SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    843001 8k96:B (2.89) BS01 BO2 N/A GO:0004176 ... C9DRU9 N/A
    843002 8k96:C (2.89) BS01 BO2 N/A GO:0004176 ... C9DRU9 N/A
    843003 8k96:D (2.89) BS01 BO2 N/A GO:0004176 ... C9DRU9 N/A
    843004 8k96:E (2.89) BS01 BO2 N/A GO:0004176 ... C9DRU9 N/A
    843005 8k96:F (2.89) BS01 BO2 N/A GO:0004176 ... C9DRU9 N/A
    843006 8k96:G (2.89) BS01 BO2 N/A GO:0004176 ... C9DRU9 N/A
    843007 8k97:A (2.73) BS01 BO2 N/A GO:0004176 ... C9DRU9 N/A
    843008 8k97:B (2.73) BS01 BO2 N/A GO:0004176 ... C9DRU9 N/A
    843009 8k97:C (2.73) BS01 BO2 N/A GO:0004176 ... C9DRU9 N/A
    843010 8k97:D (2.73) BS01 BO2 N/A GO:0004176 ... C9DRU9 N/A
    843011 8k97:E (2.73) BS01 BO2 N/A GO:0004176 ... C9DRU9 N/A
    843012 8k97:F (2.73) BS01 BO2 N/A GO:0004176 ... C9DRU9 N/A
    843013 8k9e:A (3.33) BS01 HEC ? GO:0016020 ... A9WEV2 38299372
    843014 8k9e:A (3.33) BS02 HEC ? GO:0016020 ... A9WEV2 38299372
    843015 8k9e:A (3.33) BS03 HEC ? GO:0016020 ... A9WEV2 38299372
    843016 8k9e:A (3.33) BS04 HEC ? GO:0016020 ... A9WEV2 38299372
    843017 8k9e:A (3.33) BS05 HEC ? GO:0016020 ... A9WEV2 38299372
    843018 8k9e:A (3.33) BS06 EL6 ? GO:0016020 ... A9WEV2 38299372
    843019 8k9e:B (3.33) BS01 HEC ? N/A A9WEV3 38299372
    843020 8k9e:B (3.33) BS02 HEC ? N/A A9WEV3 38299372
    843021 8k9e:B (3.33) BS03 SF4 ? N/A A9WEV3 38299372
    843022 8k9e:B (3.33) BS04 SF4 ? N/A A9WEV3 38299372
    843023 8k9e:B (3.33) BS05 SF4 ? N/A A9WEV3 38299372
    843024 8k9e:B (3.33) BS06 F3S ? N/A A9WEV3 38299372
    843025 8k9e:C (3.33) BS01 JLQ ? GO:0005886 ... A9WEV4 38299372
    843026 8k9e:C (3.33) BS02 JM9 ? GO:0005886 ... A9WEV4 38299372
    843027 8k9e:D (3.33) BS01 JM9 ? GO:0016020 ... A9WEV5 38299372
    843028 8k9e:E (3.33) BS01 HEC ? GO:0009055 ... A9WEV6 38299372
    843029 8k9e:E (3.33) BS02 HEC ? GO:0009055 ... A9WEV6 38299372
    843030 8k9e:F (3.33) BS01 JLQ ? GO:0016020 ... A9WEV7 38299372
    843031 8k9e:F (3.33) BS02 JL3 ? GO:0016020 ... A9WEV7 38299372
    843032 8k9e:F (3.33) BS03 JM9 ? GO:0016020 ... A9WEV7 38299372
    843033 8k9f:A (2.9) BS01 HEC ? GO:0016020 ... A9WEV2 38299372
    843034 8k9f:A (2.9) BS02 HEC ? GO:0016020 ... A9WEV2 38299372
    843035 8k9f:A (2.9) BS03 HEC ? GO:0016020 ... A9WEV2 38299372
    843036 8k9f:A (2.9) BS04 HEC ? GO:0016020 ... A9WEV2 38299372
    843037 8k9f:A (2.9) BS05 HEC ? GO:0016020 ... A9WEV2 38299372
    843038 8k9f:B (2.9) BS01 HEC ? N/A A9WEV3 38299372
    843039 8k9f:B (2.9) BS02 HEC ? N/A A9WEV3 38299372
    843040 8k9f:B (2.9) BS03 SF4 ? N/A A9WEV3 38299372
    843041 8k9f:B (2.9) BS04 SF4 ? N/A A9WEV3 38299372
    843042 8k9f:B (2.9) BS05 SF4 ? N/A A9WEV3 38299372
    843043 8k9f:B (2.9) BS06 F3S ? N/A A9WEV3 38299372
    843044 8k9f:B (2.9) BS07 MG ? N/A A9WEV3 38299372
    843045 8k9f:C (2.9) BS01 HEC ? GO:0005886 ... A9WEV4 38299372
    843046 8k9f:C (2.9) BS02 JLQ ? GO:0005886 ... A9WEV4 38299372
    843047 8k9f:C (2.9) BS03 JL3 ? GO:0005886 ... A9WEV4 38299372
    843048 8k9f:C (2.9) BS04 JM9 ? GO:0005886 ... A9WEV4 38299372
    843049 8k9f:D (2.9) BS01 JM9 ? GO:0016020 ... A9WEV5 38299372
    843050 8k9f:E (2.9) BS01 HEC ? GO:0009055 ... A9WEV6 38299372
    843051 8k9f:E (2.9) BS02 HEC ? GO:0009055 ... A9WEV6 38299372
    843052 8k9f:E (2.9) BS03 HEC ? GO:0009055 ... A9WEV6 38299372
    843053 8k9f:F (2.9) BS01 JLQ ? GO:0016020 ... A9WEV7 38299372
    843054 8k9f:F (2.9) BS02 JL3 ? GO:0016020 ... A9WEV7 38299372
    843055 8k9f:F (2.9) BS03 JM9 ? GO:0016020 ... A9WEV7 38299372
    843056 8k9g:A (3.49) BS01 dna ? GO:0003676 ... A0A1I7NFD7 37783228
    843057 8k9g:A (3.49) BS02 rna ? GO:0003676 ... A0A1I7NFD7 37783228
    843058 8k9g:B (3.49) BS01 dna ? GO:0007165 ... A0A1I7NFG5 37783228
    843059 8k9g:B (3.49) BS02 rna ? GO:0007165 ... A0A1I7NFG5 37783228
    843060 8k9g:E (3.49) BS01 dna ? GO:0003676 ... A0A1I7NFD7 37783228
    843061 8k9g:E (3.49) BS02 rna ? GO:0003676 ... A0A1I7NFD7 37783228
    843062 8k9g:F (3.49) BS01 dna ? GO:0007165 ... A0A1I7NFG5 37783228
    843063 8k9g:F (3.49) BS02 rna ? GO:0007165 ... A0A1I7NFG5 37783228
    843064 8k9k:R (2.98) BS01 peptide ? GO:0004930 ... P0ABE7
    P35372
    38740791
    843065 8k9l:R (3.05) BS01 peptide ? GO:0004930 ... P0ABE7
    P35372
    38740791
    843066 8k9l:R (3.05) BS02 VV9 ? GO:0004930 ... P0ABE7
    P35372
    38740791
    843067 8k9n:A (0.86) BS01 CU ? GO:0005507 ... P04377 38232298
    843068 8k9p:A (1.5) BS01 CU ? GO:0042597 ... P04377 38232298
    843069 8k9q:A (2.84) BS01 Y01 3.1.-.- GO:0005783 ... G0S652 38167496
    843070 8k9q:A (2.84) BS02 Y01 3.1.-.- GO:0005783 ... G0S652 38167496
    843071 8k9q:A (2.84) BS03 Y01 3.1.-.- GO:0005783 ... G0S652 38167496
    843072 8k9q:A (2.84) BS04 D39 3.1.-.- GO:0005783 ... G0S652 38167496
    843073 8k9q:A (2.84) BS05 D39 3.1.-.- GO:0005783 ... G0S652 38167496
    843074 8k9r:A (2.68) BS01 peptide 3.1.-.- GO:0005783 ... G0S652 38167496
    843075 8k9r:A (2.68) BS02 MAN 3.1.-.- GO:0005783 ... G0S652 38167496
    843076 8k9r:A (2.68) BS03 05E 3.1.-.- GO:0005783 ... G0S652 38167496
    843077 8k9r:A (2.68) BS04 PA1 3.1.-.- GO:0005783 ... G0S652 38167496
    843078 8k9r:A (2.68) BS05 L9H 3.1.-.- GO:0005783 ... G0S652 38167496
    843079 8k9r:A (2.68) BS06 CLR 3.1.-.- GO:0005783 ... G0S652 38167496
    843080 8k9r:A (2.68) BS07 80Y 3.1.-.- GO:0005783 ... G0S652 38167496
    843081 8k9s:A (2.35) BS01 LYS N/A GO:0000166 ... A0A024X378 38890421
    843082 8k9s:A (2.35) BS02 JRU N/A GO:0000166 ... A0A024X378 38890421
    843083 8k9s:B (2.35) BS01 LYS N/A GO:0000166 ... A0A024X378 38890421
    843084 8k9s:B (2.35) BS02 JRU N/A GO:0000166 ... A0A024X378 38890421
    843085 8k9t:A (2.66) BS01 peptide 3.1.-.- GO:0005783 ... G0S652 38167496
    843086 8k9t:A (2.66) BS02 MAN 3.1.-.- GO:0005783 ... G0S652 38167496
    843087 8k9t:A (2.66) BS03 05E 3.1.-.- GO:0005783 ... G0S652 38167496
    843088 8k9t:A (2.66) BS04 PA1 3.1.-.- GO:0005783 ... G0S652 38167496
    843089 8k9t:A (2.66) BS05 LYI 3.1.-.- GO:0005783 ... G0S652 38167496
    843090 8k9t:A (2.66) BS06 CLR 3.1.-.- GO:0005783 ... G0S652 38167496
    843091 8k9t:A (2.66) BS07 CLR 3.1.-.- GO:0005783 ... G0S652 38167496
    843092 8k9t:A (2.66) BS08 80Y 3.1.-.- GO:0005783 ... G0S652 38167496
    843093 8k9u:A (2.83) BS01 LYS N/A GO:0000166 ... A0A024X378 38890421
    843094 8k9u:A (2.83) BS02 JSL N/A GO:0000166 ... A0A024X378 38890421
    843095 8k9u:B (2.83) BS01 LYS N/A GO:0000166 ... A0A024X378 38890421
    843096 8k9u:B (2.83) BS02 JSL N/A GO:0000166 ... A0A024X378 38890421
    843097 8k9v:A (1.92) BS01 LYS N/A GO:0000166 ... A0A024X378 38890421
    843098 8k9v:A (1.92) BS02 JT4 N/A GO:0000166 ... A0A024X378 38890421
    843099 8k9v:B (1.92) BS01 LYS N/A GO:0000166 ... A0A024X378 38890421
    843100 8k9v:B (1.92) BS02 JT4 N/A GO:0000166 ... A0A024X378 38890421
    843101 8k9w:A (2.3) BS01 JTR N/A GO:0000166 ... A0A024X378 38890421
    843102 8k9w:B (2.3) BS01 JTR N/A GO:0000166 ... A0A024X378 38890421
    843103 8k9x:A (2.35) BS01 JUA N/A GO:0000166 ... A0A024X378 38890421
    843104 8k9x:B (2.35) BS01 JUA N/A GO:0000166 ... A0A024X378 38890421
    843105 8k9y:A (1.82) BS01 A3P 2.8.2.24 GO:0005737 ... Q9C9D0 37586213
    843106 8k9y:B (1.82) BS01 A3P 2.8.2.24 GO:0005737 ... Q9C9D0 37586213
    843107 8k9z:B (2.9) BS01 CA N/A GO:0000086 ... P0DP24 39043696
    843108 8k9z:B (2.9) BS02 CA N/A GO:0000086 ... P0DP24 39043696
    843109 8k9z:B (2.9) BS03 CA N/A GO:0000086 ... P0DP24 39043696
    843110 8k9z:B (2.9) BS04 CA N/A GO:0000086 ... P0DP24 39043696
    843111 8k9z:D (2.9) BS01 CA N/A GO:0000086 ... P0DP24 39043696
    843112 8k9z:D (2.9) BS02 CA N/A GO:0000086 ... P0DP24 39043696
    843113 8k9z:D (2.9) BS03 CA N/A GO:0000086 ... P0DP24 39043696
    843114 8k9z:D (2.9) BS04 CA N/A GO:0000086 ... P0DP24 39043696
    843115 8ka0:A (2.35) BS01 NAD N/A N/A A0A2S3R7M0 39043696
    843116 8ka0:B (2.35) BS01 CA N/A GO:0000086 ... P0DP24 39043696
    843117 8ka0:B (2.35) BS02 CA N/A GO:0000086 ... P0DP24 39043696
    843118 8ka0:C (2.35) BS01 NAD N/A N/A A0A2S3R7M0 39043696
    843119 8ka0:D (2.35) BS01 CA N/A GO:0000086 ... P0DP24 39043696
    843120 8ka0:D (2.35) BS02 CA N/A GO:0000086 ... P0DP24 39043696
    843121 8ka0:E (2.35) BS01 NAD N/A N/A A0A2S3R7M0 39043696
    843122 8ka0:F (2.35) BS01 CA N/A GO:0000086 ... P0DP24 39043696
    843123 8ka0:F (2.35) BS02 CA N/A GO:0000086 ... P0DP24 39043696
    843124 8ka0:G (2.35) BS01 NAD N/A N/A A0A2S3R7M0 39043696
    843125 8ka0:H (2.35) BS01 CA N/A GO:0000086 ... P0DP24 39043696
    843126 8ka0:H (2.35) BS02 CA N/A GO:0000086 ... P0DP24 39043696
    843127 8ka1:F (2.82) BS01 MG N/A GO:0000086 ... P0DP24 39043696
    843128 8ka1:F (2.82) BS02 MG N/A GO:0000086 ... P0DP24 39043696
    843129 8ka1:F (2.82) BS03 MG N/A GO:0000086 ... P0DP24 39043696
    843130 8ka3:A (3.0) BS01 dna 3.1.11.2 GO:0003677 ... P45951 38503293
    843131 8ka3:A (3.0) BS02 dna 3.1.11.2 GO:0003677 ... P45951 38503293
    843132 8ka3:A (3.0) BS03 dna 3.1.11.2 GO:0003677 ... P45951 38503293
    843133 8ka3:A (3.0) BS04 3DR 3.1.11.2 GO:0003677 ... P45951 38503293
    843134 8ka4:B (2.3) BS01 DG 3.1.11.2 GO:0003677 ... P45951 38503293
    843135 8ka4:C (2.3) BS01 DG 3.1.11.2 GO:0003677 ... P45951 38503293
    843136 8ka5:A (2.8) BS01 dna 3.1.11.2 GO:0003677 ... P45951 38503293
    843137 8ka5:A (2.8) BS02 dna 3.1.11.2 GO:0003677 ... P45951 38503293
    843138 8ka5:A (2.8) BS03 dna 3.1.11.2 GO:0003677 ... P45951 38503293
    843139 8ka5:A (2.8) BS04 3DR 3.1.11.2 GO:0003677 ... P45951 38503293
    843140 8ka8:A (2.96) BS01 ZN 3.4.-.-
    3.4.17.23
    GO:0006508 ... A0A1U7QTA1 38305152
    843141 8kab:C (3.3) BS01 rna N/A GO:0002181 ... A0QSD4 39029461
    843142 8kab:D (3.3) BS01 rna N/A GO:0003735 ... A0QSD1 39029461
    843143 8kab:E (3.3) BS01 rna N/A GO:0003735 ... A0QSD2 39029461
    843144 8kab:F (3.3) BS01 rna N/A GO:0000049 ... A0QSG1 39029461
    843145 8kab:F (3.3) BS02 rna N/A GO:0000049 ... A0QSG1 39029461
    843146 8kab:G (3.3) BS01 rna N/A GO:0002181 ... A0QSG4 39029461
    843147 8kab:H (3.3) BS01 rna N/A GO:0003735 ... A0R7F6 39029461
    843148 8kab:I (3.3) BS01 rna N/A GO:0003735 ... A0QS62 39029461
    843149 8kab:J (3.3) BS01 rna N/A GO:0003735 ... A0QS45 39029461
    843150 8kab:K (3.3) BS01 rna N/A GO:0003729 ... A0QSP8 39029461
    843151 8kab:L (3.3) BS01 rna N/A GO:0003735 ... A0QSF9 39029461
    843152 8kab:M (3.3) BS01 rna N/A GO:0003735 ... A0QSG8 39029461
    843153 8kab:N (3.3) BS01 rna N/A GO:0000049 ... A0QSD8 39029461
    843154 8kab:O (3.3) BS01 rna N/A GO:0003735 ... A0QSL9 39029461
    843155 8kab:P (3.3) BS01 rna N/A GO:0003735 ... A0QSG5 39029461
    843156 8kab:P (3.3) BS02 rna N/A GO:0003735 ... A0QSG5 39029461
    843157 8kab:Q (3.3) BS01 rna N/A GO:0003735 ... A0QV42 39029461
    843158 8kab:R (3.3) BS01 rna N/A GO:0000027 ... A0QYU6 39029461
    843159 8kab:S (3.3) BS01 rna N/A GO:0003723 ... A0R151 39029461
    843160 8kab:T (3.3) BS01 rna N/A GO:0003735 ... A0QSD6 39029461
    843161 8kab:U (3.3) BS01 rna N/A GO:0003735 ... A0QSD3 39029461
    843162 8kab:V (3.3) BS01 rna N/A GO:0003723 ... A0QSG0 39029461
    843163 8kab:W (3.3) BS01 rna N/A GO:0003723 ... A0R3D2 39029461
    843164 8kab:X (3.3) BS01 rna N/A GO:0003735 ... A0R150 39029461
    843165 8kab:Y (3.3) BS01 rna N/A GO:0003735 ... A0QV03 39029461
    843166 8kab:Z (3.3) BS01 rna N/A GO:0003735 ... A0QSD9 39029461
    843167 8kab:a (3.3) BS01 rna N/A GO:0003735 ... A0QSG7 39029461
    843168 8kab:a (3.3) BS02 rna N/A GO:0003735 ... A0QSG7 39029461
    843169 8kab:b (3.3) BS01 rna N/A GO:0003735 ... A0R3I9 39029461
    843170 8kab:c (3.3) BS01 rna N/A GO:0003735 ... A0QS39 39029461
    843171 8kab:d (3.3) BS01 rna N/A GO:0003735 ... A0R7K0 39029461
    843172 8kab:e (3.3) BS01 rna N/A GO:0003735 ... A0QYU7 39029461
    843173 8kab:f (3.3) BS01 rna N/A GO:0003735 ... A0QSL4 39029461
    843174 8kab:g (3.3) BS01 rna N/A GO:0003735 ... A0R215 39029461
    843175 8kab:h (3.3) BS01 rna N/A GO:0003924 ... A0QVY1 39029461
    843176 8kab:h (3.3) BS02 GNP N/A GO:0003924 ... A0QVY1 39029461
    843177 8kae:R (3.18) BS01 YUX ? GO:0001782 ... Q8IVW8 38123825
    843178 8kag:B (3.88) BS01 rna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843179 8kag:B (3.88) BS02 rna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843180 8kah:B (3.36) BS01 rna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843181 8kah:B (3.36) BS02 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843182 8kah:B (3.36) BS03 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843183 8kah:B (3.36) BS04 rna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843184 8kah:F (3.36) BS01 rna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843185 8kah:F (3.36) BS02 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843186 8kah:F (3.36) BS03 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843187 8kah:F (3.36) BS04 rna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843188 8kai:B (3.49) BS01 rna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843189 8kai:B (3.49) BS02 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843190 8kai:B (3.49) BS03 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843191 8kai:B (3.49) BS04 rna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843192 8kai:F (3.49) BS01 rna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843193 8kai:F (3.49) BS02 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843194 8kai:F (3.49) BS03 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843195 8kai:F (3.49) BS04 rna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843196 8kaj:B (3.42) BS01 rna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843197 8kaj:B (3.42) BS02 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843198 8kaj:B (3.42) BS03 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843199 8kaj:B (3.42) BS04 rna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843200 8kaj:F (3.42) BS01 rna 3.1.-.- GO:0003677 ... Q99ZW2 38811761

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).