SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    840201 8j9x:A (3.0) BS01 dna 5.6.2.2 GO:0000166 ... Q00942 38418525
    840202 8j9x:A (3.0) BS02 dna 5.6.2.2 GO:0000166 ... Q00942 38418525
    840203 8j9x:A (3.0) BS03 ASW 5.6.2.2 GO:0000166 ... Q00942 38418525
    840204 8j9x:B (3.0) BS01 dna 5.6.2.2 GO:0000166 ... Q00942 38418525
    840205 8j9x:B (3.0) BS02 dna 5.6.2.2 GO:0000166 ... Q00942 38418525
    840206 8j9x:B (3.0) BS03 MG 5.6.2.2 GO:0000166 ... Q00942 38418525
    840207 8ja0:A (3.52) BS01 rna 3.1.-.- GO:0003676 ... C9X1G5 37587688
    840208 8ja0:D (3.52) BS01 rna ? N/A A0A377JKY9 37587688
    840209 8ja1:A (1.14) BS01 ANP 5.6.2.2 N/A Q00942 38418525
    840210 8ja2:A (1.73) BS01 ANP 5.6.2.2 N/A Q00942 38418525
    840211 8ja3:A (3.94) BS01 peptide ? GO:0007165 ... P29066 38175886
    840212 8ja3:B (3.94) BS01 peptide ? GO:0007165 ... P29066 38175886
    840213 8ja4:A (2.04) BS01 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    840214 8ja4:A (2.04) BS02 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    840215 8ja4:A (2.04) BS03 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    840216 8ja4:A (2.04) BS04 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    840217 8ja4:A (2.04) BS05 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    840218 8ja4:A (2.04) BS06 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    840219 8ja5:A (2.79) BS01 FUC ? GO:0019031 ... Q9IH62 40877258
    840220 8ja5:C (2.79) BS01 MAN N/A N/A N/A 40877258
    840221 8ja6:A (2.0) BS01 BEM 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    840222 8ja6:A (2.0) BS02 BEM 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    840223 8ja6:A (2.0) BS03 BEM 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    840224 8ja6:A (2.0) BS04 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    840225 8ja6:A (2.0) BS05 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    840226 8ja6:A (2.0) BS06 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    840227 8ja6:A (2.0) BS07 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    840228 8ja6:A (2.0) BS08 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    840229 8ja6:A (2.0) BS09 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    840230 8ja7:E (3.02) BS01 GLC ? N/A P9WGU9 37603751
    840231 8ja7:E (3.02) BS02 GLC ? N/A P9WGU9 37603751
    840232 8ja8:A (1.6) BS01 GLC ? N/A P9WGU9 37603751
    840233 8ja8:A (1.6) BS02 GLC ? N/A P9WGU9 37603751
    840234 8ja9:A (2.1) BS01 TY6 ? N/A P9WGU9 37603751
    840235 8ja9:A (2.1) BS02 GLC ? N/A P9WGU9 37603751
    840236 8jaa:A (1.7) BS01 TY6 ? N/A P9WGU9 37603751
    840237 8jaa:A (1.7) BS02 TY6 ? N/A P9WGU9 37603751
    840238 8jab:A (1.7) BS01 U0X ? N/A P9WGU9 37603751
    840239 8jac:A (2.1) BS01 W4Z ? N/A P9WGU9 37603751
    840240 8jac:A (2.1) BS02 GLC ? N/A P9WGU9 37603751
    840241 8jad:A (2.3) BS01 YYD ? N/A P9WGU9 37603751
    840242 8jad:A (2.3) BS02 GLC ? N/A P9WGU9 37603751
    840243 8jaf:A (3.1) BS01 peptide ? GO:0007165 ... P17870 38175886
    840244 8jai:A (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    840245 8jai:B (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    840246 8jai:B (2.56) BS02 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    840247 8jai:D (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    840248 8jai:E (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    840249 8jai:E (2.56) BS02 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    840250 8jai:F (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    840251 8jai:G (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    840252 8jai:H (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    840253 8jai:I (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    840254 8jai:L (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    840255 8jai:M (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    840256 8jai:P (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    840257 8jai:P (2.56) BS02 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    840258 8jai:Q (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    840259 8jai:S (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    840260 8jai:S (2.56) BS02 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    840261 8jai:W (2.56) BS01 FE 1.16.3.1 GO:0004322 ... P02794 37870198
    840262 8jal:A (3.3) BS01 peptide ? GO:0003777 ... Q92624 37844242
    840263 8jal:B (3.3) BS01 peptide ? GO:0003777 ... Q92624 37844242
    840264 8jal:B (3.3) BS02 ZN ? GO:0003777 ... Q92624 37844242
    840265 8jao:A (2.194) BS01 ZN 3.5.2.6 GO:0008270 ... Q79MP6 37791640
    840266 8jao:A (2.194) BS02 ZN 3.5.2.6 GO:0008270 ... Q79MP6 37791640
    840267 8jao:A (2.194) BS03 5ZX 3.5.2.6 GO:0008270 ... Q79MP6 37791640
    840268 8jao:B (2.194) BS01 ZN 3.5.2.6 GO:0008270 ... Q79MP6 37791640
    840269 8jao:B (2.194) BS02 ZN 3.5.2.6 GO:0008270 ... Q79MP6 37791640
    840270 8jao:B (2.194) BS03 5ZX 3.5.2.6 GO:0008270 ... Q79MP6 37791640
    840271 8jaq:A (3.26) BS01 peptide ? GO:0003777 ... Q92624 37844242
    840272 8jaq:A (3.26) BS02 ZN ? GO:0003777 ... Q92624 37844242
    840273 8jaq:B (3.26) BS01 peptide ? GO:0003777 ... Q92624 37844242
    840274 8jaq:B (3.26) BS02 ZN ? GO:0003777 ... Q92624 37844242
    840275 8jaq:J (3.26) BS01 peptide ? GO:0003777 ... Q92624 37844242
    840276 8jaq:J (3.26) BS02 ZN ? GO:0003777 ... Q92624 37844242
    840277 8jaq:K (3.26) BS01 peptide ? GO:0003777 ... Q92624 37844242
    840278 8jaq:K (3.26) BS02 ZN ? GO:0003777 ... Q92624 37844242
    840279 8jaq:R (3.26) BS01 ZN 2.3.2.27
    2.3.2.32    		 GO:0000082 ... P62877 37844242
    840280 8jaq:R (3.26) BS02 ZN 2.3.2.27
    2.3.2.32    		 GO:0000082 ... P62877 37844242
    840281 8jaq:R (3.26) BS03 ZN 2.3.2.27
    2.3.2.32    		 GO:0000082 ... P62877 37844242
    840282 8jaq:V (3.26) BS01 ZN 2.3.2.27
    2.3.2.32    		 GO:0000082 ... P62877 37844242
    840283 8jaq:V (3.26) BS02 ZN 2.3.2.27
    2.3.2.32    		 GO:0000082 ... P62877 37844242
    840284 8jaq:V (3.26) BS03 ZN 2.3.2.27
    2.3.2.32    		 GO:0000082 ... P62877 37844242
    840285 8jar:A (3.3) BS01 peptide ? GO:0003777 ... Q92624 37844242
    840286 8jar:B (3.3) BS01 peptide ? GO:0003777 ... Q92624 37844242
    840287 8jar:B (3.3) BS02 ZN ? GO:0003777 ... Q92624 37844242
    840288 8jas:A (3.54) BS01 peptide ? GO:0003777 ... Q92624 37844242
    840289 8jas:B (3.54) BS01 peptide ? GO:0003777 ... Q92624 37844242
    840290 8jas:B (3.54) BS02 ZN ? GO:0003777 ... Q92624 37844242
    840291 8jas:J (3.54) BS01 ZN ? GO:0003777 ... Q92624 37844242
    840292 8jas:K (3.54) BS01 peptide ? GO:0003777 ... Q92624 37844242
    840293 8jas:K (3.54) BS02 ZN ? GO:0003777 ... Q92624 37844242
    840294 8jas:R (3.54) BS01 ZN 2.3.2.27
    2.3.2.32    		 GO:0000082 ... P62877 37844242
    840295 8jas:R (3.54) BS02 ZN 2.3.2.27
    2.3.2.32    		 GO:0000082 ... P62877 37844242
    840296 8jas:R (3.54) BS03 ZN 2.3.2.27
    2.3.2.32    		 GO:0000082 ... P62877 37844242
    840297 8jas:V (3.54) BS01 ZN 2.3.2.27
    2.3.2.32    		 GO:0000082 ... P62877 37844242
    840298 8jas:V (3.54) BS02 ZN 2.3.2.27
    2.3.2.32    		 GO:0000082 ... P62877 37844242
    840299 8jas:V (3.54) BS03 ZN 2.3.2.27
    2.3.2.32    		 GO:0000082 ... P62877 37844242
    840300 8jat:A (3.2) BS01 NDP 1.1.1.102 GO:0006666 ... P0CR36 37285720
    840301 8jau:A (3.22) BS01 peptide ? GO:0003777 ... Q92624 37844242
    840302 8jau:B (3.22) BS01 peptide ? GO:0003777 ... Q92624 37844242
    840303 8jau:B (3.22) BS02 ZN ? GO:0003777 ... Q92624 37844242
    840304 8jav:A (3.44) BS01 peptide ? GO:0003777 ... Q92624 37844242
    840305 8jav:A (3.44) BS02 ZN ? GO:0003777 ... Q92624 37844242
    840306 8jav:B (3.44) BS01 peptide ? GO:0003777 ... Q92624 37844242
    840307 8jav:J (3.44) BS01 peptide ? GO:0003777 ... Q92624 37844242
    840308 8jav:K (3.44) BS01 peptide ? GO:0003777 ... Q92624 37844242
    840309 8jav:R (3.44) BS01 ZN 2.3.2.27
    2.3.2.32    		 GO:0000082 ... P62877 37844242
    840310 8jav:R (3.44) BS02 ZN 2.3.2.27
    2.3.2.32    		 GO:0000082 ... P62877 37844242
    840311 8jav:R (3.44) BS03 ZN 2.3.2.27
    2.3.2.32    		 GO:0000082 ... P62877 37844242
    840312 8jav:V (3.44) BS01 ZN 2.3.2.27
    2.3.2.32    		 GO:0000082 ... P62877 37844242
    840313 8jav:V (3.44) BS02 ZN 2.3.2.27
    2.3.2.32    		 GO:0000082 ... P62877 37844242
    840314 8jav:V (3.44) BS03 ZN 2.3.2.27
    2.3.2.32    		 GO:0000082 ... P62877 37844242
    840315 8jaw:A (2.51) BS01 BTI 6.4.1.4 GO:0004075 ... Q96RQ3 39223421
    840316 8jaw:B (2.51) BS01 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    840317 8jaw:C (2.51) BS01 BTI 6.4.1.4 GO:0004075 ... Q96RQ3 39223421
    840318 8jaw:D (2.51) BS01 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    840319 8jaw:E (2.51) BS01 BTI 6.4.1.4 GO:0004075 ... Q96RQ3 39223421
    840320 8jaw:F (2.51) BS01 BTI 6.4.1.4 GO:0004075 ... Q96RQ3 39223421
    840321 8jaw:G (2.51) BS01 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    840322 8jaw:H (2.51) BS01 BTI 6.4.1.4 GO:0004075 ... Q96RQ3 39223421
    840323 8jaw:I (2.51) BS01 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    840324 8jaw:I (2.51) BS02 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    840325 8jaw:J (2.51) BS01 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    840326 8jaw:K (2.51) BS01 BTI 6.4.1.4 GO:0004075 ... Q96RQ3 39223421
    840327 8jaw:L (2.51) BS01 BTI 6.4.1.4 GO:0004485 ... Q9HCC0 39223421
    840328 8jax:A (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840329 8jax:A (3.27) BS02 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840330 8jax:B (3.27) BS01 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840331 8jax:B (3.27) BS02 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840332 8jax:C (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840333 8jax:C (3.27) BS02 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840334 8jax:D (3.27) BS01 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840335 8jax:D (3.27) BS02 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840336 8jax:E (3.27) BS01 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840337 8jax:E (3.27) BS02 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840338 8jax:F (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840339 8jax:F (3.27) BS02 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840340 8jax:G (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840341 8jax:G (3.27) BS02 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840342 8jax:H (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840343 8jax:H (3.27) BS02 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840344 8jax:I (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840345 8jax:I (3.27) BS02 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840346 8jax:J (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840347 8jax:J (3.27) BS02 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840348 8jax:K (3.27) BS01 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840349 8jax:K (3.27) BS02 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840350 8jax:L (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840351 8jax:L (3.27) BS02 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840352 8jax:M (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840353 8jax:M (3.27) BS02 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840354 8jax:N (3.27) BS01 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840355 8jax:N (3.27) BS02 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840356 8jax:O (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840357 8jax:O (3.27) BS02 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840358 8jax:P (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840359 8jax:P (3.27) BS02 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840360 8jax:Q (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840361 8jax:Q (3.27) BS02 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840362 8jax:R (3.27) BS01 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840363 8jax:R (3.27) BS02 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840364 8jax:S (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840365 8jax:S (3.27) BS02 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840366 8jax:T (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840367 8jax:T (3.27) BS02 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840368 8jax:U (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840369 8jax:U (3.27) BS02 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840370 8jax:V (3.27) BS01 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840371 8jax:V (3.27) BS02 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840372 8jax:W (3.27) BS01 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840373 8jax:W (3.27) BS02 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840374 8jax:X (3.27) BS01 HEM 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840375 8jax:X (3.27) BS02 FE2 1.16.3.1 GO:0004322 ... Q9S2N0 37529551
    840376 8jay:A (4.2) BS01 rna ? GO:0003676 ... A0A1I7NFD7 37932527
    840377 8jay:A (4.2) BS02 dna ? GO:0003676 ... A0A1I7NFD7 37932527
    840378 8jay:A (4.2) BS03 MG ? GO:0003676 ... A0A1I7NFD7 37932527
    840379 8jay:B (4.2) BS01 rna ? GO:0007165 ... A0A1I7NFG5 37932527
    840380 8jay:B (4.2) BS02 dna ? GO:0007165 ... A0A1I7NFG5 37932527
    840381 8jay:C (4.2) BS01 rna ? GO:0003676 ... A0A1I7NFD7 37932527
    840382 8jay:C (4.2) BS02 dna ? GO:0003676 ... A0A1I7NFD7 37932527
    840383 8jay:D (4.2) BS01 rna ? GO:0007165 ... A0A1I7NFG5 37932527
    840384 8jay:D (4.2) BS02 dna ? GO:0007165 ... A0A1I7NFG5 37932527
    840385 8jay:I (4.2) BS01 rna ? GO:0003676 ... A0A1I7NFD7 37932527
    840386 8jay:I (4.2) BS02 dna ? GO:0003676 ... A0A1I7NFD7 37932527
    840387 8jay:J (4.2) BS01 rna ? GO:0007165 ... A0A1I7NFG5 37932527
    840388 8jay:J (4.2) BS02 dna ? GO:0007165 ... A0A1I7NFG5 37932527
    840389 8jay:M (4.2) BS01 rna ? GO:0003676 ... A0A1I7NFD7 37932527
    840390 8jay:M (4.2) BS02 dna ? GO:0003676 ... A0A1I7NFD7 37932527
    840391 8jay:M (4.2) BS03 MG ? GO:0003676 ... A0A1I7NFD7 37932527
    840392 8jay:N (4.2) BS01 rna ? GO:0007165 ... A0A1I7NFG5 37932527
    840393 8jay:N (4.2) BS02 dna ? GO:0007165 ... A0A1I7NFG5 37932527
    840394 8jaz:A (1.82) BS01 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    840395 8jaz:A (1.82) BS02 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    840396 8jaz:A (1.82) BS03 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    840397 8jaz:A (1.82) BS04 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    840398 8jaz:A (1.82) BS05 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    840399 8jaz:A (1.82) BS06 CA 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    840400 8jaz:B (1.82) BS01 BEM 5.1.3.37 GO:0005509 ... A0A0C4WKK2 38649293
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).