SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    845001 8oh6:o (3.35) BS02 rna N/A GO:0000463 ... A0A1D8PDL6 N/A
    845002 8oh6:p (3.35) BS01 rna N/A GO:0000470 ... Q5ANA1 N/A
    845003 8oh6:p (3.35) BS02 rna N/A GO:0000470 ... Q5ANA1 N/A
    845004 8oh6:q (3.35) BS01 rna N/A GO:0002181 ... Q5AEN2 N/A
    845005 8oh6:r (3.35) BS01 rna N/A GO:0003735 ... Q5AIB8 N/A
    845006 8oh6:r (3.35) BS02 rna N/A GO:0003735 ... Q5AIB8 N/A
    845007 8oh6:s (3.35) BS01 rna N/A GO:0003723 ... A0A1D8PHW1 N/A
    845008 8oh6:s (3.35) BS02 rna N/A GO:0003723 ... A0A1D8PHW1 N/A
    845009 8oh6:t (3.35) BS01 rna N/A GO:0003723 ... O59931 N/A
    845010 8oh6:t (3.35) BS02 rna N/A GO:0003723 ... O59931 N/A
    845011 8oh6:u (3.35) BS01 rna N/A GO:0003723 ... A0A1D8PFL9 N/A
    845012 8oh6:v (3.35) BS01 rna N/A GO:0002181 ... Q5A6R1 N/A
    845013 8oh6:v (3.35) BS02 rna N/A GO:0002181 ... Q5A6R1 N/A
    845014 8oh6:w (3.35) BS01 rna N/A GO:0003729 ... Q5AB87 N/A
    845015 8oh6:x (3.35) BS01 rna N/A GO:0002181 ... Q59TE0 N/A
    845016 8oh6:x (3.35) BS02 rna N/A GO:0002181 ... Q59TE0 N/A
    845017 8oh6:y (3.35) BS01 rna N/A GO:0003723 ... A0A1D8PK43 N/A
    845018 8oh6:z (3.35) BS01 rna N/A GO:0003723 ... A0A1D8PK40 N/A
    845019 8oh6:z (3.35) BS02 rna N/A GO:0003723 ... A0A1D8PK40 N/A
    845020 8oh8:AAA (2.12) BS01 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845021 8oh8:AAA (2.12) BS02 OXY 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845022 8oh8:AAA (2.12) BS03 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845023 8oh8:BBB (2.12) BS01 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845024 8oh8:BBB (2.12) BS02 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845025 8oh8:CCC (2.12) BS01 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845026 8oh8:CCC (2.12) BS02 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845027 8oh8:DDD (2.12) BS01 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845028 8oh8:DDD (2.12) BS02 OXY 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845029 8oh8:DDD (2.12) BS03 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845030 8oh9:A (3.2) BS01 FES ? GO:0016491 ... A0A0U1KYW8 37673911
    845031 8oh9:B (3.2) BS01 ZN 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    845032 8oh9:B (3.2) BS02 FES 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    845033 8oh9:B (3.2) BS03 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    845034 8oh9:B (3.2) BS04 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    845035 8oh9:B (3.2) BS05 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    845036 8oh9:C (3.2) BS01 FAD 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845037 8oh9:C (3.2) BS02 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845038 8oh9:C (3.2) BS03 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845039 8oh9:C (3.2) BS04 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845040 8oh9:C (3.2) BS05 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845041 8oh9:C (3.2) BS06 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845042 8oh9:C (3.2) BS07 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845043 8oh9:C (3.2) BS08 FES 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845044 8oh9:D (3.2) BS01 FES ? GO:0016491 ... A0A0U1KYW8 37673911
    845045 8oh9:E (3.2) BS01 ZN 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    845046 8oh9:E (3.2) BS02 FES 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    845047 8oh9:E (3.2) BS03 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    845048 8oh9:E (3.2) BS04 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    845049 8oh9:E (3.2) BS05 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    845050 8oh9:F (3.2) BS01 FAD 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845051 8oh9:F (3.2) BS02 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845052 8oh9:F (3.2) BS03 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845053 8oh9:F (3.2) BS04 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845054 8oh9:F (3.2) BS05 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845055 8oh9:F (3.2) BS06 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845056 8oh9:F (3.2) BS07 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845057 8oh9:F (3.2) BS08 FES 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845058 8oh9:G (3.2) BS01 FES ? GO:0016491 ... A0A0U1KYW8 37673911
    845059 8oh9:H (3.2) BS01 ZN 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    845060 8oh9:H (3.2) BS02 FES 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    845061 8oh9:H (3.2) BS03 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    845062 8oh9:H (3.2) BS04 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    845063 8oh9:H (3.2) BS05 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    845064 8oh9:I (3.2) BS01 FAD 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845065 8oh9:I (3.2) BS02 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845066 8oh9:I (3.2) BS03 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845067 8oh9:I (3.2) BS04 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845068 8oh9:I (3.2) BS05 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845069 8oh9:I (3.2) BS06 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845070 8oh9:I (3.2) BS07 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845071 8oh9:I (3.2) BS08 FES 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845072 8oh9:J (3.2) BS01 FES ? GO:0016491 ... A0A0U1KYW8 37673911
    845073 8oh9:K (3.2) BS01 ZN 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    845074 8oh9:K (3.2) BS02 FES 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    845075 8oh9:K (3.2) BS03 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    845076 8oh9:K (3.2) BS04 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    845077 8oh9:K (3.2) BS05 SF4 1.12.1.2 GO:0003677 ... A0A0U1KYM9 37673911
    845078 8oh9:L (3.2) BS01 FAD 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845079 8oh9:L (3.2) BS02 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845080 8oh9:L (3.2) BS03 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845081 8oh9:L (3.2) BS04 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845082 8oh9:L (3.2) BS05 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845083 8oh9:L (3.2) BS06 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845084 8oh9:L (3.2) BS07 SF4 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845085 8oh9:L (3.2) BS08 FES 1.2.1.2 GO:0016491 ... A0A0U1KYI6 37673911
    845086 8oha:A (2.37) BS01 PO4 1.2.1.-
    1.2.1.12    		 GO:0000166 ... Q72QM3 37409124
    845087 8oha:A (2.37) BS02 NAD 1.2.1.-
    1.2.1.12    		 GO:0000166 ... Q72QM3 37409124
    845088 8oha:B (2.37) BS01 PO4 1.2.1.-
    1.2.1.12    		 GO:0000166 ... Q72QM3 37409124
    845089 8oha:B (2.37) BS02 NAD 1.2.1.-
    1.2.1.12    		 GO:0000166 ... Q72QM3 37409124
    845090 8oha:C (2.37) BS01 NAD 1.2.1.-
    1.2.1.12    		 GO:0000166 ... Q72QM3 37409124
    845091 8oha:D (2.37) BS01 NAD 1.2.1.-
    1.2.1.12    		 GO:0000166 ... Q72QM3 37409124
    845092 8oha:E (2.37) BS01 NAD 1.2.1.-
    1.2.1.12    		 GO:0000166 ... Q72QM3 37409124
    845093 8oha:F (2.37) BS01 NAD 1.2.1.-
    1.2.1.12    		 GO:0000166 ... Q72QM3 37409124
    845094 8oha:G (2.37) BS01 NAD 1.2.1.-
    1.2.1.12    		 GO:0000166 ... Q72QM3 37409124
    845095 8oha:H (2.37) BS01 NAD 1.2.1.-
    1.2.1.12    		 GO:0000166 ... Q72QM3 37409124
    845096 8ohb:A (1.11) BS01 UHL 2.7.7.85 GO:0004016 ... Q45589 N/A
    845097 8ohb:B (1.11) BS01 UHL 2.7.7.85 GO:0004016 ... Q45589 N/A
    845098 8ohc:B (1.17) BS01 SYV 2.7.7.85 GO:0004016 ... Q45589 N/A
    845099 8ohd:A (3.1) BS01 rna 2.3.2.- GO:0000077 ... O94874 38383785
    845100 8ohd:B (3.1) BS01 rna ? GO:0000079 ... Q96JB5 38383785
    845101 8ohd:C (3.1) BS01 rna ? GO:0005515 ... Q96HY6 38383785
    845102 8ohd:K (3.1) BS01 rna ? GO:0000054 ... P56537 38383785
    845103 8ohd:LA (3.1) BS01 rna ? GO:0002181 ... P62917 38383785
    845104 8ohd:LB (3.1) BS01 rna ? GO:0002181 ... P39023 38383785
    845105 8ohd:LC (3.1) BS01 rna ? GO:0002181 ... P36578 38383785
    845106 8ohd:LC (3.1) BS02 rna ? GO:0002181 ... P36578 38383785
    845107 8ohd:LD (3.1) BS01 rna ? GO:0000027 ... P46777 38383785
    845108 8ohd:LD (3.1) BS02 rna ? GO:0000027 ... P46777 38383785
    845109 8ohd:LE (3.1) BS01 rna ? GO:0002181 ... Q02878 38383785
    845110 8ohd:LF (3.1) BS01 rna ? GO:0000463 ... P18124 38383785
    845111 8ohd:LF (3.1) BS02 rna ? GO:0000463 ... P18124 38383785
    845112 8ohd:LG (3.1) BS01 rna ? GO:0000470 ... P62424 38383785
    845113 8ohd:LG (3.1) BS02 rna ? GO:0000470 ... P62424 38383785
    845114 8ohd:LH (3.1) BS01 rna ? GO:0002181 ... P32969 38383785
    845115 8ohd:LI (3.1) BS01 rna ? GO:0000027 ... Q96L21 38383785
    845116 8ohd:LI (3.1) BS02 rna ? GO:0000027 ... Q96L21 38383785
    845117 8ohd:LJ (3.1) BS01 rna ? GO:0000027 ... P62913 38383785
    845118 8ohd:LJ (3.1) BS02 rna ? GO:0000027 ... P62913 38383785
    845119 8ohd:LL (3.1) BS01 rna ? GO:0001824 ... P26373 38383785
    845120 8ohd:LL (3.1) BS02 rna ? GO:0001824 ... P26373 38383785
    845121 8ohd:LM (3.1) BS01 rna ? GO:0002181 ... P50914 38383785
    845122 8ohd:LN (3.1) BS01 rna ? GO:0002181 ... P61313 38383785
    845123 8ohd:LN (3.1) BS02 rna ? GO:0002181 ... P61313 38383785
    845124 8ohd:LO (3.1) BS01 rna ? GO:0002181 ... P40429 38383785
    845125 8ohd:LP (3.1) BS01 rna ? GO:0002181 ... P18621 38383785
    845126 8ohd:LP (3.1) BS02 rna ? GO:0002181 ... P18621 38383785
    845127 8ohd:LQ (3.1) BS01 rna ? GO:0002181 ... Q07020 38383785
    845128 8ohd:LR (3.1) BS01 rna ? GO:0002181 ... P84098 38383785
    845129 8ohd:LS (3.1) BS01 rna ? GO:0002181 ... Q02543 38383785
    845130 8ohd:LS (3.1) BS02 rna ? GO:0002181 ... Q02543 38383785
    845131 8ohd:LT (3.1) BS01 rna ? GO:0002181 ... P46778 38383785
    845132 8ohd:LT (3.1) BS02 rna ? GO:0002181 ... P46778 38383785
    845133 8ohd:LU (3.1) BS01 rna ? GO:0002181 ... P35268 38383785
    845134 8ohd:LV (3.1) BS01 rna ? GO:0000122 ... P62829 38383785
    845135 8ohd:LW (3.1) BS01 rna ? GO:0000027 ... P83731 38383785
    845136 8ohd:LX (3.1) BS01 rna ? GO:0002181 ... P62750 38383785
    845137 8ohd:LX (3.1) BS02 rna ? GO:0002181 ... P62750 38383785
    845138 8ohd:LY (3.1) BS01 rna ? GO:0002181 ... P61254 38383785
    845139 8ohd:LY (3.1) BS02 rna ? GO:0002181 ... P61254 38383785
    845140 8ohd:LZ (3.1) BS01 rna ? GO:0002181 ... P61353 38383785
    845141 8ohd:La (3.1) BS01 rna ? GO:0002181 ... P46776 38383785
    845142 8ohd:Lb (3.1) BS01 rna ? GO:0002181 ... P47914 38383785
    845143 8ohd:Lc (3.1) BS01 rna ? GO:0002181 ... P62888 38383785
    845144 8ohd:Ld (3.1) BS01 rna ? GO:0002181 ... P62899 38383785
    845145 8ohd:Le (3.1) BS01 rna ? GO:0002181 ... P62910 38383785
    845146 8ohd:Lf (3.1) BS01 rna ? GO:0000049 ... P18077 38383785
    845147 8ohd:Lg (3.1) BS01 rna ? GO:0002181 ... P49207 38383785
    845148 8ohd:Lg (3.1) BS02 ZN ? GO:0002181 ... P49207 38383785
    845149 8ohd:Lh (3.1) BS01 rna ? GO:0000463 ... P42766 38383785
    845150 8ohd:Lh (3.1) BS02 rna ? GO:0000463 ... P42766 38383785
    845151 8ohd:Li (3.1) BS01 rna ? GO:0002181 ... Q9Y3U8 38383785
    845152 8ohd:Lj (3.1) BS01 rna ? GO:0002181 ... P61927 38383785
    845153 8ohd:Lj (3.1) BS02 rna ? GO:0002181 ... P61927 38383785
    845154 8ohd:Lj (3.1) BS03 ZN ? GO:0002181 ... P61927 38383785
    845155 8ohd:Lk (3.1) BS01 rna ? GO:0001501 ... P63173 38383785
    845156 8ohd:Ll (3.1) BS01 rna ? GO:0002181 ... P62891 38383785
    845157 8ohd:Ll (3.1) BS02 rna ? GO:0002181 ... P62891 38383785
    845158 8ohd:Lm (3.1) BS01 rna ? GO:0002181 ... P62987 38383785
    845159 8ohd:Lm (3.1) BS02 ZN ? GO:0002181 ... P62987 38383785
    845160 8ohd:Lo (3.1) BS01 rna ? GO:0002181 ... P83881 38383785
    845161 8ohd:Lo (3.1) BS02 ZN ? GO:0002181 ... P83881 38383785
    845162 8ohd:Lp (3.1) BS01 rna ? GO:0002181 ... P61513 38383785
    845163 8ohd:Lp (3.1) BS02 ZN ? GO:0002181 ... P61513 38383785
    845164 8ohd:Lr (3.1) BS01 rna ? GO:0002181 ... P46779 38383785
    845165 8ohd:Lz (3.1) BS01 rna ? GO:0002181 ... P62906 38383785
    845166 8ohe:A (1.15) BS01 RAY 2.7.7.85 GO:0004016 ... Q45589 N/A
    845167 8ohf:A (1.22) BS01 RB7 2.7.7.85 GO:0004016 ... Q45589 N/A
    845168 8ohf:B (1.22) BS01 RB7 2.7.7.85 GO:0004016 ... Q45589 N/A
    845169 8ohg:A (1.25) BS01 UI4 2.7.7.85 GO:0004016 ... Q45589 N/A
    845170 8ohh:A (1.3) BS01 XY4 2.7.7.85 GO:0004016 ... Q45589 N/A
    845171 8ohj:B (1.22) BS01 RDJ 2.7.7.85 GO:0004016 ... Q45589 N/A
    845172 8ohk:A (1.26) BS01 VOB 2.7.7.85 GO:0004016 ... Q45589 N/A
    845173 8ohl:A (1.29) BS01 VOF 2.7.7.85 GO:0004016 ... Q45589 N/A
    845174 8oho:A (1.32) BS01 TBJ 2.7.7.85 GO:0004016 ... Q45589 N/A
    845175 8oho:B (1.32) BS01 REG 2.7.7.85 GO:0004016 ... Q45589 N/A
    845176 8ohq:AAA (1.7) BS01 FUC 3.2.1.166 GO:0016020 ... Q9Y251 38118176
    845177 8ohq:AAA (1.7) BS02 VGO 3.2.1.166 GO:0016020 ... Q9Y251 38118176
    845178 8ohq:BBB (1.7) BS01 VGO 3.2.1.166 N/A Q9Y251 38118176
    845179 8ohr:AAA (1.8) BS01 VP5 3.2.1.166 GO:0016020 ... Q9Y251 38118176
    845180 8ohr:BBB (1.8) BS01 VP5 3.2.1.166 N/A Q9Y251 38118176
    845181 8oht:AAA (1.05) BS01 VON ? GO:0016020 ... C1F2K5 38118176
    845182 8ohu:AAA (1.25) BS01 SJ5 ? GO:0016020 ... C1F2K5 38118176
    845183 8ohv:AAA (1.5) BS01 VP5 ? GO:0016020 ... C1F2K5 38118176
    845184 8ohw:AAA (1.27) BS01 VON ? N/A Q63T97 38118176
    845185 8ohw:BBB (1.27) BS01 VON ? N/A Q63T97 38118176
    845186 8ohx:AAA (1.95) BS01 VON 3.2.1.31 GO:0004553 ... P05804 38118176
    845187 8ohx:BBB (1.95) BS01 VON 3.2.1.31 GO:0004553 ... P05804 38118176
    845188 8ohy:A (1.95) BS01 ZN ? GO:0004601 ... Q556V8 37593106
    845189 8ohy:A (1.95) BS02 HEM ? GO:0004601 ... Q556V8 37593106
    845190 8ohz:G (2.65) BS01 MG ? GO:0000502 ... P21243 38109686
    845191 8ohz:H (2.65) BS01 VOT 3.4.25.1 GO:0004298 ... P25043 38109686
    845192 8ohz:I (2.65) BS01 VOT ? GO:0000502 ... P25451 38109686
    845193 8ohz:K (2.65) BS01 VOT 3.4.25.1 GO:0004298 ... P30656 38109686
    845194 8ohz:K (2.65) BS02 MG 3.4.25.1 GO:0004298 ... P30656 38109686
    845195 8ohz:L (2.65) BS01 VOT ? GO:0000502 ... P23724 38109686
    845196 8ohz:V (2.65) BS01 VOT 3.4.25.1 GO:0004298 ... P25043 38109686
    845197 8ohz:V (2.65) BS02 MG 3.4.25.1 GO:0004298 ... P25043 38109686
    845198 8ohz:W (2.65) BS01 VOT ? GO:0000502 ... P25451 38109686
    845199 8ohz:Y (2.65) BS01 VOT 3.4.25.1 GO:0004298 ... P30656 38109686
    845200 8ohz:Y (2.65) BS02 MG 3.4.25.1 GO:0004298 ... P30656 38109686
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
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