SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    841401 8jdm:r (2.67) BS01 rna ? GO:0002181 ... P62987 37992713
    841402 8jdm:r (2.67) BS02 ZN ? GO:0002181 ... P62987 37992713
    841403 8jdm:t (2.67) BS01 rna ? GO:0002181 ... P83881 37992713
    841404 8jdm:t (2.67) BS02 rna ? GO:0002181 ... P83881 37992713
    841405 8jdm:t (2.67) BS03 ZN ? GO:0002181 ... P83881 37992713
    841406 8jdm:u (2.67) BS01 rna ? GO:0002181 ... P61513 37992713
    841407 8jdm:u (2.67) BS02 ZN ? GO:0002181 ... P61513 37992713
    841408 8jdm:v (2.67) BS01 rna ? GO:0002181 ... P46779 37992713
    841409 8jdm:x (2.67) BS01 rna ? GO:0000028 ... P08865 37992713
    841410 8jdm:y (2.67) BS01 rna ? GO:0002181 ... P61247 37992713
    841411 8jdm:z (2.67) BS01 rna ? GO:0002181 ... P15880 37992713
    841412 8jdn:A (1.56) BS01 FAD 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841413 8jdn:A (1.56) BS02 UE3 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841414 8jdo:A (1.72) BS01 7N6 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841415 8jdo:A (1.72) BS02 FAD 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841416 8jdp:A (1.6) BS01 FAD 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841417 8jdp:A (1.6) BS02 VAD 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841418 8jdq:A (1.39) BS01 FAD 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841419 8jdq:A (1.39) BS02 2RH 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841420 8jdr:A (1.64) BS01 FAD 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841421 8jdr:A (1.64) BS02 UEI 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841422 8jds:A (1.636) BS01 FAD 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841423 8jds:A (1.636) BS02 MN 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841424 8jds:A (1.636) BS03 PYR 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841425 8jdt:A (1.55) BS01 FAD 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841426 8jdt:A (1.55) BS02 2KT 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841427 8jdt:A (1.55) BS03 MN 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841428 8jdu:A (1.67) BS01 FAD 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841429 8jdu:A (1.67) BS02 MN 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841430 8jdu:A (1.67) BS03 69O 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841431 8jdv:A (1.96) BS01 FAD 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841432 8jdv:A (1.96) BS02 MN 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841433 8jdv:A (1.96) BS03 7N5 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841434 8jdw:A (2.3) BS01 ALA 2.1.4.1 GO:0005515 ... P50440 9915841
    841435 8jdx:A (1.79) BS01 FAD 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841436 8jdx:A (1.79) BS02 MN 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841437 8jdx:A (1.79) BS03 KIV 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841438 8jdy:A (1.59) BS01 FAD 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841439 8jdy:A (1.59) BS02 MN 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841440 8jdy:A (1.59) BS03 COI 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841441 8jdz:A (1.56) BS01 FAD 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841442 8jdz:A (1.56) BS02 MN 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841443 8jdz:A (1.56) BS03 1QQ 1.1.2.4 GO:0003824 ... Q7TNG8 37863926
    841444 8je0:A (2.9) BS01 ZN ? GO:0016787 ... A0A9E8ZAQ2 N/A
    841445 8je0:B (2.9) BS01 ZN ? GO:0016787 ... A0A9E8ZAQ2 N/A
    841446 8je0:C (2.9) BS01 ZN ? GO:0016787 ... A0A9E8ZAQ2 N/A
    841447 8je0:D (2.9) BS01 ZN ? GO:0016787 ... A0A9E8ZAQ2 N/A
    841448 8je1:A (3.95) BS01 peptide ? GO:0000082 ... Q13617 38360992
    841449 8je1:I (3.95) BS01 ZN ? GO:0000151 ... Q9UK73 38360992
    841450 8je2:D (3.63) BS01 peptide ? GO:0000151 ... Q9UK73 38360992
    841451 8je2:D (3.63) BS02 ZN ? GO:0000151 ... Q9UK73 38360992
    841452 8je4:A (2.19) BS01 PIS ? N/A A0ACD6BAH7 37877712
    841453 8je4:B (2.19) BS01 PIS ? N/A A0ACD6BAH7 37877712
    841454 8je5:A (2.57) BS01 HFG N/A GO:0000166 ... A0A182M1F8 40048639
    841455 8je5:A (2.57) BS02 ZN N/A GO:0000166 ... A0A182M1F8 40048639
    841456 8je5:B (2.57) BS01 HFG N/A GO:0000166 ... A0A182M1F8 40048639
    841457 8je5:B (2.57) BS02 ZN N/A GO:0000166 ... A0A182M1F8 40048639
    841458 8je6:A (2.883) BS01 ANP N/A GO:0000166 ... A0A182M1F8 40048639
    841459 8je6:A (2.883) BS02 HFG N/A GO:0000166 ... A0A182M1F8 40048639
    841460 8je6:A (2.883) BS03 ZN N/A GO:0000166 ... A0A182M1F8 40048639
    841461 8je6:B (2.883) BS01 ANP N/A GO:0000166 ... A0A182M1F8 40048639
    841462 8je6:B (2.883) BS02 HFG N/A GO:0000166 ... A0A182M1F8 40048639
    841463 8je6:B (2.883) BS03 ZN N/A GO:0000166 ... A0A182M1F8 40048639
    841464 8je7:A (2.14) BS01 ZN N/A GO:0000166 ... A0A182M1F8 40048639
    841465 8je7:A (2.14) BS02 HFG N/A GO:0000166 ... A0A182M1F8 40048639
    841466 8je7:A (2.14) BS03 JE6 N/A GO:0000166 ... A0A182M1F8 40048639
    841467 8je7:B (2.14) BS01 ZN N/A GO:0000166 ... A0A182M1F8 40048639
    841468 8je7:B (2.14) BS02 HFG N/A GO:0000166 ... A0A182M1F8 40048639
    841469 8je7:B (2.14) BS03 JE6 N/A GO:0000166 ... A0A182M1F8 40048639
    841470 8je9:A (1.0) BS01 MAN ? N/A K1QRB6 37793172
    841471 8je9:A (1.0) BS02 MAN ? N/A K1QRB6 37793172
    841472 8je9:B (1.0) BS01 MAN ? N/A K1QRB6 37793172
    841473 8je9:B (1.0) BS02 MAN ? N/A K1QRB6 37793172
    841474 8je9:D (1.0) BS01 MAN ? N/A K1QRB6 37793172
    841475 8jea:A (0.97) BS01 MAN ? N/A K1QRB6 37793172
    841476 8jea:A (0.97) BS02 MAN ? N/A K1QRB6 37793172
    841477 8jea:B (0.97) BS01 MAN ? N/A K1QRB6 37793172
    841478 8jea:B (0.97) BS02 MAN ? N/A K1QRB6 37793172
    841479 8jea:D (0.97) BS01 MAN ? N/A K1QRB6 37793172
    841480 8jeb:A (1.3) BS01 MAN ? N/A K1QRB6 37793172
    841481 8jeb:A (1.3) BS02 MAN ? N/A K1QRB6 37793172
    841482 8jeb:B (1.3) BS01 MAN ? N/A K1QRB6 37793172
    841483 8jeb:B (1.3) BS02 MAN ? N/A K1QRB6 37793172
    841484 8jee:A (2.96) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 N/A
    841485 8jee:A (2.96) BS02 U6X 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 N/A
    841486 8jef:A (2.96) BS01 3HO N/A GO:0004930 ... P49019 39427321
    841487 8jei:A (2.73) BS01 CW3 N/A GO:0004930 ... P49019 39427321
    841488 8jej:A (2.5) BS01 FAD 1.1.5.14 GO:0005886 ... M1VMF7 N/A
    841489 8jej:A (2.5) BS02 F3S 1.1.5.14 GO:0005886 ... M1VMF7 N/A
    841490 8jej:C (2.5) BS01 HEC ? GO:0005506 ... M1V1V5 N/A
    841491 8jej:C (2.5) BS02 HEC ? GO:0005506 ... M1V1V5 N/A
    841492 8jej:C (2.5) BS03 HEC ? GO:0005506 ... M1V1V5 N/A
    841493 8jej:C (2.5) BS04 U10 ? GO:0005506 ... M1V1V5 N/A
    841494 8jek:A (2.7) BS01 FAD 1.1.5.14 GO:0005886 ... M1VMF7 N/A
    841495 8jek:A (2.7) BS02 F3S 1.1.5.14 GO:0005886 ... M1VMF7 N/A
    841496 8jek:C (2.7) BS01 HEC ? GO:0005506 ... M1V1V5 N/A
    841497 8jek:C (2.7) BS02 HEC ? GO:0005506 ... M1V1V5 N/A
    841498 8jek:C (2.7) BS03 HEC ? GO:0005506 ... M1V1V5 N/A
    841499 8jek:C (2.7) BS04 U10 ? GO:0005506 ... M1V1V5 N/A
    841500 8jem:A (3.23) BS01 ASW 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841501 8jem:A (3.23) BS02 PGT 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841502 8jem:A (3.23) BS03 PGT 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841503 8jem:B (3.23) BS01 PGT 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841504 8jem:B (3.23) BS02 ASW 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841505 8jem:B (3.23) BS03 PGT 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841506 8jem:B (3.23) BS04 PGT 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841507 8jem:C (3.23) BS01 ASW 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841508 8jem:C (3.23) BS02 PGT 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841509 8jem:C (3.23) BS03 PGT 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841510 8jem:D (3.23) BS01 PGT 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841511 8jem:D (3.23) BS02 ASW 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841512 8jem:D (3.23) BS03 PGT 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841513 8jem:D (3.23) BS04 PGT 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841514 8jer:R (3.45) BS01 OJX ? GO:0001781 ... P08173
    Q8TDS4
    38431681
    841515 8jes:A (3.42) BS01 PGT 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841516 8jes:A (3.42) BS02 PGT 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841517 8jes:B (3.42) BS01 PGT 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841518 8jes:C (3.42) BS01 PGT 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841519 8jes:C (3.42) BS02 PGT 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841520 8jes:D (3.42) BS01 PGT 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841521 8jev:A (3.06) BS01 CL N/A GO:0005216 ... P51791 39107281
    841522 8jev:A (3.06) BS02 CL N/A GO:0005216 ... P51791 39107281
    841523 8jev:B (3.06) BS01 CL N/A GO:0005216 ... P51791 39107281
    841524 8jev:B (3.06) BS02 CL N/A GO:0005216 ... P51791 39107281
    841525 8jew:A (2.49) BS01 ASC ? GO:0005515 ... Q9UHI7 38956111
    841526 8jew:A (2.49) BS02 NA ? GO:0005515 ... Q9UHI7 38956111
    841527 8jew:A (2.49) BS03 NA ? GO:0005515 ... Q9UHI7 38956111
    841528 8jew:A (2.49) BS04 LBN ? GO:0005515 ... Q9UHI7 38956111
    841529 8jew:A (2.49) BS05 AV0 ? GO:0005515 ... Q9UHI7 38956111
    841530 8jew:A (2.49) BS06 CLR ? GO:0005515 ... Q9UHI7 38956111
    841531 8jew:A (2.49) BS07 CLR ? GO:0005515 ... Q9UHI7 38956111
    841532 8jez:A (2.6) BS01 LBN N/A GO:0005515 ... Q9UHI7 38956111
    841533 8jez:A (2.6) BS02 AV0 N/A GO:0005515 ... Q9UHI7 38956111
    841534 8jez:A (2.6) BS03 CLR N/A GO:0005515 ... Q9UHI7 38956111
    841535 8jez:A (2.6) BS04 CLR N/A GO:0005515 ... Q9UHI7 38956111
    841536 8jf1:A (2.85) BS01 AV0 ? GO:0005515 ... Q9UHI7 38956111
    841537 8jf1:A (2.85) BS02 AV0 ? GO:0005515 ... Q9UHI7 38956111
    841538 8jf1:A (2.85) BS03 AV0 ? GO:0005515 ... Q9UHI7 38956111
    841539 8jf1:A (2.85) BS04 Y01 ? GO:0005515 ... Q9UHI7 38956111
    841540 8jf1:A (2.85) BS05 Y01 ? GO:0005515 ... Q9UHI7 38956111
    841541 8jf1:A (2.85) BS06 CLR ? GO:0005515 ... Q9UHI7 38956111
    841542 8jf2:A (3.5) BS01 PGT 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841543 8jf2:A (3.5) BS02 PGT 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841544 8jf2:B (3.5) BS01 PGT 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841545 8jf2:C (3.5) BS01 PGT 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841546 8jf2:D (3.5) BS01 PGT 2.3.1.- GO:0005515 ... Q5M4V4 38649359
    841547 8jf3:A (2.84648) BS01 C0N 2.7.10.2 GO:0004672 ... P12931 38248139
    841548 8jf3:B (2.84648) BS01 C0N 2.7.10.2 GO:0004672 ... P12931 38248139
    841549 8jf4:A (2.89288) BS01 C0N 2.7.11.1 GO:0000212 ... O14965 38248139
    841550 8jf5:A (3.2) BS01 FAD 1.14.99.66 GO:0005634 ... O60341 N/A
    841551 8jf5:A (3.2) BS02 UEU 1.14.99.66 GO:0005634 ... O60341 N/A
    841552 8jfa:A (2.55) BS01 NAP N/A GO:0004316 ... N/A 37779101
    841553 8jfa:B (2.55) BS01 NAP N/A GO:0004316 ... N/A 37779101
    841554 8jfa:C (2.55) BS01 NAP N/A GO:0004316 ... N/A 37779101
    841555 8jfa:D (2.55) BS01 NAP N/A GO:0004316 ... N/A 37779101
    841556 8jfa:E (2.55) BS01 NAP N/A GO:0004316 ... N/A 37779101
    841557 8jfa:F (2.55) BS01 NAP N/A GO:0004316 ... N/A 37779101
    841558 8jfb:A (2.65) BS01 U86 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841559 8jfb:A (2.65) BS02 NDP 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841560 8jfb:A (2.65) BS03 UMP 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841561 8jfb:A (2.65) BS04 UMP 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841562 8jfb:B (2.65) BS01 UMP 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841563 8jfb:B (2.65) BS02 NDP 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841564 8jfb:B (2.65) BS03 U86 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841565 8jfb:B (2.65) BS04 UMP 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841566 8jfc:A (2.3) BS01 NDP 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841567 8jfc:A (2.3) BS02 UMP 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841568 8jfc:A (2.3) BS03 U8I 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841569 8jfc:A (2.3) BS04 UMP 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841570 8jfc:B (2.3) BS01 UMP 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841571 8jfc:B (2.3) BS02 UMP 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841572 8jfc:B (2.3) BS03 U8I 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841573 8jfc:B (2.3) BS04 NDP 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841574 8jfd:A (2.3) BS01 NDP 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841575 8jfd:A (2.3) BS02 UMP 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841576 8jfd:A (2.3) BS03 U8Y 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841577 8jfd:A (2.3) BS04 UMP 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841578 8jfd:B (2.3) BS01 UMP 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841579 8jfd:B (2.3) BS02 NDP 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841580 8jfd:B (2.3) BS03 UMP 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841581 8jfd:B (2.3) BS04 U8Y 1.5.1.3
    2.1.1.45
    GO:0004146 ... D9N170 37731689
    841582 8jff:A (2.89) BS01 EPE ? GO:0000976 ... A0A454A0X5 37805153
    841583 8jff:A (2.89) BS02 EPE ? GO:0000976 ... A0A454A0X5 37805153
    841584 8jff:B (2.89) BS01 EPE ? GO:0000976 ... A0A454A0X5 37805153
    841585 8jfg:A (2.83) BS01 NAP N/A GO:0004316 ... N/A 37779101
    841586 8jfg:A (2.83) BS02 UHC N/A GO:0004316 ... N/A 37779101
    841587 8jfg:B (2.83) BS01 NAP N/A GO:0004316 ... N/A 37779101
    841588 8jfg:C (2.83) BS01 NAP N/A GO:0004316 ... N/A 37779101
    841589 8jfg:D (2.83) BS01 NAP N/A GO:0004316 ... N/A 37779101
    841590 8jfg:E (2.83) BS01 NAP N/A GO:0004316 ... N/A 37779101
    841591 8jfg:F (2.83) BS01 NAP N/A GO:0004316 ... N/A 37779101
    841592 8jfh:A (1.8) BS01 NAP N/A GO:0004316 ... N/A 37779101
    841593 8jfh:B (1.8) BS01 NAP N/A GO:0004316 ... N/A 37779101
    841594 8jfh:D (1.8) BS01 NAP N/A GO:0004316 ... N/A 37779101
    841595 8jfh:D (1.8) BS02 PN7 N/A GO:0004316 ... N/A 37779101
    841596 8jfh:E (1.8) BS01 UHC ? GO:0000035 ... Q5EDC8 37779101
    841597 8jfi:A (2.38) BS01 NAP N/A GO:0004316 ... N/A 37779101
    841598 8jfi:A (2.38) BS02 UHC N/A GO:0004316 ... N/A 37779101
    841599 8jfi:B (2.38) BS01 NAP N/A GO:0004316 ... N/A 37779101
    841600 8jfi:C (2.38) BS01 peptide N/A GO:0004316 ... N/A 37779101

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).