SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    839401 8jti:F (3.8) BS03 MG N/A N/A P17980 N/A
    839402 8jtj:A (3.08) BS01 rna 3.1.-.- GO:0003676 ... A0A150MP45 N/A
    839403 8jtj:A (3.08) BS02 dna 3.1.-.- GO:0003676 ... A0A150MP45 N/A
    839404 8jtj:A (3.08) BS03 dna 3.1.-.- GO:0003676 ... A0A150MP45 N/A
    839405 8jtm:J (5.14) BS01 BMA N/A N/A N/A 38665238
    839406 8jtm:J (5.14) BS02 MAN N/A N/A N/A 38665238
    839407 8jtn:A (1.8) BS01 F5W ? N/A Q9H7E2 37499935
    839408 8jtn:A (1.8) BS02 F5W ? N/A Q9H7E2 37499935
    839409 8jtn:A (1.8) BS03 F5W ? N/A Q9H7E2 37499935
    839410 8jto:A (2.25) BS01 C8E N/A GO:0006811 ... A0A069BCC8 N/A
    839411 8jto:A (2.25) BS02 C8E N/A GO:0006811 ... A0A069BCC8 N/A
    839412 8jtr:A (3.21) BS01 rna 3.1.-.- GO:0003676 ... A0A150MP45 N/A
    839413 8jtt:A (3.87) BS01 MF8 ? GO:0005277 ... O15245 38485705
    839414 8jtv:A (3.77) BS01 MF8 ? GO:0005277 ... O15245 38485705
    839415 8jtz:A (3.27) BS01 SNL ? GO:0005277 ... O15245 38485705
    839416 8ju0:A (2.98) BS01 SNL ? GO:0005277 ... O15245 38485705
    839417 8ju4:A (2.3) BS01 FAD N/A GO:0000166 ... Q9RA02 N/A
    839418 8ju4:A (2.3) BS02 ANB N/A GO:0000166 ... Q9RA02 N/A
    839419 8ju5:B (3.74) BS01 F3L ? GO:0000122 ... Q9HBA0 38659239
    839420 8ju5:D (3.74) BS01 F3L ? GO:0000122 ... Q9HBA0 38659239
    839421 8ju6:A (3.45) BS01 XPW ? GO:0000122 ... Q9HBA0 38659239
    839422 8ju6:B (3.45) BS01 XPW ? GO:0000122 ... Q9HBA0 38659239
    839423 8ju6:C (3.45) BS01 XPW ? GO:0000122 ... Q9HBA0 38659239
    839424 8ju6:D (3.45) BS01 XPW ? GO:0000122 ... Q9HBA0 38659239
    839425 8ju9:A (2.0) BS01 KDP ? GO:0003677 ... Q9HTC8 38477394
    839426 8jua:A (2.00001) BS01 HEM ? GO:0004497 ... A0A0B4ZV78 37917570
    839427 8jua:A (2.00001) BS02 F7Z ? GO:0004497 ... A0A0B4ZV78 37917570
    839428 8jua:B (2.00001) BS01 HEM ? GO:0004497 ... A0A0B4ZV78 37917570
    839429 8jua:B (2.00001) BS02 F7Z ? GO:0004497 ... A0A0B4ZV78 37917570
    839430 8jub:A (2.01) BS01 V4I 3.5.1.2 GO:0004359 ... O94925 37849538
    839431 8jub:B (2.01) BS01 V4I 3.5.1.2 GO:0004359 ... O94925 37849538
    839432 8jub:C (2.01) BS01 V4I 3.5.1.2 GO:0004359 ... O94925 37849538
    839433 8jub:D (2.01) BS01 V4I 3.5.1.2 GO:0004359 ... O94925 37849538
    839434 8juc:A (1.54) BS01 V23 2.3.2.23 N/A Q9NPD8 38358126
    839435 8jud:A (1.5) BS01 peptide 3.4.24.23 GO:0004222 ... P09237 37861435
    839436 8jud:A (1.5) BS02 CA 3.4.24.23 GO:0004222 ... P09237 37861435
    839437 8jud:A (1.5) BS03 CA 3.4.24.23 GO:0004222 ... P09237 37861435
    839438 8jud:A (1.5) BS04 ZN 3.4.24.23 GO:0004222 ... P09237 37861435
    839439 8jud:A (1.5) BS05 ZN 3.4.24.23 GO:0004222 ... P09237 37861435
    839440 8jue:A (2.39) BS01 V59 3.5.1.2 GO:0004359 ... O94925 37849538
    839441 8jue:B (2.39) BS01 V59 3.5.1.2 GO:0004359 ... O94925 37849538
    839442 8jue:C (2.39) BS01 V59 3.5.1.2 GO:0004359 ... O94925 37849538
    839443 8jue:D (2.39) BS01 V59 3.5.1.2 GO:0004359 ... O94925 37849538
    839444 8juf:A (1.39) BS01 peptide 3.4.24.23 GO:0004222 ... P09237 37861435
    839445 8juf:A (1.39) BS02 CA 3.4.24.23 GO:0004222 ... P09237 37861435
    839446 8juf:A (1.39) BS03 CA 3.4.24.23 GO:0004222 ... P09237 37861435
    839447 8juf:A (1.39) BS04 ZN 3.4.24.23 GO:0004222 ... P09237 37861435
    839448 8juf:A (1.39) BS05 ZN 3.4.24.23 GO:0004222 ... P09237 37861435
    839449 8jug:A (1.3) BS01 peptide 3.4.24.23 GO:0004222 ... P09237 37861435
    839450 8jug:A (1.3) BS02 CA 3.4.24.23 GO:0004222 ... P09237 37861435
    839451 8jug:A (1.3) BS03 CA 3.4.24.23 GO:0004222 ... P09237 37861435
    839452 8jug:A (1.3) BS04 ZN 3.4.24.23 GO:0004222 ... P09237 37861435
    839453 8jug:A (1.3) BS05 ZN 3.4.24.23 GO:0004222 ... P09237 37861435
    839454 8jui:A (2.2) BS01 PLP N/A GO:0005737 ... Q818J6 39644606
    839455 8juj:A (1.99) BS01 PLP N/A GO:0004069 ... Q816F3 39644606
    839456 8juj:B (1.99) BS01 PLP N/A GO:0004069 ... Q816F3 39644606
    839457 8juj:B (1.99) BS02 PLP N/A GO:0004069 ... Q816F3 39644606
    839458 8jul:A (2.92) BS01 ZN ? GO:0016020 ... Q9NXL6 37932444
    839459 8jul:B (2.92) BS01 ZN ? GO:0016020 ... Q9NXL6 37932444
    839460 8jun:A (2.38) BS01 ZN ? GO:0016020 ... Q9NXL6 37932444
    839461 8jun:B (2.38) BS01 ZN ? GO:0016020 ... Q9NXL6 37932444
    839462 8jup:A (1.98) BS01 ATP 2.7.11.1 GO:0004672 ... Q0JA29 N/A
    839463 8juq:A (2.21) BS01 C8E N/A GO:0009279 ... L0RVU0 N/A
    839464 8juq:A (2.21) BS02 C8E N/A GO:0009279 ... L0RVU0 N/A
    839465 8juq:B (2.21) BS01 C8E N/A GO:0009279 ... L0RVU0 N/A
    839466 8juq:B (2.21) BS02 C8E N/A GO:0009279 ... L0RVU0 N/A
    839467 8juq:C (2.21) BS01 C8E N/A GO:0009279 ... L0RVU0 N/A
    839468 8juq:C (2.21) BS02 C8E N/A GO:0009279 ... L0RVU0 N/A
    839469 8juq:C (2.21) BS03 C8E N/A GO:0009279 ... L0RVU0 N/A
    839470 8juq:G (2.21) BS01 C8E N/A GO:0009279 ... L0RVU0 N/A
    839471 8juq:H (2.21) BS01 C8E N/A GO:0009279 ... L0RVU0 N/A
    839472 8jur:A (2.92) BS01 C8E N/A GO:0009279 ... L0RVU0 N/A
    839473 8jur:A (2.92) BS02 LLL N/A GO:0009279 ... L0RVU0 N/A
    839474 8jur:B (2.92) BS01 C8E N/A GO:0009279 ... L0RVU0 N/A
    839475 8jus:A (1.73) BS01 A2P N/A GO:0004073 ... A0AAF0BGE9 N/A
    839476 8jus:B (1.73) BS01 A2P N/A GO:0004073 ... A0AAF0BGE9 N/A
    839477 8jut:A (4.2) BS01 peptide N/A GO:0005509 ... P98158 38771880
    839478 8jut:A (4.2) BS02 peptide N/A GO:0005509 ... P98158 38771880
    839479 8jut:A (4.2) BS03 peptide N/A GO:0005509 ... P98158 38771880
    839480 8jut:A (4.2) BS04 peptide N/A GO:0005509 ... P98158 38771880
    839481 8jut:A (4.2) BS05 peptide N/A GO:0005509 ... P98158 38771880
    839482 8jut:A (4.2) BS06 peptide N/A GO:0005509 ... P98158 38771880
    839483 8jut:A (4.2) BS07 CA N/A GO:0005509 ... P98158 38771880
    839484 8jut:A (4.2) BS08 CA N/A GO:0005509 ... P98158 38771880
    839485 8jut:A (4.2) BS09 CA N/A GO:0005509 ... P98158 38771880
    839486 8jut:A (4.2) BS10 CA N/A GO:0005509 ... P98158 38771880
    839487 8jut:A (4.2) BS11 CA N/A GO:0005509 ... P98158 38771880
    839488 8jut:A (4.2) BS12 CA N/A GO:0005509 ... P98158 38771880
    839489 8jut:A (4.2) BS13 CA N/A GO:0005509 ... P98158 38771880
    839490 8jut:A (4.2) BS14 CA N/A GO:0005509 ... P98158 38771880
    839491 8jut:A (4.2) BS15 CA N/A GO:0005509 ... P98158 38771880
    839492 8jut:A (4.2) BS16 CA N/A GO:0005509 ... P98158 38771880
    839493 8jut:A (4.2) BS17 CA N/A GO:0005509 ... P98158 38771880
    839494 8jut:A (4.2) BS18 CA N/A GO:0005509 ... P98158 38771880
    839495 8jut:A (4.2) BS19 CA N/A GO:0005509 ... P98158 38771880
    839496 8jut:A (4.2) BS20 CA N/A GO:0005509 ... P98158 38771880
    839497 8jut:A (4.2) BS21 CA N/A GO:0005509 ... P98158 38771880
    839498 8jut:A (4.2) BS22 CA N/A GO:0005509 ... P98158 38771880
    839499 8jut:A (4.2) BS23 CA N/A GO:0005509 ... P98158 38771880
    839500 8jut:A (4.2) BS24 CA N/A GO:0005509 ... P98158 38771880
    839501 8jut:A (4.2) BS25 CA N/A GO:0005509 ... P98158 38771880
    839502 8jut:A (4.2) BS26 CA N/A GO:0005509 ... P98158 38771880
    839503 8jut:A (4.2) BS27 CA N/A GO:0005509 ... P98158 38771880
    839504 8jut:A (4.2) BS28 CA N/A GO:0005509 ... P98158 38771880
    839505 8jut:A (4.2) BS29 CA N/A GO:0005509 ... P98158 38771880
    839506 8jut:A (4.2) BS30 CA N/A GO:0005509 ... P98158 38771880
    839507 8jut:A (4.2) BS31 CA N/A GO:0005509 ... P98158 38771880
    839508 8jut:A (4.2) BS32 CA N/A GO:0005509 ... P98158 38771880
    839509 8jut:A (4.2) BS33 CA N/A GO:0005509 ... P98158 38771880
    839510 8jut:A (4.2) BS34 CA N/A GO:0005509 ... P98158 38771880
    839511 8jut:A (4.2) BS35 CA N/A GO:0005509 ... P98158 38771880
    839512 8jut:A (4.2) BS36 CA N/A GO:0005509 ... P98158 38771880
    839513 8jut:A (4.2) BS37 CA N/A GO:0005509 ... P98158 38771880
    839514 8jut:A (4.2) BS38 CA N/A GO:0005509 ... P98158 38771880
    839515 8jut:A (4.2) BS39 CA N/A GO:0005509 ... P98158 38771880
    839516 8jut:A (4.2) BS40 CA N/A GO:0005509 ... P98158 38771880
    839517 8jut:A (4.2) BS41 CA N/A GO:0005509 ... P98158 38771880
    839518 8jut:A (4.2) BS42 CA N/A GO:0005509 ... P98158 38771880
    839519 8jut:A (4.2) BS43 CA N/A GO:0005509 ... P98158 38771880
    839520 8jut:A (4.2) BS44 CA N/A GO:0005509 ... P98158 38771880
    839521 8jut:A (4.2) BS45 CA N/A GO:0005509 ... P98158 38771880
    839522 8jut:A (4.2) BS46 CA N/A GO:0005509 ... P98158 38771880
    839523 8jut:A (4.2) BS47 CA N/A GO:0005509 ... P98158 38771880
    839524 8jut:A (4.2) BS48 CA N/A GO:0005509 ... P98158 38771880
    839525 8jut:A (4.2) BS49 CA N/A GO:0005509 ... P98158 38771880
    839526 8jut:A (4.2) BS50 CA N/A GO:0005509 ... P98158 38771880
    839527 8jut:B (4.2) BS01 peptide N/A GO:0005509 ... P98158 38771880
    839528 8jut:B (4.2) BS02 peptide N/A GO:0005509 ... P98158 38771880
    839529 8jut:B (4.2) BS03 peptide N/A GO:0005509 ... P98158 38771880
    839530 8jut:B (4.2) BS04 peptide N/A GO:0005509 ... P98158 38771880
    839531 8jut:B (4.2) BS05 peptide N/A GO:0005509 ... P98158 38771880
    839532 8jut:B (4.2) BS06 peptide N/A GO:0005509 ... P98158 38771880
    839533 8jut:B (4.2) BS07 peptide N/A GO:0005509 ... P98158 38771880
    839534 8jut:B (4.2) BS08 CA N/A GO:0005509 ... P98158 38771880
    839535 8jut:B (4.2) BS09 CA N/A GO:0005509 ... P98158 38771880
    839536 8jut:B (4.2) BS10 CA N/A GO:0005509 ... P98158 38771880
    839537 8jut:B (4.2) BS11 CA N/A GO:0005509 ... P98158 38771880
    839538 8jut:B (4.2) BS12 CA N/A GO:0005509 ... P98158 38771880
    839539 8jut:B (4.2) BS13 CA N/A GO:0005509 ... P98158 38771880
    839540 8jut:B (4.2) BS14 CA N/A GO:0005509 ... P98158 38771880
    839541 8jut:B (4.2) BS15 CA N/A GO:0005509 ... P98158 38771880
    839542 8jut:B (4.2) BS16 CA N/A GO:0005509 ... P98158 38771880
    839543 8jut:B (4.2) BS17 CA N/A GO:0005509 ... P98158 38771880
    839544 8jut:B (4.2) BS18 CA N/A GO:0005509 ... P98158 38771880
    839545 8jut:B (4.2) BS19 CA N/A GO:0005509 ... P98158 38771880
    839546 8jut:B (4.2) BS20 CA N/A GO:0005509 ... P98158 38771880
    839547 8jut:B (4.2) BS21 CA N/A GO:0005509 ... P98158 38771880
    839548 8jut:B (4.2) BS22 CA N/A GO:0005509 ... P98158 38771880
    839549 8jut:B (4.2) BS23 CA N/A GO:0005509 ... P98158 38771880
    839550 8jut:B (4.2) BS24 CA N/A GO:0005509 ... P98158 38771880
    839551 8jut:B (4.2) BS25 CA N/A GO:0005509 ... P98158 38771880
    839552 8jut:B (4.2) BS26 CA N/A GO:0005509 ... P98158 38771880
    839553 8jut:B (4.2) BS27 CA N/A GO:0005509 ... P98158 38771880
    839554 8jut:B (4.2) BS28 CA N/A GO:0005509 ... P98158 38771880
    839555 8jut:B (4.2) BS29 CA N/A GO:0005509 ... P98158 38771880
    839556 8jut:B (4.2) BS30 CA N/A GO:0005509 ... P98158 38771880
    839557 8jut:B (4.2) BS31 CA N/A GO:0005509 ... P98158 38771880
    839558 8jut:B (4.2) BS32 CA N/A GO:0005509 ... P98158 38771880
    839559 8jut:B (4.2) BS33 CA N/A GO:0005509 ... P98158 38771880
    839560 8jut:B (4.2) BS34 CA N/A GO:0005509 ... P98158 38771880
    839561 8jut:B (4.2) BS35 CA N/A GO:0005509 ... P98158 38771880
    839562 8jut:B (4.2) BS36 CA N/A GO:0005509 ... P98158 38771880
    839563 8jut:B (4.2) BS37 CA N/A GO:0005509 ... P98158 38771880
    839564 8jut:B (4.2) BS38 CA N/A GO:0005509 ... P98158 38771880
    839565 8jut:B (4.2) BS39 CA N/A GO:0005509 ... P98158 38771880
    839566 8jut:B (4.2) BS40 CA N/A GO:0005509 ... P98158 38771880
    839567 8jut:B (4.2) BS41 CA N/A GO:0005509 ... P98158 38771880
    839568 8jut:B (4.2) BS42 CA N/A GO:0005509 ... P98158 38771880
    839569 8jut:B (4.2) BS43 CA N/A GO:0005509 ... P98158 38771880
    839570 8jut:B (4.2) BS44 CA N/A GO:0005509 ... P98158 38771880
    839571 8jut:B (4.2) BS45 CA N/A GO:0005509 ... P98158 38771880
    839572 8jut:B (4.2) BS46 CA N/A GO:0005509 ... P98158 38771880
    839573 8jut:B (4.2) BS47 CA N/A GO:0005509 ... P98158 38771880
    839574 8jut:B (4.2) BS48 CA N/A GO:0005509 ... P98158 38771880
    839575 8jut:B (4.2) BS49 CA N/A GO:0005509 ... P98158 38771880
    839576 8jut:B (4.2) BS50 CA N/A GO:0005509 ... P98158 38771880
    839577 8jut:B (4.2) BS51 CA N/A GO:0005509 ... P98158 38771880
    839578 8juu:A (3.8) BS01 peptide N/A GO:0005509 ... P98158 38771880
    839579 8juu:A (3.8) BS02 peptide N/A GO:0005509 ... P98158 38771880
    839580 8juu:A (3.8) BS03 peptide N/A GO:0005509 ... P98158 38771880
    839581 8juu:A (3.8) BS04 peptide N/A GO:0005509 ... P98158 38771880
    839582 8juu:A (3.8) BS05 peptide N/A GO:0005509 ... P98158 38771880
    839583 8juu:A (3.8) BS06 peptide N/A GO:0005509 ... P98158 38771880
    839584 8juu:A (3.8) BS07 peptide N/A GO:0005509 ... P98158 38771880
    839585 8juu:A (3.8) BS08 CA N/A GO:0005509 ... P98158 38771880
    839586 8juu:A (3.8) BS09 CA N/A GO:0005509 ... P98158 38771880
    839587 8juu:A (3.8) BS10 CA N/A GO:0005509 ... P98158 38771880
    839588 8juu:A (3.8) BS11 CA N/A GO:0005509 ... P98158 38771880
    839589 8juu:A (3.8) BS12 CA N/A GO:0005509 ... P98158 38771880
    839590 8juu:A (3.8) BS13 CA N/A GO:0005509 ... P98158 38771880
    839591 8juu:A (3.8) BS14 CA N/A GO:0005509 ... P98158 38771880
    839592 8juu:A (3.8) BS15 CA N/A GO:0005509 ... P98158 38771880
    839593 8juu:A (3.8) BS16 CA N/A GO:0005509 ... P98158 38771880
    839594 8juu:A (3.8) BS17 CA N/A GO:0005509 ... P98158 38771880
    839595 8juu:A (3.8) BS18 CA N/A GO:0005509 ... P98158 38771880
    839596 8juu:A (3.8) BS19 CA N/A GO:0005509 ... P98158 38771880
    839597 8juu:A (3.8) BS20 CA N/A GO:0005509 ... P98158 38771880
    839598 8juu:A (3.8) BS21 CA N/A GO:0005509 ... P98158 38771880
    839599 8juu:A (3.8) BS22 CA N/A GO:0005509 ... P98158 38771880
    839600 8juu:A (3.8) BS23 CA N/A GO:0005509 ... P98158 38771880

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).