SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    835201 8j6z:J (2.79) BS01 CLA ? GO:0003674 ... P56769 37936349
    835202 8j6z:J (2.79) BS02 CLA ? GO:0003674 ... P56769 37936349
    835203 8j6z:K (2.79) BS01 CLA ? GO:0005634 ... Q9SUI5 37936349
    835204 8j6z:K (2.79) BS02 CLA ? GO:0005634 ... Q9SUI5 37936349
    835205 8j6z:K (2.79) BS03 CLA ? GO:0005634 ... Q9SUI5 37936349
    835206 8j6z:K (2.79) BS04 CLA ? GO:0005634 ... Q9SUI5 37936349
    835207 8j6z:L (2.79) BS01 CLA ? GO:0003729 ... Q9SUI4 37936349
    835208 8j6z:L (2.79) BS02 CLA ? GO:0003729 ... Q9SUI4 37936349
    835209 8j6z:L (2.79) BS03 CLA ? GO:0003729 ... Q9SUI4 37936349
    835210 8j6z:L (2.79) BS04 CLA ? GO:0003729 ... Q9SUI4 37936349
    835211 8j6z:L (2.79) BS05 CLA ? GO:0003729 ... Q9SUI4 37936349
    835212 8j6z:L (2.79) BS06 CLA ? GO:0003729 ... Q9SUI4 37936349
    835213 8j6z:O (2.79) BS01 CLA ? GO:0003729 ... Q949Q5 37936349
    835214 8j6z:O (2.79) BS02 CLA ? GO:0003729 ... Q949Q5 37936349
    835215 8j6z:O (2.79) BS03 CLA ? GO:0003729 ... Q949Q5 37936349
    835216 8j6z:O (2.79) BS04 CHL ? GO:0003729 ... Q949Q5 37936349
    835217 8j6z:x (2.79) BS01 CHL ? GO:0003729 ... P0CJ48 37936349
    835218 8j6z:x (2.79) BS02 CHL ? GO:0003729 ... P0CJ48 37936349
    835219 8j6z:x (2.79) BS03 CLA ? GO:0003729 ... P0CJ48 37936349
    835220 8j6z:x (2.79) BS04 CHL ? GO:0003729 ... P0CJ48 37936349
    835221 8j6z:x (2.79) BS05 CLA ? GO:0003729 ... P0CJ48 37936349
    835222 8j6z:x (2.79) BS06 CLA ? GO:0003729 ... P0CJ48 37936349
    835223 8j6z:x (2.79) BS07 CHL ? GO:0003729 ... P0CJ48 37936349
    835224 8j6z:x (2.79) BS08 CLA ? GO:0003729 ... P0CJ48 37936349
    835225 8j6z:x (2.79) BS09 CHL ? GO:0003729 ... P0CJ48 37936349
    835226 8j6z:x (2.79) BS10 CLA ? GO:0003729 ... P0CJ48 37936349
    835227 8j6z:x (2.79) BS11 CLA ? GO:0003729 ... P0CJ48 37936349
    835228 8j6z:x (2.79) BS12 CLA ? GO:0003729 ... P0CJ48 37936349
    835229 8j6z:x (2.79) BS13 CLA ? GO:0003729 ... P0CJ48 37936349
    835230 8j6z:x (2.79) BS14 CHL ? GO:0003729 ... P0CJ48 37936349
    835231 8j6z:y (2.79) BS01 CLA ? GO:0003729 ... P0CJ48 37936349
    835232 8j6z:y (2.79) BS02 CLA ? GO:0003729 ... P0CJ48 37936349
    835233 8j6z:y (2.79) BS03 CHL ? GO:0003729 ... P0CJ48 37936349
    835234 8j6z:y (2.79) BS04 CLA ? GO:0003729 ... P0CJ48 37936349
    835235 8j6z:y (2.79) BS05 CHL ? GO:0003729 ... P0CJ48 37936349
    835236 8j6z:y (2.79) BS06 CHL ? GO:0003729 ... P0CJ48 37936349
    835237 8j6z:y (2.79) BS07 CLA ? GO:0003729 ... P0CJ48 37936349
    835238 8j6z:y (2.79) BS08 CLA ? GO:0003729 ... P0CJ48 37936349
    835239 8j6z:y (2.79) BS09 CLA ? GO:0003729 ... P0CJ48 37936349
    835240 8j6z:y (2.79) BS10 CHL ? GO:0003729 ... P0CJ48 37936349
    835241 8j6z:y (2.79) BS11 CLA ? GO:0003729 ... P0CJ48 37936349
    835242 8j6z:y (2.79) BS12 CHL ? GO:0003729 ... P0CJ48 37936349
    835243 8j6z:y (2.79) BS13 CHL ? GO:0003729 ... P0CJ48 37936349
    835244 8j6z:y (2.79) BS14 CLA ? GO:0003729 ... P0CJ48 37936349
    835245 8j6z:y (2.79) BS15 CHL ? GO:0003729 ... P0CJ48 37936349
    835246 8j6z:y (2.79) BS16 CHL ? GO:0003729 ... P0CJ48 37936349
    835247 8j6z:z (2.79) BS01 CHL ? GO:0005739 ... Q9SHR7 37936349
    835248 8j6z:z (2.79) BS02 CLA ? GO:0005739 ... Q9SHR7 37936349
    835249 8j6z:z (2.79) BS03 CLA ? GO:0005739 ... Q9SHR7 37936349
    835250 8j6z:z (2.79) BS04 CLA ? GO:0005739 ... Q9SHR7 37936349
    835251 8j6z:z (2.79) BS05 CLA ? GO:0005739 ... Q9SHR7 37936349
    835252 8j6z:z (2.79) BS06 CLA ? GO:0005739 ... Q9SHR7 37936349
    835253 8j6z:z (2.79) BS07 CHL ? GO:0005739 ... Q9SHR7 37936349
    835254 8j6z:z (2.79) BS08 CHL ? GO:0005739 ... Q9SHR7 37936349
    835255 8j6z:z (2.79) BS09 CHL ? GO:0005739 ... Q9SHR7 37936349
    835256 8j6z:z (2.79) BS10 CHL ? GO:0005739 ... Q9SHR7 37936349
    835257 8j6z:z (2.79) BS11 CLA ? GO:0005739 ... Q9SHR7 37936349
    835258 8j6z:z (2.79) BS12 CLA ? GO:0005739 ... Q9SHR7 37936349
    835259 8j6z:z (2.79) BS13 CHL ? GO:0005739 ... Q9SHR7 37936349
    835260 8j6z:z (2.79) BS14 CHL ? GO:0005739 ... Q9SHR7 37936349
    835261 8j70:A (1.85) BS01 dna ? GO:0003677 ... Q13342 N/A
    835262 8j70:A (1.85) BS02 dna ? GO:0003677 ... Q13342 N/A
    835263 8j70:A (1.85) BS03 SEY ? GO:0003677 ... Q13342 N/A
    835264 8j70:B (1.85) BS01 dna ? GO:0003677 ... Q13342 N/A
    835265 8j70:B (1.85) BS02 dna ? GO:0003677 ... Q13342 N/A
    835266 8j71:A (1.85) BS01 dna ? GO:0003677 ... Q13342 N/A
    835267 8j71:A (1.85) BS02 dna ? GO:0003677 ... Q13342 N/A
    835268 8j71:B (1.85) BS01 dna ? GO:0003677 ... Q13342 N/A
    835269 8j71:B (1.85) BS02 dna ? GO:0003677 ... Q13342 N/A
    835270 8j72:A (3.16) BS01 rna 2.3.2.27 N/A Q1PSW8 38036331
    835271 8j72:B (3.16) BS01 rna 2.3.2.27 N/A Q1PSW8 38036331
    835272 8j74:A (3.6) BS01 AV0 ? GO:0001701 ... Q9GZV3 38589607
    835273 8j74:A (3.6) BS02 HC6 ? GO:0001701 ... Q9GZV3 38589607
    835274 8j74:A (3.6) BS03 AV0 ? GO:0001701 ... Q9GZV3 38589607
    835275 8j74:B (3.6) BS01 AV0 ? GO:0001701 ... Q9GZV3 38589607
    835276 8j74:B (3.6) BS02 AV0 ? GO:0001701 ... Q9GZV3 38589607
    835277 8j74:B (3.6) BS03 HC6 ? GO:0001701 ... Q9GZV3 38589607
    835278 8j75:A (3.6) BS01 HC6 ? GO:0001701 ... Q9GZV3 38589607
    835279 8j77:A (3.7) BS01 CHT ? GO:0001701 ... Q9GZV3 38589607
    835280 8j78:C (3.88) BS01 BTI 6.4.1.4 GO:0004075 ... Q96RQ3 N/A
    835281 8j78:D (3.88) BS01 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 N/A
    835282 8j78:F (3.88) BS01 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 N/A
    835283 8j78:I (3.88) BS01 BTI 6.4.1.4 GO:0004075 ... Q96RQ3 N/A
    835284 8j78:J (3.88) BS01 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 N/A
    835285 8j79:A (1.99) BS01 FES 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    835286 8j79:A (1.99) BS02 FES 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    835287 8j79:A (1.99) BS03 FAD 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    835288 8j79:A (1.99) BS04 CO3 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    835289 8j79:A (1.99) BS05 CA 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    835290 8j79:A (1.99) BS06 CA 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    835291 8j79:A (1.99) BS07 141 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    835292 8j79:B (1.99) BS01 FES 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    835293 8j79:B (1.99) BS02 FES 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    835294 8j79:B (1.99) BS03 FAD 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    835295 8j79:B (1.99) BS04 CO3 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    835296 8j79:B (1.99) BS05 CA 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    835297 8j79:B (1.99) BS06 CA 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    835298 8j79:B (1.99) BS07 141 1.17.1.4
    1.17.3.2
    GO:0002197 ... P80457 N/A
    835299 8j7a:1 (3.06) BS01 CHL ? GO:0003729 ... Q01667 37936349
    835300 8j7a:1 (3.06) BS02 CLA ? GO:0003729 ... Q01667 37936349
    835301 8j7a:1 (3.06) BS03 CLA ? GO:0003729 ... Q01667 37936349
    835302 8j7a:1 (3.06) BS04 CLA ? GO:0003729 ... Q01667 37936349
    835303 8j7a:1 (3.06) BS05 CLA ? GO:0003729 ... Q01667 37936349
    835304 8j7a:1 (3.06) BS06 CLA ? GO:0003729 ... Q01667 37936349
    835305 8j7a:1 (3.06) BS07 CLA ? GO:0003729 ... Q01667 37936349
    835306 8j7a:1 (3.06) BS08 CLA ? GO:0003729 ... Q01667 37936349
    835307 8j7a:2 (3.06) BS01 CHL ? GO:0005515 ... Q9SYW8 37936349
    835308 8j7a:2 (3.06) BS02 CLA ? GO:0005515 ... Q9SYW8 37936349
    835309 8j7a:2 (3.06) BS03 CLA ? GO:0005515 ... Q9SYW8 37936349
    835310 8j7a:2 (3.06) BS04 CHL ? GO:0005515 ... Q9SYW8 37936349
    835311 8j7a:2 (3.06) BS05 CHL ? GO:0005515 ... Q9SYW8 37936349
    835312 8j7a:2 (3.06) BS06 CLA ? GO:0005515 ... Q9SYW8 37936349
    835313 8j7a:2 (3.06) BS07 CLA ? GO:0005515 ... Q9SYW8 37936349
    835314 8j7a:2 (3.06) BS08 CHL ? GO:0005515 ... Q9SYW8 37936349
    835315 8j7a:2 (3.06) BS09 CLA ? GO:0005515 ... Q9SYW8 37936349
    835316 8j7a:2 (3.06) BS10 CHL ? GO:0005515 ... Q9SYW8 37936349
    835317 8j7a:2 (3.06) BS11 CLA ? GO:0005515 ... Q9SYW8 37936349
    835318 8j7a:2 (3.06) BS12 CLA ? GO:0005515 ... Q9SYW8 37936349
    835319 8j7a:2 (3.06) BS13 CLA ? GO:0005515 ... Q9SYW8 37936349
    835320 8j7a:2 (3.06) BS14 CLA ? GO:0005515 ... Q9SYW8 37936349
    835321 8j7a:3 (3.06) BS01 CLA ? GO:0003729 ... Q9SY97 37936349
    835322 8j7a:3 (3.06) BS02 CHL ? GO:0003729 ... Q9SY97 37936349
    835323 8j7a:3 (3.06) BS03 CLA ? GO:0003729 ... Q9SY97 37936349
    835324 8j7a:3 (3.06) BS04 CLA ? GO:0003729 ... Q9SY97 37936349
    835325 8j7a:3 (3.06) BS05 CLA ? GO:0003729 ... Q9SY97 37936349
    835326 8j7a:3 (3.06) BS06 CLA ? GO:0003729 ... Q9SY97 37936349
    835327 8j7a:3 (3.06) BS07 CLA ? GO:0003729 ... Q9SY97 37936349
    835328 8j7a:3 (3.06) BS08 CLA ? GO:0003729 ... Q9SY97 37936349
    835329 8j7a:3 (3.06) BS09 CLA ? GO:0003729 ... Q9SY97 37936349
    835330 8j7a:3 (3.06) BS10 CHL ? GO:0003729 ... Q9SY97 37936349
    835331 8j7a:3 (3.06) BS11 CLA ? GO:0003729 ... Q9SY97 37936349
    835332 8j7a:3 (3.06) BS12 CLA ? GO:0003729 ... Q9SY97 37936349
    835333 8j7a:3 (3.06) BS13 CLA ? GO:0003729 ... Q9SY97 37936349
    835334 8j7a:3 (3.06) BS14 CLA ? GO:0003729 ... Q9SY97 37936349
    835335 8j7a:3 (3.06) BS15 CLA ? GO:0003729 ... Q9SY97 37936349
    835336 8j7a:4 (3.06) BS01 CLA ? GO:0003729 ... P27521 37936349
    835337 8j7a:4 (3.06) BS02 CHL ? GO:0003729 ... P27521 37936349
    835338 8j7a:4 (3.06) BS03 CLA ? GO:0003729 ... P27521 37936349
    835339 8j7a:4 (3.06) BS04 CLA ? GO:0003729 ... P27521 37936349
    835340 8j7a:4 (3.06) BS05 CHL ? GO:0003729 ... P27521 37936349
    835341 8j7a:4 (3.06) BS06 CHL ? GO:0003729 ... P27521 37936349
    835342 8j7a:4 (3.06) BS07 CLA ? GO:0003729 ... P27521 37936349
    835343 8j7a:4 (3.06) BS08 CLA ? GO:0003729 ... P27521 37936349
    835344 8j7a:4 (3.06) BS09 CLA ? GO:0003729 ... P27521 37936349
    835345 8j7a:4 (3.06) BS10 CHL ? GO:0003729 ... P27521 37936349
    835346 8j7a:4 (3.06) BS11 CLA ? GO:0003729 ... P27521 37936349
    835347 8j7a:A (3.06) BS01 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835348 8j7a:A (3.06) BS02 CL0 1.97.1.12 GO:0000287 ... P56766 37936349
    835349 8j7a:A (3.06) BS03 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835350 8j7a:A (3.06) BS04 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835351 8j7a:A (3.06) BS05 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835352 8j7a:A (3.06) BS06 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835353 8j7a:A (3.06) BS07 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835354 8j7a:A (3.06) BS08 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835355 8j7a:A (3.06) BS09 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835356 8j7a:A (3.06) BS10 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835357 8j7a:A (3.06) BS11 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835358 8j7a:A (3.06) BS12 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835359 8j7a:A (3.06) BS13 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835360 8j7a:A (3.06) BS14 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835361 8j7a:A (3.06) BS15 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835362 8j7a:A (3.06) BS16 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835363 8j7a:A (3.06) BS17 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835364 8j7a:A (3.06) BS18 SF4 1.97.1.12 GO:0000287 ... P56766 37936349
    835365 8j7a:A (3.06) BS19 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835366 8j7a:A (3.06) BS20 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835367 8j7a:A (3.06) BS21 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835368 8j7a:A (3.06) BS22 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835369 8j7a:A (3.06) BS23 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835370 8j7a:A (3.06) BS24 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835371 8j7a:A (3.06) BS25 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835372 8j7a:A (3.06) BS26 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835373 8j7a:A (3.06) BS27 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835374 8j7a:A (3.06) BS28 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835375 8j7a:A (3.06) BS29 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835376 8j7a:A (3.06) BS30 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835377 8j7a:A (3.06) BS31 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835378 8j7a:A (3.06) BS32 PQN 1.97.1.12 GO:0000287 ... P56766 37936349
    835379 8j7a:A (3.06) BS33 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835380 8j7a:A (3.06) BS34 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835381 8j7a:A (3.06) BS35 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835382 8j7a:A (3.06) BS36 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835383 8j7a:A (3.06) BS37 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835384 8j7a:A (3.06) BS38 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835385 8j7a:A (3.06) BS39 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835386 8j7a:A (3.06) BS40 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835387 8j7a:A (3.06) BS41 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835388 8j7a:A (3.06) BS42 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835389 8j7a:A (3.06) BS43 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835390 8j7a:A (3.06) BS44 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835391 8j7a:A (3.06) BS45 CLA 1.97.1.12 GO:0000287 ... P56766 37936349
    835392 8j7a:B (3.06) BS01 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    835393 8j7a:B (3.06) BS02 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    835394 8j7a:B (3.06) BS03 SF4 1.97.1.12 GO:0000287 ... P56767 37936349
    835395 8j7a:B (3.06) BS04 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    835396 8j7a:B (3.06) BS05 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    835397 8j7a:B (3.06) BS06 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    835398 8j7a:B (3.06) BS07 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    835399 8j7a:B (3.06) BS08 CLA 1.97.1.12 GO:0000287 ... P56767 37936349
    835400 8j7a:B (3.06) BS09 CLA 1.97.1.12 GO:0000287 ... P56767 37936349

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).