SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    834801 8ird:c (2.3) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    834802 8ird:c (2.3) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    834803 8ird:c (2.3) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    834804 8ird:c (2.3) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    834805 8ird:c (2.3) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    834806 8ird:c (2.3) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    834807 8ird:c (2.3) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    834808 8ird:c (2.3) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    834809 8ird:c (2.3) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    834810 8ird:c (2.3) BS16 CA ? GO:0005737 ... D0VWR7 38297122
    834811 8ird:d (2.3) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834812 8ird:d (2.3) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834813 8ird:d (2.3) BS03 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834814 8ird:d (2.3) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834815 8ird:d (2.3) BS05 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834816 8ird:d (2.3) BS06 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834817 8ird:d (2.3) BS07 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834818 8ird:d (2.3) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834819 8ird:d (2.3) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834820 8ird:e (2.3) BS01 HEM ? GO:0005506 ... P12238 38297122
    834821 8ird:f (2.3) BS01 HEM ? GO:0005506 ... P12239 38297122
    834822 8ird:h (2.3) BS01 CLA ? GO:0009523 ... P19052 38297122
    834823 8ird:h (2.3) BS02 CLA ? GO:0009523 ... P19052 38297122
    834824 8ird:h (2.3) BS03 CLA ? GO:0009523 ... P19052 38297122
    834825 8ird:i (2.3) BS01 CLA ? GO:0005737 ... P12240 38297122
    834826 8ird:j (2.3) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    834827 8ird:k (2.3) BS01 peptide ? GO:0005737 ... P19054 38297122
    834828 8ird:k (2.3) BS02 CLA ? GO:0005737 ... P19054 38297122
    834829 8ird:k (2.3) BS03 CLA ? GO:0005737 ... P19054 38297122
    834830 8ird:o (2.3) BS01 CA ? GO:0009654 ... D0VWR2 38297122
    834831 8ird:v (2.3) BS01 HEC ? GO:0005506 ... P0A387 38297122
    834832 8ird:x (2.3) BS01 CLA ? GO:0009523 ... D0VWR4 38297122
    834833 8ird:z (2.3) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    834834 8ire:A (2.25) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    834835 8ire:A (2.25) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834836 8ire:A (2.25) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834837 8ire:A (2.25) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834838 8ire:A (2.25) BS05 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    834839 8ire:A (2.25) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834840 8ire:A (2.25) BS07 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    834841 8ire:A (2.25) BS08 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    834842 8ire:A (2.25) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    834843 8ire:B (2.25) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    834844 8ire:B (2.25) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    834845 8ire:B (2.25) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    834846 8ire:B (2.25) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    834847 8ire:B (2.25) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    834848 8ire:B (2.25) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    834849 8ire:B (2.25) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    834850 8ire:B (2.25) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    834851 8ire:B (2.25) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    834852 8ire:B (2.25) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    834853 8ire:B (2.25) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    834854 8ire:B (2.25) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    834855 8ire:B (2.25) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    834856 8ire:B (2.25) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    834857 8ire:B (2.25) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    834858 8ire:B (2.25) BS16 CLA ? GO:0009521 ... D0VWR1 38297122
    834859 8ire:C (2.25) BS01 OEX ? GO:0005737 ... D0VWR7 38297122
    834860 8ire:C (2.25) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    834861 8ire:C (2.25) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    834862 8ire:C (2.25) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    834863 8ire:C (2.25) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    834864 8ire:C (2.25) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    834865 8ire:C (2.25) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    834866 8ire:C (2.25) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    834867 8ire:C (2.25) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    834868 8ire:C (2.25) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    834869 8ire:C (2.25) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    834870 8ire:C (2.25) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    834871 8ire:C (2.25) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    834872 8ire:C (2.25) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    834873 8ire:C (2.25) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    834874 8ire:D (2.25) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834875 8ire:D (2.25) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834876 8ire:D (2.25) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834877 8ire:D (2.25) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834878 8ire:D (2.25) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834879 8ire:D (2.25) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834880 8ire:D (2.25) BS07 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834881 8ire:D (2.25) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834882 8ire:D (2.25) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834883 8ire:E (2.25) BS01 HEM ? GO:0005506 ... P12238 38297122
    834884 8ire:F (2.25) BS01 HEM ? GO:0005506 ... P12239 38297122
    834885 8ire:H (2.25) BS01 CLA ? GO:0009523 ... P19052 38297122
    834886 8ire:H (2.25) BS02 CLA ? GO:0009523 ... P19052 38297122
    834887 8ire:H (2.25) BS03 CLA ? GO:0009523 ... P19052 38297122
    834888 8ire:H (2.25) BS04 CLA ? GO:0009523 ... P19052 38297122
    834889 8ire:I (2.25) BS01 CLA ? GO:0005737 ... P12240 38297122
    834890 8ire:J (2.25) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    834891 8ire:K (2.25) BS01 peptide ? GO:0005737 ... P19054 38297122
    834892 8ire:K (2.25) BS02 CLA ? GO:0005737 ... P19054 38297122
    834893 8ire:K (2.25) BS03 CLA ? GO:0005737 ... P19054 38297122
    834894 8ire:O (2.25) BS01 CA ? GO:0009654 ... D0VWR2 38297122
    834895 8ire:V (2.25) BS01 HEC ? GO:0005506 ... P0A387 38297122
    834896 8ire:Z (2.25) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    834897 8ire:a (2.25) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    834898 8ire:a (2.25) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834899 8ire:a (2.25) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834900 8ire:a (2.25) BS04 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    834901 8ire:a (2.25) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834902 8ire:a (2.25) BS06 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    834903 8ire:a (2.25) BS07 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    834904 8ire:a (2.25) BS08 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    834905 8ire:a (2.25) BS09 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834906 8ire:b (2.25) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    834907 8ire:b (2.25) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    834908 8ire:b (2.25) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    834909 8ire:b (2.25) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    834910 8ire:b (2.25) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    834911 8ire:b (2.25) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    834912 8ire:b (2.25) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    834913 8ire:b (2.25) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    834914 8ire:b (2.25) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    834915 8ire:b (2.25) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    834916 8ire:b (2.25) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    834917 8ire:b (2.25) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    834918 8ire:b (2.25) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    834919 8ire:b (2.25) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    834920 8ire:b (2.25) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    834921 8ire:c (2.25) BS01 OEX ? GO:0005737 ... D0VWR7 38297122
    834922 8ire:c (2.25) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    834923 8ire:c (2.25) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    834924 8ire:c (2.25) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    834925 8ire:c (2.25) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    834926 8ire:c (2.25) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    834927 8ire:c (2.25) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    834928 8ire:c (2.25) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    834929 8ire:c (2.25) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    834930 8ire:c (2.25) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    834931 8ire:c (2.25) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    834932 8ire:c (2.25) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    834933 8ire:c (2.25) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    834934 8ire:c (2.25) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    834935 8ire:c (2.25) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    834936 8ire:c (2.25) BS16 CA ? GO:0005737 ... D0VWR7 38297122
    834937 8ire:d (2.25) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834938 8ire:d (2.25) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834939 8ire:d (2.25) BS03 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834940 8ire:d (2.25) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834941 8ire:d (2.25) BS05 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834942 8ire:d (2.25) BS06 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834943 8ire:d (2.25) BS07 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834944 8ire:d (2.25) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834945 8ire:d (2.25) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    834946 8ire:e (2.25) BS01 HEM ? GO:0005506 ... P12238 38297122
    834947 8ire:f (2.25) BS01 HEM ? GO:0005506 ... P12239 38297122
    834948 8ire:h (2.25) BS01 CLA ? GO:0009523 ... P19052 38297122
    834949 8ire:h (2.25) BS02 CLA ? GO:0009523 ... P19052 38297122
    834950 8ire:h (2.25) BS03 CLA ? GO:0009523 ... P19052 38297122
    834951 8ire:i (2.25) BS01 CLA ? GO:0005737 ... P12240 38297122
    834952 8ire:j (2.25) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    834953 8ire:k (2.25) BS01 peptide ? GO:0005737 ... P19054 38297122
    834954 8ire:k (2.25) BS02 CLA ? GO:0005737 ... P19054 38297122
    834955 8ire:k (2.25) BS03 CLA ? GO:0005737 ... P19054 38297122
    834956 8ire:o (2.25) BS01 CA ? GO:0009654 ... D0VWR2 38297122
    834957 8ire:v (2.25) BS01 HEC ? GO:0005506 ... P0A387 38297122
    834958 8ire:x (2.25) BS01 CLA ? GO:0009523 ... D0VWR4 38297122
    834959 8ire:z (2.25) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    834960 8irf:A (2.25) BS01 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    834961 8irf:A (2.25) BS02 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834962 8irf:A (2.25) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834963 8irf:A (2.25) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834964 8irf:A (2.25) BS05 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    834965 8irf:A (2.25) BS06 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    834966 8irf:A (2.25) BS07 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    834967 8irf:A (2.25) BS08 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    834968 8irf:A (2.25) BS09 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    834969 8irf:B (2.25) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    834970 8irf:B (2.25) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    834971 8irf:B (2.25) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    834972 8irf:B (2.25) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    834973 8irf:B (2.25) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    834974 8irf:B (2.25) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    834975 8irf:B (2.25) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    834976 8irf:B (2.25) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    834977 8irf:B (2.25) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    834978 8irf:B (2.25) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    834979 8irf:B (2.25) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    834980 8irf:B (2.25) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    834981 8irf:B (2.25) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    834982 8irf:B (2.25) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    834983 8irf:B (2.25) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    834984 8irf:B (2.25) BS16 CLA ? GO:0009521 ... D0VWR1 38297122
    834985 8irf:C (2.25) BS01 OEX ? GO:0005737 ... D0VWR7 38297122
    834986 8irf:C (2.25) BS02 CLA ? GO:0005737 ... D0VWR7 38297122
    834987 8irf:C (2.25) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    834988 8irf:C (2.25) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    834989 8irf:C (2.25) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    834990 8irf:C (2.25) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    834991 8irf:C (2.25) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    834992 8irf:C (2.25) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    834993 8irf:C (2.25) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    834994 8irf:C (2.25) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    834995 8irf:C (2.25) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    834996 8irf:C (2.25) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    834997 8irf:C (2.25) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    834998 8irf:C (2.25) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    834999 8irf:C (2.25) BS15 CA ? GO:0005737 ... D0VWR7 38297122
    835000 8irf:D (2.25) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).