SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    834601 8irc:B (2.25) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    834602 8irc:B (2.25) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    834603 8irc:B (2.25) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    834604 8irc:B (2.25) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    834605 8irc:B (2.25) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    834606 8irc:B (2.25) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    834607 8irc:B (2.25) BS16 CLA ? GO:0009521 ... D0VWR1 38297122
    834608 8irc:C (2.25) BS01 OEX ? GO:0005737 ... D0VWR7 38297122
    834609 8irc:C (2.25) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    834610 8irc:C (2.25) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    834611 8irc:C (2.25) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    834612 8irc:C (2.25) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    834613 8irc:C (2.25) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    834614 8irc:C (2.25) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    834615 8irc:C (2.25) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    834616 8irc:C (2.25) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    834617 8irc:C (2.25) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    834618 8irc:C (2.25) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    834619 8irc:C (2.25) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    834620 8irc:C (2.25) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    834621 8irc:C (2.25) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    834622 8irc:C (2.25) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    834623 8irc:D (2.25) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834624 8irc:D (2.25) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834625 8irc:D (2.25) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834626 8irc:D (2.25) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834627 8irc:D (2.25) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834628 8irc:D (2.25) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834629 8irc:D (2.25) BS07 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834630 8irc:D (2.25) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834631 8irc:D (2.25) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834632 8irc:E (2.25) BS01 HEM ? GO:0005506 ... P12238 38297122
    834633 8irc:F (2.25) BS01 HEM ? GO:0005506 ... P12239 38297122
    834634 8irc:H (2.25) BS01 CLA ? GO:0009523 ... P19052 38297122
    834635 8irc:H (2.25) BS02 CLA ? GO:0009523 ... P19052 38297122
    834636 8irc:H (2.25) BS03 CLA ? GO:0009523 ... P19052 38297122
    834637 8irc:I (2.25) BS01 CLA ? GO:0005737 ... P12240 38297122
    834638 8irc:J (2.25) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    834639 8irc:K (2.25) BS01 peptide ? GO:0005737 ... P19054 38297122
    834640 8irc:K (2.25) BS02 CLA ? GO:0005737 ... P19054 38297122
    834641 8irc:K (2.25) BS03 CLA ? GO:0005737 ... P19054 38297122
    834642 8irc:O (2.25) BS01 CA ? GO:0009654 ... D0VWR2 38297122
    834643 8irc:V (2.25) BS01 HEC ? GO:0005506 ... P0A387 38297122
    834644 8irc:Z (2.25) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    834645 8irc:a (2.25) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    834646 8irc:a (2.25) BS02 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    834647 8irc:a (2.25) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834648 8irc:a (2.25) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834649 8irc:a (2.25) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834650 8irc:a (2.25) BS06 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    834651 8irc:a (2.25) BS07 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834652 8irc:a (2.25) BS08 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    834653 8irc:a (2.25) BS09 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    834654 8irc:b (2.25) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    834655 8irc:b (2.25) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    834656 8irc:b (2.25) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    834657 8irc:b (2.25) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    834658 8irc:b (2.25) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    834659 8irc:b (2.25) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    834660 8irc:b (2.25) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    834661 8irc:b (2.25) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    834662 8irc:b (2.25) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    834663 8irc:b (2.25) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    834664 8irc:b (2.25) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    834665 8irc:b (2.25) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    834666 8irc:b (2.25) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    834667 8irc:b (2.25) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    834668 8irc:b (2.25) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    834669 8irc:b (2.25) BS16 CLA ? GO:0009521 ... D0VWR1 38297122
    834670 8irc:c (2.25) BS01 OEX ? GO:0005737 ... D0VWR7 38297122
    834671 8irc:c (2.25) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    834672 8irc:c (2.25) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    834673 8irc:c (2.25) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    834674 8irc:c (2.25) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    834675 8irc:c (2.25) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    834676 8irc:c (2.25) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    834677 8irc:c (2.25) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    834678 8irc:c (2.25) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    834679 8irc:c (2.25) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    834680 8irc:c (2.25) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    834681 8irc:c (2.25) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    834682 8irc:c (2.25) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    834683 8irc:c (2.25) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    834684 8irc:c (2.25) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    834685 8irc:c (2.25) BS16 CA ? GO:0005737 ... D0VWR7 38297122
    834686 8irc:d (2.25) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834687 8irc:d (2.25) BS02 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834688 8irc:d (2.25) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834689 8irc:d (2.25) BS04 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834690 8irc:d (2.25) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834691 8irc:d (2.25) BS06 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834692 8irc:d (2.25) BS07 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834693 8irc:d (2.25) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834694 8irc:d (2.25) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834695 8irc:e (2.25) BS01 HEM ? GO:0005506 ... P12238 38297122
    834696 8irc:f (2.25) BS01 HEM ? GO:0005506 ... P12239 38297122
    834697 8irc:h (2.25) BS01 CLA ? GO:0009523 ... P19052 38297122
    834698 8irc:h (2.25) BS02 CLA ? GO:0009523 ... P19052 38297122
    834699 8irc:h (2.25) BS03 CLA ? GO:0009523 ... P19052 38297122
    834700 8irc:i (2.25) BS01 CLA ? GO:0005737 ... P12240 38297122
    834701 8irc:j (2.25) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    834702 8irc:k (2.25) BS01 peptide ? GO:0005737 ... P19054 38297122
    834703 8irc:k (2.25) BS02 CLA ? GO:0005737 ... P19054 38297122
    834704 8irc:k (2.25) BS03 CLA ? GO:0005737 ... P19054 38297122
    834705 8irc:o (2.25) BS01 CA ? GO:0009654 ... D0VWR2 38297122
    834706 8irc:v (2.25) BS01 HEC ? GO:0005506 ... P0A387 38297122
    834707 8irc:x (2.25) BS01 CLA ? GO:0009523 ... D0VWR4 38297122
    834708 8irc:z (2.25) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    834709 8ird:A (2.3) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    834710 8ird:A (2.3) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834711 8ird:A (2.3) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834712 8ird:A (2.3) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834713 8ird:A (2.3) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834714 8ird:A (2.3) BS06 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    834715 8ird:A (2.3) BS07 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    834716 8ird:A (2.3) BS08 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    834717 8ird:A (2.3) BS09 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    834718 8ird:B (2.3) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    834719 8ird:B (2.3) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    834720 8ird:B (2.3) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    834721 8ird:B (2.3) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    834722 8ird:B (2.3) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    834723 8ird:B (2.3) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    834724 8ird:B (2.3) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    834725 8ird:B (2.3) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    834726 8ird:B (2.3) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    834727 8ird:B (2.3) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    834728 8ird:B (2.3) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    834729 8ird:B (2.3) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    834730 8ird:B (2.3) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    834731 8ird:B (2.3) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    834732 8ird:B (2.3) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    834733 8ird:B (2.3) BS16 CLA ? GO:0009521 ... D0VWR1 38297122
    834734 8ird:C (2.3) BS01 OEX ? GO:0005737 ... D0VWR7 38297122
    834735 8ird:C (2.3) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    834736 8ird:C (2.3) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    834737 8ird:C (2.3) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    834738 8ird:C (2.3) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    834739 8ird:C (2.3) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    834740 8ird:C (2.3) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    834741 8ird:C (2.3) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    834742 8ird:C (2.3) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    834743 8ird:C (2.3) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    834744 8ird:C (2.3) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    834745 8ird:C (2.3) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    834746 8ird:C (2.3) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    834747 8ird:C (2.3) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    834748 8ird:C (2.3) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    834749 8ird:D (2.3) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834750 8ird:D (2.3) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834751 8ird:D (2.3) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834752 8ird:D (2.3) BS04 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834753 8ird:D (2.3) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834754 8ird:D (2.3) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834755 8ird:D (2.3) BS07 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834756 8ird:D (2.3) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834757 8ird:D (2.3) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834758 8ird:E (2.3) BS01 HEM ? GO:0005506 ... P12238 38297122
    834759 8ird:F (2.3) BS01 HEM ? GO:0005506 ... P12239 38297122
    834760 8ird:H (2.3) BS01 CLA ? GO:0009523 ... P19052 38297122
    834761 8ird:H (2.3) BS02 CLA ? GO:0009523 ... P19052 38297122
    834762 8ird:H (2.3) BS03 CLA ? GO:0009523 ... P19052 38297122
    834763 8ird:I (2.3) BS01 CLA ? GO:0005737 ... P12240 38297122
    834764 8ird:J (2.3) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    834765 8ird:K (2.3) BS01 peptide ? GO:0005737 ... P19054 38297122
    834766 8ird:K (2.3) BS02 CLA ? GO:0005737 ... P19054 38297122
    834767 8ird:K (2.3) BS03 CLA ? GO:0005737 ... P19054 38297122
    834768 8ird:O (2.3) BS01 CA ? GO:0009654 ... D0VWR2 38297122
    834769 8ird:V (2.3) BS01 HEC ? GO:0005506 ... P0A387 38297122
    834770 8ird:Z (2.3) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    834771 8ird:a (2.3) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    834772 8ird:a (2.3) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834773 8ird:a (2.3) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834774 8ird:a (2.3) BS04 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    834775 8ird:a (2.3) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834776 8ird:a (2.3) BS06 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    834777 8ird:a (2.3) BS07 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    834778 8ird:a (2.3) BS08 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    834779 8ird:a (2.3) BS09 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834780 8ird:b (2.3) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    834781 8ird:b (2.3) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    834782 8ird:b (2.3) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    834783 8ird:b (2.3) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    834784 8ird:b (2.3) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    834785 8ird:b (2.3) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    834786 8ird:b (2.3) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    834787 8ird:b (2.3) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    834788 8ird:b (2.3) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    834789 8ird:b (2.3) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    834790 8ird:b (2.3) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    834791 8ird:b (2.3) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    834792 8ird:b (2.3) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    834793 8ird:b (2.3) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    834794 8ird:b (2.3) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    834795 8ird:c (2.3) BS01 OEX ? GO:0005737 ... D0VWR7 38297122
    834796 8ird:c (2.3) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    834797 8ird:c (2.3) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    834798 8ird:c (2.3) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    834799 8ird:c (2.3) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    834800 8ird:c (2.3) BS06 CLA ? GO:0005737 ... D0VWR7 38297122

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).