SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    842801 8k7y:A (1.7) BS01 ZN 3.2.1.185 N/A A0AA45ZPU1 38324037
    842802 8k7y:E (1.7) BS01 ZN 3.2.1.185 N/A A0AA45ZPU1 38324037
    842803 8k81:A (-1.00) BS01 ZN N/A GO:0003700 ... Q01101 N/A
    842804 8k82:CN (3.0) BS01 rna N/A GO:0000289 ... Q12514 38942792
    842805 8k82:CN (3.0) BS02 rna N/A GO:0000289 ... Q12514 38942792
    842806 8k82:CN (3.0) BS03 rna N/A GO:0000289 ... Q12514 38942792
    842807 8k82:L1 (3.0) BS01 rna N/A GO:0000055 ... P0CX43 38942792
    842808 8k82:LA (3.0) BS01 rna N/A GO:0002181 ... P0CX45 38942792
    842809 8k82:LA (3.0) BS02 rna N/A GO:0002181 ... P0CX45 38942792
    842810 8k82:LB (3.0) BS01 rna N/A GO:0000027 ... P14126 38942792
    842811 8k82:LC (3.0) BS01 rna N/A GO:0002181 ... P10664 38942792
    842812 8k82:LC (3.0) BS02 rna N/A GO:0002181 ... P10664 38942792
    842813 8k82:LD (3.0) BS01 rna N/A GO:0000027 ... P26321 38942792
    842814 8k82:LD (3.0) BS02 rna N/A GO:0000027 ... P26321 38942792
    842815 8k82:LE (3.0) BS01 rna N/A GO:0000027 ... Q02326 38942792
    842816 8k82:LF (3.0) BS01 rna N/A GO:0000463 ... P05737 38942792
    842817 8k82:LF (3.0) BS02 rna N/A GO:0000463 ... P05737 38942792
    842818 8k82:LG (3.0) BS01 rna N/A GO:0000470 ... P17076 38942792
    842819 8k82:LG (3.0) BS02 rna N/A GO:0000470 ... P17076 38942792
    842820 8k82:LH (3.0) BS01 rna N/A GO:0002181 ... P05738 38942792
    842821 8k82:LI (3.0) BS01 rna N/A GO:0000027 ... P41805 38942792
    842822 8k82:LI (3.0) BS02 rna N/A GO:0000027 ... P41805 38942792
    842823 8k82:LJ (3.0) BS01 rna N/A GO:0000027 ... P0C0W9 38942792
    842824 8k82:LJ (3.0) BS02 rna N/A GO:0000027 ... P0C0W9 38942792
    842825 8k82:LJ (3.0) BS03 rna N/A GO:0000027 ... P0C0W9 38942792
    842826 8k82:LK (3.0) BS01 rna N/A GO:0000027 ... P0CX53 38942792
    842827 8k82:LL (3.0) BS01 rna N/A GO:0002181 ... Q12690 38942792
    842828 8k82:LL (3.0) BS02 rna N/A GO:0002181 ... Q12690 38942792
    842829 8k82:LM (3.0) BS01 rna N/A GO:0000027 ... P36105 38942792
    842830 8k82:LN (3.0) BS01 rna N/A GO:0002181 ... P05748 38942792
    842831 8k82:LN (3.0) BS02 rna N/A GO:0002181 ... P05748 38942792
    842832 8k82:LN (3.0) BS03 MG N/A GO:0002181 ... P05748 38942792
    842833 8k82:LO (3.0) BS01 rna N/A GO:0000470 ... P26784 38942792
    842834 8k82:LP (3.0) BS01 rna N/A GO:0000448 ... P05740 38942792
    842835 8k82:LP (3.0) BS02 rna N/A GO:0000448 ... P05740 38942792
    842836 8k82:LQ (3.0) BS01 rna N/A GO:0002181 ... P0CX49 38942792
    842837 8k82:LR (3.0) BS01 rna N/A GO:0002181 ... P0CX82 38942792
    842838 8k82:LS (3.0) BS01 rna N/A GO:0002181 ... P0CX23 38942792
    842839 8k82:LS (3.0) BS02 rna N/A GO:0002181 ... P0CX23 38942792
    842840 8k82:LT (3.0) BS01 rna N/A GO:0002181 ... Q02753 38942792
    842841 8k82:LT (3.0) BS02 rna N/A GO:0002181 ... Q02753 38942792
    842842 8k82:LU (3.0) BS01 rna N/A GO:0002181 ... P05749 38942792
    842843 8k82:LV (3.0) BS01 rna N/A GO:0002181 ... P0CX41 38942792
    842844 8k82:LV (3.0) BS02 rna N/A GO:0002181 ... P0CX41 38942792
    842845 8k82:LW (3.0) BS01 rna N/A GO:0002181 ... P04449 38942792
    842846 8k82:LX (3.0) BS01 rna N/A GO:0000027 ... P04456 38942792
    842847 8k82:LX (3.0) BS02 rna N/A GO:0000027 ... P04456 38942792
    842848 8k82:LY (3.0) BS01 rna N/A GO:0002181 ... P05743 38942792
    842849 8k82:LY (3.0) BS02 rna N/A GO:0002181 ... P05743 38942792
    842850 8k82:LZ (3.0) BS01 rna N/A GO:0002181 ... P0C2H6 38942792
    842851 8k82:La (3.0) BS01 rna N/A GO:0002181 ... P02406 38942792
    842852 8k82:Lb (3.0) BS01 rna N/A GO:0002181 ... P05747 38942792
    842853 8k82:Lc (3.0) BS01 rna N/A GO:0002181 ... P14120 38942792
    842854 8k82:Ld (3.0) BS01 rna N/A GO:0002181 ... P0C2H8 38942792
    842855 8k82:Le (3.0) BS01 rna N/A GO:0002181 ... P38061 38942792
    842856 8k82:Lf (3.0) BS01 rna N/A GO:0000027 ... P05744 38942792
    842857 8k82:Lg (3.0) BS01 rna N/A GO:0002181 ... P87262 38942792
    842858 8k82:Lg (3.0) BS02 ZN N/A GO:0002181 ... P87262 38942792
    842859 8k82:Lh (3.0) BS01 rna N/A GO:0000463 ... P0CX84 38942792
    842860 8k82:Lh (3.0) BS02 rna N/A GO:0000463 ... P0CX84 38942792
    842861 8k82:Li (3.0) BS01 rna N/A GO:0002181 ... P05745 38942792
    842862 8k82:Lj (3.0) BS01 rna N/A GO:0000448 ... P49166 38942792
    842863 8k82:Lj (3.0) BS02 rna N/A GO:0000448 ... P49166 38942792
    842864 8k82:Lj (3.0) BS03 T1C N/A GO:0000448 ... P49166 38942792
    842865 8k82:Lj (3.0) BS04 ZN N/A GO:0000448 ... P49166 38942792
    842866 8k82:Lk (3.0) BS01 rna N/A GO:0002181 ... P49167 38942792
    842867 8k82:Ll (3.0) BS01 rna N/A GO:0002181 ... P04650 38942792
    842868 8k82:Ll (3.0) BS02 rna N/A GO:0002181 ... P04650 38942792
    842869 8k82:Lm (3.0) BS01 rna N/A GO:0000027 ... P0CH08 38942792
    842870 8k82:Lm (3.0) BS02 ZN N/A GO:0000027 ... P0CH08 38942792
    842871 8k82:Lo (3.0) BS01 rna N/A GO:0002181 ... P0CX27 38942792
    842872 8k82:Lo (3.0) BS02 ZN N/A GO:0002181 ... P0CX27 38942792
    842873 8k82:Lp (3.0) BS01 rna N/A GO:0002181 ... P0CX25 38942792
    842874 8k82:Lp (3.0) BS02 ZN N/A GO:0002181 ... P0CX25 38942792
    842875 8k82:P0 (3.0) BS01 rna N/A GO:0000027 ... P05317 38942792
    842876 8k82:SA (3.0) BS01 rna N/A GO:0000028 ... P32905 38942792
    842877 8k82:SB (3.0) BS01 rna N/A GO:0000462 ... P33442 38942792
    842878 8k82:SC (3.0) BS01 rna N/A GO:0000054 ... P25443 38942792
    842879 8k82:SD (3.0) BS01 rna N/A GO:0000054 ... P05750 38942792
    842880 8k82:SE (3.0) BS01 rna N/A GO:0002181 ... P0CX35 38942792
    842881 8k82:SF (3.0) BS01 rna N/A GO:0000028 ... P26783 38942792
    842882 8k82:SG (3.0) BS01 rna N/A GO:0000462 ... P0CX37 38942792
    842883 8k82:SH (3.0) BS01 rna N/A GO:0002181 ... P26786 38942792
    842884 8k82:SI (3.0) BS01 rna N/A GO:0000462 ... P0CX39 38942792
    842885 8k82:SI (3.0) BS02 rna N/A GO:0000462 ... P0CX39 38942792
    842886 8k82:SJ (3.0) BS01 rna N/A GO:0000462 ... O13516 38942792
    842887 8k82:SK (3.0) BS01 rna N/A GO:0000054 ... Q08745 38942792
    842888 8k82:SL (3.0) BS01 rna N/A GO:0000028 ... P0CX47 38942792
    842889 8k82:SM (3.0) BS01 rna N/A GO:0000028 ... P48589 38942792
    842890 8k82:SN (3.0) BS01 rna N/A GO:0000462 ... P05756 38942792
    842891 8k82:SN (3.0) BS02 rna N/A GO:0000462 ... P05756 38942792
    842892 8k82:SO (3.0) BS01 rna N/A GO:0000028 ... P06367 38942792
    842893 8k82:SP (3.0) BS01 rna N/A GO:0000028 ... Q01855 38942792
    842894 8k82:SQ (3.0) BS01 rna N/A GO:0000462 ... P0CX51 38942792
    842895 8k82:SR (3.0) BS01 rna N/A GO:0000028 ... P02407 38942792
    842896 8k82:SS (3.0) BS01 rna N/A GO:0000054 ... P0CX55 38942792
    842897 8k82:ST (3.0) BS01 rna N/A GO:0000028 ... P07280 38942792
    842898 8k82:SU (3.0) BS01 rna N/A GO:0000462 ... P38701 38942792
    842899 8k82:SV (3.0) BS01 rna N/A GO:0000447 ... P0C0V8 38942792
    842900 8k82:SW (3.0) BS01 rna N/A GO:0002181 ... P0C0W1 38942792
    842901 8k82:SX (3.0) BS01 rna N/A GO:0000462 ... P0CX29 38942792
    842902 8k82:SY (3.0) BS01 rna N/A GO:0000462 ... P0CX31 38942792
    842903 8k82:SZ (3.0) BS01 rna N/A GO:0002181 ... Q3E792 38942792
    842904 8k82:Sa (3.0) BS01 rna N/A GO:0000054 ... P39939 38942792
    842905 8k82:Sa (3.0) BS02 ZN N/A GO:0000054 ... P39939 38942792
    842906 8k82:Sb (3.0) BS01 rna N/A GO:0000028 ... P35997 38942792
    842907 8k82:Sb (3.0) BS02 ZN N/A GO:0000028 ... P35997 38942792
    842908 8k82:Sc (3.0) BS01 rna N/A GO:0000028 ... Q3E7X9 38942792
    842909 8k82:Sd (3.0) BS01 rna N/A GO:0002181 ... P41057 38942792
    842910 8k82:Sd (3.0) BS02 ZN N/A GO:0002181 ... P41057 38942792
    842911 8k82:Se (3.0) BS01 rna N/A GO:0002181 ... P0CX33 38942792
    842912 8k82:Sf (3.0) BS01 rna N/A GO:0000028 ... P05759 38942792
    842913 8k82:Sf (3.0) BS02 ZN N/A GO:0000028 ... P05759 38942792
    842914 8k82:Sg (3.0) BS01 rna N/A GO:0001965 ... P38011 38942792
    842915 8k86:A (2.06) BS01 dna ? GO:0003677 ... Q16649 38382670
    842916 8k86:A (2.06) BS02 dna ? GO:0003677 ... Q16649 38382670
    842917 8k86:B (2.06) BS01 dna ? GO:0003677 ... Q16649 38382670
    842918 8k86:B (2.06) BS02 dna ? GO:0003677 ... Q16649 38382670
    842919 8k87:A (2.9) BS01 dna N/A GO:0003674 ... Q74DF5 38923459
    842920 8k87:A (2.9) BS02 rna N/A GO:0003674 ... Q74DF5 38923459
    842921 8k87:A (2.9) BS03 MG N/A GO:0003674 ... Q74DF5 38923459
    842922 8k87:B (2.9) BS01 dna N/A GO:0003674 ... Q74DF6 38923459
    842923 8k87:B (2.9) BS02 rna N/A GO:0003674 ... Q74DF6 38923459
    842924 8k87:F (2.9) BS01 dna N/A GO:0003674 ... Q74DF5 38923459
    842925 8k87:F (2.9) BS02 rna N/A GO:0003674 ... Q74DF5 38923459
    842926 8k87:F (2.9) BS03 MG N/A GO:0003674 ... Q74DF5 38923459
    842927 8k87:G (2.9) BS01 dna N/A GO:0003674 ... Q74DF6 38923459
    842928 8k87:G (2.9) BS02 rna N/A GO:0003674 ... Q74DF6 38923459
    842929 8k88:A (2.6) BS01 dna N/A GO:0003674 ... Q74DF5 38923459
    842930 8k88:A (2.6) BS02 rna N/A GO:0003674 ... Q74DF5 38923459
    842931 8k88:A (2.6) BS03 MG N/A GO:0003674 ... Q74DF5 38923459
    842932 8k88:B (2.6) BS01 dna N/A GO:0003674 ... Q74DF6 38923459
    842933 8k88:B (2.6) BS02 rna N/A GO:0003674 ... Q74DF6 38923459
    842934 8k8a:A (2.07) BS01 dna ? GO:0003677 ... Q16649 38382670
    842935 8k8a:A (2.07) BS02 dna ? GO:0003677 ... Q16649 38382670
    842936 8k8a:B (2.07) BS01 dna ? GO:0003677 ... Q16649 38382670
    842937 8k8a:B (2.07) BS02 dna ? GO:0003677 ... Q16649 38382670
    842938 8k8c:A (2.06) BS01 dna ? GO:0003700 ... P49715 38382670
    842939 8k8c:A (2.06) BS02 dna ? GO:0003700 ... P49715 38382670
    842940 8k8c:B (2.06) BS01 dna ? GO:0003700 ... P49715 38382670
    842941 8k8c:B (2.06) BS02 dna ? GO:0003700 ... P49715 38382670
    842942 8k8d:A (2.2) BS01 dna ? GO:0003700 ... P17676 38382670
    842943 8k8d:A (2.2) BS02 dna ? GO:0003700 ... P17676 38382670
    842944 8k8d:B (2.2) BS01 dna ? GO:0003700 ... P17676 38382670
    842945 8k8d:B (2.2) BS02 dna ? GO:0003700 ... P17676 38382670
    842946 8k8e:B (2.6) BS01 peptide 3.4.23.- GO:0000045 ... P49768 38349793
    842947 8k8e:C (2.6) BS01 CLR ? GO:0000139 ... Q96BI3 38349793
    842948 8k8j:R (2.88) BS01 J3O ? GO:0004930 ... P0ABE7
    P21554
    38298116
    842949 8k8l:A (1.77) BS01 MOO ? GO:0015689 ... A0A0H3GU89 37751633
    842950 8k8s:A (3.06) BS01 dna N/A GO:0000166 ... A0A7H0DN44 38579705
    842951 8k8s:A (3.06) BS02 dna N/A GO:0000166 ... A0A7H0DN44 38579705
    842952 8k8s:A (3.06) BS03 MG N/A GO:0000166 ... A0A7H0DN44 38579705
    842953 8k8s:A (3.06) BS04 HF4 N/A GO:0000166 ... A0A7H0DN44 38579705
    842954 8k8u:A (3.05) BS01 dna N/A GO:0000166 ... A0A7H0DN44 38579705
    842955 8k8u:A (3.05) BS02 dna N/A GO:0000166 ... A0A7H0DN44 38579705
    842956 8k8u:A (3.05) BS03 MG N/A GO:0000166 ... A0A7H0DN44 38579705
    842957 8k8u:A (3.05) BS04 MG N/A GO:0000166 ... A0A7H0DN44 38579705
    842958 8k8u:A (3.05) BS05 CTP N/A GO:0000166 ... A0A7H0DN44 38579705
    842959 8k8y:A (2.54) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842960 8k8y:B (2.54) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842961 8k8y:C (2.54) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842962 8k8y:D (2.54) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842963 8k8y:E (2.54) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842964 8k8y:F (2.54) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842965 8k8y:G (2.54) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842966 8k8z:A (2.83) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842967 8k8z:B (2.83) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842968 8k8z:C (2.83) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842969 8k8z:D (2.83) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842970 8k8z:E (2.83) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842971 8k8z:F (2.83) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842972 8k90:B (3.43) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842973 8k90:C (3.43) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842974 8k90:D (3.43) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842975 8k91:A (3.03) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842976 8k91:B (3.03) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842977 8k91:C (3.03) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842978 8k91:D (3.03) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842979 8k91:E (3.03) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842980 8k91:F (3.03) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842981 8k91:G (3.03) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842982 8k92:A (3.31) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842983 8k92:B (3.31) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842984 8k92:C (3.31) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842985 8k92:D (3.31) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842986 8k92:E (3.31) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842987 8k92:F (3.31) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842988 8k93:B (3.23) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842989 8k93:C (3.23) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842990 8k93:D (3.23) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842991 8k93:E (3.23) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842992 8k94:B (3.4) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842993 8k94:C (3.4) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842994 8k94:D (3.4) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842995 8k95:A (3.05) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842996 8k95:B (3.05) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842997 8k95:C (3.05) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842998 8k95:D (3.05) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    842999 8k95:E (3.05) BS01 TS6 N/A GO:0004176 ... C9DRU9 N/A
    843000 8k96:A (2.89) BS01 BO2 N/A GO:0004176 ... C9DRU9 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).