SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    837601 8jgp:A (3.02) BS02 PO4 ? GO:0016462 ... Q9RYW9 38682481
    837602 8jgq:A (2.5) BS01 UG3 ? GO:0016462 ... Q9RYW9 38682481
    837603 8jgq:A (2.5) BS02 MG ? GO:0016462 ... Q9RYW9 38682481
    837604 8jgr:A (2.5) BS01 PO4 ? GO:0016462 ... Q9RYW9 38682481
    837605 8jgr:A (2.5) BS02 PO4 ? GO:0016462 ... Q9RYW9 38682481
    837606 8jgt:A (2.2) BS01 MG ? GO:0016462 ... Q9RYW9 38682481
    837607 8jgv:A (2.98) BS01 ATP N/A GO:0005247 ... P51791 39107281
    837608 8jgv:B (2.98) BS01 ATP N/A GO:0005247 ... P51791 39107281
    837609 8jgw:A (1.8) BS01 MG N/A GO:0004309 ... A0A171A1Q0 38682481
    837610 8jh0:A (2.79) BS01 RET ? GO:0007602 ... S2D3K4 37890784
    837611 8jh0:B (2.79) BS01 RET ? GO:0007602 ... S2D3K4 37890784
    837612 8jh1:A (2.89) BS01 rna 3.1.-.- GO:0004519 ... Q53W17 38177499
    837613 8jh1:B (2.89) BS01 rna 3.1.-.- GO:0004519 ... Q53W17 38177499
    837614 8jh2:A (5.7) BS01 rna 2.7.7.6 GO:0000428 ... C4R4Y0 37981206
    837615 8jh2:A (5.7) BS02 dna 2.7.7.6 GO:0000428 ... C4R4Y0 37981206
    837616 8jh2:A (5.7) BS03 ZN 2.7.7.6 GO:0000428 ... C4R4Y0 37981206
    837617 8jh2:A (5.7) BS04 ZN 2.7.7.6 GO:0000428 ... C4R4Y0 37981206
    837618 8jh2:A (5.7) BS05 MG 2.7.7.6 GO:0000428 ... C4R4Y0 37981206
    837619 8jh2:B (5.7) BS01 rna 2.7.7.6 GO:0000428 ... C4QZQ7 37981206
    837620 8jh2:B (5.7) BS02 dna 2.7.7.6 GO:0000428 ... C4QZQ7 37981206
    837621 8jh2:B (5.7) BS03 ZN 2.7.7.6 GO:0000428 ... C4QZQ7 37981206
    837622 8jh2:C (5.7) BS01 ZN ? GO:0000428 ... C4R7L2 37981206
    837623 8jh2:I (5.7) BS01 ZN ? GO:0000428 ... F2QPE6 37981206
    837624 8jh2:I (5.7) BS02 ZN ? GO:0000428 ... F2QPE6 37981206
    837625 8jh2:J (5.7) BS01 ZN ? GO:0000428 ... C4R009 37981206
    837626 8jh2:L (5.7) BS01 ZN ? GO:0001054 ... F2QMI1 37981206
    837627 8jh2:M (5.7) BS01 ZN ? GO:0000993 ... C4QZ45 37981206
    837628 8jh2:V (5.7) BS01 ZN ? GO:0000775 ... C4R0E6 37981206
    837629 8jh2:W (5.7) BS01 dna ? GO:0003711 ... C4R370 37981206
    837630 8jh2:a (5.7) BS01 dna ? GO:0000775 ... P84243 37981206
    837631 8jh2:a (5.7) BS02 dna ? GO:0000775 ... P84243 37981206
    837632 8jh2:c (5.7) BS01 dna ? GO:0000786 ... P04908 37981206
    837633 8jh2:c (5.7) BS02 dna ? GO:0000786 ... P04908 37981206
    837634 8jh2:d (5.7) BS01 dna ? GO:0000786 ... P06899 37981206
    837635 8jh2:e (5.7) BS01 dna ? GO:0000775 ... P84243 37981206
    837636 8jh2:e (5.7) BS02 dna ? GO:0000775 ... P84243 37981206
    837637 8jh2:f (5.7) BS01 dna ? GO:0000781 ... P62805 37981206
    837638 8jh2:g (5.7) BS01 dna ? GO:0000786 ... P04908 37981206
    837639 8jh2:h (5.7) BS01 dna ? GO:0000786 ... P06899 37981206
    837640 8jh3:A (3.7) BS01 rna 2.7.7.6 GO:0000428 ... C4R4Y0 37981206
    837641 8jh3:A (3.7) BS02 dna 2.7.7.6 GO:0000428 ... C4R4Y0 37981206
    837642 8jh3:A (3.7) BS03 ZN 2.7.7.6 GO:0000428 ... C4R4Y0 37981206
    837643 8jh3:A (3.7) BS04 ZN 2.7.7.6 GO:0000428 ... C4R4Y0 37981206
    837644 8jh3:A (3.7) BS05 MG 2.7.7.6 GO:0000428 ... C4R4Y0 37981206
    837645 8jh3:B (3.7) BS01 rna 2.7.7.6 GO:0000428 ... C4QZQ7 37981206
    837646 8jh3:B (3.7) BS02 dna 2.7.7.6 GO:0000428 ... C4QZQ7 37981206
    837647 8jh3:B (3.7) BS03 ZN 2.7.7.6 GO:0000428 ... C4QZQ7 37981206
    837648 8jh3:C (3.7) BS01 ZN ? GO:0000428 ... C4R7L2 37981206
    837649 8jh3:I (3.7) BS01 ZN ? GO:0000428 ... F2QPE6 37981206
    837650 8jh3:I (3.7) BS02 ZN ? GO:0000428 ... F2QPE6 37981206
    837651 8jh3:J (3.7) BS01 ZN ? GO:0000428 ... C4R009 37981206
    837652 8jh3:L (3.7) BS01 ZN ? GO:0001054 ... F2QMI1 37981206
    837653 8jh3:a (3.7) BS01 dna ? GO:0000775 ... P84243 37981206
    837654 8jh3:a (3.7) BS02 dna ? GO:0000775 ... P84243 37981206
    837655 8jh3:b (3.7) BS01 dna ? GO:0000781 ... P62805 37981206
    837656 8jh3:c (3.7) BS01 dna ? GO:0000786 ... P04908 37981206
    837657 8jh3:c (3.7) BS02 dna ? GO:0000786 ... P04908 37981206
    837658 8jh3:d (3.7) BS01 dna ? GO:0000786 ... P06899 37981206
    837659 8jh3:e (3.7) BS01 dna ? GO:0000775 ... P84243 37981206
    837660 8jh3:g (3.7) BS01 dna ? GO:0000786 ... P04908 37981206
    837661 8jh3:h (3.7) BS01 dna ? GO:0000786 ... P06899 37981206
    837662 8jh4:A (3.2) BS01 dna 2.7.7.6 GO:0000428 ... C4R4Y0 37981206
    837663 8jh4:A (3.2) BS02 rna 2.7.7.6 GO:0000428 ... C4R4Y0 37981206
    837664 8jh4:A (3.2) BS03 dna 2.7.7.6 GO:0000428 ... C4R4Y0 37981206
    837665 8jh4:A (3.2) BS04 ZN 2.7.7.6 GO:0000428 ... C4R4Y0 37981206
    837666 8jh4:A (3.2) BS05 ZN 2.7.7.6 GO:0000428 ... C4R4Y0 37981206
    837667 8jh4:A (3.2) BS06 MG 2.7.7.6 GO:0000428 ... C4R4Y0 37981206
    837668 8jh4:B (3.2) BS01 rna 2.7.7.6 GO:0000428 ... C4QZQ7 37981206
    837669 8jh4:B (3.2) BS02 dna 2.7.7.6 GO:0000428 ... C4QZQ7 37981206
    837670 8jh4:B (3.2) BS03 ZN 2.7.7.6 GO:0000428 ... C4QZQ7 37981206
    837671 8jh4:C (3.2) BS01 ZN ? GO:0000428 ... C4R7L2 37981206
    837672 8jh4:E (3.2) BS01 dna ? GO:0001054 ... C4R3P8 37981206
    837673 8jh4:I (3.2) BS01 ZN ? GO:0000428 ... F2QPE6 37981206
    837674 8jh4:J (3.2) BS01 ZN ? GO:0000428 ... C4R009 37981206
    837675 8jh4:L (3.2) BS01 ZN ? GO:0001054 ... F2QMI1 37981206
    837676 8jh4:a (3.2) BS01 dna ? GO:0000775 ... P84243 37981206
    837677 8jh4:a (3.2) BS02 dna ? GO:0000775 ... P84243 37981206
    837678 8jh4:b (3.2) BS01 dna ? GO:0000781 ... P62805 37981206
    837679 8jh4:b (3.2) BS02 dna ? GO:0000781 ... P62805 37981206
    837680 8jh4:c (3.2) BS01 dna ? GO:0000786 ... P04908 37981206
    837681 8jh4:c (3.2) BS02 dna ? GO:0000786 ... P04908 37981206
    837682 8jh4:d (3.2) BS01 dna ? GO:0000786 ... P06899 37981206
    837683 8jh4:d (3.2) BS02 dna ? GO:0000786 ... P06899 37981206
    837684 8jh4:e (3.2) BS01 dna ? GO:0000775 ... P84243 37981206
    837685 8jh4:e (3.2) BS02 dna ? GO:0000775 ... P84243 37981206
    837686 8jh4:f (3.2) BS01 dna ? GO:0000781 ... P62805 37981206
    837687 8jh4:g (3.2) BS01 dna ? GO:0000786 ... P04908 37981206
    837688 8jh4:g (3.2) BS02 dna ? GO:0000786 ... P04908 37981206
    837689 8jh5:A (3.7) BS01 NPS ? GO:0005515 ... Q9C6B8 N/A
    837690 8jh5:B (3.7) BS01 NPS ? GO:0005515 ... Q9C6B8 N/A
    837691 8jh6:A (1.8) BS01 GG2 N/A N/A N/A N/A
    837692 8jh6:B (1.8) BS01 GG2 N/A N/A N/A N/A
    837693 8jh8:A (1.55) BS01 MG N/A GO:0030600 ... N/A N/A
    837694 8jh9:A (2.0) BS01 FER N/A GO:0030600 ... N/A N/A
    837695 8jhe:A (2.201) BS01 FAD N/A GO:0016491 ... N/A 37737277
    837696 8jhe:B (2.201) BS01 FAD N/A GO:0016491 ... N/A 37737277
    837697 8jhe:C (2.201) BS01 FAD N/A GO:0016491 ... N/A 37737277
    837698 8jhe:D (2.201) BS01 FAD N/A GO:0016491 ... N/A 37737277
    837699 8jhf:A (3.68) BS01 dna ? GO:0000786 ... P68431 38052811
    837700 8jhf:A (3.68) BS02 dna ? GO:0000786 ... P68431 38052811
    837701 8jhf:B (3.68) BS01 dna ? GO:0003677 ... P62805 38052811
    837702 8jhf:B (3.68) BS02 dna ? GO:0003677 ... P62805 38052811
    837703 8jhf:C (3.68) BS01 dna ? GO:0000786 ... P0C0S5 38052811
    837704 8jhf:C (3.68) BS02 dna ? GO:0000786 ... P0C0S5 38052811
    837705 8jhf:D (3.68) BS01 dna ? GO:0000786 ... O60814 38052811
    837706 8jhf:E (3.68) BS01 dna ? GO:0000786 ... P68431 38052811
    837707 8jhf:E (3.68) BS02 dna ? GO:0000786 ... P68431 38052811
    837708 8jhf:F (3.68) BS01 dna ? GO:0003677 ... P62805 38052811
    837709 8jhf:F (3.68) BS02 dna ? GO:0003677 ... P62805 38052811
    837710 8jhf:F (3.68) BS03 SAM ? GO:0003677 ... P62805 38052811
    837711 8jhf:G (3.68) BS01 dna ? GO:0000786 ... P0C0S5 38052811
    837712 8jhf:G (3.68) BS02 dna ? GO:0000786 ... P0C0S5 38052811
    837713 8jhf:H (3.68) BS01 dna ? GO:0000786 ... O60814 38052811
    837714 8jhf:K (3.68) BS01 ZN 2.1.1.361
    2.1.1.362
    GO:0042799 ... Q4FZB7 38052811
    837715 8jhf:K (3.68) BS02 SAM 2.1.1.361
    2.1.1.362
    GO:0042799 ... Q4FZB7 38052811
    837716 8jhg:A (3.58) BS01 dna ? GO:0000786 ... P68431 38052811
    837717 8jhg:A (3.58) BS02 dna ? GO:0000786 ... P68431 38052811
    837718 8jhg:B (3.58) BS01 dna ? GO:0003677 ... P62805 38052811
    837719 8jhg:B (3.58) BS02 dna ? GO:0003677 ... P62805 38052811
    837720 8jhg:C (3.58) BS01 dna ? GO:0000786 ... P04908 38052811
    837721 8jhg:C (3.58) BS02 dna ? GO:0000786 ... P04908 38052811
    837722 8jhg:D (3.58) BS01 dna ? GO:0000786 ... O60814 38052811
    837723 8jhg:E (3.58) BS01 dna ? GO:0000786 ... P68431 38052811
    837724 8jhg:E (3.58) BS02 dna ? GO:0000786 ... P68431 38052811
    837725 8jhg:F (3.58) BS01 dna ? GO:0003677 ... P62805 38052811
    837726 8jhg:G (3.58) BS01 dna ? GO:0000786 ... P04908 38052811
    837727 8jhg:H (3.58) BS01 dna ? GO:0000786 ... O60814 38052811
    837728 8jhg:K (3.58) BS01 SAM 2.1.1.361
    2.1.1.362
    GO:0042799 ... Q4FZB7 38052811
    837729 8jhl:A (2.10004) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 37534597
    837730 8jhl:A (2.10004) BS02 DNU 3.6.5.2 GO:0003924 ... P01116 37534597
    837731 8jhn:D (3.75) BS01 UR9 ? GO:0001781 ... P08173
    Q8TDS4
    38431681
    837732 8jho:A (7.6) BS01 dna ? GO:0000786 ... P84233 37798513
    837733 8jho:A (7.6) BS02 dna ? GO:0000786 ... P84233 37798513
    837734 8jho:B (7.6) BS01 dna ? GO:0000786 ... P62799 37798513
    837735 8jho:B (7.6) BS02 dna ? GO:0000786 ... P62799 37798513
    837736 8jho:C (7.6) BS01 dna ? GO:0000786 ... P06897 37798513
    837737 8jho:C (7.6) BS02 dna ? GO:0000786 ... P06897 37798513
    837738 8jho:D (7.6) BS01 dna ? GO:0000786 ... P02281 37798513
    837739 8jho:D (7.6) BS02 dna ? GO:0000786 ... P02281 37798513
    837740 8jho:E (7.6) BS01 dna ? GO:0000786 ... P84233 37798513
    837741 8jho:E (7.6) BS02 dna ? GO:0000786 ... P84233 37798513
    837742 8jho:F (7.6) BS01 dna ? GO:0000786 ... P62799 37798513
    837743 8jho:G (7.6) BS01 dna ? GO:0000786 ... P06897 37798513
    837744 8jho:G (7.6) BS02 dna ? GO:0000786 ... P06897 37798513
    837745 8jho:H (7.6) BS01 dna ? GO:0000786 ... P02281 37798513
    837746 8jho:H (7.6) BS02 dna ? GO:0000786 ... P02281 37798513
    837747 8jho:K (7.6) BS01 dna ? GO:0000086 ... P22579 37798513
    837748 8jho:L (7.6) BS01 ZN 3.5.1.98 GO:0000082 ... P32561 37798513
    837749 8jho:M (7.6) BS01 dna ? GO:0000122 ... Q12432 37798513
    837750 8jho:N (7.6) BS01 ZN ? GO:0000118 ... Q04779 37798513
    837751 8jho:N (7.6) BS02 ZN ? GO:0000118 ... Q04779 37798513
    837752 8jho:N (7.6) BS03 ZN ? GO:0000118 ... Q04779 37798513
    837753 8jho:N (7.6) BS04 ZN ? GO:0000118 ... Q04779 37798513
    837754 8jho:O (7.6) BS01 dna ? GO:0000122 ... Q12432 37798513
    837755 8jho:P (7.6) BS01 ZN ? GO:0000118 ... Q04779 37798513
    837756 8jho:P (7.6) BS02 ZN ? GO:0000118 ... Q04779 37798513
    837757 8jho:a (7.6) BS01 dna ? GO:0000786 ... P84233 37798513
    837758 8jho:a (7.6) BS02 dna ? GO:0000786 ... P84233 37798513
    837759 8jho:b (7.6) BS01 dna ? GO:0000786 ... P62799 37798513
    837760 8jho:b (7.6) BS02 dna ? GO:0000786 ... P62799 37798513
    837761 8jho:c (7.6) BS01 dna ? GO:0000786 ... P06897 37798513
    837762 8jho:c (7.6) BS02 dna ? GO:0000786 ... P06897 37798513
    837763 8jho:d (7.6) BS01 dna ? GO:0000786 ... P02281 37798513
    837764 8jho:d (7.6) BS02 dna ? GO:0000786 ... P02281 37798513
    837765 8jho:e (7.6) BS01 dna ? GO:0000786 ... P84233 37798513
    837766 8jho:e (7.6) BS02 dna ? GO:0000786 ... P84233 37798513
    837767 8jho:f (7.6) BS01 dna ? GO:0000786 ... P62799 37798513
    837768 8jho:f (7.6) BS02 dna ? GO:0000786 ... P62799 37798513
    837769 8jho:g (7.6) BS01 dna ? GO:0000786 ... P06897 37798513
    837770 8jho:g (7.6) BS02 dna ? GO:0000786 ... P06897 37798513
    837771 8jho:h (7.6) BS01 dna ? GO:0000786 ... P02281 37798513
    837772 8jho:h (7.6) BS02 dna ? GO:0000786 ... P02281 37798513
    837773 8jhq:A (3.6) BS01 S1P ? GO:0022857 ... Q8IVW8
    Q9V2J8
    38123824
    837774 8jhv:A (3.47) BS01 peptide ? N/A P01901 N/A
    837775 8jhv:D (3.47) BS01 peptide ? N/A P01901 N/A
    837776 8jhw:A (3.12) BS01 peptide ? N/A P01901 N/A
    837777 8jhy:A (2.87) BS01 IX8 ? GO:0001781 ... Q8TDS4 37597514
    837778 8jhy:A (2.87) BS02 CLR ? GO:0001781 ... Q8TDS4 37597514
    837779 8jhz:A (3.2) BS01 ZN ? GO:0005576 ... M9ZTT7 38438396
    837780 8ji2:A (1.75) BS01 FE2 ? GO:0046872 ... A0A861B387 37973794
    837781 8ji2:A (1.75) BS02 67I ? GO:0046872 ... A0A861B387 37973794
    837782 8ji2:B (1.75) BS01 FE2 ? GO:0046872 ... A0A861B387 37973794
    837783 8ji2:B (1.75) BS02 67I ? GO:0046872 ... A0A861B387 37973794
    837784 8ji3:A (1.78) BS01 FE2 ? GO:0046872 ... A0A861B387 37973794
    837785 8ji3:A (1.78) BS02 FE2 ? GO:0046872 ... A0A861B387 37973794
    837786 8ji3:A (1.78) BS03 67I ? GO:0046872 ... A0A861B387 37973794
    837787 8ji3:B (1.78) BS01 FE2 ? GO:0046872 ... A0A861B387 37973794
    837788 8ji3:B (1.78) BS02 FE2 ? GO:0046872 ... A0A861B387 37973794
    837789 8ji3:B (1.78) BS03 67I ? GO:0046872 ... A0A861B387 37973794
    837790 8ji4:A (1.67) BS01 FE2 ? GO:0046872 ... A0A861B387 37973794
    837791 8ji4:A (1.67) BS02 64X ? GO:0046872 ... A0A861B387 37973794
    837792 8ji4:B (1.67) BS01 FE2 ? GO:0046872 ... A0A861B387 37973794
    837793 8ji4:B (1.67) BS02 64X ? GO:0046872 ... A0A861B387 37973794
    837794 8ji5:A (2.01) BS01 FE2 ? GO:0046872 ... A0A861B387 37973794
    837795 8ji5:A (2.01) BS02 FE2 ? GO:0046872 ... A0A861B387 37973794
    837796 8ji5:A (2.01) BS03 64X ? GO:0046872 ... A0A861B387 37973794
    837797 8ji5:B (2.01) BS01 FE2 ? GO:0046872 ... A0A861B387 37973794
    837798 8ji5:B (2.01) BS02 FE2 ? GO:0046872 ... A0A861B387 37973794
    837799 8ji5:B (2.01) BS03 64X ? GO:0046872 ... A0A861B387 37973794
    837800 8ji6:A (1.9) BS01 FE2 ? GO:0046872 ... A0A861B387 37973794

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).