SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4199 4200 4201 4202 4203 4204 4205 4206 4207 4208 4209 4210 4211 4212 4213 4214 4215 4216 4217 4218 4219 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    841601 8jfi:C (2.38) BS02 NAP N/A GO:0004316 ... N/A 37779101
    841602 8jfi:D (2.38) BS01 peptide N/A GO:0004316 ... N/A 37779101
    841603 8jfi:D (2.38) BS02 NAP N/A GO:0004316 ... N/A 37779101
    841604 8jfi:E (2.38) BS01 peptide N/A GO:0004316 ... N/A 37779101
    841605 8jfi:E (2.38) BS02 NAP N/A GO:0004316 ... N/A 37779101
    841606 8jfi:F (2.38) BS01 NAP N/A GO:0004316 ... N/A 37779101
    841607 8jfk:A (2.9) BS01 FAR ? GO:0004689 ... P46020 38548794
    841608 8jfk:B (2.9) BS01 FAR ? GO:0005515 ... Q93100 38548794
    841609 8jfk:B (2.9) BS02 FAR ? GO:0005515 ... Q93100 38548794
    841610 8jfk:E (2.9) BS01 FAR ? GO:0004689 ... P46020 38548794
    841611 8jfk:F (2.9) BS01 FAR ? GO:0005515 ... Q93100 38548794
    841612 8jfk:F (2.9) BS02 FAR ? GO:0005515 ... Q93100 38548794
    841613 8jfk:I (2.9) BS01 FAR ? GO:0004689 ... P46020 38548794
    841614 8jfk:J (2.9) BS01 FAR ? GO:0005515 ... Q93100 38548794
    841615 8jfk:J (2.9) BS02 FAR ? GO:0005515 ... Q93100 38548794
    841616 8jfk:M (2.9) BS01 FAR ? GO:0004689 ... P46020 38548794
    841617 8jfk:N (2.9) BS01 FAR ? GO:0005515 ... Q93100 38548794
    841618 8jfk:N (2.9) BS02 FAR ? GO:0005515 ... Q93100 38548794
    841619 8jfl:A (2.9) BS01 FAR ? GO:0004689 ... P46020 38548794
    841620 8jfl:B (2.9) BS01 FAR ? GO:0005515 ... Q93100 38548794
    841621 8jfl:B (2.9) BS02 ADP ? GO:0005515 ... Q93100 38548794
    841622 8jfl:B (2.9) BS03 FAR ? GO:0005515 ... Q93100 38548794
    841623 8jfl:E (2.9) BS01 FAR ? GO:0004689 ... P46020 38548794
    841624 8jfl:F (2.9) BS01 FAR ? GO:0005515 ... Q93100 38548794
    841625 8jfl:F (2.9) BS02 ADP ? GO:0005515 ... Q93100 38548794
    841626 8jfl:F (2.9) BS03 FAR ? GO:0005515 ... Q93100 38548794
    841627 8jfl:I (2.9) BS01 FAR ? GO:0004689 ... P46020 38548794
    841628 8jfl:J (2.9) BS01 FAR ? GO:0005515 ... Q93100 38548794
    841629 8jfl:J (2.9) BS02 FAR ? GO:0005515 ... Q93100 38548794
    841630 8jfl:J (2.9) BS03 ADP ? GO:0005515 ... Q93100 38548794
    841631 8jfl:M (2.9) BS01 FAR ? GO:0004689 ... P46020 38548794
    841632 8jfl:N (2.9) BS01 FAR ? GO:0005515 ... Q93100 38548794
    841633 8jfl:N (2.9) BS02 FAR ? GO:0005515 ... Q93100 38548794
    841634 8jfl:N (2.9) BS03 ADP ? GO:0005515 ... Q93100 38548794
    841635 8jfm:A (2.21) BS01 NAD 1.3.1.9 GO:0004318 ... A0A086RSH0 37779101
    841636 8jfm:B (2.21) BS01 NAD 1.3.1.9 GO:0004318 ... A0A086RSH0 37779101
    841637 8jfm:C (2.21) BS01 NAD 1.3.1.9 GO:0004318 ... A0A086RSH0 37779101
    841638 8jfm:D (2.21) BS01 NAD 1.3.1.9 GO:0004318 ... A0A086RSH0 37779101
    841639 8jfm:E (2.21) BS01 NAD 1.3.1.9 GO:0004318 ... A0A086RSH0 37779101
    841640 8jfm:F (2.21) BS01 NAD 1.3.1.9 GO:0004318 ... A0A086RSH0 37779101
    841641 8jfm:G (2.21) BS01 NAD 1.3.1.9 GO:0004318 ... A0A086RSH0 37779101
    841642 8jfm:H (2.21) BS01 NAD 1.3.1.9 GO:0004318 ... A0A086RSH0 37779101
    841643 8jfn:A (2.41) BS01 NAD 1.3.1.9 GO:0004318 ... A0A086RSH0 37779101
    841644 8jfn:A (2.41) BS02 PSR 1.3.1.9 GO:0004318 ... A0A086RSH0 37779101
    841645 8jfn:B (2.41) BS01 PSR ? GO:0000035 ... Q5EDC8 37779101
    841646 8jfr:A (3.1) BS01 dna N/A GO:0003677 ... N/A 38418450
    841647 8jfr:A (3.1) BS02 dna N/A GO:0003677 ... N/A 38418450
    841648 8jfr:B (3.1) BS01 dna N/A GO:0003677 ... N/A 38418450
    841649 8jfr:B (3.1) BS02 dna N/A GO:0003677 ... N/A 38418450
    841650 8jfr:C (3.1) BS01 dna N/A GO:0003677 ... N/A 38418450
    841651 8jfr:C (3.1) BS02 dna N/A GO:0003677 ... N/A 38418450
    841652 8jfr:D (3.1) BS01 dna N/A GO:0003677 ... N/A 38418450
    841653 8jfr:D (3.1) BS02 dna N/A GO:0003677 ... N/A 38418450
    841654 8jfs:A (1.0) BS01 PO4 3.6.1.7 GO:0003998 ... Q9RVU3 37302289
    841655 8jfs:B (1.0) BS01 PO4 3.6.1.7 GO:0003998 ... Q9RVU3 37302289
    841656 8jft:A (3.31) BS01 rna 3.1.-.- GO:0003676 ... J7RUA5 38418450
    841657 8jft:C (3.31) BS01 rna N/A N/A N/A 38418450
    841658 8jfu:A (3.15) BS01 dna N/A N/A N/A 38418450
    841659 8jfu:A (3.15) BS02 dna N/A N/A N/A 38418450
    841660 8jfu:B (3.15) BS01 dna N/A N/A N/A 38418450
    841661 8jfu:B (3.15) BS02 dna N/A N/A N/A 38418450
    841662 8jfu:C (3.15) BS01 dna N/A N/A N/A 38418450
    841663 8jfu:C (3.15) BS02 dna N/A N/A N/A 38418450
    841664 8jfu:D (3.15) BS01 dna N/A N/A N/A 38418450
    841665 8jfu:D (3.15) BS02 dna N/A N/A N/A 38418450
    841666 8jfv:A (3.05) BS01 I4Y ? GO:0000976 ... A0A454A0X5 37805153
    841667 8jfv:A (3.05) BS02 EPE ? GO:0000976 ... A0A454A0X5 37805153
    841668 8jfv:B (3.05) BS01 EPE ? GO:0000976 ... A0A454A0X5 37805153
    841669 8jfw:D (3.64) BS01 FE N/A GO:0004721 ... P40421 N/A
    841670 8jfw:D (3.64) BS02 ZN N/A GO:0004721 ... P40421 N/A
    841671 8jfy:A (2.79) BS01 CA N/A GO:0005509 ... C6SUZ2 N/A
    841672 8jfy:A (2.79) BS02 CA N/A GO:0005509 ... C6SUZ2 N/A
    841673 8jfy:A (2.79) BS03 CA N/A GO:0005509 ... C6SUZ2 N/A
    841674 8jfy:A (2.79) BS04 CA N/A GO:0005509 ... C6SUZ2 N/A
    841675 8jfy:B (2.79) BS01 CA N/A GO:0005509 ... C6SUZ2 N/A
    841676 8jfy:B (2.79) BS02 CA N/A GO:0005509 ... C6SUZ2 N/A
    841677 8jfy:B (2.79) BS03 CA N/A GO:0005509 ... C6SUZ2 N/A
    841678 8jfy:B (2.79) BS04 CA N/A GO:0005509 ... C6SUZ2 N/A
    841679 8jfy:C (2.79) BS01 ZN N/A GO:0004721 ... P40421 N/A
    841680 8jfy:C (2.79) BS02 FE N/A GO:0004721 ... P40421 N/A
    841681 8jfy:C (2.79) BS03 CA N/A GO:0004721 ... P40421 N/A
    841682 8jfy:C (2.79) BS04 CA N/A GO:0004721 ... P40421 N/A
    841683 8jfy:D (2.79) BS01 ZN N/A GO:0004721 ... P40421 N/A
    841684 8jfy:D (2.79) BS02 FE N/A GO:0004721 ... P40421 N/A
    841685 8jfy:D (2.79) BS03 CA N/A GO:0004721 ... P40421 N/A
    841686 8jfy:D (2.79) BS04 CA N/A GO:0004721 ... P40421 N/A
    841687 8jfz:A (3.5) BS01 CLR ? GO:0000166 ... Q4H132 37357620
    841688 8jfz:A (3.5) BS02 MG ? GO:0000166 ... Q4H132 37357620
    841689 8jfz:C (3.5) BS01 MG ? GO:0000166 ... Q4H132 37357620
    841690 8jfz:C (3.5) BS02 CLR ? GO:0000166 ... Q4H132 37357620
    841691 8jfz:E (3.5) BS01 CLR ? GO:0016020 ... Q70Q12 37357620
    841692 8jfz:G (3.5) BS01 CLR ? GO:0016020 ... Q70Q12 37357620
    841693 8jg2:A (1.64) BS01 COA 2.3.1.9 GO:0003985 ... A0A848BQU5 40932660
    841694 8jg2:B (1.64) BS01 COA 2.3.1.9 GO:0003985 ... A0A848BQU5 40932660
    841695 8jg4:A (2.3) BS01 peptide ? GO:0006355 ... Q9FH40 N/A
    841696 8jg4:B (2.3) BS01 peptide ? GO:0006355 ... Q9FH40 N/A
    841697 8jg7:A (2.85) BS01 PLP 4.1.1.- GO:0016830 ... Q9MA74 39287621
    841698 8jg7:A (2.85) BS02 ZN 4.1.1.- GO:0016830 ... Q9MA74 39287621
    841699 8jg7:C (2.85) BS01 PLP 4.1.1.- GO:0016830 ... Q9MA74 39287621
    841700 8jg7:C (2.85) BS02 ZN 4.1.1.- GO:0016830 ... Q9MA74 39287621
    841701 8jg7:D (2.85) BS01 PLP 4.1.1.- GO:0016830 ... Q9MA74 39287621
    841702 8jg7:D (2.85) BS02 ZN 4.1.1.- GO:0016830 ... Q9MA74 39287621
    841703 8jg7:E (2.85) BS01 PLP 4.1.1.- GO:0016830 ... Q9MA74 39287621
    841704 8jg7:E (2.85) BS02 ZN 4.1.1.- GO:0016830 ... Q9MA74 39287621
    841705 8jg8:A (2.90002) BS01 C74 2.7.11.1 GO:0000212 ... O14965 38248139
    841706 8jg9:A (3.82) BS01 rna 3.1.-.- GO:0003676 ... J7RUA5 38418450
    841707 8jg9:C (3.82) BS01 rna N/A N/A N/A 38418450
    841708 8jg9:C (3.82) BS02 dna N/A N/A N/A 38418450
    841709 8jg9:C (3.82) BS03 dna N/A N/A N/A 38418450
    841710 8jg9:D (3.82) BS01 rna 3.1.-.- GO:0003676 ... J7RUA5 38418450
    841711 8jg9:F (3.82) BS01 rna N/A N/A N/A 38418450
    841712 8jg9:F (3.82) BS02 dna N/A N/A N/A 38418450
    841713 8jg9:F (3.82) BS03 dna N/A N/A N/A 38418450
    841714 8jgd:A (1.60037) BS01 GDP 3.6.5.2 GO:0003924 ... P01116 37534597
    841715 8jgd:A (1.60037) BS02 DWI 3.6.5.2 GO:0003924 ... P01116 37534597
    841716 8jgf:R (2.7) BS01 peptide ? GO:0004888 ... Q96LB2 37591889
    841717 8jgg:R (3.0) BS01 peptide ? GO:0004888 ... Q96LB2 37591889
    841718 8jgj:A (3.3) BS01 ATP N/A GO:0005216 ... P51791 39107281
    841719 8jgj:A (3.3) BS02 CL N/A GO:0005216 ... P51791 39107281
    841720 8jgj:B (3.3) BS01 ATP N/A GO:0005216 ... P51791 39107281
    841721 8jgj:B (3.3) BS02 CL N/A GO:0005216 ... P51791 39107281
    841722 8jgk:A (4.04) BS01 ADP N/A GO:0005216 ... P51791 39107281
    841723 8jgk:B (4.04) BS01 ADP N/A GO:0005216 ... P51791 39107281
    841724 8jgl:A (3.14) BS01 AMP N/A GO:0005216 ... P51791 39107281
    841725 8jgl:B (3.14) BS01 AMP N/A GO:0005216 ... P51791 39107281
    841726 8jgo:A (1.9) BS01 MG ? GO:0016462 ... Q9RYW9 38682481
    841727 8jgp:A (3.02) BS01 MN ? GO:0016462 ... Q9RYW9 38682481
    841728 8jgp:A (3.02) BS02 PO4 ? GO:0016462 ... Q9RYW9 38682481
    841729 8jgq:A (2.5) BS01 UG3 ? GO:0016462 ... Q9RYW9 38682481
    841730 8jgq:A (2.5) BS02 MG ? GO:0016462 ... Q9RYW9 38682481
    841731 8jgr:A (2.5) BS01 PO4 ? GO:0016462 ... Q9RYW9 38682481
    841732 8jgr:A (2.5) BS02 PO4 ? GO:0016462 ... Q9RYW9 38682481
    841733 8jgt:A (2.2) BS01 MG ? GO:0016462 ... Q9RYW9 38682481
    841734 8jgv:A (2.98) BS01 ATP N/A GO:0005216 ... P51791 39107281
    841735 8jgv:B (2.98) BS01 ATP N/A GO:0005216 ... P51791 39107281
    841736 8jgw:A (1.8) BS01 MG N/A GO:0004309 ... A0A171A1Q0 38682481
    841737 8jh0:A (2.79) BS01 RET ? GO:0016020 ... S2D3K4 37890784
    841738 8jh0:B (2.79) BS01 RET ? GO:0016020 ... S2D3K4 37890784
    841739 8jh1:A (2.89) BS01 rna 3.1.-.- N/A Q53W17 38177499
    841740 8jh1:B (2.89) BS01 rna 3.1.-.- N/A Q53W17 38177499
    841741 8jh2:A (5.7) BS01 rna 2.7.7.6 GO:0000785 ... C4R4Y0 37981206
    841742 8jh2:A (5.7) BS02 dna 2.7.7.6 GO:0000785 ... C4R4Y0 37981206
    841743 8jh2:A (5.7) BS03 ZN 2.7.7.6 GO:0000785 ... C4R4Y0 37981206
    841744 8jh2:A (5.7) BS04 ZN 2.7.7.6 GO:0000785 ... C4R4Y0 37981206
    841745 8jh2:A (5.7) BS05 MG 2.7.7.6 GO:0000785 ... C4R4Y0 37981206
    841746 8jh2:B (5.7) BS01 rna 2.7.7.6 GO:0001172 ... C4QZQ7 37981206
    841747 8jh2:B (5.7) BS02 dna 2.7.7.6 GO:0001172 ... C4QZQ7 37981206
    841748 8jh2:B (5.7) BS03 ZN 2.7.7.6 GO:0001172 ... C4QZQ7 37981206
    841749 8jh2:C (5.7) BS01 ZN ? GO:0000428 ... C4R7L2 37981206
    841750 8jh2:I (5.7) BS01 ZN ? GO:0001193 ... F2QPE6 37981206
    841751 8jh2:I (5.7) BS02 ZN ? GO:0001193 ... F2QPE6 37981206
    841752 8jh2:J (5.7) BS01 ZN ? GO:0003677 ... C4R009 37981206
    841753 8jh2:L (5.7) BS01 ZN ? GO:0003677 ... F2QMI1 37981206
    841754 8jh2:M (5.7) BS01 ZN ? GO:0000993 ... C4QZ45 37981206
    841755 8jh2:V (5.7) BS01 ZN ? GO:0000182 ... C4R0E6 37981206
    841756 8jh2:W (5.7) BS01 dna ? GO:0003711 ... C4R370 37981206
    841757 8jh2:a (5.7) BS01 dna ? GO:0000776 ... P84243 37981206
    841758 8jh2:a (5.7) BS02 dna ? GO:0000776 ... P84243 37981206
    841759 8jh2:c (5.7) BS01 dna ? GO:0000786 ... P04908 37981206
    841760 8jh2:c (5.7) BS02 dna ? GO:0000786 ... P04908 37981206
    841761 8jh2:d (5.7) BS01 dna ? GO:0000786 ... P06899 37981206
    841762 8jh2:e (5.7) BS01 dna ? GO:0000776 ... P84243 37981206
    841763 8jh2:e (5.7) BS02 dna ? GO:0000776 ... P84243 37981206
    841764 8jh2:f (5.7) BS01 dna ? GO:0000781 ... P62805 37981206
    841765 8jh2:g (5.7) BS01 dna ? GO:0000786 ... P04908 37981206
    841766 8jh2:h (5.7) BS01 dna ? GO:0000786 ... P06899 37981206
    841767 8jh3:A (3.7) BS01 rna 2.7.7.6 GO:0000785 ... C4R4Y0 37981206
    841768 8jh3:A (3.7) BS02 dna 2.7.7.6 GO:0000785 ... C4R4Y0 37981206
    841769 8jh3:A (3.7) BS03 ZN 2.7.7.6 GO:0000785 ... C4R4Y0 37981206
    841770 8jh3:A (3.7) BS04 ZN 2.7.7.6 GO:0000785 ... C4R4Y0 37981206
    841771 8jh3:A (3.7) BS05 MG 2.7.7.6 GO:0000785 ... C4R4Y0 37981206
    841772 8jh3:B (3.7) BS01 rna 2.7.7.6 GO:0001172 ... C4QZQ7 37981206
    841773 8jh3:B (3.7) BS02 dna 2.7.7.6 GO:0001172 ... C4QZQ7 37981206
    841774 8jh3:B (3.7) BS03 ZN 2.7.7.6 GO:0001172 ... C4QZQ7 37981206
    841775 8jh3:C (3.7) BS01 ZN ? GO:0000428 ... C4R7L2 37981206
    841776 8jh3:I (3.7) BS01 ZN ? GO:0001193 ... F2QPE6 37981206
    841777 8jh3:I (3.7) BS02 ZN ? GO:0001193 ... F2QPE6 37981206
    841778 8jh3:J (3.7) BS01 ZN ? GO:0003677 ... C4R009 37981206
    841779 8jh3:L (3.7) BS01 ZN ? GO:0003677 ... F2QMI1 37981206
    841780 8jh3:a (3.7) BS01 dna ? GO:0000776 ... P84243 37981206
    841781 8jh3:a (3.7) BS02 dna ? GO:0000776 ... P84243 37981206
    841782 8jh3:b (3.7) BS01 dna ? GO:0000781 ... P62805 37981206
    841783 8jh3:c (3.7) BS01 dna ? GO:0000786 ... P04908 37981206
    841784 8jh3:c (3.7) BS02 dna ? GO:0000786 ... P04908 37981206
    841785 8jh3:d (3.7) BS01 dna ? GO:0000786 ... P06899 37981206
    841786 8jh3:e (3.7) BS01 dna ? GO:0000776 ... P84243 37981206
    841787 8jh3:g (3.7) BS01 dna ? GO:0000786 ... P04908 37981206
    841788 8jh3:h (3.7) BS01 dna ? GO:0000786 ... P06899 37981206
    841789 8jh4:A (3.2) BS01 dna 2.7.7.6 GO:0000785 ... C4R4Y0 37981206
    841790 8jh4:A (3.2) BS02 rna 2.7.7.6 GO:0000785 ... C4R4Y0 37981206
    841791 8jh4:A (3.2) BS03 dna 2.7.7.6 GO:0000785 ... C4R4Y0 37981206
    841792 8jh4:A (3.2) BS04 ZN 2.7.7.6 GO:0000785 ... C4R4Y0 37981206
    841793 8jh4:A (3.2) BS05 ZN 2.7.7.6 GO:0000785 ... C4R4Y0 37981206
    841794 8jh4:A (3.2) BS06 MG 2.7.7.6 GO:0000785 ... C4R4Y0 37981206
    841795 8jh4:B (3.2) BS01 rna 2.7.7.6 GO:0001172 ... C4QZQ7 37981206
    841796 8jh4:B (3.2) BS02 dna 2.7.7.6 GO:0001172 ... C4QZQ7 37981206
    841797 8jh4:B (3.2) BS03 ZN 2.7.7.6 GO:0001172 ... C4QZQ7 37981206
    841798 8jh4:C (3.2) BS01 ZN ? GO:0000428 ... C4R7L2 37981206
    841799 8jh4:E (3.2) BS01 dna ? GO:0001172 ... C4R3P8 37981206
    841800 8jh4:I (3.2) BS01 ZN ? GO:0001193 ... F2QPE6 37981206

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).