SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4181 4182 4183 4184 4185 4186 4187 4188 4189 4190 4191 4192 4193 4194 4195 4196 4197 4198 4199 4200 4201 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    838001 8j0d:3 (3.19) BS05 CLA ? GO:0009416 ... B8BUU4 37878698
    838002 8j0d:3 (3.19) BS06 CLA ? GO:0009416 ... B8BUU4 37878698
    838003 8j0d:3 (3.19) BS07 CLA ? GO:0009416 ... B8BUU4 37878698
    838004 8j0d:3 (3.19) BS08 KC1 ? GO:0009416 ... B8BUU4 37878698
    838005 8j0d:3 (3.19) BS09 CLA ? GO:0009416 ... B8BUU4 37878698
    838006 8j0d:3 (3.19) BS10 CLA ? GO:0009416 ... B8BUU4 37878698
    838007 8j0d:3 (3.19) BS11 A86 ? GO:0009416 ... B8BUU4 37878698
    838008 8j0d:3 (3.19) BS12 DD6 ? GO:0009416 ... B8BUU4 37878698
    838009 8j0d:3 (3.19) BS13 A86 ? GO:0009416 ... B8BUU4 37878698
    838010 8j0d:3 (3.19) BS14 CLA ? GO:0009416 ... B8BUU4 37878698
    838011 8j0d:4 (3.19) BS01 CLA ? GO:0009416 ... B8BVI1 37878698
    838012 8j0d:4 (3.19) BS02 A86 ? GO:0009416 ... B8BVI1 37878698
    838013 8j0d:4 (3.19) BS03 DD6 ? GO:0009416 ... B8BVI1 37878698
    838014 8j0d:4 (3.19) BS04 A86 ? GO:0009416 ... B8BVI1 37878698
    838015 8j0d:4 (3.19) BS05 CLA ? GO:0009416 ... B8BVI1 37878698
    838016 8j0d:4 (3.19) BS06 CLA ? GO:0009416 ... B8BVI1 37878698
    838017 8j0d:4 (3.19) BS07 KC2 ? GO:0009416 ... B8BVI1 37878698
    838018 8j0d:4 (3.19) BS08 CLA ? GO:0009416 ... B8BVI1 37878698
    838019 8j0d:4 (3.19) BS09 CLA ? GO:0009416 ... B8BVI1 37878698
    838020 8j0d:4 (3.19) BS10 CLA ? GO:0009416 ... B8BVI1 37878698
    838021 8j0d:4 (3.19) BS11 CLA ? GO:0009416 ... B8BVI1 37878698
    838022 8j0d:4 (3.19) BS12 CLA ? GO:0009416 ... B8BVI1 37878698
    838023 8j0d:4 (3.19) BS13 CLA ? GO:0009416 ... B8BVI1 37878698
    838024 8j0d:4 (3.19) BS14 CLA ? GO:0009416 ... B8BVI1 37878698
    838025 8j0d:4 (3.19) BS15 CLA ? GO:0009416 ... B8BVI1 37878698
    838026 8j0d:4 (3.19) BS16 CLA ? GO:0009416 ... B8BVI1 37878698
    838027 8j0d:5 (3.19) BS01 CLA ? GO:0009765 ... B8BX92 37878698
    838028 8j0d:5 (3.19) BS02 A86 ? GO:0009765 ... B8BX92 37878698
    838029 8j0d:5 (3.19) BS03 A86 ? GO:0009765 ... B8BX92 37878698
    838030 8j0d:5 (3.19) BS04 A86 ? GO:0009765 ... B8BX92 37878698
    838031 8j0d:5 (3.19) BS05 A86 ? GO:0009765 ... B8BX92 37878698
    838032 8j0d:5 (3.19) BS06 CLA ? GO:0009765 ... B8BX92 37878698
    838033 8j0d:5 (3.19) BS07 CLA ? GO:0009765 ... B8BX92 37878698
    838034 8j0d:5 (3.19) BS08 KC2 ? GO:0009765 ... B8BX92 37878698
    838035 8j0d:5 (3.19) BS09 CLA ? GO:0009765 ... B8BX92 37878698
    838036 8j0d:5 (3.19) BS10 CLA ? GO:0009765 ... B8BX92 37878698
    838037 8j0d:5 (3.19) BS11 CLA ? GO:0009765 ... B8BX92 37878698
    838038 8j0d:5 (3.19) BS12 CLA ? GO:0009765 ... B8BX92 37878698
    838039 8j0d:5 (3.19) BS13 KC1 ? GO:0009765 ... B8BX92 37878698
    838040 8j0d:5 (3.19) BS14 CLA ? GO:0009765 ... B8BX92 37878698
    838041 8j0d:6 (3.19) BS01 CLA ? GO:0009416 ... B8CEV5 37878698
    838042 8j0d:6 (3.19) BS02 A86 ? GO:0009416 ... B8CEV5 37878698
    838043 8j0d:6 (3.19) BS03 A86 ? GO:0009416 ... B8CEV5 37878698
    838044 8j0d:6 (3.19) BS04 A86 ? GO:0009416 ... B8CEV5 37878698
    838045 8j0d:6 (3.19) BS05 CLA ? GO:0009416 ... B8CEV5 37878698
    838046 8j0d:6 (3.19) BS06 CLA ? GO:0009416 ... B8CEV5 37878698
    838047 8j0d:6 (3.19) BS07 KC2 ? GO:0009416 ... B8CEV5 37878698
    838048 8j0d:6 (3.19) BS08 CLA ? GO:0009416 ... B8CEV5 37878698
    838049 8j0d:6 (3.19) BS09 CLA ? GO:0009416 ... B8CEV5 37878698
    838050 8j0d:6 (3.19) BS10 CLA ? GO:0009416 ... B8CEV5 37878698
    838051 8j0d:6 (3.19) BS11 CLA ? GO:0009416 ... B8CEV5 37878698
    838052 8j0d:6 (3.19) BS12 KC1 ? GO:0009416 ... B8CEV5 37878698
    838053 8j0d:6 (3.19) BS13 CLA ? GO:0009416 ... B8CEV5 37878698
    838054 8j0d:6 (3.19) BS14 CLA ? GO:0009416 ... B8CEV5 37878698
    838055 8j0e:B (3.4) BS01 peptide 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 N/A
    838056 8j0e:B (3.4) BS02 peptide 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 N/A
    838057 8j0e:B (3.4) BS03 TKC 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 N/A
    838058 8j0e:B (3.4) BS04 MG 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 N/A
    838059 8j0f:A (3.3) BS01 peptide 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    838060 8j0f:A (3.3) BS02 peptide 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    838061 8j0f:A (3.3) BS03 ADP 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    838062 8j0f:A (3.3) BS04 RGP 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    838063 8j0f:A (3.3) BS05 MG 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    838064 8j0f:B (3.3) BS01 peptide 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    838065 8j0f:B (3.3) BS02 peptide 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    838066 8j0f:B (3.3) BS03 ADP 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    838067 8j0f:B (3.3) BS04 RGP 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    838068 8j0f:B (3.3) BS05 MG 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    838069 8j0f:C (3.3) BS01 peptide 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    838070 8j0f:C (3.3) BS02 peptide 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    838071 8j0f:C (3.3) BS03 ADP 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    838072 8j0f:C (3.3) BS04 RGP 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    838073 8j0f:C (3.3) BS05 MG 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    838074 8j0f:D (3.3) BS01 peptide 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    838075 8j0f:D (3.3) BS02 peptide 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    838076 8j0f:D (3.3) BS03 ADP 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    838077 8j0f:D (3.3) BS04 RGP 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    838078 8j0f:D (3.3) BS05 MG 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 38740943
    838079 8j0g:B (3.7) BS01 peptide 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 N/A
    838080 8j0g:B (3.7) BS02 MG 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 N/A
    838081 8j0g:B (3.7) BS03 GGL 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 N/A
    838082 8j0g:B (3.7) BS04 ATP 1.2.1.41
    2.7.2.11
    GO:0003824 ... P54888 N/A
    838083 8j0j:A (2.7) BS01 Y01 ? GO:0005515 ... P42212
    Q9LD83
    37963863
    838084 8j0j:A (2.7) BS02 Y01 ? GO:0005515 ... P42212
    Q9LD83
    37963863
    838085 8j0j:B (2.7) BS01 Y01 ? GO:0005515 ... P42212
    Q9LD83
    37963863
    838086 8j0j:B (2.7) BS02 Y01 ? GO:0005515 ... P42212
    Q9LD83
    37963863
    838087 8j0j:C (2.7) BS01 Y01 ? GO:0005515 ... P42212
    Q9LD83
    37963863
    838088 8j0j:C (2.7) BS02 Y01 ? GO:0005515 ... P42212
    Q9LD83
    37963863
    838089 8j0k:A (2.1) BS01 dna ? GO:0003700 ... P05549 37409559
    838090 8j0k:A (2.1) BS02 dna ? GO:0003700 ... P05549 37409559
    838091 8j0k:A (2.1) BS03 PG3 ? GO:0003700 ... P05549 37409559
    838092 8j0k:B (2.1) BS01 dna ? GO:0003700 ... P05549 37409559
    838093 8j0k:B (2.1) BS02 dna ? GO:0003700 ... P05549 37409559
    838094 8j0k:B (2.1) BS03 PG3 ? GO:0003700 ... P05549 37409559
    838095 8j0r:A (2.1) BS01 dna ? GO:0003700 ... P05549 37409559
    838096 8j0r:A (2.1) BS02 dna ? GO:0003700 ... P05549 37409559
    838097 8j0r:A (2.1) BS03 PG3 ? GO:0003700 ... P05549 37409559
    838098 8j0r:B (2.1) BS01 dna ? GO:0003700 ... P05549 37409559
    838099 8j0r:B (2.1) BS02 dna ? GO:0003700 ... P05549 37409559
    838100 8j0s:1 (2.58) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    838101 8j0s:1 (2.58) BS02 BQ1 ? GO:0005886 ... P9WPS1 38961288
    838102 8j0s:2 (2.58) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    838103 8j0s:4 (2.58) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    838104 8j0s:5 (2.58) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    838105 8j0s:5 (2.58) BS02 BQ1 ? GO:0005886 ... P9WPS1 38961288
    838106 8j0s:6 (2.58) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    838107 8j0s:6 (2.58) BS02 BQ1 ? GO:0005886 ... P9WPS1 38961288
    838108 8j0s:7 (2.58) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    838109 8j0s:7 (2.58) BS02 BQ1 ? GO:0005886 ... P9WPS1 38961288
    838110 8j0s:8 (2.58) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    838111 8j0s:8 (2.58) BS02 BQ1 ? GO:0005886 ... P9WPS1 38961288
    838112 8j0s:9 (2.58) BS01 BQ1 ? GO:0005886 ... P9WPS1 38961288
    838113 8j0s:9 (2.58) BS02 BQ1 ? GO:0005886 ... P9WPS1 38961288
    838114 8j0s:A (2.58) BS01 ATP 7.1.2.2 GO:0005524 ... P9WPU7 38961288
    838115 8j0s:B (2.58) BS01 ATP 7.1.2.2 GO:0005524 ... P9WPU7 38961288
    838116 8j0s:C (2.58) BS01 ATP 7.1.2.2 GO:0005524 ... P9WPU7 38961288
    838117 8j0s:C (2.58) BS02 ADP 7.1.2.2 GO:0005524 ... P9WPU7 38961288
    838118 8j0s:D (2.58) BS01 ADP 7.1.2.2 GO:0005524 ... P9WPU5 38961288
    838119 8j0s:F (2.58) BS01 ADP 7.1.2.2 GO:0005524 ... P9WPU5 38961288
    838120 8j0s:a (2.58) BS01 BQ1 ? GO:0005886 ... P9WPV7 38961288
    838121 8j0s:a (2.58) BS02 BQ1 ? GO:0005886 ... P9WPV7 38961288
    838122 8j0t:A (2.8) BS01 ATP 7.1.2.2 GO:0005524 ... P9WPU7 38961288
    838123 8j0t:B (2.8) BS01 ATP 7.1.2.2 GO:0005524 ... P9WPU7 38961288
    838124 8j0t:C (2.8) BS01 ATP 7.1.2.2 GO:0005524 ... P9WPU7 38961288
    838125 8j0t:C (2.8) BS02 ADP 7.1.2.2 GO:0005524 ... P9WPU7 38961288
    838126 8j0t:D (2.8) BS01 ADP 7.1.2.2 GO:0005524 ... P9WPU5 38961288
    838127 8j0t:F (2.8) BS01 ADP 7.1.2.2 GO:0005524 ... P9WPU5 38961288
    838128 8j12:A (3.08) BS01 dna 3.1.-.- N/A A0A2U3D0N8 37776859
    838129 8j12:A (3.08) BS02 dna 3.1.-.- N/A A0A2U3D0N8 37776859
    838130 8j12:A (3.08) BS03 rna 3.1.-.- N/A A0A2U3D0N8 37776859
    838131 8j12:A (3.08) BS04 ZN 3.1.-.- N/A A0A2U3D0N8 37776859
    838132 8j12:B (3.08) BS01 dna 3.1.-.- N/A A0A2U3D0N8 37776859
    838133 8j12:B (3.08) BS02 rna 3.1.-.- N/A A0A2U3D0N8 37776859
    838134 8j12:B (3.08) BS03 ZN 3.1.-.- N/A A0A2U3D0N8 37776859
    838135 8j18:R (2.89) BS01 HXD ? GO:0001604 ... Q9NQS5 37277332
    838136 8j19:R (3.23) BS01 SWO ? GO:0001604 ... Q9NQS5 37277332
    838137 8j1b:A (3.72) BS01 XQ3 ? GO:0005216 ... Q9EPK8 37429860
    838138 8j1b:A (3.72) BS02 R2R ? GO:0005216 ... Q9EPK8 37429860
    838139 8j1b:B (3.72) BS01 R2R ? GO:0005216 ... Q9EPK8 37429860
    838140 8j1b:B (3.72) BS02 XQ3 ? GO:0005216 ... Q9EPK8 37429860
    838141 8j1b:C (3.72) BS01 R2R ? GO:0005216 ... Q9EPK8 37429860
    838142 8j1b:C (3.72) BS02 XQ3 ? GO:0005216 ... Q9EPK8 37429860
    838143 8j1b:D (3.72) BS01 R2R ? GO:0005216 ... Q9EPK8 37429860
    838144 8j1b:D (3.72) BS02 XQ3 ? GO:0005216 ... Q9EPK8 37429860
    838145 8j1c:A (2.2) BS01 NAP ? GO:0005737 ... A0A7Y0ZV07 37524275
    838146 8j1c:B (2.2) BS01 NAP ? GO:0005737 ... A0A7Y0ZV07 37524275
    838147 8j1c:B (2.2) BS02 LYS ? GO:0005737 ... A0A7Y0ZV07 37524275
    838148 8j1c:D (2.2) BS01 NAP ? GO:0005737 ... A0A7Y0ZV07 37524275
    838149 8j1e:A (3.84) BS01 Y01 ? GO:0005515 ... P42212
    Q9LD83
    37963863
    838150 8j1e:A (3.84) BS02 Y01 ? GO:0005515 ... P42212
    Q9LD83
    37963863
    838151 8j1e:B (3.84) BS01 Y01 ? GO:0005515 ... P42212
    Q9LD83
    37963863
    838152 8j1e:B (3.84) BS02 Y01 ? GO:0005515 ... P42212
    Q9LD83
    37963863
    838153 8j1e:C (3.84) BS01 Y01 ? GO:0005515 ... P42212
    Q9LD83
    37963863
    838154 8j1e:C (3.84) BS02 Y01 ? GO:0005515 ... P42212
    Q9LD83
    37963863
    838155 8j1f:A (3.62) BS01 XQ3 ? GO:0005216 ... Q9EPK8 37429860
    838156 8j1f:B (3.62) BS01 XQ3 ? GO:0005216 ... Q9EPK8 37429860
    838157 8j1f:C (3.62) BS01 XQ3 ? GO:0005216 ... Q9EPK8 37429860
    838158 8j1f:D (3.62) BS01 XQ3 ? GO:0005216 ... Q9EPK8 37429860
    838159 8j1g:A (2.5) BS01 NDP ? GO:0005737 ... A0A7Y0ZV07 37524275
    838160 8j1g:A (2.5) BS02 ARG ? GO:0005737 ... A0A7Y0ZV07 37524275
    838161 8j1g:B (2.5) BS01 NDP ? GO:0005737 ... A0A7Y0ZV07 37524275
    838162 8j1g:B (2.5) BS02 ARG ? GO:0005737 ... A0A7Y0ZV07 37524275
    838163 8j1g:C (2.5) BS01 NDP ? GO:0005737 ... A0A7Y0ZV07 37524275
    838164 8j1g:C (2.5) BS02 ARG ? GO:0005737 ... A0A7Y0ZV07 37524275
    838165 8j1g:D (2.5) BS01 NDP ? GO:0005737 ... A0A7Y0ZV07 37524275
    838166 8j1g:D (2.5) BS02 ARG ? GO:0005737 ... A0A7Y0ZV07 37524275
    838167 8j1h:A (3.88) BS01 9QM ? GO:0005216 ... Q9EPK8 37429860
    838168 8j1h:B (3.88) BS01 9QM ? GO:0005216 ... Q9EPK8 37429860
    838169 8j1h:C (3.88) BS01 9QM ? GO:0005216 ... Q9EPK8 37429860
    838170 8j1h:D (3.88) BS01 9QM ? GO:0005216 ... Q9EPK8 37429860
    838171 8j1j:A (2.91) BS01 dna 3.1.-.- N/A A0A2U3D0N8 37776859
    838172 8j1j:A (2.91) BS02 dna 3.1.-.- N/A A0A2U3D0N8 37776859
    838173 8j1j:A (2.91) BS03 rna 3.1.-.- N/A A0A2U3D0N8 37776859
    838174 8j1j:A (2.91) BS04 ZN 3.1.-.- N/A A0A2U3D0N8 37776859
    838175 8j1j:B (2.91) BS01 dna 3.1.-.- N/A A0A2U3D0N8 37776859
    838176 8j1j:B (2.91) BS02 rna 3.1.-.- N/A A0A2U3D0N8 37776859
    838177 8j1j:B (2.91) BS03 ZN 3.1.-.- N/A A0A2U3D0N8 37776859
    838178 8j1k:A (2.451) BS01 SY6 1.14.11.29 GO:0005506 ... Q9GZT9 N/A
    838179 8j1k:A (2.451) BS02 MN 1.14.11.29 GO:0005506 ... Q9GZT9 N/A
    838180 8j1m:A (1.952) BS01 MPG N/A GO:0005385 ... A0A0H3LM39 39345646
    838181 8j1m:A (1.952) BS02 MPG N/A GO:0005385 ... A0A0H3LM39 39345646
    838182 8j1m:A (1.952) BS03 MPG N/A GO:0005385 ... A0A0H3LM39 39345646
    838183 8j1m:A (1.952) BS04 MPG N/A GO:0005385 ... A0A0H3LM39 39345646
    838184 8j1n:A (2.51) BS01 DNF ? GO:0002024 ... P25874 37336486
    838185 8j1o:A (1.991) BS01 TN9 N/A GO:0003824 ... N/A 37637744
    838186 8j1q:C (3.3) BS01 dna ? N/A P0DTC2 37375202
    838187 8j1q:C (3.3) BS02 dna ? N/A P0DTC2 37375202
    838188 8j1z:0 (2.6) BS01 rna ? GO:0000027 ... P0A7N9 N/A
    838189 8j1z:1 (2.6) BS01 rna ? GO:0002181 ... P0A7P5 N/A
    838190 8j1z:2 (2.6) BS01 rna ? GO:0002181 ... P0A7Q1 N/A
    838191 8j1z:c (2.6) BS01 rna ? GO:0000027 ... P60422 N/A
    838192 8j1z:d (2.6) BS01 rna ? GO:0000027 ... P60438 N/A
    838193 8j1z:e (2.6) BS01 rna ? GO:0001070 ... P60723 N/A
    838194 8j1z:f (2.6) BS01 rna ? GO:0000027 ... P62399 N/A
    838195 8j1z:f (2.6) BS02 rna ? GO:0000027 ... P62399 N/A
    838196 8j1z:h (2.6) BS01 rna ? GO:0002181 ... P0A7R1 N/A
    838197 8j1z:i (2.6) BS01 rna ? GO:0002181 ... P0AA10 N/A
    838198 8j1z:j (2.6) BS01 rna ? GO:0002181 ... P0ADY3 N/A
    838199 8j1z:k (2.6) BS01 rna ? GO:0002181 ... P02413 N/A
    838200 8j1z:m (2.6) BS01 rna ? GO:0000027 ... P0AG44 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).