SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    845201 8ohz:Z (2.65) BS01 VOT ? GO:0000502 ... P23724 38109686
    845202 8ohz:Z (2.65) BS02 MG ? GO:0000502 ... P23724 38109686
    845203 8oi1:G (2.95) BS01 MG ? GO:0000502 ... P21243 38109686
    845204 8oi1:H (2.95) BS01 VOX 3.4.25.1 GO:0004298 ... P25043 38109686
    845205 8oi1:K (2.95) BS01 VOX 3.4.25.1 GO:0004298 ... P30656 38109686
    845206 8oi1:K (2.95) BS02 MG 3.4.25.1 GO:0004298 ... P30656 38109686
    845207 8oi1:L (2.95) BS01 VOX ? GO:0000502 ... P23724 38109686
    845208 8oi1:N (2.95) BS01 MG 3.4.25.1 GO:0000502 ... P38624 38109686
    845209 8oi1:V (2.95) BS01 VOX 3.4.25.1 GO:0004298 ... P25043 38109686
    845210 8oi1:V (2.95) BS02 MG 3.4.25.1 GO:0004298 ... P25043 38109686
    845211 8oi1:W (2.95) BS01 VOX ? GO:0000502 ... P25451 38109686
    845212 8oi1:Y (2.95) BS01 VOX 3.4.25.1 GO:0004298 ... P30656 38109686
    845213 8oi1:Y (2.95) BS02 MG 3.4.25.1 GO:0004298 ... P30656 38109686
    845214 8oi1:Z (2.95) BS01 VOX ? GO:0000502 ... P23724 38109686
    845215 8oi1:Z (2.95) BS02 MG ? GO:0000502 ... P23724 38109686
    845216 8oi3:A (1.5) BS01 AYE ? GO:0006508 ... A0A2U9K2V6 38802699
    845217 8oi3:B (1.5) BS01 AYE ? GO:0006508 ... A0A2U9K2V6 38802699
    845218 8oi5:0 (2.9) BS01 rna N/A GO:0002181 ... A0A1D8PLC9 N/A
    845219 8oi5:0 (2.9) BS02 rna N/A GO:0002181 ... A0A1D8PLC9 N/A
    845220 8oi5:2 (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PGY0 N/A
    845221 8oi5:2 (2.9) BS02 rna N/A GO:0003735 ... A0A1D8PGY0 N/A
    845222 8oi5:5 (2.9) BS01 rna N/A GO:0002181 ... A0A1D8PM41 N/A
    845223 8oi5:6 (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PPT5 N/A
    845224 8oi5:7 (2.9) BS01 rna N/A GO:0002181 ... Q5A6A1 N/A
    845225 8oi5:8 (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PPS1 N/A
    845226 8oi5:8 (2.9) BS02 rna N/A GO:0003735 ... A0A1D8PPS1 N/A
    845227 8oi5:9 (2.9) BS01 rna N/A GO:0002181 ... A0A1D8PCQ5 N/A
    845228 8oi5:9 (2.9) BS02 rna N/A GO:0002181 ... A0A1D8PCQ5 N/A
    845229 8oi5:AA (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PFG4 N/A
    845230 8oi5:AB (2.9) BS01 rna N/A GO:0003723 ... A0A1D8PSC5 N/A
    845231 8oi5:AC (2.9) BS01 rna N/A GO:0002181 ... A0A1D8PF57 N/A
    845232 8oi5:AD (2.9) BS01 rna N/A GO:0003723 ... A0A1D8PM75 N/A
    845233 8oi5:AE (2.9) BS01 rna N/A GO:0002181 ... A0A1D8PHF5 N/A
    845234 8oi5:AF (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PPN6 N/A
    845235 8oi5:AG (2.9) BS01 rna N/A GO:0002181 ... A0A1D8PHH4 N/A
    845236 8oi5:AH (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PDZ1 N/A
    845237 8oi5:AH (2.9) BS02 ZN N/A GO:0003735 ... A0A1D8PDZ1 N/A
    845238 8oi5:AI (2.9) BS01 rna N/A GO:0000463 ... A0A1D8PK30 N/A
    845239 8oi5:AI (2.9) BS02 rna N/A GO:0000463 ... A0A1D8PK30 N/A
    845240 8oi5:AJ (2.9) BS01 rna N/A GO:0002181 ... A0A1D8PH21 N/A
    845241 8oi5:AK (2.9) BS01 rna N/A GO:0003723 ... A0A1D8PF45 N/A
    845242 8oi5:AK (2.9) BS02 rna N/A GO:0003723 ... A0A1D8PF45 N/A
    845243 8oi5:AK (2.9) BS03 ZN N/A GO:0003723 ... A0A1D8PF45 N/A
    845244 8oi5:AL (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PG16 N/A
    845245 8oi5:AL (2.9) BS02 MG N/A GO:0003735 ... A0A1D8PG16 N/A
    845246 8oi5:AM (2.9) BS01 rna N/A GO:0005737 ... A0A1D8PDT4 N/A
    845247 8oi5:AM (2.9) BS02 rna N/A GO:0005737 ... A0A1D8PDT4 N/A
    845248 8oi5:AN (2.9) BS01 rna N/A GO:0005737 ... A0A1D8PL68 N/A
    845249 8oi5:AN (2.9) BS02 ZN N/A GO:0005737 ... A0A1D8PL68 N/A
    845250 8oi5:AP (2.9) BS01 rna N/A GO:0005737 ... A0A1D8PEV4 N/A
    845251 8oi5:AP (2.9) BS02 3K5 N/A GO:0005737 ... A0A1D8PEV4 N/A
    845252 8oi5:AP (2.9) BS03 ZN N/A GO:0005737 ... A0A1D8PEV4 N/A
    845253 8oi5:AQ (2.9) BS01 rna N/A GO:0005737 ... A0A1D8PP14 N/A
    845254 8oi5:AQ (2.9) BS02 ZN N/A GO:0005737 ... A0A1D8PP14 N/A
    845255 8oi5:AR (2.9) BS01 rna N/A GO:0001403 ... P83774 N/A
    845256 8oi5:AW (2.9) BS01 rna N/A GO:0002181 ... A0A1D8PF08 N/A
    845257 8oi5:AW (2.9) BS02 rna N/A GO:0002181 ... A0A1D8PF08 N/A
    845258 8oi5:AW (2.9) BS03 MG N/A GO:0002181 ... A0A1D8PF08 N/A
    845259 8oi5:AX (2.9) BS01 rna N/A GO:0000027 ... Q59LS1 N/A
    845260 8oi5:AY (2.9) BS01 rna N/A GO:0003723 ... A0A1D8PFV1 N/A
    845261 8oi5:AY (2.9) BS02 rna N/A GO:0003723 ... A0A1D8PFV1 N/A
    845262 8oi5:AZ (2.9) BS01 rna N/A GO:0000027 ... Q5AGZ7 N/A
    845263 8oi5:AZ (2.9) BS02 rna N/A GO:0000027 ... Q5AGZ7 N/A
    845264 8oi5:BA (2.9) BS01 rna N/A GO:0002181 ... A0A1D8PCX8 N/A
    845265 8oi5:BB (2.9) BS01 rna N/A GO:0000463 ... A0A1D8PDL6 N/A
    845266 8oi5:BB (2.9) BS02 rna N/A GO:0000463 ... A0A1D8PDL6 N/A
    845267 8oi5:BC (2.9) BS01 rna N/A GO:0000470 ... Q5ANA1 N/A
    845268 8oi5:BC (2.9) BS02 rna N/A GO:0000470 ... Q5ANA1 N/A
    845269 8oi5:BD (2.9) BS01 rna N/A GO:0002181 ... Q5AEN2 N/A
    845270 8oi5:BE (2.9) BS01 rna N/A GO:0003735 ... Q5AIB8 N/A
    845271 8oi5:BE (2.9) BS02 rna N/A GO:0003735 ... Q5AIB8 N/A
    845272 8oi5:BF (2.9) BS01 rna N/A GO:0003723 ... A0A1D8PHW1 N/A
    845273 8oi5:BF (2.9) BS02 rna N/A GO:0003723 ... A0A1D8PHW1 N/A
    845274 8oi5:BG (2.9) BS01 rna N/A GO:0003723 ... O59931 N/A
    845275 8oi5:BG (2.9) BS02 rna N/A GO:0003723 ... O59931 N/A
    845276 8oi5:BG (2.9) BS03 rna N/A GO:0003723 ... O59931 N/A
    845277 8oi5:BH (2.9) BS01 rna N/A GO:0003723 ... A0A1D8PFL9 N/A
    845278 8oi5:BI (2.9) BS01 rna N/A GO:0002181 ... Q5A6R1 N/A
    845279 8oi5:BI (2.9) BS02 rna N/A GO:0002181 ... Q5A6R1 N/A
    845280 8oi5:BJ (2.9) BS01 rna N/A GO:0003729 ... Q5AB87 N/A
    845281 8oi5:BK (2.9) BS01 rna N/A GO:0002181 ... Q59TE0 N/A
    845282 8oi5:BK (2.9) BS02 rna N/A GO:0002181 ... Q59TE0 N/A
    845283 8oi5:BK (2.9) BS03 MG N/A GO:0002181 ... Q59TE0 N/A
    845284 8oi5:BL (2.9) BS01 rna N/A GO:0003723 ... A0A1D8PK43 N/A
    845285 8oi5:BL (2.9) BS02 MG N/A GO:0003723 ... A0A1D8PK43 N/A
    845286 8oi5:BM (2.9) BS01 rna N/A GO:0003723 ... A0A1D8PK40 N/A
    845287 8oi5:BM (2.9) BS02 rna N/A GO:0003723 ... A0A1D8PK40 N/A
    845288 8oi5:BN (2.9) BS01 rna N/A GO:0002181 ... A0A1D8PLC9 N/A
    845289 8oi5:BN (2.9) BS02 rna N/A GO:0002181 ... A0A1D8PLC9 N/A
    845290 8oi5:BO (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PGY0 N/A
    845291 8oi5:BO (2.9) BS02 rna N/A GO:0003735 ... A0A1D8PGY0 N/A
    845292 8oi5:BP (2.9) BS01 rna N/A GO:0002181 ... A0A1D8PM41 N/A
    845293 8oi5:BQ (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PPT5 N/A
    845294 8oi5:BQ (2.9) BS02 rna N/A GO:0003735 ... A0A1D8PPT5 N/A
    845295 8oi5:BR (2.9) BS01 rna N/A GO:0002181 ... Q5A6A1 N/A
    845296 8oi5:BS (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PPS1 N/A
    845297 8oi5:BS (2.9) BS02 rna N/A GO:0003735 ... A0A1D8PPS1 N/A
    845298 8oi5:BT (2.9) BS01 rna N/A GO:0002181 ... A0A1D8PCQ5 N/A
    845299 8oi5:BT (2.9) BS02 rna N/A GO:0002181 ... A0A1D8PCQ5 N/A
    845300 8oi5:BT (2.9) BS03 rna N/A GO:0002181 ... A0A1D8PCQ5 N/A
    845301 8oi5:BU (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PFG4 N/A
    845302 8oi5:BV (2.9) BS01 rna N/A GO:0003723 ... A0A1D8PSC5 N/A
    845303 8oi5:BW (2.9) BS01 rna N/A GO:0002181 ... A0A1D8PF57 N/A
    845304 8oi5:BX (2.9) BS01 rna N/A GO:0003723 ... A0A1D8PM75 N/A
    845305 8oi5:BY (2.9) BS01 rna N/A GO:0002181 ... A0A1D8PHF5 N/A
    845306 8oi5:BZ (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PPN6 N/A
    845307 8oi5:C (2.9) BS01 rna N/A GO:0000028 ... O42817 N/A
    845308 8oi5:CA (2.9) BS01 rna N/A GO:0002181 ... A0A1D8PHH4 N/A
    845309 8oi5:CB (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PDZ1 N/A
    845310 8oi5:CB (2.9) BS02 ZN N/A GO:0003735 ... A0A1D8PDZ1 N/A
    845311 8oi5:CC (2.9) BS01 rna N/A GO:0000463 ... A0A1D8PK30 N/A
    845312 8oi5:CC (2.9) BS02 rna N/A GO:0000463 ... A0A1D8PK30 N/A
    845313 8oi5:CD (2.9) BS01 rna N/A GO:0002181 ... A0A1D8PH21 N/A
    845314 8oi5:CE (2.9) BS01 rna N/A GO:0003723 ... A0A1D8PF45 N/A
    845315 8oi5:CE (2.9) BS02 rna N/A GO:0003723 ... A0A1D8PF45 N/A
    845316 8oi5:CE (2.9) BS03 ZN N/A GO:0003723 ... A0A1D8PF45 N/A
    845317 8oi5:CF (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PG16 N/A
    845318 8oi5:CG (2.9) BS01 rna N/A GO:0005737 ... A0A1D8PDT4 N/A
    845319 8oi5:CG (2.9) BS02 rna N/A GO:0005737 ... A0A1D8PDT4 N/A
    845320 8oi5:CH (2.9) BS01 rna N/A GO:0005737 ... A0A1D8PL68 N/A
    845321 8oi5:CH (2.9) BS02 ZN N/A GO:0005737 ... A0A1D8PL68 N/A
    845322 8oi5:CJ (2.9) BS01 rna N/A GO:0005737 ... A0A1D8PEV4 N/A
    845323 8oi5:CJ (2.9) BS02 ZN N/A GO:0005737 ... A0A1D8PEV4 N/A
    845324 8oi5:CK (2.9) BS01 rna N/A GO:0005737 ... A0A1D8PP14 N/A
    845325 8oi5:CK (2.9) BS02 ZN N/A GO:0005737 ... A0A1D8PP14 N/A
    845326 8oi5:CL (2.9) BS01 rna N/A GO:0000723 ... A0A1D8PK71 N/A
    845327 8oi5:CL (2.9) BS02 rna N/A GO:0000723 ... A0A1D8PK71 N/A
    845328 8oi5:CL (2.9) BS03 MG N/A GO:0000723 ... A0A1D8PK71 N/A
    845329 8oi5:CN (2.9) BS01 rna N/A GO:0000028 ... O42817 N/A
    845330 8oi5:CO (2.9) BS01 rna N/A GO:0003735 ... P40910 N/A
    845331 8oi5:CP (2.9) BS01 rna N/A GO:0000054 ... Q5A900 N/A
    845332 8oi5:CQ (2.9) BS01 rna N/A GO:0000054 ... A0A1D8PSV5 N/A
    845333 8oi5:CR (2.9) BS01 rna N/A GO:0003723 ... A0A1D8PCI6 N/A
    845334 8oi5:CS (2.9) BS01 rna N/A GO:0000028 ... Q5AG43 N/A
    845335 8oi5:CT (2.9) BS01 rna N/A GO:0005737 ... A0A1D8PL99 N/A
    845336 8oi5:CU (2.9) BS01 rna N/A GO:0005737 ... Q5AJ93 N/A
    845337 8oi5:CV (2.9) BS01 rna N/A GO:0000462 ... Q59T44 N/A
    845338 8oi5:CV (2.9) BS02 rna N/A GO:0000462 ... Q59T44 N/A
    845339 8oi5:CW (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PGY8 N/A
    845340 8oi5:CX (2.9) BS01 rna N/A GO:0003674 ... A0A1D8PI15 N/A
    845341 8oi5:CY (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PN83 N/A
    845342 8oi5:CZ (2.9) BS01 rna N/A GO:0000028 ... Q5ADQ6 N/A
    845343 8oi5:D (2.9) BS01 rna N/A GO:0003735 ... P40910 N/A
    845344 8oi5:DA (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PPE0 N/A
    845345 8oi5:DA (2.9) BS02 MG N/A GO:0003735 ... A0A1D8PPE0 N/A
    845346 8oi5:DB (2.9) BS01 rna N/A GO:0000028 ... A0A1D8PDT3 N/A
    845347 8oi5:DC (2.9) BS01 rna N/A GO:0000028 ... A0A1D8PK22 N/A
    845348 8oi5:DD (2.9) BS01 rna N/A GO:0000462 ... A0A1D8PCW6 N/A
    845349 8oi5:DE (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PEY9 N/A
    845350 8oi5:DE (2.9) BS02 MG N/A GO:0003735 ... A0A1D8PEY9 N/A
    845351 8oi5:DF (2.9) BS01 rna N/A GO:0005737 ... A0A1D8PQQ5 N/A
    845352 8oi5:DG (2.9) BS01 rna N/A GO:0000028 ... A0A1D8PK61 N/A
    845353 8oi5:DG (2.9) BS02 MG N/A GO:0000028 ... A0A1D8PK61 N/A
    845354 8oi5:DH (2.9) BS01 rna N/A GO:0003735 ... Q5A389 N/A
    845355 8oi5:DI (2.9) BS01 rna N/A GO:0000447 ... A0A1D8PCG7 N/A
    845356 8oi5:DJ (2.9) BS01 rna N/A GO:0003735 ... Q96W54 N/A
    845357 8oi5:DK (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PDU3 N/A
    845358 8oi5:DK (2.9) BS02 PAR N/A GO:0003735 ... A0A1D8PDU3 N/A
    845359 8oi5:DK (2.9) BS03 MG N/A GO:0003735 ... A0A1D8PDU3 N/A
    845360 8oi5:DL (2.9) BS01 rna N/A GO:0005737 ... Q5A7K0 N/A
    845361 8oi5:DL (2.9) BS02 PAR N/A GO:0005737 ... Q5A7K0 N/A
    845362 8oi5:DM (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PNQ6 N/A
    845363 8oi5:DN (2.9) BS01 rna N/A GO:0003729 ... Q5ALV6 N/A
    845364 8oi5:DN (2.9) BS02 ZN N/A GO:0003729 ... Q5ALV6 N/A
    845365 8oi5:DO (2.9) BS01 rna N/A GO:0000028 ... A0A1D8PTI7 N/A
    845366 8oi5:DO (2.9) BS02 ZN N/A GO:0000028 ... A0A1D8PTI7 N/A
    845367 8oi5:DP (2.9) BS01 rna N/A GO:0000028 ... A0A1D8PQN0 N/A
    845368 8oi5:DQ (2.9) BS01 rna N/A GO:0002181 ... A0A1D8PTR4 N/A
    845369 8oi5:DQ (2.9) BS02 ZN N/A GO:0002181 ... A0A1D8PTR4 N/A
    845370 8oi5:DR (2.9) BS01 rna N/A GO:0005737 ... A0A1D8PSK2 N/A
    845371 8oi5:E (2.9) BS01 rna N/A GO:0000054 ... Q5A900 N/A
    845372 8oi5:F (2.9) BS01 rna N/A GO:0000054 ... A0A1D8PSV5 N/A
    845373 8oi5:G (2.9) BS01 rna N/A GO:0003723 ... A0A1D8PCI6 N/A
    845374 8oi5:H (2.9) BS01 rna N/A GO:0000028 ... Q5AG43 N/A
    845375 8oi5:I (2.9) BS01 rna N/A GO:0005737 ... A0A1D8PL99 N/A
    845376 8oi5:J (2.9) BS01 rna N/A GO:0005737 ... Q5AJ93 N/A
    845377 8oi5:K (2.9) BS01 rna N/A GO:0000462 ... Q59T44 N/A
    845378 8oi5:K (2.9) BS02 rna N/A GO:0000462 ... Q59T44 N/A
    845379 8oi5:L (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PGY8 N/A
    845380 8oi5:M (2.9) BS01 rna N/A GO:0003674 ... A0A1D8PI15 N/A
    845381 8oi5:N (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PN83 N/A
    845382 8oi5:O (2.9) BS01 rna N/A GO:0000028 ... Q5ADQ6 N/A
    845383 8oi5:P (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PPE0 N/A
    845384 8oi5:Q (2.9) BS01 rna N/A GO:0000028 ... A0A1D8PDT3 N/A
    845385 8oi5:R (2.9) BS01 rna N/A GO:0000028 ... A0A1D8PK22 N/A
    845386 8oi5:R (2.9) BS02 rna N/A GO:0000028 ... A0A1D8PK22 N/A
    845387 8oi5:S (2.9) BS01 rna N/A GO:0000462 ... A0A1D8PCW6 N/A
    845388 8oi5:T (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PEY9 N/A
    845389 8oi5:U (2.9) BS01 rna N/A GO:0005737 ... A0A1D8PQQ5 N/A
    845390 8oi5:V (2.9) BS01 rna N/A GO:0000028 ... A0A1D8PK61 N/A
    845391 8oi5:W (2.9) BS01 rna N/A GO:0003735 ... Q5A389 N/A
    845392 8oi5:Y (2.9) BS01 rna N/A GO:0003735 ... Q96W54 N/A
    845393 8oi5:Z (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PDU3 N/A
    845394 8oi5:a (2.9) BS01 rna N/A GO:0005737 ... Q5A7K0 N/A
    845395 8oi5:a (2.9) BS02 PAR N/A GO:0005737 ... Q5A7K0 N/A
    845396 8oi5:b (2.9) BS01 rna N/A GO:0003735 ... A0A1D8PNQ6 N/A
    845397 8oi5:c (2.9) BS01 rna N/A GO:0003729 ... Q5ALV6 N/A
    845398 8oi5:c (2.9) BS02 ZN N/A GO:0003729 ... Q5ALV6 N/A
    845399 8oi5:d (2.9) BS01 rna N/A GO:0000028 ... A0A1D8PTI7 N/A
    845400 8oi5:d (2.9) BS02 ZN N/A GO:0000028 ... A0A1D8PTI7 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).