SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    845401 8jzf:b (2.7) BS15 CLA 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845402 8jzf:b (2.7) BS16 CLA 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845403 8jzf:b (2.7) BS17 CLA 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845404 8jzf:b (2.7) BS18 CLA 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845405 8jzf:b (2.7) BS19 CLA 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845406 8jzf:b (2.7) BS20 CLA 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845407 8jzf:b (2.7) BS21 CLA 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845408 8jzf:b (2.7) BS22 CLA 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845409 8jzf:b (2.7) BS23 CLA 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845410 8jzf:b (2.7) BS24 CLA 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845411 8jzf:b (2.7) BS25 CLA 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845412 8jzf:b (2.7) BS26 CLA 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845413 8jzf:b (2.7) BS27 CLA 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845414 8jzf:b (2.7) BS28 CLA 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845415 8jzf:b (2.7) BS29 CLA 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845416 8jzf:b (2.7) BS30 CLA 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845417 8jzf:b (2.7) BS31 CLA 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845418 8jzf:b (2.7) BS32 CLA 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845419 8jzf:b (2.7) BS33 CLA 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845420 8jzf:b (2.7) BS34 CLA 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845421 8jzf:b (2.7) BS35 CLA 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845422 8jzf:b (2.7) BS36 CLA 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845423 8jzf:b (2.7) BS37 CLA 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845424 8jzf:b (2.7) BS38 PQN 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845425 8jzf:b (2.7) BS39 DD6 1.97.1.12 GO:0009535 ... A0A0A0N2P0 38319970
    845426 8jzf:c (2.7) BS01 SF4 1.97.1.12 GO:0009055 ... A0ACD6B9G1 38319970
    845427 8jzf:c (2.7) BS02 SF4 1.97.1.12 GO:0009055 ... A0ACD6B9G1 38319970
    845428 8jzf:f (2.7) BS01 CLA ? GO:0009522 ... A0ACD6B9G5 38319970
    845429 8jzf:f (2.7) BS02 CLA ? GO:0009522 ... A0ACD6B9G5 38319970
    845430 8jzf:f (2.7) BS03 CLA ? GO:0009522 ... A0ACD6B9G5 38319970
    845431 8jzf:f (2.7) BS04 CLA ? GO:0009522 ... A0ACD6B9G5 38319970
    845432 8jzf:f (2.7) BS05 CLA ? GO:0009522 ... A0ACD6B9G5 38319970
    845433 8jzf:f (2.7) BS06 CLA ? GO:0009522 ... A0ACD6B9G5 38319970
    845434 8jzf:f (2.7) BS07 CLA ? GO:0009522 ... A0ACD6B9G5 38319970
    845435 8jzf:f (2.7) BS08 CLA ? GO:0009522 ... A0ACD6B9G5 38319970
    845436 8jzf:h (2.7) BS01 CLA ? N/A A0ACD6B9G4 38319970
    845437 8jzf:h (2.7) BS02 CLA ? N/A A0ACD6B9G4 38319970
    845438 8jzf:h (2.7) BS03 UIX ? N/A A0ACD6B9G4 38319970
    845439 8jzf:h (2.7) BS04 CLA ? N/A A0ACD6B9G4 38319970
    845440 8jzf:h (2.7) BS05 DD6 ? N/A A0ACD6B9G4 38319970
    845441 8jzf:h (2.7) BS06 CLA ? N/A A0ACD6B9G4 38319970
    845442 8jzf:h (2.7) BS07 CLA ? N/A A0ACD6B9G4 38319970
    845443 8jzf:i (2.7) BS01 CLA ? GO:0009522 ... A0ACD6B9G3 38319970
    845444 8jzf:i (2.7) BS02 CLA ? GO:0009522 ... A0ACD6B9G3 38319970
    845445 8jzf:j (2.7) BS01 CLA ? GO:0009522 ... A0A812LLR4 38319970
    845446 8jzf:j (2.7) BS02 CLA ? GO:0009522 ... A0A812LLR4 38319970
    845447 8jzf:j (2.7) BS03 CLA ? GO:0009522 ... A0A812LLR4 38319970
    845448 8jzf:j (2.7) BS04 CLA ? GO:0009522 ... A0A812LLR4 38319970
    845449 8jzf:j (2.7) BS05 PID ? GO:0009522 ... A0A812LLR4 38319970
    845450 8jzf:j (2.7) BS06 CLA ? GO:0009522 ... A0A812LLR4 38319970
    845451 8jzf:j (2.7) BS07 CLA ? GO:0009522 ... A0A812LLR4 38319970
    845452 8jzf:l (2.7) BS01 CLA ? GO:0009522 ... A0ACD6B9G6 38319970
    845453 8jzf:l (2.7) BS02 CLA ? GO:0009522 ... A0ACD6B9G6 38319970
    845454 8jzf:l (2.7) BS03 CLA ? GO:0009522 ... A0ACD6B9G6 38319970
    845455 8jzf:l (2.7) BS04 CLA ? GO:0009522 ... A0ACD6B9G6 38319970
    845456 8jzf:l (2.7) BS05 CLA ? GO:0009522 ... A0ACD6B9G6 38319970
    845457 8jzf:l (2.7) BS06 CLA ? GO:0009522 ... A0ACD6B9G6 38319970
    845458 8jzf:l (2.7) BS07 CLA ? GO:0009522 ... A0ACD6B9G6 38319970
    845459 8jzf:l (2.7) BS08 CLA ? GO:0009522 ... A0ACD6B9G6 38319970
    845460 8jzf:l (2.7) BS09 CLA ? GO:0009522 ... A0ACD6B9G6 38319970
    845461 8jzf:l (2.7) BS10 CLA ? GO:0009522 ... A0ACD6B9G6 38319970
    845462 8jzf:l (2.7) BS11 CLA ? GO:0009522 ... A0ACD6B9G6 38319970
    845463 8jzf:l (2.7) BS12 CLA ? GO:0009522 ... A0ACD6B9G6 38319970
    845464 8jzf:l (2.7) BS13 CLA ? GO:0009522 ... A0ACD6B9G6 38319970
    845465 8jzf:l (2.7) BS14 UIX ? GO:0009522 ... A0ACD6B9G6 38319970
    845466 8jzf:m (2.7) BS01 CLA ? N/A A0A812M556 38319970
    845467 8jzf:m (2.7) BS02 CLA ? N/A A0A812M556 38319970
    845468 8jzg:A (2.39) BS01 ADN 2.5.1.6 GO:0000287 ... Q9K5E4 37846083
    845469 8jzg:A (2.39) BS02 3PO 2.5.1.6 GO:0000287 ... Q9K5E4 37846083
    845470 8jzg:A (2.39) BS03 SAM 2.5.1.6 GO:0000287 ... Q9K5E4 37846083
    845471 8jzg:A (2.39) BS04 POP 2.5.1.6 GO:0000287 ... Q9K5E4 37846083
    845472 8jzg:A (2.39) BS05 3PO 2.5.1.6 GO:0000287 ... Q9K5E4 37846083
    845473 8jzg:B (2.39) BS01 3PO 2.5.1.6 GO:0000287 ... Q9K5E4 37846083
    845474 8jzg:B (2.39) BS02 POP 2.5.1.6 GO:0000287 ... Q9K5E4 37846083
    845475 8jzg:B (2.39) BS03 ADN 2.5.1.6 GO:0000287 ... Q9K5E4 37846083
    845476 8jzg:B (2.39) BS04 3PO 2.5.1.6 GO:0000287 ... Q9K5E4 37846083
    845477 8jzg:B (2.39) BS05 SAM 2.5.1.6 GO:0000287 ... Q9K5E4 37846083
    845478 8jzg:C (2.39) BS01 POP 2.5.1.6 GO:0000287 ... Q9K5E4 37846083
    845479 8jzg:C (2.39) BS02 ADN 2.5.1.6 GO:0000287 ... Q9K5E4 37846083
    845480 8jzg:C (2.39) BS03 3PO 2.5.1.6 GO:0000287 ... Q9K5E4 37846083
    845481 8jzg:C (2.39) BS04 SAM 2.5.1.6 GO:0000287 ... Q9K5E4 37846083
    845482 8jzg:C (2.39) BS05 3PO 2.5.1.6 GO:0000287 ... Q9K5E4 37846083
    845483 8jzg:D (2.39) BS01 SAM 2.5.1.6 GO:0000287 ... Q9K5E4 37846083
    845484 8jzg:D (2.39) BS02 POP 2.5.1.6 GO:0000287 ... Q9K5E4 37846083
    845485 8jzg:D (2.39) BS03 3PO 2.5.1.6 GO:0000287 ... Q9K5E4 37846083
    845486 8jzg:D (2.39) BS04 ADN 2.5.1.6 GO:0000287 ... Q9K5E4 37846083
    845487 8jzg:D (2.39) BS05 3PO 2.5.1.6 GO:0000287 ... Q9K5E4 37846083
    845488 8jzg:D (2.39) BS06 SAM 2.5.1.6 GO:0000287 ... Q9K5E4 37846083
    845489 8jzk:A (2.55004) BS01 GSH 2.5.1.18 GO:0004364 ... A0A5N5L538 N/A
    845490 8jzn:A (2.47) BS01 AV0 2.4.1.34 GO:0000148 ... P38631 37703377
    845491 8jzn:A (2.47) BS02 AV0 2.4.1.34 GO:0000148 ... P38631 37703377
    845492 8jzn:A (2.47) BS03 ERG 2.4.1.34 GO:0000148 ... P38631 37703377
    845493 8jzn:A (2.47) BS04 ERG 2.4.1.34 GO:0000148 ... P38631 37703377
    845494 8jzn:A (2.47) BS05 ERG 2.4.1.34 GO:0000148 ... P38631 37703377
    845495 8jzn:A (2.47) BS06 ERG 2.4.1.34 GO:0000148 ... P38631 37703377
    845496 8jzn:A (2.47) BS07 ERG 2.4.1.34 GO:0000148 ... P38631 37703377
    845497 8jzn:A (2.47) BS08 ERG 2.4.1.34 GO:0000148 ... P38631 37703377
    845498 8jzn:A (2.47) BS09 ERG 2.4.1.34 GO:0000148 ... P38631 37703377
    845499 8jzn:A (2.47) BS10 ERG 2.4.1.34 GO:0000148 ... P38631 37703377
    845500 8jzn:A (2.47) BS11 ERG 2.4.1.34 GO:0000148 ... P38631 37703377
    845501 8jzn:A (2.47) BS12 ERG 2.4.1.34 GO:0000148 ... P38631 37703377
    845502 8jzs:A (2.95) BS01 CLR ? GO:0005290 ... Q8N697 37863913
    845503 8jzs:A (2.95) BS02 CLR ? GO:0005290 ... Q8N697 37863913
    845504 8jzs:A (2.95) BS03 CLR ? GO:0005290 ... Q8N697 37863913
    845505 8jzs:B (2.95) BS01 CLR ? GO:0005290 ... Q8N697 37863913
    845506 8jzs:B (2.95) BS02 CLR ? GO:0005290 ... Q8N697 37863913
    845507 8jzs:B (2.95) BS03 CLR ? GO:0005290 ... Q8N697 37863913
    845508 8jzu:A (3.05) BS01 peptide ? GO:0005290 ... Q8N697 37863913
    845509 8jzv:A (1.5) BS01 peptide ? GO:0003677 ... P27694 37668474
    845510 8jzw:A (1.8) BS01 peptide N/A GO:0005634 ... Q13185 N/A
    845511 8jzw:A (1.8) BS02 peptide N/A GO:0005634 ... Q13185 N/A
    845512 8jzw:B (1.8) BS01 peptide N/A GO:0005634 ... Q13185 N/A
    845513 8jzw:C (1.8) BS01 peptide N/A GO:0005634 ... Q13185 N/A
    845514 8jzw:C (1.8) BS02 peptide N/A GO:0005634 ... Q13185 N/A
    845515 8jzw:D (1.8) BS01 peptide N/A GO:0005634 ... Q13185 N/A
    845516 8jzx:A (2.5) BS01 CLR ? GO:0005290 ... Q8N697 37863876
    845517 8jzx:A (2.5) BS02 Q09 ? GO:0005290 ... Q8N697 37863876
    845518 8jzx:A (2.5) BS03 CLR ? GO:0005290 ... Q8N697 37863876
    845519 8jzx:A (2.5) BS04 CLR ? GO:0005290 ... Q8N697 37863876
    845520 8jzx:A (2.5) BS05 CLR ? GO:0005290 ... Q8N697 37863876
    845521 8jzx:B (2.5) BS01 CLR ? GO:0005290 ... Q8N697 37863876
    845522 8jzx:B (2.5) BS02 CLR ? GO:0005290 ... Q8N697 37863876
    845523 8jzx:B (2.5) BS03 CLR ? GO:0005290 ... Q8N697 37863876
    845524 8jzx:B (2.5) BS04 Q09 ? GO:0005290 ... Q8N697 37863876
    845525 8jzy:A (1.5) BS01 peptide ? GO:0003677 ... P27694 37668474
    845526 8k06:A (1.845) BS01 PSU 4.2.1.70 GO:0001522 ... Q84K35 38117089
    845527 8k06:B (1.845) BS01 RP5 4.2.1.70 GO:0001522 ... Q84K35 38117089
    845528 8k06:C (1.845) BS01 PSU 4.2.1.70 GO:0001522 ... Q84K35 38117089
    845529 8k08:A (3.5) BS01 8YG N/A GO:0002238 ... A0A0A6ZFY4 39887940
    845530 8k08:B (3.5) BS01 8YG N/A GO:0002238 ... A0A0A6ZFY4 39887940
    845531 8k09:A (3.36) BS01 VEI N/A GO:0002238 ... A0A0A6ZFY4 39887940
    845532 8k09:C (3.36) BS01 VEI N/A GO:0002238 ... A0A0A6ZFY4 39887940
    845533 8k0e:A (3.65) BS01 FE N/A GO:0005506 ... Q32P28 39245686
    845534 8k0f:A (3.37) BS01 FE N/A GO:0005506 ... Q32P28 39245686
    845535 8k0g:A (3.8) BS01 peptide N/A GO:0000502 ... P35998 41093839
    845536 8k0g:A (3.8) BS02 ATP N/A GO:0000502 ... P35998 41093839
    845537 8k0g:B (3.8) BS01 peptide N/A GO:0000502 ... P62191 41093839
    845538 8k0g:B (3.8) BS02 ATP N/A GO:0000502 ... P62191 41093839
    845539 8k0g:C (3.8) BS01 peptide N/A GO:0000502 ... P62195 41093839
    845540 8k0g:C (3.8) BS02 ATP N/A GO:0000502 ... P62195 41093839
    845541 8k0g:C (3.8) BS03 ADP N/A GO:0000502 ... P62195 41093839
    845542 8k0g:D (3.8) BS01 peptide N/A GO:0000502 ... P43686 41093839
    845543 8k0g:D (3.8) BS02 ADP N/A GO:0000502 ... P43686 41093839
    845544 8k0g:F (3.8) BS01 ATP N/A GO:0000502 ... P17980 41093839
    845545 8k0k:A (2.995) BS01 rna N/A N/A M1R2X3 38977786
    845546 8k0k:B (2.995) BS01 rna N/A N/A M1QWL5 38977786
    845547 8k0k:C (2.995) BS01 rna N/A N/A M1Q7R8 38977786
    845548 8k0k:D (2.995) BS01 rna N/A N/A M1Q7R8 38977786
    845549 8k0k:E (2.995) BS01 rna N/A N/A M1Q7R8 38977786
    845550 8k0k:F (2.995) BS01 rna N/A N/A M1Q7R8 38977786
    845551 8k0k:G (2.995) BS01 rna N/A N/A M1Q7R8 38977786
    845552 8k0k:H (2.995) BS01 rna N/A N/A M1Q7R8 38977786
    845553 8k0k:I (2.995) BS01 rna N/A GO:0004519 ... M1R9H3 38977786
    845554 8k0m:A (3.17) BS01 FE N/A GO:0005506 ... Q32P28 39245686
    845555 8k0m:A (3.17) BS02 AKG N/A GO:0005506 ... Q32P28 39245686
    845556 8k14:A (1.28) BS01 VFI ? N/A O60885 37992518
    845557 8k16:A (3.1) BS01 ATP ? GO:0005267 ... O32080 38719864
    845558 8k16:B (3.1) BS01 ATP ? GO:0005267 ... O32080 38719864
    845559 8k17:A (3.18) BS01 FE N/A GO:0005506 ... Q32P28 39245686
    845560 8k17:B (3.18) BS01 peptide N/A N/A O75718 39245686
    845561 8k1g:A (2.09) BS01 ZN 1.1.1.6 GO:0005829 ... A6TGD6 N/A
    845562 8k1h:A (2.1) BS01 ZN 1.1.1.6 GO:0005829 ... A6TGD6 N/A
    845563 8k1h:A (2.1) BS02 NAD 1.1.1.6 GO:0005829 ... A6TGD6 N/A
    845564 8k1j:A (3.0) BS01 Y01 ? GO:0005267 ... Q9NPC2 38630723
    845565 8k1j:A (3.0) BS02 K ? GO:0005267 ... Q9NPC2 38630723
    845566 8k1j:A (3.0) BS03 K ? GO:0005267 ... Q9NPC2 38630723
    845567 8k1j:A (3.0) BS04 K ? GO:0005267 ... Q9NPC2 38630723
    845568 8k1j:A (3.0) BS05 K ? GO:0005267 ... Q9NPC2 38630723
    845569 8k1j:B (3.0) BS01 Y01 ? GO:0005267 ... Q9NPC2 38630723
    845570 8k1j:B (3.0) BS02 K ? GO:0005267 ... Q9NPC2 38630723
    845571 8k1j:B (3.0) BS03 K ? GO:0005267 ... Q9NPC2 38630723
    845572 8k1j:B (3.0) BS04 K ? GO:0005267 ... Q9NPC2 38630723
    845573 8k1j:B (3.0) BS05 K ? GO:0005267 ... Q9NPC2 38630723
    845574 8k1j:B (3.0) BS06 Y01 ? GO:0005267 ... Q9NPC2 38630723
    845575 8k1j:B (3.0) BS07 Y01 ? GO:0005267 ... Q9NPC2 38630723
    845576 8k1k:A (3.0) BS01 ATP ? GO:0005267 ... O32080 38719864
    845577 8k1k:B (3.0) BS01 ATP ? GO:0005267 ... O32080 38719864
    845578 8k1l:A (3.44) BS01 ALF 7.2.2.13 GO:0000166 ... P17326 38079564
    845579 8k1n:C (3.0) BS01 RFP N/A GO:0005886 ... O05318 39226350
    845580 8k1o:B (2.9) BS01 ANP N/A GO:0005524 ... O86311 39226350
    845581 8k1o:B (2.9) BS02 ANP N/A GO:0005524 ... O86311 39226350
    845582 8k1o:C (2.9) BS01 ANP N/A GO:0005524 ... O86311 39226350
    845583 8k1o:C (2.9) BS02 ANP N/A GO:0005524 ... O86311 39226350
    845584 8k1p:B (3.4) BS01 ADP N/A GO:0005524 ... O86311 N/A
    845585 8k1p:B (3.4) BS02 ATP N/A GO:0005524 ... O86311 N/A
    845586 8k1p:C (3.4) BS01 ATP N/A GO:0005524 ... O86311 N/A
    845587 8k1q:A (3.68) BS01 Y01 ? GO:0005267 ... Q9NPC2 38630723
    845588 8k1q:A (3.68) BS02 Y01 ? GO:0005267 ... Q9NPC2 38630723
    845589 8k1q:A (3.68) BS03 Y01 ? GO:0005267 ... Q9NPC2 38630723
    845590 8k1q:A (3.68) BS04 K ? GO:0005267 ... Q9NPC2 38630723
    845591 8k1q:A (3.68) BS05 K ? GO:0005267 ... Q9NPC2 38630723
    845592 8k1q:B (3.68) BS01 K ? GO:0005267 ... Q9NPC2 38630723
    845593 8k1q:B (3.68) BS02 K ? GO:0005267 ... Q9NPC2 38630723
    845594 8k1q:B (3.68) BS03 Y01 ? GO:0005267 ... Q9NPC2 38630723
    845595 8k1q:B (3.68) BS04 Y01 ? GO:0005267 ... Q9NPC2 38630723
    845596 8k1q:B (3.68) BS05 Y01 ? GO:0005267 ... Q9NPC2 38630723
    845597 8k1s:A (2.83) BS01 ADP ? GO:0005267 ... O32080 38719864
    845598 8k1s:B (2.83) BS01 ADP ? GO:0005267 ... O32080 38719864
    845599 8k1s:C (2.83) BS01 ADP ? GO:0005267 ... O32080 38719864
    845600 8k1s:D (2.83) BS01 ADP ? GO:0005267 ... O32080 38719864

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).