SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    835401 8iri:O (2.25) BS01 CA ? GO:0009654 ... D0VWR2 38297122
    835402 8iri:V (2.25) BS01 HEC ? GO:0005506 ... P0A387 38297122
    835403 8iri:X (2.25) BS01 CLA ? GO:0009523 ... D0VWR4 38297122
    835404 8iri:Z (2.25) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    835405 8iri:a (2.25) BS01 OEY 1.10.3.9 GO:0005506 ... P51765 38297122
    835406 8iri:a (2.25) BS02 FE2 1.10.3.9 GO:0005506 ... P51765 38297122
    835407 8iri:a (2.25) BS03 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    835408 8iri:a (2.25) BS04 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    835409 8iri:a (2.25) BS05 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    835410 8iri:a (2.25) BS06 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    835411 8iri:a (2.25) BS07 CLA 1.10.3.9 GO:0005506 ... P51765 38297122
    835412 8iri:a (2.25) BS08 OEX 1.10.3.9 GO:0005506 ... P51765 38297122
    835413 8iri:a (2.25) BS09 PHO 1.10.3.9 GO:0005506 ... P51765 38297122
    835414 8iri:a (2.25) BS10 BCT 1.10.3.9 GO:0005506 ... P51765 38297122
    835415 8iri:b (2.25) BS01 CLA ? GO:0009521 ... D0VWR1 38297122
    835416 8iri:b (2.25) BS02 CLA ? GO:0009521 ... D0VWR1 38297122
    835417 8iri:b (2.25) BS03 CLA ? GO:0009521 ... D0VWR1 38297122
    835418 8iri:b (2.25) BS04 CLA ? GO:0009521 ... D0VWR1 38297122
    835419 8iri:b (2.25) BS05 CLA ? GO:0009521 ... D0VWR1 38297122
    835420 8iri:b (2.25) BS06 CLA ? GO:0009521 ... D0VWR1 38297122
    835421 8iri:b (2.25) BS07 CLA ? GO:0009521 ... D0VWR1 38297122
    835422 8iri:b (2.25) BS08 CLA ? GO:0009521 ... D0VWR1 38297122
    835423 8iri:b (2.25) BS09 CLA ? GO:0009521 ... D0VWR1 38297122
    835424 8iri:b (2.25) BS10 CLA ? GO:0009521 ... D0VWR1 38297122
    835425 8iri:b (2.25) BS11 CLA ? GO:0009521 ... D0VWR1 38297122
    835426 8iri:b (2.25) BS12 CLA ? GO:0009521 ... D0VWR1 38297122
    835427 8iri:b (2.25) BS13 CLA ? GO:0009521 ... D0VWR1 38297122
    835428 8iri:b (2.25) BS14 CLA ? GO:0009521 ... D0VWR1 38297122
    835429 8iri:b (2.25) BS15 CLA ? GO:0009521 ... D0VWR1 38297122
    835430 8iri:c (2.25) BS01 OEY ? GO:0005737 ... D0VWR7 38297122
    835431 8iri:c (2.25) BS02 OEX ? GO:0005737 ... D0VWR7 38297122
    835432 8iri:c (2.25) BS03 CLA ? GO:0005737 ... D0VWR7 38297122
    835433 8iri:c (2.25) BS04 CLA ? GO:0005737 ... D0VWR7 38297122
    835434 8iri:c (2.25) BS05 CLA ? GO:0005737 ... D0VWR7 38297122
    835435 8iri:c (2.25) BS06 CLA ? GO:0005737 ... D0VWR7 38297122
    835436 8iri:c (2.25) BS07 CLA ? GO:0005737 ... D0VWR7 38297122
    835437 8iri:c (2.25) BS08 CLA ? GO:0005737 ... D0VWR7 38297122
    835438 8iri:c (2.25) BS09 CLA ? GO:0005737 ... D0VWR7 38297122
    835439 8iri:c (2.25) BS10 CLA ? GO:0005737 ... D0VWR7 38297122
    835440 8iri:c (2.25) BS11 CLA ? GO:0005737 ... D0VWR7 38297122
    835441 8iri:c (2.25) BS12 CLA ? GO:0005737 ... D0VWR7 38297122
    835442 8iri:c (2.25) BS13 CLA ? GO:0005737 ... D0VWR7 38297122
    835443 8iri:c (2.25) BS14 CLA ? GO:0005737 ... D0VWR7 38297122
    835444 8iri:c (2.25) BS15 CLA ? GO:0005737 ... D0VWR7 38297122
    835445 8iri:c (2.25) BS16 CA ? GO:0005737 ... D0VWR7 38297122
    835446 8iri:c (2.25) BS17 CA ? GO:0005737 ... D0VWR7 38297122
    835447 8iri:d (2.25) BS01 FE2 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    835448 8iri:d (2.25) BS02 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    835449 8iri:d (2.25) BS03 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    835450 8iri:d (2.25) BS04 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    835451 8iri:d (2.25) BS05 PHO 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    835452 8iri:d (2.25) BS06 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    835453 8iri:d (2.25) BS07 BCT 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    835454 8iri:d (2.25) BS08 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    835455 8iri:d (2.25) BS09 CLA 1.10.3.9 GO:0005737 ... D0VWR8 38297122
    835456 8iri:e (2.25) BS01 HEM ? GO:0005506 ... P12238 38297122
    835457 8iri:f (2.25) BS01 HEM ? GO:0005506 ... P12239 38297122
    835458 8iri:h (2.25) BS01 CLA ? GO:0009523 ... P19052 38297122
    835459 8iri:h (2.25) BS02 CLA ? GO:0009523 ... P19052 38297122
    835460 8iri:h (2.25) BS03 CLA ? GO:0009523 ... P19052 38297122
    835461 8iri:h (2.25) BS04 CLA ? GO:0009523 ... P19052 38297122
    835462 8iri:i (2.25) BS01 CLA ? GO:0005737 ... P12240 38297122
    835463 8iri:j (2.25) BS01 MG ? GO:0009523 ... Q7DGD4 38297122
    835464 8iri:k (2.25) BS01 peptide ? GO:0005737 ... P19054 38297122
    835465 8iri:k (2.25) BS02 CLA ? GO:0005737 ... P19054 38297122
    835466 8iri:k (2.25) BS03 CLA ? GO:0005737 ... P19054 38297122
    835467 8iri:o (2.25) BS01 CA ? GO:0009654 ... D0VWR2 38297122
    835468 8iri:v (2.25) BS01 HEC ? GO:0005506 ... P0A387 38297122
    835469 8iri:x (2.25) BS01 CLA ? GO:0009523 ... D0VWR4 38297122
    835470 8iri:z (2.25) BS01 peptide ? GO:0009523 ... D0VWR5 38297122
    835471 8irk:A (2.35) BS01 PLP 4.4.-.- GO:0016846 ... A0R5M7 38072054
    835472 8irk:A (2.35) BS02 PYR 4.4.-.- GO:0016846 ... A0R5M7 38072054
    835473 8irk:B (2.35) BS01 PLP 4.4.-.- GO:0016846 ... A0R5M7 38072054
    835474 8irk:C (2.35) BS01 PLP 4.4.-.- GO:0016846 ... A0R5M7 38072054
    835475 8irk:D (2.35) BS01 PLP 4.4.-.- GO:0016846 ... A0R5M7 38072054
    835476 8irm:A (2.6) BS01 ADE ? GO:0005345 ... Q9SRK7 38172575
    835477 8irm:B (2.6) BS01 ADE ? GO:0005345 ... Q9SRK7 38172575
    835478 8irn:A (2.7) BS01 EMU ? GO:0005345 ... Q9SRK7 38172575
    835479 8irn:B (2.7) BS01 EMU ? GO:0005345 ... Q9SRK7 38172575
    835480 8iro:A (2.7) BS01 ZEA ? GO:0005345 ... Q9SRK7 38172575
    835481 8iro:B (2.7) BS01 ZEA ? GO:0005345 ... Q9SRK7 38172575
    835482 8irp:A (2.8) BS01 H35 ? GO:0005345 ... Q9SRK7 38172575
    835483 8irp:B (2.8) BS01 H35 ? GO:0005345 ... Q9SRK7 38172575
    835484 8irr:R (3.2) BS01 R5F ? GO:0001588 ... P21728 37221270
    835485 8irr:R (3.2) BS02 CLR ? GO:0001588 ... P21728 37221270
    835486 8irr:R (3.2) BS03 CLR ? GO:0001588 ... P21728 37221270
    835487 8irs:R (3.0) BS01 R5F ? GO:0000139 ... P0ABE7
    P14416
    37221270
    835488 8irt:R (2.7) BS01 R5F ? GO:0001591 ... P0ABE7
    P35462
    37221270
    835489 8iru:R (3.2) BS01 R5F N/A GO:0004930 ... N/A 37221270
    835490 8iru:R (3.2) BS02 CLR N/A GO:0004930 ... N/A 37221270
    835491 8iru:R (3.2) BS03 CLR N/A GO:0004930 ... N/A 37221270
    835492 8iru:R (3.2) BS04 CLR N/A GO:0004930 ... N/A 37221270
    835493 8iru:R (3.2) BS05 CLR N/A GO:0004930 ... N/A 37221270
    835494 8irv:R (3.1) BS01 R5F ? GO:0001588 ... P0ABE7
    P21918
    37221270
    835495 8irv:R (3.1) BS02 CLR ? GO:0001588 ... P0ABE7
    P21918
    37221270
    835496 8irv:R (3.1) BS03 CLR ? GO:0001588 ... P0ABE7
    P21918
    37221270
    835497 8irv:R (3.1) BS04 CLR ? GO:0001588 ... P0ABE7
    P21918
    37221270
    835498 8irv:R (3.1) BS05 CLR ? GO:0001588 ... P0ABE7
    P21918
    37221270
    835499 8irv:R (3.1) BS06 CLR ? GO:0001588 ... P0ABE7
    P21918
    37221270
    835500 8irv:R (3.1) BS07 CLR ? GO:0001588 ... P0ABE7
    P21918
    37221270
    835501 8irv:R (3.1) BS08 CLR ? GO:0001588 ... P0ABE7
    P21918
    37221270
    835502 8iry:A (2.35) BS01 PLP 4.4.-.- GO:0016846 ... A0R5M7 38072054
    835503 8iry:A (2.35) BS02 PYR 4.4.-.- GO:0016846 ... A0R5M7 38072054
    835504 8iry:B (2.35) BS01 PLP 4.4.-.- GO:0016846 ... A0R5M7 38072054
    835505 8iry:C (2.35) BS01 PLP 4.4.-.- GO:0016846 ... A0R5M7 38072054
    835506 8iry:D (2.35) BS01 PLP 4.4.-.- GO:0016846 ... A0R5M7 38072054
    835507 8irz:A (2.86) BS01 PLP 4.4.-.- GO:0016846 ... A0R5M7 38072054
    835508 8irz:B (2.86) BS01 PLP 4.4.-.- GO:0016846 ... A0R5M7 38072054
    835509 8is0:A (3.02) BS01 PLP 4.4.-.- GO:0016846 ... A0R5M7 38072054
    835510 8is0:A (3.02) BS02 DHA 4.4.-.- GO:0016846 ... A0R5M7 38072054
    835511 8is0:B (3.02) BS01 PLP 4.4.-.- GO:0016846 ... A0R5M7 38072054
    835512 8is0:B (3.02) BS02 DHA 4.4.-.- GO:0016846 ... A0R5M7 38072054
    835513 8is4:A (1.9) BS01 URF N/A GO:0016787 ... N/A 37680460
    835514 8is4:A (1.9) BS02 ZN N/A GO:0016787 ... N/A 37680460
    835515 8is4:B (1.9) BS01 URF N/A GO:0016787 ... N/A 37680460
    835516 8is4:B (1.9) BS02 ZN N/A GO:0016787 ... N/A 37680460
    835517 8is5:A (2.1) BS01 ZN N/A GO:0016787 ... N/A 37680460
    835518 8is5:B (2.1) BS01 ZN N/A GO:0016787 ... N/A 37680460
    835519 8is7:A (1.6) BS01 FPS N/A GO:0004311 ... B9UXM0 N/A
    835520 8is7:A (1.6) BS02 FPS N/A GO:0004311 ... B9UXM0 N/A
    835521 8is7:A (1.6) BS03 MG N/A GO:0004311 ... B9UXM0 N/A
    835522 8is7:A (1.6) BS04 MG N/A GO:0004311 ... B9UXM0 N/A
    835523 8is7:A (1.6) BS05 MG N/A GO:0004311 ... B9UXM0 N/A
    835524 8is8:A (2.3) BS01 GST N/A GO:0004311 ... B9UXM0 N/A
    835525 8is8:A (2.3) BS02 GST N/A GO:0004311 ... B9UXM0 N/A
    835526 8is8:A (2.3) BS03 MG N/A GO:0004311 ... B9UXM0 N/A
    835527 8is8:A (2.3) BS04 MG N/A GO:0004311 ... B9UXM0 N/A
    835528 8is8:A (2.3) BS05 MG N/A GO:0004311 ... B9UXM0 N/A
    835529 8is9:A (1.59) BS01 FPS N/A GO:0004311 ... B9UXM0 N/A
    835530 8is9:A (1.59) BS02 MG N/A GO:0004311 ... B9UXM0 N/A
    835531 8is9:A (1.59) BS03 MG N/A GO:0004311 ... B9UXM0 N/A
    835532 8is9:A (1.59) BS04 MG N/A GO:0004311 ... B9UXM0 N/A
    835533 8isa:A (1.59) BS01 GST N/A GO:0004311 ... B9UXM0 N/A
    835534 8isj:A (3.0) BS01 O6E ? GO:0000155 ... P14712 37491602
    835535 8isj:B (3.0) BS01 O6E ? GO:0000155 ... P14712 37491602
    835536 8isk:A (3.3) BS01 O6E ? GO:0000155 ... Q6XFQ4 37491602
    835537 8isk:B (3.3) BS01 O6E ? GO:0000155 ... Q6XFQ4 37491602
    835538 8ism:A (2.76) BS01 ZJZ ? GO:0003677 ... P02768 37071741
    835539 8isn:A (2.48) BS01 peptide ? N/A D9UAY1 37661929
    835540 8isn:D (2.48) BS01 peptide ? N/A D9UAY1 37661929
    835541 8isp:A (2.11) BS01 Q53 3.5.2.6 GO:0008800 ... A0ACD6B8U6 38588869
    835542 8isq:A (2.24) BS01 ZZ7 3.5.2.6 GO:0008800 ... A0ACD6B8U6 38588869
    835543 8isr:A (2.09) BS01 Q6R 3.5.2.6 GO:0008800 ... A0ACD6B8U6 38588869
    835544 8isr:B (2.09) BS01 Q6R 3.5.2.6 GO:0008800 ... A0ACD6B8U6 38588869
    835545 8iss:B (3.19) BS01 rna 4.6.1.16 GO:0000213 ... Q8NCE0 37770519
    835546 8iss:C (3.19) BS01 rna 4.6.1.16 GO:0000213 ... Q9BSV6 37770519
    835547 8iss:D (3.19) BS01 rna ? GO:0000214 ... Q7Z6J9 37770519
    835548 8isz:A (3.27) BS01 dna ? GO:0003676 ... A0A1I7NFD7 37783228
    835549 8isz:A (3.27) BS02 rna ? GO:0003676 ... A0A1I7NFD7 37783228
    835550 8isz:B (3.27) BS01 dna ? GO:0007165 ... A0A1I7NFG5 37783228
    835551 8isz:B (3.27) BS02 rna ? GO:0007165 ... A0A1I7NFG5 37783228
    835552 8it0:A (3.5) BS01 rna ? GO:0003676 ... A0A1I7NFD7 37783228
    835553 8it0:B (3.5) BS01 dna ? GO:0007165 ... A0A1I7NFG5 37783228
    835554 8it0:B (3.5) BS02 rna ? GO:0007165 ... A0A1I7NFG5 37783228
    835555 8it0:E (3.5) BS01 dna ? GO:0003676 ... A0A1I7NFD7 37783228
    835556 8it0:E (3.5) BS02 rna ? GO:0003676 ... A0A1I7NFD7 37783228
    835557 8it0:F (3.5) BS01 dna ? GO:0007165 ... A0A1I7NFG5 37783228
    835558 8it0:F (3.5) BS02 rna ? GO:0007165 ... A0A1I7NFG5 37783228
    835559 8it1:A (3.41) BS01 dna ? GO:0003676 ... A0A1I7NFD7 37783228
    835560 8it1:A (3.41) BS02 rna ? GO:0003676 ... A0A1I7NFD7 37783228
    835561 8it1:B (3.41) BS01 dna ? GO:0007165 ... A0A1I7NFG5 37783228
    835562 8it1:B (3.41) BS02 rna ? GO:0007165 ... A0A1I7NFG5 37783228
    835563 8it1:E (3.41) BS01 dna ? GO:0003676 ... A0A1I7NFD7 37783228
    835564 8it1:E (3.41) BS02 rna ? GO:0003676 ... A0A1I7NFD7 37783228
    835565 8it1:F (3.41) BS01 dna ? GO:0007165 ... A0A1I7NFG5 37783228
    835566 8it1:F (3.41) BS02 rna ? GO:0007165 ... A0A1I7NFG5 37783228
    835567 8it1:I (3.41) BS01 dna ? GO:0003676 ... A0A1I7NFD7 37783228
    835568 8it1:I (3.41) BS02 rna ? GO:0003676 ... A0A1I7NFD7 37783228
    835569 8it1:J (3.41) BS01 dna ? GO:0007165 ... A0A1I7NFG5 37783228
    835570 8it1:J (3.41) BS02 rna ? GO:0007165 ... A0A1I7NFG5 37783228
    835571 8it1:M (3.41) BS01 dna ? GO:0003676 ... A0A1I7NFD7 37783228
    835572 8it1:M (3.41) BS02 rna ? GO:0003676 ... A0A1I7NFD7 37783228
    835573 8it1:N (3.41) BS01 dna ? GO:0007165 ... A0A1I7NFG5 37783228
    835574 8it1:N (3.41) BS02 rna ? GO:0007165 ... A0A1I7NFG5 37783228
    835575 8it4:A (2.4) BS01 SKU 5.4.2.11
    5.4.2.4
    GO:0003824 ... P18669 N/A
    835576 8it4:B (2.4) BS01 SKU 5.4.2.11
    5.4.2.4
    GO:0003824 ... P18669 N/A
    835577 8it5:C (2.2) BS01 QAI 5.4.2.11
    5.4.2.4
    GO:0003824 ... P18669 N/A
    835578 8it6:C (2.55) BS01 Q90 5.4.2.11
    5.4.2.4
    GO:0003824 ... P18669 N/A
    835579 8it7:C (2.8) BS01 Q9F 5.4.2.11
    5.4.2.4
    GO:0003824 ... P18669 N/A
    835580 8it8:C (1.95) BS01 Q9L 5.4.2.11
    5.4.2.4
    GO:0003824 ... P18669 N/A
    835581 8it9:A (2.14) BS01 ZL6 1.14.11.-
    1.14.11.53
    GO:0001659 ... Q9C0B1 37418628
    835582 8it9:A (2.14) BS02 AKG 1.14.11.-
    1.14.11.53
    GO:0001659 ... Q9C0B1 37418628
    835583 8ita:A (2.5) BS01 R0U N/A GO:0008194 ... A0AA96QCN7 37581303
    835584 8ita:A (2.5) BS02 UDP N/A GO:0008194 ... A0AA96QCN7 37581303
    835585 8itb:C (2.38) BS01 Q9R 5.4.2.11
    5.4.2.4
    GO:0003824 ... P18669 N/A
    835586 8itb:C (2.38) BS02 Q9R 5.4.2.11
    5.4.2.4
    GO:0003824 ... P18669 N/A
    835587 8itc:C (1.88) BS01 QA0 5.4.2.11
    5.4.2.4
    GO:0003824 ... P18669 N/A
    835588 8itc:C (1.88) BS02 QA0 5.4.2.11
    5.4.2.4
    GO:0003824 ... P18669 N/A
    835589 8itd:C (1.9) BS01 QA3 5.4.2.11
    5.4.2.4
    GO:0003824 ... P18669 N/A
    835590 8itf:R (3.46) BS01 8IA ? GO:0001594 ... Q5QD04 37225986
    835591 8itg:A (2.25) BS01 peptide ? N/A N/A 37550286
    835592 8itg:A (2.25) BS02 CA ? N/A N/A 37550286
    835593 8ith:A (2.55) BS01 CA ? N/A N/A 37550286
    835594 8itn:A (2.6) BS01 ZN 3.4.19.12 GO:0004843 ... Q22240 37740002
    835595 8itn:C (2.6) BS01 ZN 3.4.19.12 GO:0004843 ... Q22240 37740002
    835596 8ito:A (2.1) BS01 FE ? GO:0005506 ... Q726L3 N/A
    835597 8ito:B (2.1) BS01 FE ? GO:0005506 ... Q726L3 N/A
    835598 8itp:B (3.0) BS01 ZN 3.4.19.12 GO:0004843 ... Q22240 37740002
    835599 8itp:D (3.0) BS01 ZN 3.4.19.12 GO:0004843 ... Q22240 37740002
    835600 8itr:A (2.44) BS01 LPC ? GO:0003677 ... P02768 37731243

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).