP 7.6.2.-
    7.6.2.2
    7.6.2.3
    GO:0001409 ... O15439 N/A
    834221 8j40:A (1.57) BS01 CLM 2.3.1.28 GO:0016740 ... Q6Q627 38311919
    834222 8j40:A (1.57) BS02 CLM 2.3.1.28 GO:0016740 ... Q6Q627 38311919
    834223 8j40:A (1.57) BS03 CLM 2.3.1.28 GO:0016740 ... Q6Q627 38311919
    834224 8j40:A (1.57) BS04 CLM 2.3.1.28 GO:0016740 ... Q6Q627 38311919
    834225 8j43:A (2.03) BS01 NAP ? GO:0016491 ... I8QLV7 N/A
    834226 8j43:A (2.03) BS02 NAP ? GO:0016491 ... I8QLV7 N/A
    834227 8j43:B (2.03) BS01 NAP ? GO:0016491 ... I8QLV7 N/A
    834228 8j43:B (2.03) BS02 NAP ? GO:0016491 ... I8QLV7 N/A
    834229 8j44:A (2.25) BS01 NAP ? GO:0016491 ... D9X416 N/A
    834230 8j44:B (2.25) BS01 NAP ? GO:0016491 ... D9X416 N/A
    834231 8j48:A (1.94) BS01 ZN ? GO:0006355 ... Q8LC79 38326322
    834232 8j48:D (1.94) BS01 ZN ? GO:0006355 ... Q8LC79 38326322
    834233 8j49:A (1.66) BS01 ZN ? GO:0003677 ... Q9S758 38326322
    834234 8j49:A (1.66) BS02 ZN ? GO:0003677 ... Q9S758 38326322
    834235 8j4b:B (2.0) BS01 ZN ? GO:0003677 ... P0DI11 38326322
    834236 8j4b:B (2.0) BS02 ZN ? GO:0003677 ... P0DI11 38326322
    834237 8j4b:D (2.0) BS01 ZN ? GO:0003677 ... P0DI11 38326322
    834238 8j4b:D (2.0) BS02 ZN ? GO:0003677 ... P0DI11 38326322
    834239 8j4c:A (3.34) BS01 THJ ? GO:0005886 ... G0GAP6 38656967
    834240 8j4c:B (3.34) BS01 THJ ? GO:0005886 ... G0GAP6 38656967
    834241 8j4f:A (3.0) BS01 UK0 ? GO:0001518 ... Q15858 37270609
    834242 8j4f:A (3.0) BS02 Y01 ? GO:0001518 ... Q15858 37270609
    834243 8j4f:A (3.0) BS03 Y01 ? GO:0001518 ... Q15858 37270609
    834244 8j4f:A (3.0) BS04 9Z9 ? GO:0001518 ... Q15858 37270609
    834245 8j4f:A (3.0) BS05 LPE ? GO:0001518 ... Q15858 37270609
    834246 8j4f:A (3.0) BS06 LPE ? GO:0001518 ... Q15858 37270609
    834247 8j4f:A (3.0) BS07 LPE ? GO:0001518 ... Q15858 37270609
    834248 8j4f:A (3.0) BS08 LPE ? GO:0001518 ... Q15858 37270609
    834249 8j4f:A (3.0) BS09 LPE ? GO:0001518 ... Q15858 37270609
    834250 8j4f:A (3.0) BS10 LPE ? GO:0001518 ... Q15858 37270609
    834251 8j4f:A (3.0) BS11 LPE ? GO:0001518 ... Q15858 37270609
    834252 8j4f:A (3.0) BS12 LPE ? GO:0001518 ... Q15858 37270609
    834253 8j4f:A (3.0) BS13 Y01 ? GO:0001518 ... Q15858 37270609
    834254 8j4f:A (3.0) BS14 LPE ? GO:0001518 ... Q15858 37270609
    834255 8j4f:B (3.0) BS01 LPE ? GO:0001518 ... Q07699 37270609
    834256 8j4g:A (2.49) BS01 peptide ? N/A A0A1L5SLS9 N/A
    834257 8j4g:D (2.49) BS01 peptide ? N/A A0A1L5SLS9 N/A
    834258 8j4h:A (2.01) BS01 TO9 N/A N/A N/A 38143427
    834259 8j4j:A (2.15) BS01 CO3 N/A N/A N/A 38143427
    834260 8j4k:A (1.46) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    834261 8j4k:A (1.46) BS02 9UU 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    834262 8j4l:A (1.45) BS01 HEM 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    834263 8j4l:A (1.45) BS02 EBJ 1.11.1.-
    1.7.-.-
    GO:0004601 ... P02185 N/A
    834264 8j4q:A (2.1) BS01 HEM 1.11.1.6 GO:0004096 ... A0A6I8WFM0 N/A
    834265 8j4q:B (2.1) BS01 HEM 1.11.1.6 GO:0004096 ... A0A6I8WFM0 N/A
    834266 8j4q:C (2.1) BS01 HEM 1.11.1.6 GO:0004096 ... A0A6I8WFM0 N/A
    834267 8j4q:D (2.1) BS01 HEM 1.11.1.6 GO:0004096 ... A0A6I8WFM0 N/A
    834268 8j4r:A (2.5) BS01 HEM 1.11.1.6 GO:0004096 ... A0A6I8WFM0 N/A
    834269 8j4r:B (2.5) BS01 HEM 1.11.1.6 GO:0004096 ... A0A6I8WFM0 N/A
    834270 8j4r:C (2.5) BS01 HEM 1.11.1.6 GO:0004096 ... A0A6I8WFM0 N/A
    834271 8j4r:D (2.5) BS01 HEM 1.11.1.6 GO:0004096 ... A0A6I8WFM0 N/A
    834272 8j4u:A (2.97) BS01 AR6 N/A N/A N/A 38096825
    834273 8j4u:B (2.97) BS01 AR6 N/A N/A N/A 38096825
    834274 8j4u:C (2.97) BS01 AR6 N/A N/A N/A 38096825
    834275 8j4u:D (2.97) BS01 AR6 N/A N/A N/A 38096825
    834276 8j4u:E (2.97) BS01 AR6 N/A N/A N/A 38096825
    834277 8j4u:F (2.97) BS01 AR6 N/A N/A N/A 38096825
    834278 8j4u:G (2.97) BS01 AR6 N/A N/A N/A 38096825
    834279 8j4u:H (2.97) BS01 AR6 N/A N/A N/A 38096825
    834280 8j4u:I (2.97) BS01 AR6 N/A N/A N/A 38096825
    834281 8j4u:J (2.97) BS01 AR6 N/A N/A N/A 38096825
    834282 8j4u:K (2.97) BS01 AR6 N/A N/A N/A 38096825
    834283 8j4u:L (2.97) BS01 AR6 N/A N/A N/A 38096825
    834284 8j4u:M (2.97) BS01 AGS N/A N/A N/A 38096825
    834285 8j4u:N (2.97) BS01 AGS N/A N/A N/A 38096825
    834286 8j4u:O (2.97) BS01 AGS N/A N/A N/A 38096825
    834287 8j4u:P (2.97) BS01 AGS N/A N/A N/A 38096825
    834288 8j4u:Q (2.97) BS01 AGS N/A N/A N/A 38096825
    834289 8j4v:C (1.11) BS01 FMN N/A GO:0010181 ... P9WIZ3 39399574
    834290 8j4v:C (1.11) BS02 PO4 N/A GO:0010181 ... P9WIZ3 39399574
    834291 8j4w:C (1.21) BS01 FMN N/A GO:0010181 ... P9WIZ3 39399574
    834292 8j4w:C (1.21) BS02 SO3 N/A GO:0010181 ... P9WIZ3 39399574
    834293 8j4w:C (1.21) BS03 PER N/A GO:0010181 ... P9WIZ3 39399574
    834294 8j4x:A (3.04) BS01 MN N/A GO:0004748 ... P9WH71 39399574
    834295 8j4x:A (3.04) BS02 MN N/A GO:0004748 ... P9WH71 39399574
    834296 8j4x:B (3.04) BS01 MN N/A GO:0004748 ... P9WH71 39399574
    834297 8j4x:B (3.04) BS02 MN N/A GO:0004748 ... P9WH71 39399574
    834298 8j4x:C (3.04) BS01 MN N/A GO:0004748 ... P9WH71 39399574
    834299 8j4x:C (3.04) BS02 MN N/A GO:0004748 ... P9WH71 39399574
    834300 8j4x:D (3.04) BS01 MN N/A GO:0004748 ... P9WH71 39399574
    834301 8j4x:D (3.04) BS02 MN N/A GO:0004748 ... P9WH71 39399574
    834302 8j4x:E (3.04) BS01 MN N/A GO:0004748 ... P9WH71 39399574
    834303 8j4x:E (3.04) BS02 MN N/A GO:0004748 ... P9WH71 39399574
    834304 8j4x:F (3.04) BS01 MN N/A GO:0004748 ... P9WH71 39399574
    834305 8j4x:F (3.04) BS02 MN N/A GO:0004748 ... P9WH71 39399574
    834306 8j4x:G (3.04) BS01 FMN N/A GO:0010181 ... P9WIZ3 39399574
    834307 8j4x:I (3.04) BS01 FMN N/A GO:0010181 ... P9WIZ3 39399574
    834308 8j4y:A (3.02) BS01 MN N/A GO:0004748 ... P9WH71 39399574
    834309 8j4y:A (3.02) BS02 MN N/A GO:0004748 ... P9WH71 39399574
    834310 8j4y:A (3.02) BS03 PER N/A GO:0004748 ... P9WH71 39399574
    834311 8j4y:B (3.02) BS01 MN N/A GO:0004748 ... P9WH71 39399574
    834312 8j4y:B (3.02) BS02 MN N/A GO:0004748 ... P9WH71 39399574
    834313 8j4y:C (3.02) BS01 MN N/A GO:0004748 ... P9WH71 39399574
    834314 8j4y:C (3.02) BS02 MN N/A GO:0004748 ... P9WH71 39399574
    834315 8j4y:C (3.02) BS03 FMN N/A GO:0004748 ... P9WH71 39399574
    834316 8j4y:D (3.02) BS01 MN N/A GO:0004748 ... P9WH71 39399574
    834317 8j4y:D (3.02) BS02 MN N/A GO:0004748 ... P9WH71 39399574
    834318 8j4y:D (3.02) BS03 PER N/A GO:0004748 ... P9WH71 39399574
    834319 8j4y:E (3.02) BS01 MN N/A GO:0004748 ... P9WH71 39399574
    834320 8j4y:E (3.02) BS02 MN N/A GO:0004748 ... P9WH71 39399574
    834321 8j4y:F (3.02) BS01 MN N/A GO:0004748 ... P9WH71 39399574
    834322 8j4y:F (3.02) BS02 MN N/A GO:0004748 ... P9WH71 39399574
    834323 8j4y:F (3.02) BS03 PER N/A GO:0004748 ... P9WH71 39399574
    834324 8j4y:F (3.02) BS04 FMN N/A GO:0004748 ... P9WH71 39399574
    834325 8j4y:G (3.02) BS01 FMN N/A GO:0010181 ... P9WIZ3 39399574
    834326 8j4y:I (3.02) BS01 FMN N/A GO:0010181 ... P9WIZ3 39399574
    834327 8j4z:A (2.73) BS01 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834328 8j4z:A (2.73) BS02 TW3 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834329 8j4z:A (2.73) BS03 TW3 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834330 8j4z:A (2.73) BS04 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834331 8j4z:C (2.73) BS01 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834332 8j4z:C (2.73) BS02 TW3 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834333 8j4z:C (2.73) BS03 TW3 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834334 8j4z:C (2.73) BS04 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834335 8j4z:F (2.73) BS01 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834336 8j4z:F (2.73) BS02 TW3 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834337 8j4z:F (2.73) BS03 TW3 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834338 8j4z:F (2.73) BS04 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834339 8j4z:H (2.73) BS01 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834340 8j4z:H (2.73) BS02 TW3 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834341 8j4z:H (2.73) BS03 TW3 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834342 8j4z:H (2.73) BS04 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834343 8j4z:J (2.73) BS01 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834344 8j4z:J (2.73) BS02 TW3 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834345 8j4z:J (2.73) BS03 TW3 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834346 8j4z:J (2.73) BS04 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834347 8j4z:K (2.73) BS01 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834348 8j4z:K (2.73) BS02 TW3 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834349 8j4z:K (2.73) BS03 TW3 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834350 8j4z:K (2.73) BS04 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    834351 8j51:A (2.15) BS01 GLA 3.2.1.22 GO:0004553 ... A0A0E9MUN5 37438884
    834352 8j51:A (2.15) BS02 GAL 3.2.1.22 GO:0004553 ... A0A0E9MUN5 37438884
    834353 8j51:B (2.15) BS01 GLA 3.2.1.22 GO:0004553 ... A0A0E9MUN5 37438884
    834354 8j51:B (2.15) BS02 GAL 3.2.1.22 GO:0004553 ... A0A0E9MUN5 37438884
    834355 8j52:A (1.9) BS01 GLA 3.2.1.22 GO:0004553 ... A0A0E9MUN5 37438884
    834356 8j52:A (1.9) BS02 GAL 3.2.1.22 GO:0004553 ... A0A0E9MUN5 37438884
    834357 8j52:B (1.9) BS01 GLA 3.2.1.22 GO:0004553 ... A0A0E9MUN5 37438884
    834358 8j52:B (1.9) BS02 GAL 3.2.1.22 GO:0004553 ... A0A0E9MUN5 37438884
    834359 8j54:C (2.72) BS01 dna ? GO:0003700 ... P28700 38309263
    834360 8j54:C (2.72) BS02 dna ? GO:0003700 ... P28700 38309263
    834361 8j54:C (2.72) BS03 ZN ? GO:0003700 ... P28700 38309263
    834362 8j54:C (2.72) BS04 ZN ? GO:0003700 ... P28700 38309263
    834363 8j54:D (2.72) BS01 dna ? GO:0003700 ... P28700 38309263
    834364 8j54:D (2.72) BS02 dna ? GO:0003700 ... P28700 38309263
    834365 8j54:D (2.72) BS03 ZN ? GO:0003700 ... P28700 38309263
    834366 8j54:E (2.72) BS01 dna ? GO:0003700 ... P28700 38309263
    834367 8j54:E (2.72) BS02 dna ? GO:0003700 ... P28700 38309263
    834368 8j54:E (2.72) BS03 ZN ? GO:0003700 ... P28700 38309263
    834369 8j54:E (2.72) BS04 ZN ? GO:0003700 ... P28700 38309263
    834370 8j54:F (2.72) BS01 dna ? GO:0003700 ... P28700 38309263
    834371 8j54:F (2.72) BS02 dna ? GO:0003700 ... P28700 38309263
    834372 8j54:F (2.72) BS03 ZN ? GO:0003700 ... P28700 38309263
    834373 8j54:F (2.72) BS04 ZN ? GO:0003700 ... P28700 38309263
    834374 8j56:C (3.5) BS01 ZN ? GO:0003677 ... Q0K4N7 37343320
    834375 8j56:F (3.5) BS01 ZN ? GO:0003677 ... Q0K4N7 37343320
    834376 8j57:1 (2.85) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    834377 8j57:1 (2.85) BS02 BQ1 ? GO:0005886 ... P9WPS1 38961288
    834378 8j57:2 (2.85) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    834379 8j57:4 (2.85) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    834380 8j57:5 (2.85) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    834381 8j57:6 (2.85) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    834382 8j57:6 (2.85) BS02 BQ1 ? GO:0005886 ... P9WPS1 38961288
    834383 8j57:7 (2.85) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    834384 8j57:7 (2.85) BS02 BQ1 ? GO:0005886 ... P9WPS1 38961288
    834385 8j57:8 (2.85) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    834386 8j57:8 (2.85) BS02 BQ1 ? GO:0005886 ... P9WPS1 38961288
    834387 8j57:9 (2.85) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    834388 8j57:9 (2.85) BS02 BQ1 ? GO:0005886 ... P9WPS1 38961288
    834389 8j57:a (2.85) BS01 BQ1 ? GO:0005886 ... P9WPV7 38961288
    834390 8j57:a (2.85) BS02 BQ1 ? GO:0005886 ... P9WPV7 38961288
    834391 8j59:A (1.55) BS01 FMN 1.6.99.1 GO:0003959 ... B8N8Q9 38229304
    834392 8j59:B (1.55) BS01 FMN 1.6.99.1 GO:0003959 ... B8N8Q9 38229304
    834393 8j5e:A (1.7) BS01 TQR ? N/A N/A N/A
    834394 8j5f:A (1.7) BS01 CTN ? N/A N/A N/A
    834395 8j5f:A (1.7) BS02 ADP ? N/A N/A N/A
    834396 8j5g:A (1.5) BS01 TT9 ? N/A N/A N/A
    834397 8j5h:A (1.4) BS01 TV0 ? N/A N/A N/A
    834398 8j5k:0 (2.93) BS01 ET4 N/A GO:0009765 ... N/A 38071196
    834399 8j5k:0 (2.93) BS02 A86 N/A GO:0009765 ... N/A 38071196
    834400 8j5k:0 (2.93) BS03 CLA N/A GO:0009765 ... N/A 38071196

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).