SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    843201 8jq4:B (1.61) BS03 RM4 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843202 8jq4:C (1.61) BS01 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843203 8jq4:C (1.61) BS02 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843204 8jq4:C (1.61) BS03 RM4 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843205 8jq4:D (1.61) BS01 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843206 8jq4:D (1.61) BS02 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843207 8jq4:D (1.61) BS03 RM4 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843208 8jq4:D (1.61) BS04 RM4 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843209 8jq4:D (1.61) BS05 RAM 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843210 8jq5:A (1.73) BS01 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843211 8jq5:A (1.73) BS02 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843212 8jq5:A (1.73) BS03 PSJ 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843213 8jq5:A (1.73) BS04 PSV 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843214 8jq5:B (1.73) BS01 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843215 8jq5:B (1.73) BS02 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843216 8jq5:B (1.73) BS03 PSJ 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843217 8jq5:C (1.73) BS01 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843218 8jq5:C (1.73) BS02 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843219 8jq5:C (1.73) BS03 PSJ 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843220 8jq5:C (1.73) BS04 PSV 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843221 8jq5:C (1.73) BS05 PSV 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843222 8jq5:D (1.73) BS01 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843223 8jq5:D (1.73) BS02 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843224 8jq5:D (1.73) BS03 PSJ 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843225 8jq5:D (1.73) BS04 PSV 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843226 8jq6:A (1.71) BS01 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843227 8jq6:A (1.71) BS02 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843228 8jq6:A (1.71) BS03 ALL 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843229 8jq6:A (1.71) BS04 ALL 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843230 8jq6:B (1.71) BS01 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843231 8jq6:B (1.71) BS02 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843232 8jq6:B (1.71) BS03 ALL 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843233 8jq6:C (1.71) BS01 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843234 8jq6:C (1.71) BS02 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843235 8jq6:C (1.71) BS03 AFD 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843236 8jq6:D (1.71) BS01 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843237 8jq6:D (1.71) BS02 MN 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843238 8jq6:D (1.71) BS03 AFD 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843239 8jq6:D (1.71) BS04 ALL 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843240 8jq6:D (1.71) BS05 ALL 5.3.1.14 GO:0005737 ... A0A171J5T1 38430263
    843241 8jqe:A (2.31) BS01 MN ? GO:0005975 ... G0J5L4 38141024
    843242 8jqe:B (2.31) BS01 MN ? GO:0005975 ... G0J5L4 38141024
    843243 8jqo:A (1.6) BS01 FAD N/A GO:0071949 ... A0AAJ6N6I2 38029967
    843244 8jqo:B (1.6) BS01 FAD N/A GO:0071949 ... A0AAJ6N6I2 38029967
    843245 8jqo:C (1.6) BS01 FAD N/A GO:0071949 ... A0AAJ6N6I2 38029967
    843246 8jqo:D (1.6) BS01 FAD N/A GO:0071949 ... A0AAJ6N6I2 38029967
    843247 8jqp:A (1.65) BS01 FAD N/A GO:0071949 ... A0AAJ6N6I2 38029967
    843248 8jqp:B (1.65) BS01 FAD N/A GO:0071949 ... A0AAJ6N6I2 38029967
    843249 8jqq:A (2.06) BS01 FAD N/A GO:0071949 ... A0AAJ6N6I3 38029967
    843250 8jqq:B (2.06) BS01 FAD N/A GO:0071949 ... A0AAJ6N6I3 38029967
    843251 8jqr:A (2.75) BS01 EZI N/A GO:0000122 ... Q8NER1 39107321
    843252 8jqr:A (2.75) BS02 CLR N/A GO:0000122 ... Q8NER1 39107321
    843253 8jqr:B (2.75) BS01 EZI N/A GO:0000122 ... Q8NER1 39107321
    843254 8jqr:B (2.75) BS02 CLR N/A GO:0000122 ... Q8NER1 39107321
    843255 8jqr:C (2.75) BS01 EZI N/A GO:0000122 ... Q8NER1 39107321
    843256 8jqr:C (2.75) BS02 CLR N/A GO:0000122 ... Q8NER1 39107321
    843257 8jqr:D (2.75) BS01 EZI N/A GO:0000122 ... Q8NER1 39107321
    843258 8jqr:D (2.75) BS02 CLR N/A GO:0000122 ... Q8NER1 39107321
    843259 8jqt:A (1.99) BS01 peptide N/A N/A Q6JWQ7 N/A
    843260 8jqu:A (1.798) BS01 GNP N/A GO:0003924 ... A0A109NYM0 N/A
    843261 8jqu:A (1.798) BS02 MG N/A GO:0003924 ... A0A109NYM0 N/A
    843262 8jqz:A (3.05) BS01 GNP ? GO:0000045 ... U5NFV2 37705969
    843263 8jqz:B (3.05) BS01 GNP ? GO:0000045 ... U5NFV2 37705969
    843264 8jr0:1 (2.8) BS01 UTI ? GO:0005886 ... P9WPS1 38961288
    843265 8jr0:2 (2.8) BS01 UTI ? GO:0005886 ... P9WPS1 38961288
    843266 8jr0:4 (2.8) BS01 UTI ? GO:0005886 ... P9WPS1 38961288
    843267 8jr0:5 (2.8) BS01 UTI ? GO:0005886 ... P9WPS1 38961288
    843268 8jr0:5 (2.8) BS02 UTI ? GO:0005886 ... P9WPS1 38961288
    843269 8jr0:6 (2.8) BS01 UTI ? GO:0005886 ... P9WPS1 38961288
    843270 8jr0:6 (2.8) BS02 UTI ? GO:0005886 ... P9WPS1 38961288
    843271 8jr0:7 (2.8) BS01 UTI ? GO:0005886 ... P9WPS1 38961288
    843272 8jr0:7 (2.8) BS02 UTI ? GO:0005886 ... P9WPS1 38961288
    843273 8jr0:8 (2.8) BS01 UTI ? GO:0005886 ... P9WPS1 38961288
    843274 8jr0:8 (2.8) BS02 UTI ? GO:0005886 ... P9WPS1 38961288
    843275 8jr0:9 (2.8) BS01 UTI ? GO:0005886 ... P9WPS1 38961288
    843276 8jr0:9 (2.8) BS02 UTI ? GO:0005886 ... P9WPS1 38961288
    843277 8jr0:A (2.8) BS01 ATP 7.1.2.2 GO:0005524 ... P9WPU7 38961288
    843278 8jr0:B (2.8) BS01 ATP 7.1.2.2 GO:0005524 ... P9WPU7 38961288
    843279 8jr0:C (2.8) BS01 ATP 7.1.2.2 GO:0005524 ... P9WPU7 38961288
    843280 8jr0:C (2.8) BS02 ADP 7.1.2.2 GO:0005524 ... P9WPU7 38961288
    843281 8jr0:D (2.8) BS01 ADP 7.1.2.2 GO:0005524 ... P9WPU5 38961288
    843282 8jr0:F (2.8) BS01 ADP 7.1.2.2 GO:0005524 ... P9WPU5 38961288
    843283 8jr0:F (2.8) BS02 MG 7.1.2.2 GO:0005524 ... P9WPU5 38961288
    843284 8jr0:a (2.8) BS01 UTI ? GO:0005886 ... P9WPV7 38961288
    843285 8jr1:1 (3.17) BS01 UTI ? GO:0005886 ... P9WPS1 38961288
    843286 8jr1:2 (3.17) BS01 UTI ? GO:0005886 ... P9WPS1 38961288
    843287 8jr1:4 (3.17) BS01 UTI ? GO:0005886 ... P9WPS1 38961288
    843288 8jr1:5 (3.17) BS01 UTI ? GO:0005886 ... P9WPS1 38961288
    843289 8jr1:5 (3.17) BS02 UTI ? GO:0005886 ... P9WPS1 38961288
    843290 8jr1:6 (3.17) BS01 UTI ? GO:0005886 ... P9WPS1 38961288
    843291 8jr1:7 (3.17) BS01 UTI ? GO:0005886 ... P9WPS1 38961288
    843292 8jr1:7 (3.17) BS02 UTI ? GO:0005886 ... P9WPS1 38961288
    843293 8jr1:8 (3.17) BS01 UTI ? GO:0005886 ... P9WPS1 38961288
    843294 8jr1:8 (3.17) BS02 UTI ? GO:0005886 ... P9WPS1 38961288
    843295 8jr1:9 (3.17) BS01 UTI ? GO:0005886 ... P9WPS1 38961288
    843296 8jr1:9 (3.17) BS02 UTI ? GO:0005886 ... P9WPS1 38961288
    843297 8jr1:a (3.17) BS01 UTI ? GO:0005886 ... P9WPV7 38961288
    843298 8jr4:A (2.3) BS01 peptide N/A GO:0006955 ... A0AAT8XUA5 N/A
    843299 8jr4:B (2.3) BS01 peptide N/A GO:0006955 ... N/A N/A
    843300 8jr8:A (3.48) BS01 rna N/A GO:0003676 ... A0A316E3U6 N/A
    843301 8jr8:A (3.48) BS02 dna N/A GO:0003676 ... A0A316E3U6 N/A
    843302 8jr8:B (3.48) BS01 rna N/A GO:0007165 ... A0A316E683 N/A
    843303 8jr8:B (3.48) BS02 dna N/A GO:0007165 ... A0A316E683 N/A
    843304 8jr8:C (3.48) BS01 rna N/A GO:0003676 ... A0A316E3U6 N/A
    843305 8jr8:C (3.48) BS02 dna N/A GO:0003676 ... A0A316E3U6 N/A
    843306 8jr8:D (3.48) BS01 rna N/A GO:0007165 ... A0A316E683 N/A
    843307 8jr8:D (3.48) BS02 dna N/A GO:0007165 ... A0A316E683 N/A
    843308 8jr9:A (2.57) BS01 KHF ? GO:0003924 ... P63092
    P63096
    37524305
    843309 8jr9:R (2.57) BS01 KHF ? GO:0004888 ... Q03431 37524305
    843310 8jrd:A (1.83) BS01 COA N/A GO:0009058 ... P24826 38735137
    843311 8jrd:A (1.83) BS02 NAR N/A GO:0009058 ... P24826 38735137
    843312 8jrd:B (1.83) BS01 COA N/A GO:0009058 ... P24826 38735137
    843313 8jrd:B (1.83) BS02 NAR N/A GO:0009058 ... P24826 38735137
    843314 8jri:A (3.4) BS01 ATP N/A GO:0000502 ... P35998 41093839
    843315 8jri:B (3.4) BS01 ATP N/A GO:0000502 ... P62191 41093839
    843316 8jri:B (3.4) BS02 ATP N/A GO:0000502 ... P62191 41093839
    843317 8jri:C (3.4) BS01 ADP N/A GO:0000502 ... P62195 41093839
    843318 8jri:D (3.4) BS01 ATP N/A GO:0000502 ... P43686 41093839
    843319 8jri:E (3.4) BS01 ATP N/A GO:0000502 ... P62333 41093839
    843320 8jri:E (3.4) BS02 ATP N/A GO:0000502 ... P62333 41093839
    843321 8jri:F (3.4) BS01 ATP N/A GO:0000502 ... P17980 41093839
    843322 8jri:F (3.4) BS02 ADP N/A GO:0000502 ... P17980 41093839
    843323 8jri:F (3.4) BS03 MG N/A GO:0000502 ... P17980 41093839
    843324 8jrj:A (2.5) BS01 peptide N/A GO:0006955 ... A0AAT8XUA5 N/A
    843325 8jrj:B (2.5) BS01 peptide N/A GO:0006955 ... N/A N/A
    843326 8jrk:A (2.3) BS01 peptide N/A GO:0006955 ... A0AAT8XUA5 N/A
    843327 8jrk:B (2.3) BS01 peptide N/A GO:0006955 ... N/A N/A
    843328 8jrk:C (2.3) BS01 peptide N/A GO:0006955 ... A0AAT8XUA5 N/A
    843329 8jrk:D (2.3) BS01 peptide N/A GO:0006955 ... N/A N/A
    843330 8jrl:A (2.07) BS01 HEM ? GO:0004497 ... A0A077KEB8 N/A
    843331 8jrl:A (2.07) BS02 V3X ? GO:0004497 ... A0A077KEB8 N/A
    843332 8jrn:B (2.6) BS01 ZN ? GO:0003677 ... P03126 38670961
    843333 8jrn:B (2.6) BS02 ZN ? GO:0003677 ... P03126 38670961
    843334 8jrn:D (2.6) BS01 ZN ? GO:0003677 ... P03126 38670961
    843335 8jrn:D (2.6) BS02 ZN ? GO:0003677 ... P03126 38670961
    843336 8jro:B (3.01) BS01 ZN ? GO:0003677 ... P03126 38670961
    843337 8jro:B (3.01) BS02 ZN ? GO:0003677 ... P03126 38670961
    843338 8jro:D (3.01) BS01 ZN ? GO:0003677 ... P03126 38670961
    843339 8jro:D (3.01) BS02 ZN ? GO:0003677 ... P03126 38670961
    843340 8jrp:B (3.58) BS01 ZN ? N/A P03126 38670961
    843341 8jrp:B (3.58) BS02 ZN ? N/A P03126 38670961
    843342 8jrp:D (3.58) BS01 ZN ? N/A P03126 38670961
    843343 8jrp:D (3.58) BS02 ZN ? N/A P03126 38670961
    843344 8jrq:B (4.15) BS01 ZN ? GO:0003677 ... P03126 38670961
    843345 8jrq:B (4.15) BS02 ZN ? GO:0003677 ... P03126 38670961
    843346 8jrq:D (4.15) BS01 ZN ? GO:0003677 ... P03126 38670961
    843347 8jrq:D (4.15) BS02 ZN ? GO:0003677 ... P03126 38670961
    843348 8jrr:B (4.35) BS01 ZN ? N/A P03126 38670961
    843349 8jrr:D (4.35) BS01 ZN ? N/A P03126 38670961
    843350 8jrt:A (3.6) BS01 ATP N/A GO:0000502 ... P35998 41093839
    843351 8jrt:B (3.6) BS01 ATP N/A GO:0000502 ... P62191 41093839
    843352 8jrt:C (3.6) BS01 ADP N/A GO:0000502 ... P62195 41093839
    843353 8jrt:D (3.6) BS01 ATP N/A GO:0000502 ... P43686 41093839
    843354 8jrt:E (3.6) BS01 ATP N/A GO:0000502 ... P62333 41093839
    843355 8jrt:F (3.6) BS01 ADP N/A GO:0000502 ... P17980 41093839
    843356 8jru:R (3.5) BS01 PIO ?
    3.4.21.69
    GO:0004888 ... P03435
    P04070
    P30518
    P47871
    37558880
    843357 8jrv:A (3.3) BS01 PIO ? GO:0000139 ... P49407 37558880
    843358 8jrv:R (3.3) BS01 peptide ?
    3.4.21.69
    GO:0004888 ... P03435
    P04070
    P30518
    P47871
    37558880
    843359 8js5:A (2.95) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843360 8js5:B (2.95) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843361 8js5:C (2.95) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843362 8js5:D (2.95) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843363 8js5:E (2.95) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843364 8js5:F (2.95) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843365 8js5:G (2.95) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843366 8js5:H (2.95) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843367 8js5:I (2.95) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843368 8js5:J (2.95) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843369 8js6:A (2.7) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843370 8js6:B (2.7) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843371 8js6:C (2.7) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843372 8js6:D (2.7) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843373 8js6:E (2.7) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843374 8js6:F (2.7) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843375 8js6:G (2.7) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843376 8js6:H (2.7) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843377 8js6:I (2.7) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843378 8js6:J (2.7) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843379 8js7:A (2.85) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843380 8js7:B (2.85) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843381 8js7:C (2.85) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843382 8js7:D (2.85) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843383 8js7:E (2.85) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843384 8js7:F (2.85) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843385 8js7:G (2.85) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843386 8js7:H (2.85) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843387 8js7:I (2.85) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843388 8js7:J (2.85) BS01 HEM N/A GO:0006355 ... P23222 N/A
    843389 8js8:A (2.88) BS01 UKX ? GO:0005783 ... Q7L0J3 38637505
    843390 8js9:B (3.01) BS01 FUC ? GO:0005576 ... Q45894 38637505
    843391 8jsc:C (2.16) BS01 6FA 1.6.5.- GO:0003677 ... Q9BRQ8 37739993
    843392 8jsc:C (2.16) BS02 NAP 1.6.5.- GO:0003677 ... Q9BRQ8 37739993
    843393 8jsg:1 (4.6) BS01 rna ? GO:0002181 ... P0A7T7 38148682
    843394 8jsg:2 (4.6) BS01 rna ? GO:0003735 ... P68679 38148682
    843395 8jsg:3 (4.6) BS01 rna ? GO:0000028 ... P0A7U7 38148682
    843396 8jsg:A (4.6) BS01 rna ? GO:0003743 ... P0A707 38148682
    843397 8jsg:P (4.6) BS01 rna ? GO:0000028 ... P0AG63 38148682
    843398 8jsg:h (4.6) BS01 rna ? GO:0003676 ... P0A7V3 38148682
    843399 8jsg:j (4.6) BS01 rna ? GO:0000028 ... P0A7V0 38148682
    843400 8jsg:k (4.6) BS01 rna ? GO:0000028 ... P0A7W1 38148682

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).