SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4208 4209 4210 4211 4212 4213 4214 4215 4216 4217 4218 4219 4220 4221 4222 4223 4224 4225 4226 4227 4228 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    843401 8kce:A (1.05) BS02 MG N/A N/A A0A1D1V463 39417615
    843402 8kci:A (3.94) BS01 ATP N/A GO:0005524 ... O15440 38844452
    843403 8kci:A (3.94) BS02 ATP N/A GO:0005524 ... O15440 38844452
    843404 8kci:A (3.94) BS03 MG N/A GO:0005524 ... O15440 38844452
    843405 8kci:A (3.94) BS04 MG N/A GO:0005524 ... O15440 38844452
    843406 8kcm:A (2.5) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033054
    843407 8kcm:A (2.5) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033054
    843408 8kcm:A (2.5) BS03 FAD 4.1.99.3 GO:0000166 ... Q8PYK9 38033054
    843409 8kcm:B (2.5) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033054
    843410 8kcm:B (2.5) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033054
    843411 8kcm:B (2.5) BS03 FAD 4.1.99.3 GO:0000166 ... Q8PYK9 38033054
    843412 8kco:B (2.8) BS01 N60 N/A GO:0000045 ... P49768 39653842
    843413 8kco:C (2.8) BS01 CLR N/A GO:0000139 ... Q96BI3 39653842
    843414 8kco:C (2.8) BS02 CLR N/A GO:0000139 ... Q96BI3 39653842
    843415 8kcp:B (3.0) BS01 N9C N/A GO:0000045 ... P49768 39653842
    843416 8kcp:C (3.0) BS01 CLR N/A GO:0000139 ... Q96BI3 39653842
    843417 8kcp:C (3.0) BS02 CLR N/A GO:0000139 ... Q96BI3 39653842
    843418 8kcp:C (3.0) BS03 CLR N/A GO:0000139 ... Q96BI3 39653842
    843419 8kcs:B (2.4) BS01 Q70 N/A GO:0000045 ... P49768 39653842
    843420 8kcs:C (2.4) BS01 CLR N/A GO:0000139 ... Q96BI3 39653842
    843421 8kcs:C (2.4) BS02 CLR N/A GO:0000139 ... Q96BI3 39653842
    843422 8kcs:C (2.4) BS03 CLR N/A GO:0000139 ... Q96BI3 39653842
    843423 8kct:B (2.6) BS01 O6U N/A GO:0000045 ... P49768 39653842
    843424 8kct:C (2.6) BS01 CLR N/A GO:0000139 ... Q96BI3 39653842
    843425 8kct:C (2.6) BS02 CLR N/A GO:0000139 ... Q96BI3 39653842
    843426 8kct:C (2.6) BS03 CLR N/A GO:0000139 ... Q96BI3 39653842
    843427 8kcu:B (2.7) BS01 OL9 N/A GO:0000045 ... P49768 39653842
    843428 8kcu:C (2.7) BS01 CLR N/A GO:0000139 ... Q96BI3 39653842
    843429 8kcu:C (2.7) BS02 CLR N/A GO:0000139 ... Q96BI3 39653842
    843430 8kcu:C (2.7) BS03 CLR N/A GO:0000139 ... Q96BI3 39653842
    843431 8kcv:A (2.39) BS01 peptide N/A N/A Q6I7L1 N/A
    843432 8kcv:D (2.39) BS01 peptide N/A N/A Q6I7L1 N/A
    843433 8kcw:A (2.77) BS01 ZN ? GO:0016020 ... Q9NXL6 38811802
    843434 8kcw:A (2.77) BS02 CLR ? GO:0016020 ... Q9NXL6 38811802
    843435 8kcw:A (2.77) BS03 CLR ? GO:0016020 ... Q9NXL6 38811802
    843436 8kcw:C (2.77) BS01 ZN ? GO:0016020 ... Q9NXL6 38811802
    843437 8kcw:C (2.77) BS02 CLR ? GO:0016020 ... Q9NXL6 38811802
    843438 8kcw:C (2.77) BS03 CLR ? GO:0016020 ... Q9NXL6 38811802
    843439 8kcx:A (2.96) BS01 ZN ? GO:0016020 ... Q9NXL6 38811802
    843440 8kcx:C (2.96) BS01 ZN ? GO:0016020 ... Q9NXL6 38811802
    843441 8kcz:A (2.3) BS01 FAD 1.3.99.4 GO:0000166 ... Q9RA02 N/A
    843442 8kcz:A (2.3) BS02 ANB 1.3.99.4 GO:0000166 ... Q9RA02 N/A
    843443 8kd0:A (1.675) BS01 GAL N/A GO:0042597 ... Q4FMK2 39261732
    843444 8kd2:E (3.02) BS01 peptide ? GO:0000118 ... Q04779 37666978
    843445 8kd2:E (3.02) BS02 peptide ? GO:0000118 ... Q04779 37666978
    843446 8kd2:O (3.02) BS01 dna ? GO:0000786 ... P84233 37666978
    843447 8kd2:O (3.02) BS02 dna ? GO:0000786 ... P84233 37666978
    843448 8kd2:P (3.02) BS01 dna ? GO:0000786 ... P62799 37666978
    843449 8kd2:P (3.02) BS02 dna ? GO:0000786 ... P62799 37666978
    843450 8kd2:Q (3.02) BS01 dna ? GO:0000786 ... P06897 37666978
    843451 8kd2:Q (3.02) BS02 dna ? GO:0000786 ... P06897 37666978
    843452 8kd2:R (3.02) BS01 dna ? GO:0000786 ... P02281 37666978
    843453 8kd2:R (3.02) BS02 dna ? GO:0000786 ... P02281 37666978
    843454 8kd2:S (3.02) BS01 dna ? GO:0000786 ... P84233 37666978
    843455 8kd2:S (3.02) BS02 dna ? GO:0000786 ... P84233 37666978
    843456 8kd2:T (3.02) BS01 dna ? GO:0000786 ... P62799 37666978
    843457 8kd2:T (3.02) BS02 dna ? GO:0000786 ... P62799 37666978
    843458 8kd2:U (3.02) BS01 dna ? GO:0000786 ... P06897 37666978
    843459 8kd2:U (3.02) BS02 dna ? GO:0000786 ... P06897 37666978
    843460 8kd2:V (3.02) BS01 dna ? GO:0000786 ... P02281 37666978
    843461 8kd2:V (3.02) BS02 dna ? GO:0000786 ... P02281 37666978
    843462 8kd3:B (2.9) BS01 dna ? GO:0000086 ... P22579 37666978
    843463 8kd3:B (2.9) BS02 dna ? GO:0000086 ... P22579 37666978
    843464 8kd3:D (2.9) BS01 dna ? GO:0000122 ... Q12432 37666978
    843465 8kd3:F (2.9) BS01 dna ? GO:0000122 ... Q12432 37666978
    843466 8kd3:O (2.9) BS01 dna ? GO:0000786 ... A0A310TTQ1 37666978
    843467 8kd3:O (2.9) BS02 dna ? GO:0000786 ... A0A310TTQ1 37666978
    843468 8kd3:P (2.9) BS01 dna ? GO:0000786 ... P62799 37666978
    843469 8kd3:P (2.9) BS02 dna ? GO:0000786 ... P62799 37666978
    843470 8kd3:Q (2.9) BS01 dna ? GO:0000786 ... Q6AZJ8 37666978
    843471 8kd3:Q (2.9) BS02 dna ? GO:0000786 ... Q6AZJ8 37666978
    843472 8kd3:R (2.9) BS01 dna ? GO:0000786 ... P02281 37666978
    843473 8kd3:R (2.9) BS02 dna ? GO:0000786 ... P02281 37666978
    843474 8kd3:S (2.9) BS01 dna ? GO:0000786 ... A0A310TTQ1 37666978
    843475 8kd3:S (2.9) BS02 dna ? GO:0000786 ... A0A310TTQ1 37666978
    843476 8kd3:T (2.9) BS01 dna ? GO:0000786 ... P62799 37666978
    843477 8kd3:T (2.9) BS02 dna ? GO:0000786 ... P62799 37666978
    843478 8kd3:U (2.9) BS01 dna ? GO:0000786 ... Q6AZJ8 37666978
    843479 8kd3:U (2.9) BS02 dna ? GO:0000786 ... Q6AZJ8 37666978
    843480 8kd3:V (2.9) BS01 dna ? GO:0000786 ... P02281 37666978
    843481 8kd3:V (2.9) BS02 dna ? GO:0000786 ... P02281 37666978
    843482 8kd4:B (2.93) BS01 dna ? GO:0003714 ... P22579 37666978
    843483 8kd4:B (2.93) BS02 dna ? GO:0003714 ... P22579 37666978
    843484 8kd4:D (2.93) BS01 dna ? GO:0000122 ... Q12432 37666978
    843485 8kd4:E (2.93) BS01 dna ? GO:0000118 ... Q04779 37666978
    843486 8kd4:F (2.93) BS01 dna ? GO:0000122 ... Q12432 37666978
    843487 8kd4:O (2.93) BS01 dna ? GO:0000786 ... P84233 37666978
    843488 8kd4:O (2.93) BS02 dna ? GO:0000786 ... P84233 37666978
    843489 8kd4:P (2.93) BS01 dna ? GO:0000786 ... P62799 37666978
    843490 8kd4:P (2.93) BS02 dna ? GO:0000786 ... P62799 37666978
    843491 8kd4:Q (2.93) BS01 dna ? GO:0000786 ... P06897 37666978
    843492 8kd4:Q (2.93) BS02 dna ? GO:0000786 ... P06897 37666978
    843493 8kd4:R (2.93) BS01 dna ? GO:0000786 ... P02281 37666978
    843494 8kd4:R (2.93) BS02 dna ? GO:0000786 ... P02281 37666978
    843495 8kd4:S (2.93) BS01 dna ? GO:0000786 ... P84233 37666978
    843496 8kd4:S (2.93) BS02 dna ? GO:0000786 ... P84233 37666978
    843497 8kd4:T (2.93) BS01 dna ? GO:0000786 ... P62799 37666978
    843498 8kd4:T (2.93) BS02 dna ? GO:0000786 ... P62799 37666978
    843499 8kd4:U (2.93) BS01 dna ? GO:0000786 ... P06897 37666978
    843500 8kd4:U (2.93) BS02 dna ? GO:0000786 ... P06897 37666978
    843501 8kd4:V (2.93) BS01 dna ? GO:0000786 ... P02281 37666978
    843502 8kd4:V (2.93) BS02 dna ? GO:0000786 ... P02281 37666978
    843503 8kd5:B (2.9) BS01 dna ? GO:0000086 ... P22579 37666978
    843504 8kd5:D (2.9) BS01 dna ? GO:0000122 ... Q12432 37666978
    843505 8kd5:F (2.9) BS01 dna ? GO:0000122 ... Q12432 37666978
    843506 8kd5:O (2.9) BS01 dna ? GO:0000786 ... P84233 37666978
    843507 8kd5:O (2.9) BS02 dna ? GO:0000786 ... P84233 37666978
    843508 8kd5:P (2.9) BS01 dna ? GO:0000786 ... P62799 37666978
    843509 8kd5:P (2.9) BS02 dna ? GO:0000786 ... P62799 37666978
    843510 8kd5:Q (2.9) BS01 dna ? GO:0000786 ... P06897 37666978
    843511 8kd5:Q (2.9) BS02 dna ? GO:0000786 ... P06897 37666978
    843512 8kd5:R (2.9) BS01 dna ? GO:0000786 ... P02281 37666978
    843513 8kd5:R (2.9) BS02 dna ? GO:0000786 ... P02281 37666978
    843514 8kd5:S (2.9) BS01 dna ? GO:0000786 ... P84233 37666978
    843515 8kd5:S (2.9) BS02 dna ? GO:0000786 ... P84233 37666978
    843516 8kd5:T (2.9) BS01 dna ? GO:0000786 ... P62799 37666978
    843517 8kd5:T (2.9) BS02 dna ? GO:0000786 ... P62799 37666978
    843518 8kd5:U (2.9) BS01 dna ? GO:0000786 ... P06897 37666978
    843519 8kd5:U (2.9) BS02 dna ? GO:0000786 ... P06897 37666978
    843520 8kd5:V (2.9) BS01 dna ? GO:0000786 ... P02281 37666978
    843521 8kd5:V (2.9) BS02 dna ? GO:0000786 ... P02281 37666978
    843522 8kd6:B (3.07) BS01 dna ? GO:0003714 ... P22579 37666978
    843523 8kd6:D (3.07) BS01 dna ? GO:0000122 ... Q12432 37666978
    843524 8kd6:E (3.07) BS01 dna ? GO:0000118 ... Q04779 37666978
    843525 8kd6:E (3.07) BS02 dna ? GO:0000118 ... Q04779 37666978
    843526 8kd6:F (3.07) BS01 dna ? GO:0000122 ... Q12432 37666978
    843527 8kd6:O (3.07) BS01 dna ? GO:0000786 ... P84233 37666978
    843528 8kd6:O (3.07) BS02 dna ? GO:0000786 ... P84233 37666978
    843529 8kd6:P (3.07) BS01 dna ? GO:0000786 ... P62799 37666978
    843530 8kd6:P (3.07) BS02 dna ? GO:0000786 ... P62799 37666978
    843531 8kd6:Q (3.07) BS01 dna ? GO:0000786 ... P06897 37666978
    843532 8kd6:Q (3.07) BS02 dna ? GO:0000786 ... P06897 37666978
    843533 8kd6:R (3.07) BS01 dna ? GO:0000786 ... P02281 37666978
    843534 8kd6:R (3.07) BS02 dna ? GO:0000786 ... P02281 37666978
    843535 8kd6:S (3.07) BS01 dna ? GO:0000786 ... P84233 37666978
    843536 8kd6:S (3.07) BS02 dna ? GO:0000786 ... P84233 37666978
    843537 8kd6:T (3.07) BS01 dna ? GO:0000786 ... P62799 37666978
    843538 8kd6:T (3.07) BS02 dna ? GO:0000786 ... P62799 37666978
    843539 8kd6:U (3.07) BS01 dna ? GO:0000786 ... P06897 37666978
    843540 8kd6:U (3.07) BS02 dna ? GO:0000786 ... P06897 37666978
    843541 8kd6:V (3.07) BS01 dna ? GO:0000786 ... P02281 37666978
    843542 8kd6:V (3.07) BS02 dna ? GO:0000786 ... P02281 37666978
    843543 8kd7:D (3.09) BS01 dna ? GO:0000122 ... Q12432 37666978
    843544 8kd7:O (3.09) BS01 dna ? GO:0000786 ... P84233 37666978
    843545 8kd7:O (3.09) BS02 dna ? GO:0000786 ... P84233 37666978
    843546 8kd7:P (3.09) BS01 dna ? GO:0000786 ... P62799 37666978
    843547 8kd7:P (3.09) BS02 dna ? GO:0000786 ... P62799 37666978
    843548 8kd7:Q (3.09) BS01 dna ? GO:0000786 ... P06897 37666978
    843549 8kd7:Q (3.09) BS02 dna ? GO:0000786 ... P06897 37666978
    843550 8kd7:R (3.09) BS01 dna ? GO:0000786 ... P02281 37666978
    843551 8kd7:R (3.09) BS02 dna ? GO:0000786 ... P02281 37666978
    843552 8kd7:S (3.09) BS01 dna ? GO:0000786 ... P84233 37666978
    843553 8kd7:S (3.09) BS02 dna ? GO:0000786 ... P84233 37666978
    843554 8kd7:T (3.09) BS01 dna ? GO:0000786 ... P62799 37666978
    843555 8kd7:T (3.09) BS02 dna ? GO:0000786 ... P62799 37666978
    843556 8kd7:U (3.09) BS01 dna ? GO:0000786 ... P06897 37666978
    843557 8kd7:U (3.09) BS02 dna ? GO:0000786 ... P06897 37666978
    843558 8kd7:V (3.09) BS01 dna ? GO:0000786 ... P02281 37666978
    843559 8kd7:V (3.09) BS02 dna ? GO:0000786 ... P02281 37666978
    843560 8kd9:A (2.87) BS01 rna N/A GO:0001682 ... O67035 N/A
    843561 8kd9:C (2.87) BS01 rna N/A GO:0001682 ... O67035 N/A
    843562 8kd9:C (2.87) BS02 rna N/A GO:0001682 ... O67035 N/A
    843563 8kd9:D (2.87) BS01 rna N/A GO:0001682 ... O67035 N/A
    843564 8kd9:D (2.87) BS02 rna N/A GO:0001682 ... O67035 N/A
    843565 8kd9:E (2.87) BS01 rna N/A GO:0001682 ... O67035 N/A
    843566 8kd9:F (2.87) BS01 rna N/A GO:0001682 ... O67035 N/A
    843567 8kd9:G (2.87) BS01 rna N/A GO:0001682 ... O67035 N/A
    843568 8kd9:G (2.87) BS02 rna N/A GO:0001682 ... O67035 N/A
    843569 8kd9:H (2.87) BS01 rna N/A GO:0001682 ... O67035 N/A
    843570 8kd9:H (2.87) BS02 rna N/A GO:0001682 ... O67035 N/A
    843571 8kd9:I (2.87) BS01 rna N/A GO:0001682 ... O67035 N/A
    843572 8kd9:J (2.87) BS01 rna N/A GO:0001682 ... O67035 N/A
    843573 8kda:A (3.19) BS01 rna N/A GO:0001682 ... D3DIV8 N/A
    843574 8kda:C (3.19) BS01 rna N/A GO:0001682 ... D3DIV8 N/A
    843575 8kda:C (3.19) BS02 rna N/A GO:0001682 ... D3DIV8 N/A
    843576 8kda:D (3.19) BS01 rna N/A GO:0001682 ... D3DIV8 N/A
    843577 8kda:D (3.19) BS02 rna N/A GO:0001682 ... D3DIV8 N/A
    843578 8kda:E (3.19) BS01 rna N/A GO:0001682 ... D3DIV8 N/A
    843579 8kda:E (3.19) BS02 MG N/A GO:0001682 ... D3DIV8 N/A
    843580 8kda:F (3.19) BS01 rna N/A GO:0001682 ... D3DIV8 N/A
    843581 8kda:G (3.19) BS01 rna N/A GO:0001682 ... D3DIV8 N/A
    843582 8kda:H (3.19) BS01 rna N/A GO:0001682 ... D3DIV8 N/A
    843583 8kda:H (3.19) BS02 rna N/A GO:0001682 ... D3DIV8 N/A
    843584 8kda:I (3.19) BS01 rna N/A GO:0001682 ... D3DIV8 N/A
    843585 8kda:J (3.19) BS01 rna N/A GO:0001682 ... D3DIV8 N/A
    843586 8kda:K (3.19) BS01 rna N/A GO:0001682 ... D3DIV8 N/A
    843587 8kdb:A (2.7) BS01 MG 2.1.1.-
    2.1.1.375
    2.7.7.48
    2.7.7.88
    3.6.1.-
    GO:0001172 ... O89238 38605025
    843588 8kdb:A (2.7) BS02 ZN 2.1.1.-
    2.1.1.375
    2.7.7.48
    2.7.7.88
    3.6.1.-
    GO:0001172 ... O89238 38605025
    843589 8kdb:A (2.7) BS03 ZN 2.1.1.-
    2.1.1.375
    2.7.7.48
    2.7.7.88
    3.6.1.-
    GO:0001172 ... O89238 38605025
    843590 8kdc:A (3.3) BS01 ZN 2.1.1.-
    2.1.1.375
    2.7.7.48
    2.7.7.88
    3.6.1.-
    GO:0001172 ... O89238 38605025
    843591 8kdc:A (3.3) BS02 ZN 2.1.1.-
    2.1.1.375
    2.7.7.48
    2.7.7.88
    3.6.1.-
    GO:0001172 ... O89238 38605025
    843592 8kdd:B (3.83) BS01 VRW N/A N/A Q01650 N/A
    843593 8kde:A (2.6) BS01 CLA N/A GO:0005506 ... P07753 38890314
    843594 8kde:A (2.6) BS02 PHO N/A GO:0005506 ... P07753 38890314
    843595 8kde:A (2.6) BS03 PHO N/A GO:0005506 ... P07753 38890314
    843596 8kde:A (2.6) BS04 CLA N/A GO:0005506 ... P07753 38890314
    843597 8kde:A (2.6) BS05 BCT N/A GO:0005506 ... P07753 38890314
    843598 8kde:A (2.6) BS06 FE2 N/A GO:0005506 ... P07753 38890314
    843599 8kde:A (2.6) BS07 CLA N/A GO:0005506 ... P07753 38890314
    843600 8kde:A (2.6) BS08 CLA N/A GO:0005506 ... P07753 38890314

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).