SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    843601 8kde:A (2.6) BS09 CLA N/A GO:0005506 ... P07753 38890314
    843602 8kde:B (2.6) BS01 CLA N/A GO:0009507 ... P37255 38890314
    843603 8kde:B (2.6) BS02 CLA N/A GO:0009507 ... P37255 38890314
    843604 8kde:B (2.6) BS03 CLA N/A GO:0009507 ... P37255 38890314
    843605 8kde:B (2.6) BS04 CLA N/A GO:0009507 ... P37255 38890314
    843606 8kde:B (2.6) BS05 CLA N/A GO:0009507 ... P37255 38890314
    843607 8kde:B (2.6) BS06 CLA N/A GO:0009507 ... P37255 38890314
    843608 8kde:B (2.6) BS07 CLA N/A GO:0009507 ... P37255 38890314
    843609 8kde:B (2.6) BS08 CLA N/A GO:0009507 ... P37255 38890314
    843610 8kde:B (2.6) BS09 CLA N/A GO:0009507 ... P37255 38890314
    843611 8kde:B (2.6) BS10 CLA N/A GO:0009507 ... P37255 38890314
    843612 8kde:B (2.6) BS11 CLA N/A GO:0009507 ... P37255 38890314
    843613 8kde:B (2.6) BS12 CLA N/A GO:0009507 ... P37255 38890314
    843614 8kde:B (2.6) BS13 CLA N/A GO:0009507 ... P37255 38890314
    843615 8kde:B (2.6) BS14 CLA N/A GO:0009507 ... P37255 38890314
    843616 8kde:B (2.6) BS15 CLA N/A GO:0009507 ... P37255 38890314
    843617 8kde:C (2.6) BS01 CLA N/A GO:0005737 ... P10898 38890314
    843618 8kde:C (2.6) BS02 CLA N/A GO:0005737 ... P10898 38890314
    843619 8kde:C (2.6) BS03 CLA N/A GO:0005737 ... P10898 38890314
    843620 8kde:C (2.6) BS04 CLA N/A GO:0005737 ... P10898 38890314
    843621 8kde:C (2.6) BS05 CLA N/A GO:0005737 ... P10898 38890314
    843622 8kde:C (2.6) BS06 CLA N/A GO:0005737 ... P10898 38890314
    843623 8kde:C (2.6) BS07 CLA N/A GO:0005737 ... P10898 38890314
    843624 8kde:C (2.6) BS08 CLA N/A GO:0005737 ... P10898 38890314
    843625 8kde:C (2.6) BS09 CLA N/A GO:0005737 ... P10898 38890314
    843626 8kde:C (2.6) BS10 CLA N/A GO:0005737 ... P10898 38890314
    843627 8kde:C (2.6) BS11 CLA N/A GO:0005737 ... P10898 38890314
    843628 8kde:C (2.6) BS12 CLA N/A GO:0005737 ... P10898 38890314
    843629 8kde:C (2.6) BS13 CLA N/A GO:0005737 ... P10898 38890314
    843630 8kde:D (2.6) BS01 CLA N/A GO:0005506 ... P06007 38890314
    843631 8kde:D (2.6) BS02 CLA N/A GO:0005506 ... P06007 38890314
    843632 8kde:D (2.6) BS03 CLA N/A GO:0005506 ... P06007 38890314
    843633 8kde:D (2.6) BS04 CLA N/A GO:0005506 ... P06007 38890314
    843634 8kde:D (2.6) BS05 PHO N/A GO:0005506 ... P06007 38890314
    843635 8kde:D (2.6) BS06 PHO N/A GO:0005506 ... P06007 38890314
    843636 8kde:D (2.6) BS07 VTQ N/A GO:0005506 ... P06007 38890314
    843637 8kde:D (2.6) BS08 BCT N/A GO:0005506 ... P06007 38890314
    843638 8kde:D (2.6) BS09 FE2 N/A GO:0005506 ... P06007 38890314
    843639 8kde:D (2.6) BS10 CLA N/A GO:0005506 ... P06007 38890314
    843640 8kde:E (2.6) BS01 HEM N/A GO:0005506 ... P48268 38890314
    843641 8kde:F (2.6) BS01 HEM N/A GO:0005506 ... Q08363 38890314
    843642 8kde:F (2.6) BS02 VTQ N/A GO:0005506 ... Q08363 38890314
    843643 8kde:H (2.6) BS01 CLA N/A GO:0009507 ... P22666 38890314
    843644 8kde:H (2.6) BS02 CLA N/A GO:0009507 ... P22666 38890314
    843645 8kde:I (2.6) BS01 CLA N/A GO:0005737 ... P59763 38890314
    843646 8kde:K (2.6) BS01 CLA N/A GO:0005737 ... P18263 38890314
    843647 8kde:X (2.6) BS01 VTQ N/A GO:0009523 ... A8I846 38890314
    843648 8kdf:A (3.89) BS01 CLR N/A N/A P08195 N/A
    843649 8kdf:A (3.89) BS02 LBN N/A N/A P08195 N/A
    843650 8kdf:B (3.89) BS01 CLR N/A N/A Q01650 N/A
    843651 8kdf:B (3.89) BS02 LBN N/A N/A Q01650 N/A
    843652 8kdf:B (3.89) BS03 VRW N/A N/A Q01650 N/A
    843653 8kdg:B (3.68) BS01 VU0 N/A N/A Q01650 N/A
    843654 8kdh:A (3.78) BS01 LBN N/A N/A P08195 N/A
    843655 8kdh:B (3.78) BS01 CLR N/A N/A Q01650 N/A
    843656 8kdh:B (3.78) BS02 CLR N/A N/A Q01650 N/A
    843657 8kdh:B (3.78) BS03 LBN N/A N/A Q01650 N/A
    843658 8kdh:B (3.78) BS04 VU0 N/A N/A Q01650 N/A
    843659 8kdj:A (3.73) BS01 CLR N/A N/A P08195 N/A
    843660 8kdj:A (3.73) BS02 LBN N/A N/A P08195 N/A
    843661 8kdj:B (3.73) BS01 LBN N/A N/A Q01650 N/A
    843662 8kdj:B (3.73) BS02 CLR N/A N/A Q01650 N/A
    843663 8kdj:B (3.73) BS03 CLR N/A N/A Q01650 N/A
    843664 8kdj:B (3.73) BS04 LBN N/A N/A Q01650 N/A
    843665 8kdn:B (4.12) BS01 PHE N/A N/A Q01650 N/A
    843666 8kdo:B (4.12) BS01 VUC N/A N/A Q01650 N/A
    843667 8kdu:A (2.3) BS01 I4Q N/A GO:0004175 ... P00760 N/A
    843668 8kdu:A (2.3) BS02 JNR N/A GO:0004175 ... P00760 N/A
    843669 8kdu:A (2.3) BS03 CA N/A GO:0004175 ... P00760 N/A
    843670 8kdx:A (1.01) BS01 peptide 2.7.10.2 N/A P06241 38218365
    843671 8kdz:A (2.6) BS01 SAH N/A N/A C1KBQ3 N/A
    843672 8kdz:A (2.6) BS02 QAP N/A N/A C1KBQ3 N/A
    843673 8kdz:A (2.6) BS03 QAP N/A N/A C1KBQ3 N/A
    843674 8kdz:B (2.6) BS01 SAH N/A N/A C1KBQ3 N/A
    843675 8ke1:A (2.50082) BS01 ANP 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    843676 8ke1:A (2.50082) BS02 6CV 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    843677 8ke1:A (2.50082) BS03 MG 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    843678 8ke2:A (2.1964) BS01 MG 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    843679 8ke2:A (2.1964) BS02 ANP 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    843680 8ke2:A (2.1964) BS03 FX9 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    843681 8ke3:A (1.89981) BS01 ANP 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    843682 8ke3:A (1.89981) BS02 MG 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    843683 8ke3:A (1.89981) BS03 FXC 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    843684 8ke4:A (1.75051) BS01 ANP 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    843685 8ke4:A (1.75051) BS02 MG 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    843686 8ke4:A (1.75051) BS03 FXF 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    843687 8ke5:A (1.90007) BS01 MG 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    843688 8ke5:A (1.90007) BS02 ANP 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    843689 8ke5:A (1.90007) BS03 FXL 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    843690 8ke6:A (1.89571) BS01 ANP 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    843691 8ke6:A (1.89571) BS02 MG 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    843692 8ke6:A (1.89571) BS03 FCL 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    843693 8kea:A (3.44) BS01 peptide N/A GO:0003824 ... A0A191SAW2
    A0A191SAX3
    38531972
    843694 8kea:B (3.44) BS01 peptide N/A GO:0003824 ... A0A191SAW2
    A0A191SAX3
    38531972
    843695 8kea:C (3.44) BS01 peptide N/A GO:0003824 ... A0A191SAW2
    A0A191SAX3
    38531972
    843696 8kea:D (3.44) BS01 peptide N/A N/A A0A191SAW9 38531972
    843697 8kea:D (3.44) BS02 peptide N/A N/A A0A191SAW9 38531972
    843698 8kea:E (3.44) BS01 peptide N/A N/A A0A191SAW9 38531972
    843699 8kea:F (3.44) BS01 peptide N/A N/A A0A191SAW9 38531972
    843700 8kei:B (3.56) BS01 HEM 1.-.-.- GO:0005515 ... P04839 38805284
    843701 8kei:B (3.56) BS02 HEM 1.-.-.- GO:0005515 ... P04839 38805284
    843702 8kei:B (3.56) BS03 LBN 1.-.-.- GO:0005515 ... P04839 38805284
    843703 8kei:D (3.56) BS01 HEM ? N/A Q9BQA9 38805284
    843704 8kes:C (3.5) BS01 MAN N/A N/A Q9UBV2 N/A
    843705 8kes:D (3.5) BS01 MAN N/A N/A Q9UBV2 N/A
    843706 8kes:E (3.5) BS01 MAN N/A N/A Q96DZ1 N/A
    843707 8kes:F (3.5) BS01 MAN N/A N/A Q96DZ1 N/A
    843708 8ket:C (3.3) BS01 BMA N/A N/A Q9UBV2 N/A
    843709 8ket:F (3.3) BS01 MAN N/A N/A Q96DZ1 N/A
    843710 8kev:C (3.5) BS01 MAN N/A N/A Q9UBV2 N/A
    843711 8kev:E (3.5) BS01 MAN N/A N/A Q96DZ1 N/A
    843712 8kev:F (3.5) BS01 MAN N/A N/A Q96DZ1 N/A
    843713 8kex:E (3.2) BS01 JW0 N/A GO:0004930 ... P0ABE7
    P42212
    Q96LA9
    39476841
    843714 8kf1:B (3.3) BS01 VW6 N/A GO:0004867 ... P05067 N/A
    843715 8kf1:C (3.3) BS01 VW6 N/A GO:0004867 ... P05067 N/A
    843716 8kf1:F (3.3) BS01 VW6 N/A GO:0004867 ... P05067 N/A
    843717 8kf1:H (3.3) BS01 VW6 N/A GO:0004867 ... P05067 N/A
    843718 8kf1:J (3.3) BS01 VW6 N/A GO:0004867 ... P05067 N/A
    843719 8kf1:J (3.3) BS02 VW6 N/A GO:0004867 ... P05067 N/A
    843720 8kfd:A (1.8) BS01 MG 1.16.3.1 GO:0004322 ... P02794 38627234
    843721 8kfd:A (1.8) BS02 MG 1.16.3.1 GO:0004322 ... P02794 38627234
    843722 8kfh:A (2.27) BS01 HNN N/A GO:0004601 ... P02185 N/A
    843723 8kfh:B (2.27) BS01 HNN N/A GO:0004601 ... P02185 N/A
    843724 8kfi:A (2.37) BS01 HNN N/A GO:0004601 ... P02185 N/A
    843725 8kfi:B (2.37) BS01 HNN N/A GO:0004601 ... P02185 N/A
    843726 8kfj:A (1.9) BS01 HNN N/A GO:0004601 ... P02185 N/A
    843727 8kfj:B (1.9) BS01 HNN N/A GO:0004601 ... P02185 N/A
    843728 8kfo:B (3.6) BS01 OP6 N/A GO:0005615 ... P02769 N/A
    843729 8kfq:A (3.22) BS01 VUZ N/A GO:0004672 ... P00533 N/A
    843730 8kfr:A (2.1) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    843731 8kfr:A (2.1) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    843732 8kfr:A (2.1) BS03 dna N/A GO:0008821 ... B4FCI7 38886375
    843733 8kfr:A (2.1) BS04 CA N/A GO:0008821 ... B4FCI7 38886375
    843734 8kfr:B (2.1) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    843735 8kfr:B (2.1) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    843736 8kfr:B (2.1) BS03 CA N/A GO:0008821 ... B4FCI7 38886375
    843737 8kfs:A (2.15) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    843738 8kfs:A (2.15) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    843739 8kfs:A (2.15) BS03 dna N/A GO:0008821 ... B4FCI7 38886375
    843740 8kfs:B (2.15) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    843741 8kfs:B (2.15) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    843742 8kft:A (2.43) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    843743 8kft:A (2.43) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    843744 8kft:A (2.43) BS03 dna N/A GO:0008821 ... B4FCI7 38886375
    843745 8kft:A (2.43) BS04 MN N/A GO:0008821 ... B4FCI7 38886375
    843746 8kft:B (2.43) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    843747 8kft:B (2.43) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    843748 8kft:B (2.43) BS03 MN N/A GO:0008821 ... B4FCI7 38886375
    843749 8kfu:A (2.3) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    843750 8kfu:A (2.3) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    843751 8kfu:A (2.3) BS03 dna N/A GO:0008821 ... B4FCI7 38886375
    843752 8kfu:A (2.3) BS04 MN N/A GO:0008821 ... B4FCI7 38886375
    843753 8kfu:A (2.3) BS05 MN N/A GO:0008821 ... B4FCI7 38886375
    843754 8kfu:B (2.3) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    843755 8kfu:B (2.3) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    843756 8kfu:B (2.3) BS03 MN N/A GO:0008821 ... B4FCI7 38886375
    843757 8kfu:B (2.3) BS04 MN N/A GO:0008821 ... B4FCI7 38886375
    843758 8kfv:A (2.19) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    843759 8kfv:A (2.19) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    843760 8kfv:A (2.19) BS03 dna N/A GO:0008821 ... B4FCI7 38886375
    843761 8kfv:A (2.19) BS04 MN N/A GO:0008821 ... B4FCI7 38886375
    843762 8kfv:A (2.19) BS05 MN N/A GO:0008821 ... B4FCI7 38886375
    843763 8kfv:B (2.19) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    843764 8kfv:B (2.19) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    843765 8kfv:B (2.19) BS03 MN N/A GO:0008821 ... B4FCI7 38886375
    843766 8kfv:B (2.19) BS04 MN N/A GO:0008821 ... B4FCI7 38886375
    843767 8kfw:A (2.3) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    843768 8kfw:A (2.3) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    843769 8kfw:A (2.3) BS03 dna N/A GO:0008821 ... B4FCI7 38886375
    843770 8kfw:A (2.3) BS04 MN N/A GO:0008821 ... B4FCI7 38886375
    843771 8kfw:A (2.3) BS05 MN N/A GO:0008821 ... B4FCI7 38886375
    843772 8kfw:B (2.3) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    843773 8kfw:B (2.3) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    843774 8kfw:B (2.3) BS03 MN N/A GO:0008821 ... B4FCI7 38886375
    843775 8kfw:B (2.3) BS04 MN N/A GO:0008821 ... B4FCI7 38886375
    843776 8kfx:R (2.96) BS01 OS9 ? GO:0004930 ... P51685 38306437
    843777 8kfy:R (3.06) BS01 OXF ? GO:0004930 ... P51685 38306437
    843778 8kg2:A (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    843779 8kg2:B (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    843780 8kg2:C (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    843781 8kg2:D (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    843782 8kg2:E (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    843783 8kg2:F (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    843784 8kg2:G (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    843785 8kg2:H (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    843786 8kg2:I (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    843787 8kg2:J (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    843788 8kg2:K (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    843789 8kg2:L (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    843790 8kg5:A (3.17) BS01 336 N/A GO:0019064 ... P03420
    P10104
    38853183
    843791 8kg5:A (3.17) BS02 336 N/A GO:0019064 ... P03420
    P10104
    38853183
    843792 8kg5:B (3.17) BS01 336 N/A GO:0019064 ... P03420
    P10104
    38853183
    843793 8kg5:B (3.17) BS02 336 N/A GO:0019064 ... P03420
    P10104
    38853183
    843794 8kg5:C (3.17) BS01 336 N/A GO:0019064 ... P03420
    P10104
    38853183
    843795 8kg5:C (3.17) BS02 336 N/A GO:0019064 ... P03420
    P10104
    38853183
    843796 8kg6:2 (3.07) BS01 dna 3.6.4.12 GO:0000727 ... P29469 37730685
    843797 8kg6:2 (3.07) BS02 ZN 3.6.4.12 GO:0000727 ... P29469 37730685
    843798 8kg6:2 (3.07) BS03 ADP 3.6.4.12 GO:0000727 ... P29469 37730685
    843799 8kg6:2 (3.07) BS04 AGS 3.6.4.12 GO:0000727 ... P29469 37730685
    843800 8kg6:3 (3.07) BS01 dna 3.6.4.12 GO:0000727 ... P24279 37730685

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).