SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    836001 8j9j:A9 (3.03) BS01 NDP N/A N/A N/A 38388527
    836002 8j9j:AB (3.03) BS01 ZMP N/A GO:0006633 ... N/A 38388527
    836003 8j9j:AC (3.03) BS01 ZMP N/A GO:0006633 ... N/A 38388527
    836004 8j9j:B5 (3.03) BS01 U10 N/A N/A N/A 38388527
    836005 8j9j:B7 (3.03) BS01 peptide N/A GO:0005739 ... N/A 38388527
    836006 8j9j:B9 (3.03) BS01 ZMP N/A N/A N/A 38388527
    836007 8j9j:E6 (3.03) BS01 peptide N/A N/A N/A 38388527
    836008 8j9j:E7 (3.03) BS01 ZN N/A N/A N/A 38388527
    836009 8j9j:N4 (3.03) BS01 U10 7.1.1.2 GO:0003954 ... A0A0S2YRV6 38388527
    836010 8j9j:S2 (3.03) BS01 SF4 N/A GO:0016651 ... N/A 38388527
    836011 8j9j:S6 (3.03) BS01 ZN N/A N/A N/A 38388527
    836012 8j9j:S7 (3.03) BS01 SF4 N/A GO:0008137 ... N/A 38388527
    836013 8j9j:S8 (3.03) BS01 SF4 N/A GO:0016020 ... N/A 38388527
    836014 8j9j:S8 (3.03) BS02 SF4 N/A GO:0016020 ... N/A 38388527
    836015 8j9j:V1 (3.03) BS01 FMN N/A GO:0010181 ... N/A 38388527
    836016 8j9j:V1 (3.03) BS02 SF4 N/A GO:0010181 ... N/A 38388527
    836017 8j9j:V1 (3.03) BS03 NAI N/A GO:0010181 ... N/A 38388527
    836018 8j9j:V2 (3.03) BS01 FES N/A GO:0016491 ... N/A 38388527
    836019 8j9l:A (2.5) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836020 8j9l:B (2.5) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836021 8j9l:C (2.5) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836022 8j9l:D (2.5) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836023 8j9l:E (2.5) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836024 8j9l:F (2.5) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836025 8j9l:G (2.5) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836026 8j9l:H (2.5) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836027 8j9l:I (2.5) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836028 8j9l:J (2.5) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836029 8j9l:K (2.5) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836030 8j9l:L (2.5) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836031 8j9m:A (2.9) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836032 8j9m:A (2.9) BS02 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836033 8j9m:B (2.9) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836034 8j9m:B (2.9) BS02 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836035 8j9m:C (2.9) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836036 8j9m:C (2.9) BS02 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836037 8j9p:A (3.4) BS01 rna ? GO:0003676 ... A0A1I7NFD7 37932527
    836038 8j9p:A (3.4) BS02 dna ? GO:0003676 ... A0A1I7NFD7 37932527
    836039 8j9p:B (3.4) BS01 rna ? GO:0007165 ... A0A1I7NFG5 37932527
    836040 8j9p:B (3.4) BS02 dna ? GO:0007165 ... A0A1I7NFG5 37932527
    836041 8j9p:C (3.4) BS01 rna ? GO:0003676 ... A0A1I7NFD7 37932527
    836042 8j9p:C (3.4) BS02 dna ? GO:0003676 ... A0A1I7NFD7 37932527
    836043 8j9p:D (3.4) BS01 rna ? GO:0007165 ... A0A1I7NFG5 37932527
    836044 8j9p:D (3.4) BS02 dna ? GO:0007165 ... A0A1I7NFG5 37932527
    836045 8j9q:A (2.18) BS01 ZN 2.3.2.27 GO:0008270 ... Q5T4S7 38030679
    836046 8j9q:A (2.18) BS02 ZN 2.3.2.27 GO:0008270 ... Q5T4S7 38030679
    836047 8j9q:A (2.18) BS03 ZN 2.3.2.27 GO:0008270 ... Q5T4S7 38030679
    836048 8j9q:B (2.18) BS01 ZN 2.3.2.27 GO:0008270 ... Q5T4S7 38030679
    836049 8j9q:B (2.18) BS02 ZN 2.3.2.27 GO:0008270 ... Q5T4S7 38030679
    836050 8j9q:B (2.18) BS03 ZN 2.3.2.27 GO:0008270 ... Q5T4S7 38030679
    836051 8j9q:C (2.18) BS01 ZN 2.3.2.27 GO:0008270 ... Q5T4S7 38030679
    836052 8j9q:C (2.18) BS02 ZN 2.3.2.27 GO:0008270 ... Q5T4S7 38030679
    836053 8j9q:C (2.18) BS03 ZN 2.3.2.27 GO:0008270 ... Q5T4S7 38030679
    836054 8j9r:A (1.65) BS01 ZN 2.3.2.27 GO:0008270 ... Q5T4S7 38030679
    836055 8j9r:A (1.65) BS02 ZN 2.3.2.27 GO:0008270 ... Q5T4S7 38030679
    836056 8j9r:A (1.65) BS03 ZN 2.3.2.27 GO:0008270 ... Q5T4S7 38030679
    836057 8j9v:A (2.71) BS01 dna 5.6.2.2 GO:0000819 ... Q00942 38418525
    836058 8j9v:A (2.71) BS02 dna 5.6.2.2 GO:0000819 ... Q00942 38418525
    836059 8j9v:A (2.71) BS03 dna 5.6.2.2 GO:0000819 ... Q00942 38418525
    836060 8j9v:A (2.71) BS04 MG 5.6.2.2 GO:0000819 ... Q00942 38418525
    836061 8j9v:A (2.71) BS05 EVP 5.6.2.2 GO:0000819 ... Q00942 38418525
    836062 8j9v:B (2.71) BS01 dna 5.6.2.2 GO:0000819 ... Q00942 38418525
    836063 8j9v:B (2.71) BS02 dna 5.6.2.2 GO:0000819 ... Q00942 38418525
    836064 8j9v:B (2.71) BS03 dna 5.6.2.2 GO:0000819 ... Q00942 38418525
    836065 8j9v:B (2.71) BS04 EVP 5.6.2.2 GO:0000819 ... Q00942 38418525
    836066 8j9w:A (2.76) BS01 dna 5.6.2.2 GO:0000819 ... Q00942 38418525
    836067 8j9w:A (2.76) BS02 dna 5.6.2.2 GO:0000819 ... Q00942 38418525
    836068 8j9w:A (2.76) BS03 dna 5.6.2.2 GO:0000819 ... Q00942 38418525
    836069 8j9w:A (2.76) BS04 EVP 5.6.2.2 GO:0000819 ... Q00942 38418525
    836070 8j9w:B (2.76) BS01 dna 5.6.2.2 GO:0000819 ... Q00942 38418525
    836071 8j9w:B (2.76) BS02 dna 5.6.2.2 GO:0000819 ... Q00942 38418525
    836072 8j9w:B (2.76) BS03 dna 5.6.2.2 GO:0000819 ... Q00942 38418525
    836073 8j9w:B (2.76) BS04 EVP 5.6.2.2 GO:0000819 ... Q00942 38418525
    836074 8j9x:A (3.0) BS01 dna 5.6.2.2 GO:0000819 ... Q00942 38418525
    836075 8j9x:A (3.0) BS02 dna 5.6.2.2 GO:0000819 ... Q00942 38418525
    836076 8j9x:A (3.0) BS03 ASW 5.6.2.2 GO:0000819 ... Q00942 38418525
    836077 8j9x:B (3.0) BS01 dna 5.6.2.2 GO:0000819 ... Q00942 38418525
    836078 8j9x:B (3.0) BS02 dna 5.6.2.2 GO:0000819 ... Q00942 38418525
    836079 8j9x:B (3.0) BS03 MG 5.6.2.2 GO:0000819 ... Q00942 38418525
    836080 8ja0:A (3.52) BS01 rna 3.1.-.- GO:0003676 ... C9X1G5 N/A
    836081 8ja0:D (3.52) BS01 rna ? N/A A0A377JKY9 N/A
    836082 8ja1:A (1.14) BS01 ANP 5.6.2.2 N/A Q00942 38418525
    836083 8ja2:A (1.73) BS01 ANP 5.6.2.2 N/A Q00942 38418525
    836084 8ja3:A (3.94) BS01 peptide ? GO:0007165 ... P29066 38175886
    836085 8ja3:B (3.94) BS01 peptide ? GO:0007165 ... P29066 38175886
    836086 8ja4:A (2.04) BS01 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    836087 8ja4:A (2.04) BS02 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    836088 8ja4:A (2.04) BS03 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    836089 8ja4:A (2.04) BS04 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    836090 8ja4:A (2.04) BS05 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    836091 8ja4:A (2.04) BS06 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    836092 8ja5:A (2.79) BS01 FUC ? GO:0019031 ... Q9IH62 N/A
    836093 8ja5:C (2.79) BS01 MAN N/A N/A N/A N/A
    836094 8ja6:A (2.0) BS01 BEM 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    836095 8ja6:A (2.0) BS02 BEM 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    836096 8ja6:A (2.0) BS03 BEM 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    836097 8ja6:A (2.0) BS04 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    836098 8ja6:A (2.0) BS05 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    836099 8ja6:A (2.0) BS06 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    836100 8ja6:A (2.0) BS07 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    836101 8ja6:A (2.0) BS08 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    836102 8ja6:A (2.0) BS09 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    836103 8ja7:E (3.02) BS01 GLC ? N/A P9WGU9 37603751
    836104 8ja7:E (3.02) BS02 GLC ? N/A P9WGU9 37603751
    836105 8ja8:A (1.6) BS01 GLC ? N/A P9WGU9 37603751
    836106 8ja8:A (1.6) BS02 GLC ? N/A P9WGU9 37603751
    836107 8ja9:A (2.1) BS01 TY6 ? N/A P9WGU9 37603751
    836108 8ja9:A (2.1) BS02 GLC ? N/A P9WGU9 37603751
    836109 8jaa:A (1.7) BS01 TY6 ? N/A P9WGU9 37603751
    836110 8jaa:A (1.7) BS02 TY6 ? N/A P9WGU9 37603751
    836111 8jab:A (1.7) BS01 U0X ? N/A P9WGU9 37603751
    836112 8jac:A (2.1) BS01 W4Z ? N/A P9WGU9 37603751
    836113 8jac:A (2.1) BS02 GLC ? N/A P9WGU9 37603751
    836114 8jad:A (2.3) BS01 YYD ? N/A P9WGU9 37603751
    836115 8jad:A (2.3) BS02 GLC ? N/A P9WGU9 37603751
    836116 8jaf:A (3.1) BS01 peptide ? GO:0007165 ... P17870 38175886
    836117 8jai:A (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836118 8jai:B (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836119 8jai:B (2.56) BS02 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836120 8jai:D (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836121 8jai:E (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836122 8jai:E (2.56) BS02 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836123 8jai:F (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836124 8jai:G (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836125 8jai:H (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836126 8jai:I (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836127 8jai:L (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836128 8jai:M (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836129 8jai:P (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836130 8jai:P (2.56) BS02 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836131 8jai:Q (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836132 8jai:S (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836133 8jai:S (2.56) BS02 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836134 8jai:W (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    836135 8jal:A (3.3) BS01 peptide ? GO:0003777 ... Q92624 37844242
    836136 8jal:B (3.3) BS01 peptide ? GO:0003777 ... Q92624 37844242
    836137 8jal:B (3.3) BS02 ZN ? GO:0003777 ... Q92624 37844242
    836138 8jao:A (2.194) BS01 ZN 3.5.2.6 GO:0008270 ... Q79MP6 37791640
    836139 8jao:A (2.194) BS02 ZN 3.5.2.6 GO:0008270 ... Q79MP6 37791640
    836140 8jao:A (2.194) BS03 5ZX 3.5.2.6 GO:0008270 ... Q79MP6 37791640
    836141 8jao:B (2.194) BS01 ZN 3.5.2.6 GO:0008270 ... Q79MP6 37791640
    836142 8jao:B (2.194) BS02 ZN 3.5.2.6 GO:0008270 ... Q79MP6 37791640
    836143 8jao:B (2.194) BS03 5ZX 3.5.2.6 GO:0008270 ... Q79MP6 37791640
    836144 8jaq:A (3.26) BS01 peptide ? GO:0003777 ... Q92624 37844242
    836145 8jaq:A (3.26) BS02 ZN ? GO:0003777 ... Q92624 37844242
    836146 8jaq:B (3.26) BS01 peptide ? GO:0003777 ... Q92624 37844242
    836147 8jaq:B (3.26) BS02 ZN ? GO:0003777 ... Q92624 37844242
    836148 8jaq:J (3.26) BS01 peptide ? GO:0003777 ... Q92624 37844242
    836149 8jaq:J (3.26) BS02 ZN ? GO:0003777 ... Q92624 37844242
    836150 8jaq:K (3.26) BS01 peptide ? GO:0003777 ... Q92624 37844242
    836151 8jaq:K (3.26) BS02 ZN ? GO:0003777 ... Q92624 37844242
    836152 8jaq:R (3.26) BS01 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37844242
    836153 8jaq:R (3.26) BS02 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37844242
    836154 8jaq:R (3.26) BS03 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37844242
    836155 8jaq:V (3.26) BS01 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37844242
    836156 8jaq:V (3.26) BS02 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37844242
    836157 8jaq:V (3.26) BS03 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37844242
    836158 8jar:A (3.3) BS01 peptide ? GO:0003777 ... Q92624 37844242
    836159 8jar:B (3.3) BS01 peptide ? GO:0003777 ... Q92624 37844242
    836160 8jar:B (3.3) BS02 ZN ? GO:0003777 ... Q92624 37844242
    836161 8jas:A (3.54) BS01 peptide ? GO:0003777 ... Q92624 37844242
    836162 8jas:B (3.54) BS01 peptide ? GO:0003777 ... Q92624 37844242
    836163 8jas:B (3.54) BS02 ZN ? GO:0003777 ... Q92624 37844242
    836164 8jas:J (3.54) BS01 ZN ? GO:0003777 ... Q92624 37844242
    836165 8jas:K (3.54) BS01 peptide ? GO:0003777 ... Q92624 37844242
    836166 8jas:K (3.54) BS02 ZN ? GO:0003777 ... Q92624 37844242
    836167 8jas:R (3.54) BS01 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37844242
    836168 8jas:R (3.54) BS02 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37844242
    836169 8jas:R (3.54) BS03 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37844242
    836170 8jas:V (3.54) BS01 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37844242
    836171 8jas:V (3.54) BS02 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37844242
    836172 8jas:V (3.54) BS03 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37844242
    836173 8jat:A (3.2) BS01 NDP 1.1.1.102 GO:0006666 ... P0CR36 37285720
    836174 8jau:A (3.22) BS01 peptide ? GO:0003777 ... Q92624 37844242
    836175 8jau:B (3.22) BS01 peptide ? GO:0003777 ... Q92624 37844242
    836176 8jau:B (3.22) BS02 ZN ? GO:0003777 ... Q92624 37844242
    836177 8jav:A (3.44) BS01 peptide ? GO:0003777 ... Q92624 37844242
    836178 8jav:A (3.44) BS02 ZN ? GO:0003777 ... Q92624 37844242
    836179 8jav:B (3.44) BS01 peptide ? GO:0003777 ... Q92624 37844242
    836180 8jav:J (3.44) BS01 peptide ? GO:0003777 ... Q92624 37844242
    836181 8jav:K (3.44) BS01 peptide ? GO:0003777 ... Q92624 37844242
    836182 8jav:R (3.44) BS01 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37844242
    836183 8jav:R (3.44) BS02 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37844242
    836184 8jav:R (3.44) BS03 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37844242
    836185 8jav:V (3.44) BS01 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37844242
    836186 8jav:V (3.44) BS02 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37844242
    836187 8jav:V (3.44) BS03 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37844242
    836188 8jaw:A (2.51) BS01 BTI 6.4.1.4 GO:0004075 ... Q96RQ3 39223421
    836189 8jaw:B (2.51) BS01 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    836190 8jaw:C (2.51) BS01 BTI 6.4.1.4 GO:0004075 ... Q96RQ3 39223421
    836191 8jaw:D (2.51) BS01 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    836192 8jaw:E (2.51) BS01 BTI 6.4.1.4 GO:0004075 ... Q96RQ3 39223421
    836193 8jaw:F (2.51) BS01 BTI 6.4.1.4 GO:0004075 ... Q96RQ3 39223421
    836194 8jaw:G (2.51) BS01 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    836195 8jaw:H (2.51) BS01 BTI 6.4.1.4 GO:0004075 ... Q96RQ3 39223421
    836196 8jaw:I (2.51) BS01 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    836197 8jaw:I (2.51) BS02 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    836198 8jaw:J (2.51) BS01 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    836199 8jaw:K (2.51) BS01 BTI 6.4.1.4 GO:0004075 ... Q96RQ3 39223421
    836200 8jaw:L (2.51) BS01 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
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