SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    845401 8oi5:e (2.9) BS01 rna N/A GO:0000028 ... A0A1D8PQN0 N/A
    845402 8oi5:f (2.9) BS01 rna N/A GO:0002181 ... A0A1D8PTR4 N/A
    845403 8oi5:f (2.9) BS02 ZN N/A GO:0002181 ... A0A1D8PTR4 N/A
    845404 8oi5:f (2.9) BS03 MG N/A GO:0002181 ... A0A1D8PTR4 N/A
    845405 8oi5:g (2.9) BS01 rna N/A GO:0005737 ... A0A1D8PSK2 N/A
    845406 8oi5:h (2.9) BS01 rna N/A GO:0003735 ... Q5A109 N/A
    845407 8oi5:i (2.9) BS01 rna N/A GO:0000723 ... A0A1D8PK71 N/A
    845408 8oi5:i (2.9) BS02 rna N/A GO:0000723 ... A0A1D8PK71 N/A
    845409 8oi5:j (2.9) BS01 rna N/A GO:0002181 ... A0A1D8PF08 N/A
    845410 8oi5:j (2.9) BS02 rna N/A GO:0002181 ... A0A1D8PF08 N/A
    845411 8oi5:j (2.9) BS03 MG N/A GO:0002181 ... A0A1D8PF08 N/A
    845412 8oi5:k (2.9) BS01 rna N/A GO:0000027 ... Q59LS1 N/A
    845413 8oi5:l (2.9) BS01 rna N/A GO:0003723 ... A0A1D8PFV1 N/A
    845414 8oi5:l (2.9) BS02 rna N/A GO:0003723 ... A0A1D8PFV1 N/A
    845415 8oi5:l (2.9) BS03 PAR N/A GO:0003723 ... A0A1D8PFV1 N/A
    845416 8oi5:m (2.9) BS01 rna N/A GO:0000027 ... Q5AGZ7 N/A
    845417 8oi5:m (2.9) BS02 rna N/A GO:0000027 ... Q5AGZ7 N/A
    845418 8oi5:n (2.9) BS01 rna N/A GO:0002181 ... A0A1D8PCX8 N/A
    845419 8oi5:o (2.9) BS01 rna N/A GO:0000463 ... A0A1D8PDL6 N/A
    845420 8oi5:o (2.9) BS02 rna N/A GO:0000463 ... A0A1D8PDL6 N/A
    845421 8oi5:p (2.9) BS01 rna N/A GO:0000470 ... Q5ANA1 N/A
    845422 8oi5:p (2.9) BS02 rna N/A GO:0000470 ... Q5ANA1 N/A
    845423 8oi5:q (2.9) BS01 rna N/A GO:0002181 ... Q5AEN2 N/A
    845424 8oi5:r (2.9) BS01 rna N/A GO:0003735 ... Q5AIB8 N/A
    845425 8oi5:r (2.9) BS02 rna N/A GO:0003735 ... Q5AIB8 N/A
    845426 8oi5:s (2.9) BS01 rna N/A GO:0003723 ... A0A1D8PHW1 N/A
    845427 8oi5:s (2.9) BS02 rna N/A GO:0003723 ... A0A1D8PHW1 N/A
    845428 8oi5:t (2.9) BS01 rna N/A GO:0003723 ... O59931 N/A
    845429 8oi5:t (2.9) BS02 rna N/A GO:0003723 ... O59931 N/A
    845430 8oi5:u (2.9) BS01 rna N/A GO:0003723 ... A0A1D8PFL9 N/A
    845431 8oi5:v (2.9) BS01 rna N/A GO:0002181 ... Q5A6R1 N/A
    845432 8oi5:v (2.9) BS02 rna N/A GO:0002181 ... Q5A6R1 N/A
    845433 8oi5:v (2.9) BS03 MG N/A GO:0002181 ... Q5A6R1 N/A
    845434 8oi5:v (2.9) BS04 MG N/A GO:0002181 ... Q5A6R1 N/A
    845435 8oi5:w (2.9) BS01 rna N/A GO:0003729 ... Q5AB87 N/A
    845436 8oi5:w (2.9) BS02 MG N/A GO:0003729 ... Q5AB87 N/A
    845437 8oi5:x (2.9) BS01 rna N/A GO:0002181 ... Q59TE0 N/A
    845438 8oi5:x (2.9) BS02 rna N/A GO:0002181 ... Q59TE0 N/A
    845439 8oi5:x (2.9) BS03 MG N/A GO:0002181 ... Q59TE0 N/A
    845440 8oi5:y (2.9) BS01 rna N/A GO:0003723 ... A0A1D8PK43 N/A
    845441 8oi5:z (2.9) BS01 rna N/A GO:0003723 ... A0A1D8PK40 N/A
    845442 8oi5:z (2.9) BS02 rna N/A GO:0003723 ... A0A1D8PK40 N/A
    845443 8oi6:A (3.59) BS01 peptide 3.6.4.- GO:0005515 ... P60712 37749275
    845444 8oi6:A (3.59) BS02 ADP 3.6.4.- GO:0005515 ... P60712 37749275
    845445 8oi6:B (3.59) BS01 peptide 3.6.4.- GO:0005515 ... P60712 37749275
    845446 8oi6:B (3.59) BS02 peptide 3.6.4.- GO:0005515 ... P60712 37749275
    845447 8oi6:B (3.59) BS03 ADP 3.6.4.- GO:0005515 ... P60712 37749275
    845448 8oi6:C (3.59) BS01 peptide 3.6.4.- GO:0005515 ... P60712 37749275
    845449 8oi6:C (3.59) BS02 peptide 3.6.4.- GO:0005515 ... P60712 37749275
    845450 8oi6:C (3.59) BS03 ADP 3.6.4.- GO:0005515 ... P60712 37749275
    845451 8oi6:D (3.59) BS01 peptide 3.6.4.- GO:0005515 ... P60712 37749275
    845452 8oi6:D (3.59) BS02 ADP 3.6.4.- GO:0005515 ... P60712 37749275
    845453 8oi7:A (1.85) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    845454 8oi7:A (1.85) BS02 MG ? GO:0005829 ... A2FTT0 37482279
    845455 8oi7:B (1.85) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    845456 8oi7:B (1.85) BS02 MG ? GO:0005829 ... A2FTT0 37482279
    845457 8oi8:A (2.28) BS01 ADP 3.6.4.- GO:0000776 ... P60709 37749275
    845458 8oi8:B (2.28) BS01 ADP 3.6.4.- GO:0000776 ... P60709 37749275
    845459 8oi8:C (2.28) BS01 ADP 3.6.4.- GO:0000776 ... P60709 37749275
    845460 8oi8:D (2.28) BS01 ADP 3.6.4.- GO:0000776 ... P60709 37749275
    845461 8oi8:E (2.28) BS01 ADP 3.6.4.- GO:0000776 ... P60709 37749275
    845462 8oi9:A (1.95) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    845463 8oi9:A (1.95) BS02 38T ? GO:0005829 ... A2FTT0 37482279
    845464 8oi9:A (1.95) BS03 PIN ? GO:0005829 ... A2FTT0 37482279
    845465 8oi9:A (1.95) BS04 MG ? GO:0005829 ... A2FTT0 37482279
    845466 8oi9:B (1.95) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    845467 8oi9:B (1.95) BS02 38T ? GO:0005829 ... A2FTT0 37482279
    845468 8oi9:B (1.95) BS03 MG ? GO:0005829 ... A2FTT0 37482279
    845469 8oia:A (2.3) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    845470 8oia:A (2.3) BS02 RIB ? GO:0005829 ... A2FTT0 37482279
    845471 8oia:B (2.3) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    845472 8oia:B (2.3) BS02 RIB ? GO:0005829 ... A2FTT0 37482279
    845473 8oia:C (2.3) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    845474 8oia:C (2.3) BS02 RIB ? GO:0005829 ... A2FTT0 37482279
    845475 8oia:D (2.3) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    845476 8oia:D (2.3) BS02 RIB ? GO:0005829 ... A2FTT0 37482279
    845477 8oib:A (2.44) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    845478 8oib:B (2.44) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    845479 8oib:C (2.44) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    845480 8oib:D (2.44) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    845481 8oic:A (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    845482 8oic:B (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    845483 8oic:C (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    845484 8oic:D (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    845485 8oic:E (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    845486 8oic:F (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    845487 8oic:G (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    845488 8oic:H (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    845489 8oid:A (2.3) BS01 ADP 3.6.4.- GO:0000776 ... P60709 37749275
    845490 8oid:B (2.3) BS01 ADP 3.6.4.- GO:0000776 ... P60709 37749275
    845491 8oid:C (2.3) BS01 ADP 3.6.4.- GO:0000776 ... P60709 37749275
    845492 8oid:D (2.3) BS01 ADP 3.6.4.- GO:0000776 ... P60709 37749275
    845493 8oid:E (2.3) BS01 ADP 3.6.4.- GO:0000776 ... P60709 37749275
    845494 8oie:A (2.35) BS01 S5Q 1.18.6.1 GO:0005524 ... D5ANJ7 38062208
    845495 8oie:A (2.35) BS02 CLF 1.18.6.1 GO:0005524 ... D5ANJ7 38062208
    845496 8oie:C (2.35) BS01 CLF 1.18.6.1 GO:0009399 ... D5ANJ9 38062208
    845497 8oie:D (2.35) BS01 ADP 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    845498 8oie:D (2.35) BS02 AF3 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    845499 8oie:D (2.35) BS03 SF4 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    845500 8oie:D (2.35) BS04 ADP 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    845501 8oie:E (2.35) BS01 ADP 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    845502 8oie:E (2.35) BS02 SF4 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    845503 8oie:E (2.35) BS03 ADP 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    845504 8oie:E (2.35) BS04 AF3 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    845505 8oie:F (2.35) BS01 S5Q 1.18.6.1 GO:0005524 ... D5ANJ7 38062208
    845506 8oie:F (2.35) BS02 CLF 1.18.6.1 GO:0005524 ... D5ANJ7 38062208
    845507 8oie:H (2.35) BS01 CLF 1.18.6.1 GO:0009399 ... D5ANJ9 38062208
    845508 8oie:I (2.35) BS01 ADP 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    845509 8oie:I (2.35) BS02 AF3 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    845510 8oie:I (2.35) BS03 SF4 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    845511 8oie:I (2.35) BS04 ADP 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    845512 8oie:J (2.35) BS01 ADP 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    845513 8oie:J (2.35) BS02 SF4 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    845514 8oie:J (2.35) BS03 ADP 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    845515 8oie:J (2.35) BS04 AF3 1.18.6.1 GO:0005524 ... D5ANJ6 38062208
    845516 8oif:A (3.5) BS01 AMP 6.2.1.- GO:0004842 ... P41226 38042859
    845517 8oih:AAA (1.86) BS01 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845518 8oih:AAA (1.86) BS02 OXY 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845519 8oih:BBB (1.86) BS01 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845520 8oih:CCC (1.86) BS01 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845521 8oih:DDD (1.86) BS01 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845522 8oih:DDD (1.86) BS02 OXY 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845523 8oij:A (2.0) BS01 peptide ? N/A Q23972 37523566
    845524 8oij:A (2.0) BS02 peptide ? N/A Q23972 37523566
    845525 8oij:B (2.0) BS01 peptide ? N/A Q23972 37523566
    845526 8oij:B (2.0) BS02 peptide ? N/A Q23972 37523566
    845527 8oin:AB (3.6) BS01 rna ? GO:0003735 ... F1SG95 37141370
    845528 8oin:AC (3.6) BS01 rna ? GO:0005739 ... A0A287ANU4 37141370
    845529 8oin:AD (3.6) BS01 rna ? GO:0005634 ... A0A8D1P8R7 37141370
    845530 8oin:AD (3.6) BS02 rna ? GO:0005634 ... A0A8D1P8R7 37141370
    845531 8oin:AE (3.6) BS01 rna ? GO:0003735 ... A0A5K1V0G5 37141370
    845532 8oin:AF (3.6) BS01 rna ? GO:0000028 ... A0A286ZJ25 37141370
    845533 8oin:AH (3.6) BS01 rna ? GO:0005739 ... F1RUU2 37141370
    845534 8oin:AJ (3.6) BS01 rna ? GO:0003735 ... A0A0M3KL52 37141370
    845535 8oin:AK (3.6) BS01 rna ? GO:0003735 ... A0A0M3KL53 37141370
    845536 8oin:AL (3.6) BS01 rna ? GO:0003735 ... A0A287AKS1 37141370
    845537 8oin:AM (3.6) BS01 rna ? GO:0003735 ... A0A480JTD7 37141370
    845538 8oin:AN (3.6) BS01 rna ? GO:0003735 ... A0A8D1IXU1 37141370
    845539 8oin:AO (3.6) BS01 rna ? GO:0003735 ... Q767K8 37141370
    845540 8oin:AO (3.6) BS02 ZN ? GO:0003735 ... Q767K8 37141370
    845541 8oin:AP (3.6) BS01 rna ? GO:0003735 ... A0A0M3KL54 37141370
    845542 8oin:AP (3.6) BS02 FES ? GO:0003735 ... A0A0M3KL54 37141370
    845543 8oin:AQ (3.6) BS01 rna ? GO:0003735 ... A0A286ZNB3 37141370
    845544 8oin:AS (3.6) BS01 rna ? GO:0003735 ... A0A287AEW3 37141370
    845545 8oin:AT (3.6) BS01 rna ? GO:0003735 ... A0A0M3KL55 37141370
    845546 8oin:AT (3.6) BS02 FES ? GO:0003735 ... A0A0M3KL55 37141370
    845547 8oin:AU (3.6) BS01 rna ? GO:0005763 ... A0A287AY01 37141370
    845548 8oin:AV (3.6) BS01 rna ? GO:0005739 ... A0A5G2R1I0 37141370
    845549 8oin:AX (3.6) BS01 rna ? GO:0005654 ... A0A8D1XNL0 37141370
    845550 8oin:AX (3.6) BS02 ATP ? GO:0005654 ... A0A8D1XNL0 37141370
    845551 8oin:AX (3.6) BS03 GDP ? GO:0005654 ... A0A8D1XNL0 37141370
    845552 8oin:AZ (3.6) BS01 rna ? GO:0005739 ... A0A4X1V2H3 37141370
    845553 8oin:Aa (3.6) BS01 rna ? GO:0003747 ... O75570 37141370
    845554 8oin:Aa (3.6) BS02 rna ? GO:0003747 ... O75570 37141370
    845555 8oin:Aa (3.6) BS03 rna ? GO:0003747 ... O75570 37141370
    845556 8oin:Aa (3.6) BS04 rna ? GO:0003747 ... O75570 37141370
    845557 8oin:Ab (3.6) BS01 rna ? GO:0003735 ... F1S001 37141370
    845558 8oin:Ab (3.6) BS02 MG ? GO:0003735 ... F1S001 37141370
    845559 8oin:Ac (3.6) BS01 rna ? GO:0005739 ... A0A4X1SZV4 37141370
    845560 8oin:Ad (3.6) BS01 rna ? GO:0003723 ... F1SU66 37141370
    845561 8oin:Ad (3.6) BS02 rna ? GO:0003723 ... F1SU66 37141370
    845562 8oin:Ag (3.6) BS01 rna ? GO:0003723 ... I3LU08 37141370
    845563 8oin:Ag (3.6) BS02 rna ? GO:0003723 ... I3LU08 37141370
    845564 8oin:Ai (3.6) BS01 rna ? GO:0003735 ... A0A286ZJJ6 37141370
    845565 8oin:Aj (3.6) BS01 rna ? GO:0003735 ... A0A287AVS9 37141370
    845566 8oin:B1 (3.6) BS01 peptide ? GO:0003735 ... A0A8D0VGD9 37141370
    845567 8oin:B1 (3.6) BS02 peptide ? GO:0003735 ... A0A8D0VGD9 37141370
    845568 8oin:BA (3.6) BS01 rna ? GO:0003735 ... A0A4X1TXR4 37141370
    845569 8oin:BB (3.6) BS01 rna ? GO:0003735 ... A0A480JJI1 37141370
    845570 8oin:BC (3.6) BS01 rna ? GO:0003723 ... F1RHJ1 37141370
    845571 8oin:BD (3.6) BS01 rna ? GO:0003735 ... A0A4X1U0F6 37141370
    845572 8oin:BE (3.6) BS01 rna ? GO:0003735 ... A0A286ZTW8 37141370
    845573 8oin:BF (3.6) BS01 rna ? GO:0003735 ... F1SGC7 37141370
    845574 8oin:BG (3.6) BS01 rna ? GO:0003735 ... A0A8D0VJF4 37141370
    845575 8oin:BH (3.6) BS01 rna ? GO:0003735 ... I3LTC4 37141370
    845576 8oin:BH (3.6) BS02 ZN ? GO:0003735 ... I3LTC4 37141370
    845577 8oin:BI (3.6) BS01 rna ? GO:0003735 ... A0A4X1TLP9 37141370
    845578 8oin:BJ (3.6) BS01 rna ? GO:0003735 ... A0A8D1JE64 37141370
    845579 8oin:BK (3.6) BS01 rna ? GO:0003735 ... A0A5G2QZK0 37141370
    845580 8oin:BL (3.6) BS01 rna ? GO:0003723 ... A0A287A143 37141370
    845581 8oin:BM (3.6) BS01 rna ? GO:0003735 ... A0A140UHW4 37141370
    845582 8oin:BN (3.6) BS01 rna ? GO:0003735 ... A0A287B9C4 37141370
    845583 8oin:BO (3.6) BS01 rna ? GO:0003735 ... I3LR45 37141370
    845584 8oin:BP (3.6) BS01 peptide ? GO:0005840 ... F1RWJ0 37141370
    845585 8oin:BP (3.6) BS02 peptide ? GO:0005840 ... F1RWJ0 37141370
    845586 8oin:BP (3.6) BS03 peptide ? GO:0005840 ... F1RWJ0 37141370
    845587 8oin:BP (3.6) BS04 peptide ? GO:0005840 ... F1RWJ0 37141370
    845588 8oin:BP (3.6) BS05 rna ? GO:0005840 ... F1RWJ0 37141370
    845589 8oin:BP (3.6) BS06 FES ? GO:0005840 ... F1RWJ0 37141370
    845590 8oin:BQ (3.6) BS01 rna ? GO:0003735 ... F1RU54 37141370
    845591 8oin:BR (3.6) BS01 rna ? GO:0003729 ... K7GP19 37141370
    845592 8oin:BS (3.6) BS01 rna ? GO:0003735 ... A0A287BMZ6 37141370
    845593 8oin:BT (3.6) BS01 rna ? GO:0003735 ... A0A8D0HMG9 37141370
    845594 8oin:BU (3.6) BS01 rna ? GO:0003735 ... F1RI89 37141370
    845595 8oin:BV (3.6) BS01 rna ? GO:0003735 ... F1RMQ4 37141370
    845596 8oin:BW (3.6) BS01 rna ? GO:0003735 ... A0A4X1VX01 37141370
    845597 8oin:BW (3.6) BS02 rna ? GO:0003735 ... A0A4X1VX01 37141370
    845598 8oin:BX (3.6) BS01 rna ? GO:0003735 ... I3LNJ0 37141370
    845599 8oin:BY (3.6) BS01 rna ? GO:0003735 ... A0A286ZU56 37141370
    845600 8oin:BZ (3.6) BS01 rna ? GO:0003723 ... F1RY70 37141370

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).