SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    843401 8jsg:l (4.6) BS01 rna ? GO:0000028 ... P0A7V8 38148682
    843402 8jsg:m (4.6) BS01 rna ? GO:0003723 ... P02359 38148682
    843403 8jsg:n (4.6) BS01 rna ? GO:0003735 ... P02358 38148682
    843404 8jsg:o (4.6) BS01 rna ? GO:0002181 ... P0A7X3 38148682
    843405 8jsg:p (4.6) BS01 rna ? GO:0000028 ... P0A7W7 38148682
    843406 8jsg:q (4.6) BS01 rna ? GO:0002181 ... P0A7R9 38148682
    843407 8jsg:r (4.6) BS01 rna ? GO:0000049 ... P0A7R5 38148682
    843408 8jsg:s (4.6) BS01 rna ? GO:0000049 ... P0A7S9 38148682
    843409 8jsg:t (4.6) BS01 rna ? GO:0000049 ... P0A7S3 38148682
    843410 8jsg:u (4.6) BS01 rna ? GO:0000028 ... P0ADZ4 38148682
    843411 8jsg:w (4.6) BS01 rna ? GO:0000028 ... P0AG59 38148682
    843412 8jsg:y (4.6) BS01 rna ? GO:0000028 ... P0A7T3 38148682
    843413 8jsg:z (4.6) BS01 rna ? GO:0003723 ... P0A7U3 38148682
    843414 8jsh:1 (4.4) BS01 rna ? GO:0002181 ... P0A7T7 38148682
    843415 8jsh:2 (4.4) BS01 rna ? GO:0000028 ... P68679 38148682
    843416 8jsh:3 (4.4) BS01 rna ? GO:0000028 ... P0A7U7 38148682
    843417 8jsh:A (4.4) BS01 rna ? GO:0003743 ... P0A707 38148682
    843418 8jsh:P (4.4) BS01 rna ? GO:0000028 ... P0AG63 38148682
    843419 8jsh:k (4.4) BS01 rna ? GO:0000028 ... P0A7W1 38148682
    843420 8jsh:l (4.4) BS01 rna ? GO:0000028 ... P0A7V8 38148682
    843421 8jsh:n (4.4) BS01 rna ? GO:0002181 ... P02358 38148682
    843422 8jsh:p (4.4) BS01 rna ? GO:0000028 ... P0A7W7 38148682
    843423 8jsh:q (4.4) BS01 rna ? GO:0002181 ... P0A7R9 38148682
    843424 8jsh:t (4.4) BS01 rna ? GO:0000049 ... P0A7S3 38148682
    843425 8jsh:u (4.4) BS01 rna ? GO:0000028 ... P0ADZ4 38148682
    843426 8jsh:y (4.4) BS01 rna ? GO:0000028 ... P0A7T3 38148682
    843427 8jsi:A (2.9) BS01 dna N/A GO:0003676 ... A0A0Q2M2Z1 N/A
    843428 8jsi:A (2.9) BS02 dna N/A GO:0003676 ... A0A0Q2M2Z1 N/A
    843429 8jsi:A (2.9) BS03 ZN N/A GO:0003676 ... A0A0Q2M2Z1 N/A
    843430 8jsi:A (2.9) BS04 MG N/A GO:0003676 ... A0A0Q2M2Z1 N/A
    843431 8jsi:B (2.9) BS01 dna N/A GO:0003676 ... A0A0Q2M2Z1 N/A
    843432 8jsi:B (2.9) BS02 dna N/A GO:0003676 ... A0A0Q2M2Z1 N/A
    843433 8jsi:B (2.9) BS03 ZN N/A GO:0003676 ... A0A0Q2M2Z1 N/A
    843434 8jsi:B (2.9) BS04 MG N/A GO:0003676 ... A0A0Q2M2Z1 N/A
    843435 8jsk:A (2.401) BS01 6SY N/A GO:0005249 ... A0ACD6BAZ5 38965224
    843436 8jsl:A (2.95) BS01 rna 2.1.1.-
    2.1.1.375
    2.7.7.48
    2.7.7.88
    3.6.1.-
    GO:0000166 ... A0A1C4HDB0 37699521
    843437 8jsl:A (2.95) BS02 ZN 2.1.1.-
    2.1.1.375
    2.7.7.48
    2.7.7.88
    3.6.1.-
    GO:0000166 ... A0A1C4HDB0 37699521
    843438 8jsm:A (3.3) BS01 rna 2.1.1.-
    2.1.1.375
    2.7.7.48
    2.7.7.88
    3.6.1.-
    GO:0000166 ... A0A1C4HDB0 37699521
    843439 8jsm:A (3.3) BS02 ZN 2.1.1.-
    2.1.1.375
    2.7.7.48
    2.7.7.88
    3.6.1.-
    GO:0000166 ... A0A1C4HDB0 37699521
    843440 8jsn:A (3.4) BS01 rna 2.1.1.-
    2.1.1.375
    2.7.7.48
    2.7.7.88
    3.6.1.-
    GO:0000166 ... A0A1C4HDB0 37699521
    843441 8jsn:A (3.4) BS02 ZN 2.1.1.-
    2.1.1.375
    2.7.7.48
    2.7.7.88
    3.6.1.-
    GO:0000166 ... A0A1C4HDB0 37699521
    843442 8jso:R (3.4) BS01 1WE ? GO:0001594 ... P0ABE7
    Q96RJ0
    37935376
    843443 8jsp:R (3.65) BS01 UJL ? GO:0001586 ... P08908 37935376
    843444 8jsr:R (2.9) BS01 UYI N/A GO:0001616 ... Q92847 39833471
    843445 8jsv:A (2.55) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843446 8jsv:B (2.55) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843447 8jsv:C (2.55) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843448 8jsv:D (2.55) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843449 8jsv:E (2.55) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843450 8jsv:F (2.55) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843451 8jsv:G (2.55) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843452 8jsv:H (2.55) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843453 8jsv:I (2.55) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843454 8jsv:J (2.55) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843455 8jsw:A (2.84) BS01 SRO ? GO:0022857 ... Q05940 38081299
    843456 8jsx:A (3.16) BS01 E5E ? GO:0022857 ... Q05940 38777861
    843457 8jsy:A (2.55) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843458 8jsy:B (2.55) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843459 8jsy:C (2.55) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843460 8jsy:D (2.55) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843461 8jsy:E (2.55) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843462 8jsy:F (2.55) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843463 8jsy:G (2.55) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843464 8jsy:H (2.55) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843465 8jsy:I (2.55) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843466 8jsy:J (2.55) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843467 8jsz:A (1.83) BS01 ZN N/A N/A A0ACD6BAV8 38965224
    843468 8jsz:B (1.83) BS01 ZN N/A N/A A0ACD6BAV8 38965224
    843469 8jt0:A (2.2) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843470 8jt0:B (2.2) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843471 8jt0:C (2.2) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843472 8jt0:D (2.2) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843473 8jt0:E (2.2) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843474 8jt0:F (2.2) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843475 8jt0:G (2.2) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843476 8jt0:H (2.2) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843477 8jt0:I (2.2) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843478 8jt0:J (2.2) BS01 NAP N/A GO:0008703 ... A0AA40WBR8 39824401
    843479 8jt1:A (2.0) BS01 peptide 3.4.24.3 GO:0004222 ... F7IZI6 37698340
    843480 8jt1:A (2.0) BS02 peptide 3.4.24.3 GO:0004222 ... F7IZI6 37698340
    843481 8jt1:A (2.0) BS03 peptide 3.4.24.3 GO:0004222 ... F7IZI6 37698340
    843482 8jt1:A (2.0) BS04 ZN 3.4.24.3 GO:0004222 ... F7IZI6 37698340
    843483 8jt1:A (2.0) BS05 CA 3.4.24.3 GO:0004222 ... F7IZI6 37698340
    843484 8jt1:A (2.0) BS06 CA 3.4.24.3 GO:0004222 ... F7IZI6 37698340
    843485 8jt1:A (2.0) BS07 CA 3.4.24.3 GO:0004222 ... F7IZI6 37698340
    843486 8jt1:A (2.0) BS08 CA 3.4.24.3 GO:0004222 ... F7IZI6 37698340
    843487 8jt1:B (2.0) BS01 peptide 3.4.24.3 GO:0004222 ... F7IZI6 37698340
    843488 8jt1:B (2.0) BS02 peptide 3.4.24.3 GO:0004222 ... F7IZI6 37698340
    843489 8jt1:B (2.0) BS03 peptide 3.4.24.3 GO:0004222 ... F7IZI6 37698340
    843490 8jt1:B (2.0) BS04 ZN 3.4.24.3 GO:0004222 ... F7IZI6 37698340
    843491 8jt1:B (2.0) BS05 CA 3.4.24.3 GO:0004222 ... F7IZI6 37698340
    843492 8jt1:B (2.0) BS06 CA 3.4.24.3 GO:0004222 ... F7IZI6 37698340
    843493 8jt1:B (2.0) BS07 CA 3.4.24.3 GO:0004222 ... F7IZI6 37698340
    843494 8jt1:B (2.0) BS08 CA 3.4.24.3 GO:0004222 ... F7IZI6 37698340
    843495 8jt3:A (2.35) BS01 EQJ ? GO:0008483 ... H8Y6N2 37451216
    843496 8jt3:A (2.35) BS02 EQJ ? GO:0008483 ... H8Y6N2 37451216
    843497 8jt3:B (2.35) BS01 EQJ ? GO:0008483 ... H8Y6N2 37451216
    843498 8jt3:B (2.35) BS02 EQJ ? GO:0008483 ... H8Y6N2 37451216
    843499 8jt3:C (2.35) BS01 EQJ ? GO:0008483 ... H8Y6N2 37451216
    843500 8jt3:C (2.35) BS02 EQJ ? GO:0008483 ... H8Y6N2 37451216
    843501 8jt3:D (2.35) BS01 EQJ ? GO:0008483 ... H8Y6N2 37451216
    843502 8jt3:D (2.35) BS02 EQJ ? GO:0008483 ... H8Y6N2 37451216
    843503 8jt5:A (3.06) BS01 HSM ? GO:0022857 ... Q05940 38777861
    843504 8jt6:R (3.0) BS01 CLR ? GO:0001586 ... P08908
    P0ABE7
    38552625
    843505 8jt6:R (3.0) BS02 CLR ? GO:0001586 ... P08908
    P0ABE7
    38552625
    843506 8jt6:R (3.0) BS03 J40 ? GO:0001586 ... P08908
    P0ABE7
    38552625
    843507 8jt6:R (3.0) BS04 EZX ? GO:0001586 ... P08908
    P0ABE7
    38552625
    843508 8jt7:A (2.34) BS01 FAD N/A GO:0001716 ... A0A177SH44 39420599
    843509 8jt8:A (2.7) BS01 MG ? GO:0004930 ... P0ABE7
    P28223
    38552625
    843510 8jt8:A (2.7) BS02 EZX ? GO:0004930 ... P0ABE7
    P28223
    38552625
    843511 8jt8:A (2.7) BS03 CLR ? GO:0004930 ... P0ABE7
    P28223
    38552625
    843512 8jt8:A (2.7) BS04 CLR ? GO:0004930 ... P0ABE7
    P28223
    38552625
    843513 8jt9:A (2.97) BS01 UYX ? GO:0022857 ... Q05940 38081299
    843514 8jta:A (3.36) BS01 YHL ? GO:0022857 ... Q05940 38081299
    843515 8jtb:A (2.93) BS01 LDP ? GO:0022857 ... Q05940 38777861
    843516 8jtc:A (3.52) BS01 YHR ? GO:0022857 ... Q05940 38081299
    843517 8jtd:J (4.9) BS01 BMA N/A N/A N/A 38665238
    843518 8jtd:J (4.9) BS02 MAN N/A N/A N/A 38665238
    843519 8jtd:N (4.9) BS01 MAN N/A N/A N/A 38665238
    843520 8jti:A (3.8) BS01 ATP N/A GO:0000502 ... P35998 41093839
    843521 8jti:B (3.8) BS01 ATP N/A GO:0000502 ... P62191 41093839
    843522 8jti:B (3.8) BS02 ATP N/A GO:0000502 ... P62191 41093839
    843523 8jti:C (3.8) BS01 ADP N/A GO:0000502 ... P62195 41093839
    843524 8jti:D (3.8) BS01 ATP N/A GO:0000502 ... P43686 41093839
    843525 8jti:E (3.8) BS01 ATP N/A GO:0000502 ... P62333 41093839
    843526 8jti:F (3.8) BS01 ATP N/A GO:0000502 ... P17980 41093839
    843527 8jti:F (3.8) BS02 ADP N/A GO:0000502 ... P17980 41093839
    843528 8jti:F (3.8) BS03 MG N/A GO:0000502 ... P17980 41093839
    843529 8jtj:A (3.08) BS01 rna 3.1.-.- GO:0003676 ... A0A150MP45 N/A
    843530 8jtj:A (3.08) BS02 dna 3.1.-.- GO:0003676 ... A0A150MP45 N/A
    843531 8jtj:A (3.08) BS03 dna 3.1.-.- GO:0003676 ... A0A150MP45 N/A
    843532 8jtm:J (5.14) BS01 BMA N/A N/A N/A 38665238
    843533 8jtm:J (5.14) BS02 MAN N/A N/A N/A 38665238
    843534 8jtn:A (1.8) BS01 F5W ? N/A Q9H7E2 37499935
    843535 8jtn:A (1.8) BS02 F5W ? N/A Q9H7E2 37499935
    843536 8jtn:A (1.8) BS03 F5W ? N/A Q9H7E2 37499935
    843537 8jto:A (2.25) BS01 C8E N/A GO:0009279 ... A0A069BCC8 N/A
    843538 8jto:A (2.25) BS02 C8E N/A GO:0009279 ... A0A069BCC8 N/A
    843539 8jtr:A (3.21) BS01 rna 3.1.-.- GO:0003676 ... A0A150MP45 N/A
    843540 8jtt:A (3.87) BS01 MF8 ? GO:0005277 ... O15245 38485705
    843541 8jtv:A (3.77) BS01 MF8 ? GO:0005277 ... O15245 38485705
    843542 8jtz:A (3.27) BS01 SNL ? GO:0005277 ... O15245 38485705
    843543 8ju0:A (2.98) BS01 SNL ? GO:0005277 ... O15245 38485705
    843544 8ju4:A (2.3) BS01 FAD N/A GO:0008202 ... Q9RA02 N/A
    843545 8ju4:A (2.3) BS02 ANB N/A GO:0008202 ... Q9RA02 N/A
    843546 8ju5:B (3.74) BS01 F3L ? GO:0000122 ... Q9HBA0 38659239
    843547 8ju5:D (3.74) BS01 F3L ? GO:0000122 ... Q9HBA0 38659239
    843548 8ju6:A (3.45) BS01 XPW ? GO:0000122 ... Q9HBA0 38659239
    843549 8ju6:B (3.45) BS01 XPW ? GO:0000122 ... Q9HBA0 38659239
    843550 8ju6:C (3.45) BS01 XPW ? GO:0000122 ... Q9HBA0 38659239
    843551 8ju6:D (3.45) BS01 XPW ? GO:0000122 ... Q9HBA0 38659239
    843552 8ju9:A (2.0) BS01 KDP ? GO:0003677 ... Q9HTC8 38477394
    843553 8jua:A (2.00001) BS01 HEM ? GO:0004497 ... A0A0B4ZV78 37917570
    843554 8jua:A (2.00001) BS02 F7Z ? GO:0004497 ... A0A0B4ZV78 37917570
    843555 8jua:B (2.00001) BS01 HEM ? GO:0004497 ... A0A0B4ZV78 37917570
    843556 8jua:B (2.00001) BS02 F7Z ? GO:0004497 ... A0A0B4ZV78 37917570
    843557 8jub:A (2.01) BS01 V4I 3.5.1.2 GO:0004359 ... O94925 37849538
    843558 8jub:B (2.01) BS01 V4I 3.5.1.2 GO:0004359 ... O94925 37849538
    843559 8jub:C (2.01) BS01 V4I 3.5.1.2 GO:0004359 ... O94925 37849538
    843560 8jub:D (2.01) BS01 V4I 3.5.1.2 GO:0004359 ... O94925 37849538
    843561 8juc:A (1.54) BS01 V23 2.3.2.23 N/A Q9NPD8 38358126
    843562 8jud:A (1.5) BS01 peptide 3.4.24.23 GO:0004222 ... P09237 37861435
    843563 8jud:A (1.5) BS02 CA 3.4.24.23 GO:0004222 ... P09237 37861435
    843564 8jud:A (1.5) BS03 CA 3.4.24.23 GO:0004222 ... P09237 37861435
    843565 8jud:A (1.5) BS04 ZN 3.4.24.23 GO:0004222 ... P09237 37861435
    843566 8jud:A (1.5) BS05 ZN 3.4.24.23 GO:0004222 ... P09237 37861435
    843567 8jue:A (2.39) BS01 V59 3.5.1.2 GO:0004359 ... O94925 37849538
    843568 8jue:B (2.39) BS01 V59 3.5.1.2 GO:0004359 ... O94925 37849538
    843569 8jue:C (2.39) BS01 V59 3.5.1.2 GO:0004359 ... O94925 37849538
    843570 8jue:D (2.39) BS01 V59 3.5.1.2 GO:0004359 ... O94925 37849538
    843571 8juf:A (1.39) BS01 peptide 3.4.24.23 GO:0004222 ... P09237 37861435
    843572 8juf:A (1.39) BS02 CA 3.4.24.23 GO:0004222 ... P09237 37861435
    843573 8juf:A (1.39) BS03 CA 3.4.24.23 GO:0004222 ... P09237 37861435
    843574 8juf:A (1.39) BS04 ZN 3.4.24.23 GO:0004222 ... P09237 37861435
    843575 8juf:A (1.39) BS05 ZN 3.4.24.23 GO:0004222 ... P09237 37861435
    843576 8jug:A (1.3) BS01 peptide 3.4.24.23 GO:0004222 ... P09237 37861435
    843577 8jug:A (1.3) BS02 CA 3.4.24.23 GO:0004222 ... P09237 37861435
    843578 8jug:A (1.3) BS03 CA 3.4.24.23 GO:0004222 ... P09237 37861435
    843579 8jug:A (1.3) BS04 ZN 3.4.24.23 GO:0004222 ... P09237 37861435
    843580 8jug:A (1.3) BS05 ZN 3.4.24.23 GO:0004222 ... P09237 37861435
    843581 8jui:A (2.2) BS01 PLP N/A GO:0003824 ... Q818J6 39644606
    843582 8juj:A (1.99) BS01 PLP N/A GO:0003824 ... Q816F3 39644606
    843583 8juj:B (1.99) BS01 PLP N/A GO:0003824 ... Q816F3 39644606
    843584 8juj:B (1.99) BS02 PLP N/A GO:0003824 ... Q816F3 39644606
    843585 8jul:A (2.92) BS01 ZN ? GO:0016020 ... Q9NXL6 37932444
    843586 8jul:B (2.92) BS01 ZN ? GO:0016020 ... Q9NXL6 37932444
    843587 8jun:A (2.38) BS01 ZN ? GO:0016020 ... Q9NXL6 37932444
    843588 8jun:B (2.38) BS01 ZN ? GO:0016020 ... Q9NXL6 37932444
    843589 8jup:A (1.98) BS01 ATP 2.7.11.1 GO:0004672 ... Q0JA29 N/A
    843590 8juq:A (2.21) BS01 C8E N/A GO:0009279 ... L0RVU0 N/A
    843591 8juq:A (2.21) BS02 C8E N/A GO:0009279 ... L0RVU0 N/A
    843592 8juq:B (2.21) BS01 C8E N/A GO:0009279 ... L0RVU0 N/A
    843593 8juq:B (2.21) BS02 C8E N/A GO:0009279 ... L0RVU0 N/A
    843594 8juq:C (2.21) BS01 C8E N/A GO:0009279 ... L0RVU0 N/A
    843595 8juq:C (2.21) BS02 C8E N/A GO:0009279 ... L0RVU0 N/A
    843596 8juq:C (2.21) BS03 C8E N/A GO:0009279 ... L0RVU0 N/A
    843597 8juq:G (2.21) BS01 C8E N/A GO:0009279 ... L0RVU0 N/A
    843598 8juq:H (2.21) BS01 C8E N/A GO:0009279 ... L0RVU0 N/A
    843599 8jur:A (2.92) BS01 C8E N/A GO:0009279 ... L0RVU0 N/A
    843600 8jur:A (2.92) BS02 LLL N/A GO:0009279 ... L0RVU0 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).