SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    843001 8jp4:D (2.53) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843002 8jp4:D (2.53) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843003 8jp4:E (2.53) BS01 CA ? GO:0016020 ... P49257 38493152
    843004 8jp4:E (2.53) BS02 CA ? GO:0016020 ... P49257 38493152
    843005 8jp4:F (2.53) BS01 CA ? GO:0016020 ... P49257 38493152
    843006 8jp4:F (2.53) BS02 CA ? GO:0016020 ... P49257 38493152
    843007 8jp4:G (2.53) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843008 8jp4:G (2.53) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843009 8jp4:G (2.53) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843010 8jp4:H (2.53) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843011 8jp4:H (2.53) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843012 8jp4:H (2.53) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843013 8jp5:A (2.59) BS01 CA ? GO:0016020 ... P49257 38493152
    843014 8jp5:A (2.59) BS02 CA ? GO:0016020 ... P49257 38493152
    843015 8jp5:B (2.59) BS01 CA ? GO:0016020 ... P49257 38493152
    843016 8jp5:B (2.59) BS02 CA ? GO:0016020 ... P49257 38493152
    843017 8jp5:C (2.59) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843018 8jp5:C (2.59) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843019 8jp5:C (2.59) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843020 8jp5:D (2.59) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843021 8jp5:D (2.59) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843022 8jp5:D (2.59) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843023 8jp5:E (2.59) BS01 CA ? GO:0016020 ... P49257 38493152
    843024 8jp5:E (2.59) BS02 CA ? GO:0016020 ... P49257 38493152
    843025 8jp5:F (2.59) BS01 CA ? GO:0016020 ... P49257 38493152
    843026 8jp5:F (2.59) BS02 CA ? GO:0016020 ... P49257 38493152
    843027 8jp5:G (2.59) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843028 8jp5:G (2.59) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843029 8jp5:G (2.59) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843030 8jp5:H (2.59) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843031 8jp5:H (2.59) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843032 8jp5:H (2.59) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843033 8jp6:A (3.29) BS01 CA ? GO:0016020 ... P49257 38493152
    843034 8jp6:A (3.29) BS02 CA ? GO:0016020 ... P49257 38493152
    843035 8jp6:B (3.29) BS01 CA ? GO:0016020 ... P49257 38493152
    843036 8jp6:B (3.29) BS02 CA ? GO:0016020 ... P49257 38493152
    843037 8jp6:C (3.29) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843038 8jp6:C (3.29) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843039 8jp6:C (3.29) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843040 8jp6:D (3.29) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843041 8jp6:D (3.29) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843042 8jp6:D (3.29) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843043 8jp6:E (3.29) BS01 CA ? GO:0016020 ... P49257 38493152
    843044 8jp6:E (3.29) BS02 CA ? GO:0016020 ... P49257 38493152
    843045 8jp6:F (3.29) BS01 CA ? GO:0016020 ... P49257 38493152
    843046 8jp6:F (3.29) BS02 CA ? GO:0016020 ... P49257 38493152
    843047 8jp6:G (3.29) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843048 8jp6:G (3.29) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843049 8jp6:G (3.29) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843050 8jp6:H (3.29) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843051 8jp6:H (3.29) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843052 8jp6:H (3.29) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843053 8jp7:A (3.51) BS01 CA ? GO:0016020 ... P49257 38493152
    843054 8jp7:A (3.51) BS02 CA ? GO:0016020 ... P49257 38493152
    843055 8jp7:B (3.51) BS01 CA ? GO:0016020 ... P49257 38493152
    843056 8jp7:B (3.51) BS02 CA ? GO:0016020 ... P49257 38493152
    843057 8jp7:C (3.51) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843058 8jp7:C (3.51) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843059 8jp7:C (3.51) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843060 8jp7:D (3.51) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843061 8jp7:D (3.51) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843062 8jp7:D (3.51) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843063 8jp7:E (3.51) BS01 CA ? GO:0016020 ... P49257 38493152
    843064 8jp7:E (3.51) BS02 CA ? GO:0016020 ... P49257 38493152
    843065 8jp7:F (3.51) BS01 CA ? GO:0016020 ... P49257 38493152
    843066 8jp7:F (3.51) BS02 CA ? GO:0016020 ... P49257 38493152
    843067 8jp7:G (3.51) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843068 8jp7:G (3.51) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843069 8jp7:G (3.51) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843070 8jp7:H (3.51) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843071 8jp7:H (3.51) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843072 8jp7:H (3.51) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843073 8jp8:A (3.39) BS01 CA ? GO:0016020 ... P49257 38493152
    843074 8jp8:A (3.39) BS02 CA ? GO:0016020 ... P49257 38493152
    843075 8jp8:B (3.39) BS01 CA ? GO:0016020 ... P49257 38493152
    843076 8jp8:B (3.39) BS02 CA ? GO:0016020 ... P49257 38493152
    843077 8jp8:C (3.39) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843078 8jp8:C (3.39) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843079 8jp8:C (3.39) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843080 8jp8:D (3.39) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843081 8jp8:D (3.39) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843082 8jp8:D (3.39) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843083 8jp8:E (3.39) BS01 CA ? GO:0016020 ... P49257 38493152
    843084 8jp8:E (3.39) BS02 CA ? GO:0016020 ... P49257 38493152
    843085 8jp8:F (3.39) BS01 CA ? GO:0016020 ... P49257 38493152
    843086 8jp8:F (3.39) BS02 CA ? GO:0016020 ... P49257 38493152
    843087 8jp8:G (3.39) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843088 8jp8:G (3.39) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843089 8jp8:G (3.39) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843090 8jp8:H (3.39) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843091 8jp8:H (3.39) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843092 8jp8:H (3.39) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843093 8jp9:A (3.37) BS01 CA ? GO:0016020 ... P49257 38493152
    843094 8jp9:A (3.37) BS02 CA ? GO:0016020 ... P49257 38493152
    843095 8jp9:B (3.37) BS01 CA ? GO:0016020 ... P49257 38493152
    843096 8jp9:B (3.37) BS02 CA ? GO:0016020 ... P49257 38493152
    843097 8jp9:C (3.37) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843098 8jp9:C (3.37) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843099 8jp9:C (3.37) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843100 8jp9:D (3.37) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843101 8jp9:D (3.37) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843102 8jp9:D (3.37) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843103 8jp9:E (3.37) BS01 CA ? GO:0016020 ... P49257 38493152
    843104 8jp9:E (3.37) BS02 CA ? GO:0016020 ... P49257 38493152
    843105 8jp9:F (3.37) BS01 CA ? GO:0016020 ... P49257 38493152
    843106 8jp9:F (3.37) BS02 CA ? GO:0016020 ... P49257 38493152
    843107 8jp9:G (3.37) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843108 8jp9:G (3.37) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843109 8jp9:G (3.37) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843110 8jp9:H (3.37) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843111 8jp9:H (3.37) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843112 8jp9:H (3.37) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843113 8jpb:G (3.07) BS01 STU 2.7.11.15 GO:0001664 ... P21146 37532940
    843114 8jpb:G (3.07) BS02 SRW 2.7.11.15 GO:0001664 ... P21146 37532940
    843115 8jpb:Q (3.07) BS01 GDP ? GO:0001664 ... P50148 37532940
    843116 8jpb:Q (3.07) BS02 MG ? GO:0001664 ... P50148 37532940
    843117 8jpb:Q (3.07) BS03 ALF ? GO:0001664 ... P50148 37532940
    843118 8jpb:R (3.07) BS01 peptide ? GO:0001659 ... P30989 37532940
    843119 8jpb:R (3.07) BS02 SRW ? GO:0001659 ... P30989 37532940
    843120 8jpc:G (3.07) BS01 SRW 2.7.11.15 GO:0001664 ... P21146 37532940
    843121 8jpc:G (3.07) BS02 STU 2.7.11.15 GO:0001664 ... P21146 37532940
    843122 8jpc:Q (3.07) BS01 GDP ? GO:0001664 ... P50148 37532940
    843123 8jpc:Q (3.07) BS02 MG ? GO:0001664 ... P50148 37532940
    843124 8jpc:Q (3.07) BS03 ALF ? GO:0001664 ... P50148 37532940
    843125 8jpc:R (3.07) BS01 peptide ? GO:0001659 ... P30989 37532940
    843126 8jpc:R (3.07) BS02 SRW ? GO:0001659 ... P30989 37532940
    843127 8jpd:G (2.81) BS01 STU 2.7.11.15 GO:0001664 ... P21146 37532940
    843128 8jpe:Q (2.91) BS01 GDP ? GO:0001664 ... P50148 37532940
    843129 8jpe:Q (2.91) BS02 MG ? GO:0001664 ... P50148 37532940
    843130 8jpe:Q (2.91) BS03 ALF ? GO:0001664 ... P50148 37532940
    843131 8jpf:R (3.02) BS01 peptide ? GO:0001659 ... P30989 37532940
    843132 8jpf:R (3.02) BS02 SRW ? GO:0001659 ... P30989 37532940
    843133 8jpg:A (6.76) BS01 CA ? GO:0016020 ... P49257 38493152
    843134 8jpg:A (6.76) BS02 CA ? GO:0016020 ... P49257 38493152
    843135 8jpg:B (6.76) BS01 CA ? GO:0016020 ... P49257 38493152
    843136 8jpg:B (6.76) BS02 CA ? GO:0016020 ... P49257 38493152
    843137 8jpg:C (6.76) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843138 8jpg:C (6.76) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843139 8jpg:C (6.76) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843140 8jpg:D (6.76) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843141 8jpg:D (6.76) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843142 8jpg:D (6.76) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843143 8jpg:E (6.76) BS01 CA ? GO:0016020 ... P49257 38493152
    843144 8jpg:E (6.76) BS02 CA ? GO:0016020 ... P49257 38493152
    843145 8jpg:F (6.76) BS01 CA ? GO:0016020 ... P49257 38493152
    843146 8jpg:F (6.76) BS02 CA ? GO:0016020 ... P49257 38493152
    843147 8jpg:G (6.76) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843148 8jpg:G (6.76) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843149 8jpg:G (6.76) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843150 8jpg:H (6.76) BS01 CA ? GO:0005509 ... Q8NI22 38493152
    843151 8jpg:H (6.76) BS02 CA ? GO:0005509 ... Q8NI22 38493152
    843152 8jpg:H (6.76) BS03 ZN ? GO:0005509 ... Q8NI22 38493152
    843153 8jpn:R (2.9) BS01 U9S 1.13.12.13 GO:0004930 ... P0ABE7
    Q9BXA5
    Q9GV45
    38744983
    843154 8jpo:A (3.4) BS01 ATP ? GO:0005247 ... P51797 N/A
    843155 8jpo:B (3.4) BS01 ATP ? GO:0005247 ... P51797 N/A
    843156 8jpq:A (2.7) BS01 V3E 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0DTD1 37609788
    843157 8jpr:A (3.4) BS01 ATP ? GO:0005247 ... P51797 N/A
    843158 8jpr:B (3.4) BS01 ATP ? GO:0005247 ... P51797 N/A
    843159 8jpw:A (2.66) BS01 FAD 1.4.3.11 GO:0016491 ... Q8L3C7 37487431
    843160 8jpw:A (2.66) BS02 AKG 1.4.3.11 GO:0016491 ... Q8L3C7 37487431
    843161 8jpx:A (2.9) BS01 dna 3.1.24.- GO:0003676 ... Q8U3D2 38295801
    843162 8jpx:A (2.9) BS02 dna 3.1.24.- GO:0003676 ... Q8U3D2 38295801
    843163 8jpx:A (2.9) BS03 dna 3.1.24.- GO:0003676 ... Q8U3D2 38295801
    843164 8jpx:A (2.9) BS04 MG 3.1.24.- GO:0003676 ... Q8U3D2 38295801
    843165 8jpx:A (2.9) BS05 MG 3.1.24.- GO:0003676 ... Q8U3D2 38295801
    843166 8jpx:B (2.9) BS01 dna 3.1.24.- GO:0003676 ... Q8U3D2 38295801
    843167 8jpx:B (2.9) BS02 dna 3.1.24.- GO:0003676 ... Q8U3D2 38295801
    843168 8jpx:B (2.9) BS03 dna 3.1.24.- GO:0003676 ... Q8U3D2 38295801
    843169 8jpx:B (2.9) BS04 MG 3.1.24.- GO:0003676 ... Q8U3D2 38295801
    843170 8jpx:B (2.9) BS05 MG 3.1.24.- GO:0003676 ... Q8U3D2 38295801
    843171 8jpy:A (-1.00) BS01 ZN N/A GO:0003700 ... Q01101 40038295
    843172 8jpy:A (-1.00) BS02 ZN N/A GO:0003700 ... Q01101 40038295
    843173 8jpz:A (2.08) BS01 FAD 1.1.3.4 GO:0016491 ... Q5Q041 N/A
    843174 8jpz:A (2.08) BS02 OXY 1.1.3.4 GO:0016491 ... Q5Q041 N/A
    843175 8jpz:B (2.08) BS01 FAD 1.1.3.4 GO:0016491 ... Q5Q041 N/A
    843176 8jpz:B (2.08) BS02 OXY 1.1.3.4 GO:0016491 ... Q5Q041 N/A
    843177 8jq0:A (2.9) BS01 dna N/A N/A Q6LCP1 N/A
    843178 8jq0:A (2.9) BS02 dna N/A N/A Q6LCP1 N/A
    843179 8jq0:A (2.9) BS03 ZN N/A N/A Q6LCP1 N/A
    843180 8jq0:A (2.9) BS04 ZN N/A N/A Q6LCP1 N/A
    843181 8jq0:D (2.9) BS01 dna N/A N/A Q6LCP1 N/A
    843182 8jq0:D (2.9) BS02 dna N/A N/A Q6LCP1 N/A
    843183 8jq0:D (2.9) BS03 ZN N/A N/A Q6LCP1 N/A
    843184 8jq0:D (2.9) BS04 ZN N/A N/A Q6LCP1 N/A
    843185 8jq1:A (-1.00) BS01 ZN N/A GO:0003700 ... Q01101 N/A
    843186 8jq1:A (-1.00) BS02 ZN N/A GO:0003700 ... Q01101 N/A
    843187 8jq3:A (1.9) BS01 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843188 8jq3:A (1.9) BS02 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843189 8jq3:B (1.9) BS01 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843190 8jq3:B (1.9) BS02 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843191 8jq3:C (1.9) BS01 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843192 8jq3:C (1.9) BS02 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843193 8jq3:D (1.9) BS01 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843194 8jq3:D (1.9) BS02 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843195 8jq4:A (1.61) BS01 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843196 8jq4:A (1.61) BS02 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843197 8jq4:A (1.61) BS03 RM4 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843198 8jq4:A (1.61) BS04 RAM 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843199 8jq4:B (1.61) BS01 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843200 8jq4:B (1.61) BS02 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).