SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    843201 8kaj:F (3.42) BS02 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843202 8kaj:F (3.42) BS03 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843203 8kaj:F (3.42) BS04 rna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843204 8kak:B (3.6) BS01 rna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843205 8kak:B (3.6) BS02 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843206 8kak:B (3.6) BS03 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843207 8kak:F (3.6) BS01 rna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843208 8kak:F (3.6) BS02 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843209 8kak:F (3.6) BS03 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843210 8kal:B (3.16) BS01 rna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843211 8kal:B (3.16) BS02 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843212 8kal:B (3.16) BS03 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843213 8kal:G (3.16) BS01 rna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843214 8kal:G (3.16) BS02 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843215 8kal:G (3.16) BS03 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843216 8kam:B (3.91) BS01 rna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843217 8kam:B (3.91) BS02 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843218 8kam:B (3.91) BS03 dna 3.1.-.- GO:0003677 ... Q99ZW2 38811761
    843219 8kao:C (2.55) BS01 NAD N/A GO:0000166 ... Q97Y81 N/A
    843220 8kao:C (2.55) BS02 69O N/A GO:0000166 ... Q97Y81 N/A
    843221 8kaq:A (2.13) BS01 BGC N/A GO:0004553 ... B1W1N0 N/A
    843222 8kaq:A (2.13) BS02 BGC N/A GO:0004553 ... B1W1N0 N/A
    843223 8kaq:A (2.13) BS03 BGC N/A GO:0004553 ... B1W1N0 N/A
    843224 8kaq:A (2.13) BS04 GLC N/A GO:0004553 ... B1W1N0 N/A
    843225 8kaq:B (2.13) BS01 GLC N/A GO:0004553 ... B1W1N0 N/A
    843226 8kaq:B (2.13) BS02 BGC N/A GO:0004553 ... B1W1N0 N/A
    843227 8kaq:C (2.13) BS01 BGC N/A GO:0004553 ... B1W1N0 N/A
    843228 8kaq:C (2.13) BS02 BGC N/A GO:0004553 ... B1W1N0 N/A
    843229 8kaq:C (2.13) BS03 BGC N/A GO:0004553 ... B1W1N0 N/A
    843230 8kaq:C (2.13) BS04 GLC N/A GO:0004553 ... B1W1N0 N/A
    843231 8kaq:D (2.13) BS01 BGC N/A GO:0004553 ... B1W1N0 N/A
    843232 8kar:A (1.73) BS01 AKG N/A GO:0000166 ... Q97Y81 N/A
    843233 8kar:A (1.73) BS02 NAD N/A GO:0000166 ... Q97Y81 N/A
    843234 8kar:B (1.73) BS01 AKG N/A GO:0000166 ... Q97Y81 N/A
    843235 8kar:B (1.73) BS02 NAD N/A GO:0000166 ... Q97Y81 N/A
    843236 8kar:C (1.73) BS01 AKG N/A GO:0000166 ... Q97Y81 N/A
    843237 8kar:C (1.73) BS02 NAD N/A GO:0000166 ... Q97Y81 N/A
    843238 8kb0:A (2.48) BS01 peptide N/A N/A A0A2Z4U0A8 38636758
    843239 8kb0:D (2.48) BS01 peptide N/A N/A A0A2Z4U0A8 38636758
    843240 8kb1:A (2.46) BS01 peptide N/A N/A A0A2Z4U0D0 38636758
    843241 8kb3:A (1.62) BS01 MN N/A GO:0004784 ... P43019 N/A
    843242 8kb3:B (1.62) BS01 MN N/A GO:0004784 ... P43019 N/A
    843243 8kb5:A (2.26133) BS01 dna ? GO:0000775 ... P84243 37757444
    843244 8kb5:A (2.26133) BS02 dna ? GO:0000775 ... P84243 37757444
    843245 8kb5:B (2.26133) BS01 dna ? GO:0000781 ... P62805 37757444
    843246 8kb5:B (2.26133) BS02 dna ? GO:0000781 ... P62805 37757444
    843247 8kb5:C (2.26133) BS01 dna ? GO:0000786 ... P04908 37757444
    843248 8kb5:C (2.26133) BS02 dna ? GO:0000786 ... P04908 37757444
    843249 8kb5:D (2.26133) BS01 dna ? GO:0000786 ... P06899 37757444
    843250 8kb5:D (2.26133) BS02 dna ? GO:0000786 ... P06899 37757444
    843251 8kb5:E (2.26133) BS01 dna ? GO:0000775 ... P84243 37757444
    843252 8kb5:E (2.26133) BS02 dna ? GO:0000775 ... P84243 37757444
    843253 8kb5:F (2.26133) BS01 dna ? GO:0000781 ... P62805 37757444
    843254 8kb5:F (2.26133) BS02 dna ? GO:0000781 ... P62805 37757444
    843255 8kb5:G (2.26133) BS01 dna ? GO:0000786 ... P04908 37757444
    843256 8kb5:G (2.26133) BS02 dna ? GO:0000786 ... P04908 37757444
    843257 8kb5:H (2.26133) BS01 dna ? GO:0000786 ... P06899 37757444
    843258 8kb5:H (2.26133) BS02 dna ? GO:0000786 ... P06899 37757444
    843259 8kb7:A (2.8) BS01 UDP N/A GO:0001764 ... Q8NAT1 N/A
    843260 8kb7:A (2.8) BS02 MAN N/A GO:0001764 ... Q8NAT1 N/A
    843261 8kb7:B (2.8) BS01 UDP N/A GO:0001764 ... Q8NAT1 N/A
    843262 8kb7:B (2.8) BS02 MAN N/A GO:0001764 ... Q8NAT1 N/A
    843263 8kb7:C (2.8) BS01 UDP N/A GO:0001764 ... Q8NAT1 N/A
    843264 8kb7:C (2.8) BS02 MAN N/A GO:0001764 ... Q8NAT1 N/A
    843265 8kb7:D (2.8) BS01 UDP N/A GO:0001764 ... Q8NAT1 N/A
    843266 8kb7:D (2.8) BS02 MAN N/A GO:0001764 ... Q8NAT1 N/A
    843267 8kb8:C (2.49) BS01 MG N/A GO:0003924 ... P51149 39426373
    843268 8kb8:C (2.49) BS02 GTP N/A GO:0003924 ... P51149 39426373
    843269 8kb8:D (2.49) BS01 MG N/A GO:0003924 ... P51149 39426373
    843270 8kb8:D (2.49) BS02 GTP N/A GO:0003924 ... P51149 39426373
    843271 8kbc:A (2.8) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843272 8kbc:B (2.8) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843273 8kbc:C (2.8) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843274 8kbc:D (2.8) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843275 8kbc:E (2.8) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843276 8kbc:F (2.8) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843277 8kbc:G (2.8) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843278 8kbc:H (2.8) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843279 8kbc:I (2.8) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843280 8kbc:J (2.8) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843281 8kbc:K (2.8) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843282 8kbc:L (2.8) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843283 8kbd:A (3.15) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843284 8kbd:B (3.15) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843285 8kbd:C (3.15) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843286 8kbd:D (3.15) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843287 8kbd:E (3.15) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843288 8kbd:F (3.15) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843289 8kbd:G (3.15) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843290 8kbd:H (3.15) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843291 8kbd:I (3.15) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843292 8kbd:J (3.15) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843293 8kbd:K (3.15) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843294 8kbd:L (3.15) BS01 rna N/A GO:0000166 ... P0DW61 39478223
    843295 8kbe:A (2.16) BS01 OJC N/A GO:0000166 ... P0DW58 39478223
    843296 8kbe:A (2.16) BS02 OJC N/A GO:0000166 ... P0DW58 39478223
    843297 8kbe:B (2.16) BS01 OJC N/A GO:0000166 ... P0DW58 39478223
    843298 8kbe:B (2.16) BS02 OJC N/A GO:0000166 ... P0DW58 39478223
    843299 8kbf:A (2.31) BS01 rna N/A GO:0000166 ... P0DW58 39478223
    843300 8kbf:A (2.31) BS02 OJC N/A GO:0000166 ... P0DW58 39478223
    843301 8kbf:A (2.31) BS03 OJC N/A GO:0000166 ... P0DW58 39478223
    843302 8kbf:B (2.31) BS01 rna N/A GO:0000166 ... P0DW58 39478223
    843303 8kbf:B (2.31) BS02 OJC N/A GO:0000166 ... P0DW58 39478223
    843304 8kbf:B (2.31) BS03 OJC N/A GO:0000166 ... P0DW58 39478223
    843305 8kbg:D (2.37) BS01 1SY N/A GO:0000166 ... P0DW58 39478223
    843306 8kbg:D (2.37) BS02 1SY N/A GO:0000166 ... P0DW58 39478223
    843307 8kbg:E (2.37) BS01 1SY N/A GO:0000166 ... P0DW58 39478223
    843308 8kbg:E (2.37) BS02 1SY N/A GO:0000166 ... P0DW58 39478223
    843309 8kbg:F (2.37) BS01 1SY N/A GO:0000166 ... P0DW58 39478223
    843310 8kbg:F (2.37) BS02 1SY N/A GO:0000166 ... P0DW58 39478223
    843311 8kbg:G (2.37) BS01 1SY N/A GO:0000166 ... P0DW58 39478223
    843312 8kbg:G (2.37) BS02 1SY N/A GO:0000166 ... P0DW58 39478223
    843313 8kbg:H (2.37) BS01 1SY N/A GO:0000166 ... P0DW58 39478223
    843314 8kbg:H (2.37) BS02 1SY N/A GO:0000166 ... P0DW58 39478223
    843315 8kbg:I (2.37) BS01 1SY N/A GO:0000166 ... P0DW58 39478223
    843316 8kbg:I (2.37) BS02 1SY N/A GO:0000166 ... P0DW58 39478223
    843317 8kbh:A (1.54) BS01 rna N/A GO:0000166 ... P0DW58 39478223
    843318 8kbh:A (1.54) BS02 1SY N/A GO:0000166 ... P0DW58 39478223
    843319 8kbh:A (1.54) BS03 1SY N/A GO:0000166 ... P0DW58 39478223
    843320 8kbh:B (1.54) BS01 1SY N/A GO:0000166 ... P0DW58 39478223
    843321 8kbh:B (1.54) BS02 1SY N/A GO:0000166 ... P0DW58 39478223
    843322 8kbh:C (1.54) BS01 1SY N/A GO:0000166 ... P0DW58 39478223
    843323 8kbh:D (1.54) BS01 rna N/A GO:0000166 ... P0DW58 39478223
    843324 8kbh:D (1.54) BS02 1SY N/A GO:0000166 ... P0DW58 39478223
    843325 8kbh:D (1.54) BS03 1SY N/A GO:0000166 ... P0DW58 39478223
    843326 8kbh:E (1.54) BS01 rna N/A GO:0000166 ... P0DW58 39478223
    843327 8kbh:E (1.54) BS02 1SY N/A GO:0000166 ... P0DW58 39478223
    843328 8kbh:E (1.54) BS03 1SY N/A GO:0000166 ... P0DW58 39478223
    843329 8kbh:F (1.54) BS01 rna N/A GO:0000166 ... P0DW58 39478223
    843330 8kbh:F (1.54) BS02 1SY N/A GO:0000166 ... P0DW58 39478223
    843331 8kbh:F (1.54) BS03 1SY N/A GO:0000166 ... P0DW58 39478223
    843332 8kbh:G (1.54) BS01 rna N/A GO:0000166 ... P0DW58 39478223
    843333 8kbh:G (1.54) BS02 1SY N/A GO:0000166 ... P0DW58 39478223
    843334 8kbh:G (1.54) BS03 1SY N/A GO:0000166 ... P0DW58 39478223
    843335 8kbh:H (1.54) BS01 rna N/A GO:0000166 ... P0DW58 39478223
    843336 8kbh:H (1.54) BS02 1SY N/A GO:0000166 ... P0DW58 39478223
    843337 8kbh:H (1.54) BS03 1SY N/A GO:0000166 ... P0DW58 39478223
    843338 8kbh:I (1.54) BS01 rna N/A GO:0000166 ... P0DW58 39478223
    843339 8kbh:I (1.54) BS02 1SY N/A GO:0000166 ... P0DW58 39478223
    843340 8kbh:I (1.54) BS03 1SY N/A GO:0000166 ... P0DW58 39478223
    843341 8kbj:A (2.1) BS01 MF6 N/A GO:0000166 ... A0A447EB45 39478223
    843342 8kbj:B (2.1) BS01 MF6 N/A GO:0000166 ... A0A447EB45 39478223
    843343 8kbj:C (2.1) BS01 MF6 N/A GO:0000166 ... A0A447EB45 39478223
    843344 8kbj:D (2.1) BS01 MF6 N/A GO:0000166 ... A0A447EB45 39478223
    843345 8kbk:A (2.28) BS01 MF6 N/A GO:0000166 ... A0A447EB45 39478223
    843346 8kbk:A (2.28) BS02 C2E N/A GO:0000166 ... A0A447EB45 39478223
    843347 8kbk:B (2.28) BS01 MF6 N/A GO:0000166 ... A0A447EB45 39478223
    843348 8kbk:B (2.28) BS02 C2E N/A GO:0000166 ... A0A447EB45 39478223
    843349 8kbk:C (2.28) BS01 MF6 N/A GO:0000166 ... A0A447EB45 39478223
    843350 8kbk:C (2.28) BS02 C2E N/A GO:0000166 ... A0A447EB45 39478223
    843351 8kbk:D (2.28) BS01 C2E N/A GO:0000166 ... A0A447EB45 39478223
    843352 8kbk:D (2.28) BS02 MF6 N/A GO:0000166 ... A0A447EB45 39478223
    843353 8kbl:A (1.98) BS01 OJC N/A GO:0000166 ... A0A447EB45 39478223
    843354 8kbl:A (1.98) BS02 C2E N/A GO:0000166 ... A0A447EB45 39478223
    843355 8kbm:A (1.38) BS01 C2E N/A GO:0000166 ... A0A447EB45 39478223
    843356 8kbm:B (1.38) BS01 C2E N/A GO:0000166 ... A0A447EB45 39478223
    843357 8kc2:A (2.6) BS01 ZN 3.4.-.-
    3.4.17.23
    GO:0006508 ... A0A1U7QTA1 38305152
    843358 8kc9:A (3.75) BS01 FE N/A GO:0005506 ... Q32P28 39245686
    843359 8kc9:C (3.75) BS01 peptide N/A GO:0000413 ... P23284 39245686
    843360 8kcb:A (3.17) BS01 dna N/A GO:0000786 ... Q9LD28 38870940
    843361 8kcb:A (3.17) BS02 dna N/A GO:0000786 ... Q9LD28 38870940
    843362 8kcb:B (3.17) BS01 dna N/A GO:0000786 ... Q9LD28 38870940
    843363 8kcb:B (3.17) BS02 dna N/A GO:0000786 ... Q9LD28 38870940
    843364 8kcb:C (3.17) BS01 dna N/A GO:0000786 ... Q9FFC0 38870940
    843365 8kcb:C (3.17) BS02 dna N/A GO:0000786 ... Q9FFC0 38870940
    843366 8kcb:D (3.17) BS01 dna N/A GO:0000786 ... Q9FFC0 38870940
    843367 8kcb:D (3.17) BS02 dna N/A GO:0000786 ... Q9FFC0 38870940
    843368 8kcb:E (3.17) BS01 dna N/A GO:0000786 ... P59226 38870940
    843369 8kcb:E (3.17) BS02 dna N/A GO:0000786 ... P59226 38870940
    843370 8kcb:F (3.17) BS01 dna N/A GO:0000786 ... P59226 38870940
    843371 8kcb:F (3.17) BS02 dna N/A GO:0000786 ... P59226 38870940
    843372 8kcb:G (3.17) BS01 dna N/A GO:0000325 ... P59259 38870940
    843373 8kcb:G (3.17) BS02 dna N/A GO:0000325 ... P59259 38870940
    843374 8kcb:H (3.17) BS01 dna N/A GO:0000325 ... P59259 38870940
    843375 8kcb:H (3.17) BS02 dna N/A GO:0000325 ... P59259 38870940
    843376 8kcb:K (3.17) BS01 dna N/A GO:0000786 ... Q9XFH4 38870940
    843377 8kcb:K (3.17) BS02 dna N/A GO:0000786 ... Q9XFH4 38870940
    843378 8kcb:K (3.17) BS03 BEF N/A GO:0000786 ... Q9XFH4 38870940
    843379 8kcb:K (3.17) BS04 ADP N/A GO:0000786 ... Q9XFH4 38870940
    843380 8kcc:A (3.1) BS01 dna N/A GO:0000786 ... Q9FJE8 38870940
    843381 8kcc:A (3.1) BS02 dna N/A GO:0000786 ... Q9FJE8 38870940
    843382 8kcc:B (3.1) BS01 dna N/A GO:0000786 ... Q9FJE8 38870940
    843383 8kcc:B (3.1) BS02 dna N/A GO:0000786 ... Q9FJE8 38870940
    843384 8kcc:C (3.1) BS01 dna N/A GO:0000786 ... Q9FFC0 38870940
    843385 8kcc:C (3.1) BS02 dna N/A GO:0000786 ... Q9FFC0 38870940
    843386 8kcc:D (3.1) BS01 dna N/A GO:0000786 ... Q9FFC0 38870940
    843387 8kcc:D (3.1) BS02 dna N/A GO:0000786 ... Q9FFC0 38870940
    843388 8kcc:E (3.1) BS01 dna N/A GO:0000786 ... P59226 38870940
    843389 8kcc:E (3.1) BS02 dna N/A GO:0000786 ... P59226 38870940
    843390 8kcc:F (3.1) BS01 dna N/A GO:0000786 ... P59226 38870940
    843391 8kcc:F (3.1) BS02 dna N/A GO:0000786 ... P59226 38870940
    843392 8kcc:G (3.1) BS01 dna N/A GO:0000325 ... P59259 38870940
    843393 8kcc:G (3.1) BS02 dna N/A GO:0000325 ... P59259 38870940
    843394 8kcc:H (3.1) BS01 dna N/A GO:0000325 ... P59259 38870940
    843395 8kcc:H (3.1) BS02 dna N/A GO:0000325 ... P59259 38870940
    843396 8kcc:K (3.1) BS01 dna N/A GO:0000786 ... Q9XFH4 38870940
    843397 8kcc:K (3.1) BS02 dna N/A GO:0000786 ... Q9XFH4 38870940
    843398 8kcc:K (3.1) BS03 ADP N/A GO:0000786 ... Q9XFH4 38870940
    843399 8kcc:K (3.1) BS04 BEF N/A GO:0000786 ... Q9XFH4 38870940
    843400 8kce:A (1.05) BS01 ZN N/A N/A A0A1D1V463 39417615

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).