SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    845601 8oin:Ba (3.6) BS01 rna ? GO:0003735 ... F1S9B7 37141370
    845602 8oin:Bc (3.6) BS01 rna ? N/A I3LN63 37141370
    845603 8oin:Be (3.6) BS01 rna ? GO:0003735 ... A0A287BP93 37141370
    845604 8oin:Bg (3.6) BS01 rna ? GO:0005634 ... A0A286ZXA6 37141370
    845605 8oin:Bh (3.6) BS01 rna ? GO:0003735 ... F1RRH6 37141370
    845606 8oin:Bh (3.6) BS02 FES ? GO:0003735 ... F1RRH6 37141370
    845607 8oin:Bi (3.6) BS01 rna ? GO:0003735 ... A0A480QIM3 37141370
    845608 8oin:Bj (3.6) BS01 rna ? GO:0003723 ... A0A287AF82 37141370
    845609 8oin:Bl (3.6) BS01 rna ? GO:0003735 ... A0A287A731 37141370
    845610 8oin:Bl (3.6) BS02 ZN ? GO:0003735 ... A0A287A731 37141370
    845611 8oin:Bm (3.6) BS01 rna ? GO:0003735 ... A0A287BIV6 37141370
    845612 8oin:Bn (3.6) BS01 rna ? GO:0005739 ... F1RW03 37141370
    845613 8oin:Bn (3.6) BS02 rna ? GO:0005739 ... F1RW03 37141370
    845614 8oin:Bp (3.6) BS01 rna ? GO:0005739 ... A0A286ZP98 37141370
    845615 8oin:Bp (3.6) BS02 rna ? GO:0005739 ... A0A286ZP98 37141370
    845616 8oin:Bq (3.6) BS01 rna ? GO:0003735 ... A0A8D1BPA5 37141370
    845617 8oin:Bq (3.6) BS02 MG ? GO:0003735 ... A0A8D1BPA5 37141370
    845618 8oin:Br (3.6) BS01 rna ? GO:0005739 ... A0A287BQA1 37141370
    845619 8oin:Bs (3.6) BS01 rna ? GO:0003735 ... F1S8U4 37141370
    845620 8oin:Bt (3.6) BS01 rna ? GO:0003723 ... F1SR64 37141370
    845621 8oin:Bu (3.6) BS01 rna ? GO:0005739 ... I3LGM5 37141370
    845622 8oin:Bv (3.6) BS01 rna ? GO:0003735 ... F1SRT0 37141370
    845623 8oin:Bv (3.6) BS02 PHE ? GO:0003735 ... F1SRT0 37141370
    845624 8oin:Bw (3.6) BS01 rna ? GO:0005739 ... A0A480J9Z6 37141370
    845625 8oin:Bw (3.6) BS02 rna ? GO:0005739 ... A0A480J9Z6 37141370
    845626 8oin:Bx (3.6) BS01 rna ? GO:0003735 ... A0A0R4J8D6 37141370
    845627 8oin:Bz (3.6) BS01 rna ? GO:0003735 ... A0A8D1VKN8 37141370
    845628 8oio:A (1.954) BS01 peptide ? N/A Q53G59 N/A
    845629 8oio:B (1.954) BS01 peptide ? N/A Q53G59 N/A
    845630 8oio:C (1.954) BS01 peptide ? N/A Q53G59 N/A
    845631 8oio:D (1.954) BS01 peptide ? N/A Q53G59 N/A
    845632 8oip:AB (3.6) BS01 peptide ? GO:0003735 ... F1SG95 37141370
    845633 8oip:AB (3.6) BS02 rna ? GO:0003735 ... F1SG95 37141370
    845634 8oip:AC (3.6) BS01 rna ? GO:0005739 ... A0A287ANU4 37141370
    845635 8oip:AD (3.6) BS01 rna ? GO:0005634 ... A0A8D2A802 37141370
    845636 8oip:AE (3.6) BS01 rna ? GO:0003735 ... A0A4X1TSM9 37141370
    845637 8oip:AF (3.6) BS01 rna ? GO:0000028 ... A0A286ZJ25 37141370
    845638 8oip:AH (3.6) BS01 peptide ? GO:0005739 ... F1RUU2 37141370
    845639 8oip:AH (3.6) BS02 rna ? GO:0005739 ... F1RUU2 37141370
    845640 8oip:AJ (3.6) BS01 rna ? GO:0003735 ... A0A0M3KL52 37141370
    845641 8oip:AK (3.6) BS01 rna ? GO:0003735 ... A0A0M3KL53 37141370
    845642 8oip:AL (3.6) BS01 rna ? GO:0003735 ... A0A287AKS1 37141370
    845643 8oip:AM (3.6) BS01 rna ? GO:0003735 ... A0A480JTD7 37141370
    845644 8oip:AN (3.6) BS01 rna ? GO:0003735 ... A0A8D1UDM1 37141370
    845645 8oip:AO (3.6) BS01 rna ? GO:0003735 ... Q767K8 37141370
    845646 8oip:AO (3.6) BS02 ZN ? GO:0003735 ... Q767K8 37141370
    845647 8oip:AP (3.6) BS01 rna ? GO:0003735 ... A0A0M3KL54 37141370
    845648 8oip:AP (3.6) BS02 FS2 ? GO:0003735 ... A0A0M3KL54 37141370
    845649 8oip:AQ (3.6) BS01 rna ? GO:0003735 ... A0A286ZNB3 37141370
    845650 8oip:AS (3.6) BS01 rna ? GO:0003735 ... A0A287AEW3 37141370
    845651 8oip:AT (3.6) BS01 rna ? GO:0003735 ... A0A0M3KL55 37141370
    845652 8oip:AT (3.6) BS02 FS2 ? GO:0003735 ... A0A0M3KL55 37141370
    845653 8oip:AU (3.6) BS01 rna ? GO:0005763 ... A0A287AY01 37141370
    845654 8oip:AV (3.6) BS01 peptide ? GO:0005739 ... A0A5G2R1I0 37141370
    845655 8oip:AV (3.6) BS02 rna ? GO:0005739 ... A0A5G2R1I0 37141370
    845656 8oip:AX (3.6) BS01 rna ? GO:0005654 ... A0A8D1XNL0 37141370
    845657 8oip:AX (3.6) BS02 ATP ? GO:0005654 ... A0A8D1XNL0 37141370
    845658 8oip:AX (3.6) BS03 GDP ? GO:0005654 ... A0A8D1XNL0 37141370
    845659 8oip:AZ (3.6) BS01 peptide ? GO:0005739 ... A0A4X1V2H3 37141370
    845660 8oip:AZ (3.6) BS02 rna ? GO:0005739 ... A0A4X1V2H3 37141370
    845661 8oip:Aa (3.6) BS01 rna ? GO:0003747 ... O75570 37141370
    845662 8oip:Aa (3.6) BS02 rna ? GO:0003747 ... O75570 37141370
    845663 8oip:Aa (3.6) BS03 rna ? GO:0003747 ... O75570 37141370
    845664 8oip:Ab (3.6) BS01 rna ? GO:0003735 ... F1S001 37141370
    845665 8oip:Ab (3.6) BS02 MG ? GO:0003735 ... F1S001 37141370
    845666 8oip:Ac (3.6) BS01 rna ? GO:0005739 ... A0A4X1SZV4 37141370
    845667 8oip:Ad (3.6) BS01 rna ? GO:0003723 ... F1SU66 37141370
    845668 8oip:Ad (3.6) BS02 rna ? GO:0003723 ... F1SU66 37141370
    845669 8oip:Ag (3.6) BS01 rna ? GO:0003723 ... I3LU08 37141370
    845670 8oip:Ag (3.6) BS02 rna ? GO:0003723 ... I3LU08 37141370
    845671 8oip:Ai (3.6) BS01 rna ? GO:0003735 ... A0A286ZJJ6 37141370
    845672 8oip:Aj (3.6) BS01 rna ? GO:0003735 ... A0A287AVS9 37141370
    845673 8oiq:Aa (3.5) BS01 rna ? GO:0003747 ... O75570 37141370
    845674 8oiq:Aa (3.5) BS02 rna ? GO:0003747 ... O75570 37141370
    845675 8oiq:B1 (3.5) BS01 peptide ? GO:0003735 ... A0A8D0VGD9 37141370
    845676 8oiq:B1 (3.5) BS02 peptide ? GO:0003735 ... A0A8D0VGD9 37141370
    845677 8oiq:BA (3.5) BS01 rna ? GO:0003735 ... A0A4X1TXR4 37141370
    845678 8oiq:BB (3.5) BS01 rna ? GO:0003735 ... A0A480JJI1 37141370
    845679 8oiq:BC (3.5) BS01 rna ? GO:0003723 ... F1RHJ1 37141370
    845680 8oiq:BD (3.5) BS01 rna ? GO:0003735 ... A0A4X1U0F6 37141370
    845681 8oiq:BE (3.5) BS01 rna ? GO:0003735 ... A0A286ZTW8 37141370
    845682 8oiq:BF (3.5) BS01 rna ? GO:0003735 ... F1SGC7 37141370
    845683 8oiq:BG (3.5) BS01 rna ? GO:0003735 ... A0A8D0VJF4 37141370
    845684 8oiq:BH (3.5) BS01 rna ? GO:0003735 ... I3LTC4 37141370
    845685 8oiq:BH (3.5) BS02 ZN ? GO:0003735 ... I3LTC4 37141370
    845686 8oiq:BI (3.5) BS01 rna ? GO:0003735 ... A0A4X1TLP9 37141370
    845687 8oiq:BJ (3.5) BS01 rna ? GO:0003735 ... A0A8D1JE64 37141370
    845688 8oiq:BK (3.5) BS01 rna ? GO:0003735 ... A0A5G2QZK0 37141370
    845689 8oiq:BL (3.5) BS01 rna ? GO:0003723 ... A0A287A143 37141370
    845690 8oiq:BM (3.5) BS01 rna ? GO:0003735 ... A0A140UHW4 37141370
    845691 8oiq:BN (3.5) BS01 rna ? GO:0003735 ... A0A287B9C4 37141370
    845692 8oiq:BO (3.5) BS01 rna ? GO:0003735 ... I3LR45 37141370
    845693 8oiq:BP (3.5) BS01 peptide ? GO:0005840 ... F1RWJ0 37141370
    845694 8oiq:BP (3.5) BS02 peptide ? GO:0005840 ... F1RWJ0 37141370
    845695 8oiq:BP (3.5) BS03 peptide ? GO:0005840 ... F1RWJ0 37141370
    845696 8oiq:BP (3.5) BS04 peptide ? GO:0005840 ... F1RWJ0 37141370
    845697 8oiq:BP (3.5) BS05 rna ? GO:0005840 ... F1RWJ0 37141370
    845698 8oiq:BP (3.5) BS06 FES ? GO:0005840 ... F1RWJ0 37141370
    845699 8oiq:BQ (3.5) BS01 rna ? GO:0003735 ... F1RU54 37141370
    845700 8oiq:BR (3.5) BS01 rna ? GO:0003729 ... K7GP19 37141370
    845701 8oiq:BS (3.5) BS01 rna ? GO:0003735 ... A0A287BMZ6 37141370
    845702 8oiq:BT (3.5) BS01 rna ? GO:0003735 ... A0A8D0HMG9 37141370
    845703 8oiq:BU (3.5) BS01 rna ? GO:0003735 ... F1RI89 37141370
    845704 8oiq:BV (3.5) BS01 rna ? GO:0003735 ... F1RMQ4 37141370
    845705 8oiq:BW (3.5) BS01 rna ? GO:0003735 ... A0A4X1VX01 37141370
    845706 8oiq:BW (3.5) BS02 rna ? GO:0003735 ... A0A4X1VX01 37141370
    845707 8oiq:BX (3.5) BS01 rna ? GO:0003735 ... I3LNJ0 37141370
    845708 8oiq:BY (3.5) BS01 rna ? GO:0003735 ... A0A286ZU56 37141370
    845709 8oiq:BZ (3.5) BS01 rna ? GO:0003723 ... F1RY70 37141370
    845710 8oiq:Ba (3.5) BS01 rna ? GO:0003735 ... F1S9B7 37141370
    845711 8oiq:Bc (3.5) BS01 rna ? N/A I3LN63 37141370
    845712 8oiq:Bd (3.5) BS01 rna ? GO:0003735 ... A0A4X1ULI6 37141370
    845713 8oiq:Be (3.5) BS01 rna ? GO:0003735 ... A0A287BP93 37141370
    845714 8oiq:Bg (3.5) BS01 rna ? GO:0005634 ... A0A286ZXA6 37141370
    845715 8oiq:Bh (3.5) BS01 rna ? GO:0003735 ... F1RRH6 37141370
    845716 8oiq:Bh (3.5) BS02 FES ? GO:0003735 ... F1RRH6 37141370
    845717 8oiq:Bi (3.5) BS01 rna ? GO:0003735 ... A0A480QIM3 37141370
    845718 8oiq:Bj (3.5) BS01 rna ? GO:0003723 ... A0A287AF82 37141370
    845719 8oiq:Bl (3.5) BS01 rna ? GO:0003735 ... A0A287A731 37141370
    845720 8oiq:Bl (3.5) BS02 ZN ? GO:0003735 ... A0A287A731 37141370
    845721 8oiq:Bm (3.5) BS01 rna ? GO:0003735 ... A0A287BIV6 37141370
    845722 8oiq:Bn (3.5) BS01 rna ? GO:0005739 ... F1RW03 37141370
    845723 8oiq:Bn (3.5) BS02 rna ? GO:0005739 ... F1RW03 37141370
    845724 8oiq:Bp (3.5) BS01 rna ? GO:0005739 ... A0A286ZP98 37141370
    845725 8oiq:Bp (3.5) BS02 rna ? GO:0005739 ... A0A286ZP98 37141370
    845726 8oiq:Bq (3.5) BS01 rna ? GO:0003735 ... A0A8D1BPA5 37141370
    845727 8oiq:Bq (3.5) BS02 MG ? GO:0003735 ... A0A8D1BPA5 37141370
    845728 8oiq:Br (3.5) BS01 rna ? GO:0005739 ... A0A287BQA1 37141370
    845729 8oiq:Bs (3.5) BS01 rna ? GO:0003735 ... F1S8U4 37141370
    845730 8oiq:Bt (3.5) BS01 rna ? GO:0003723 ... F1SR64 37141370
    845731 8oiq:Bu (3.5) BS01 rna ? GO:0005739 ... I3LGM5 37141370
    845732 8oiq:Bv (3.5) BS01 rna ? GO:0003735 ... F1SRT0 37141370
    845733 8oiq:Bv (3.5) BS02 PHE ? GO:0003735 ... F1SRT0 37141370
    845734 8oiq:Bw (3.5) BS01 rna ? GO:0005739 ... A0A480J9Z6 37141370
    845735 8oiq:Bw (3.5) BS02 rna ? GO:0005739 ... A0A480J9Z6 37141370
    845736 8oiq:Bx (3.5) BS01 rna ? GO:0003735 ... A0A287A0K2 37141370
    845737 8oiq:Bz (3.5) BS01 rna ? GO:0003735 ... A0A8D1VKN8 37141370
    845738 8oir:AC (3.1) BS01 rna ? GO:0003723 ... Q96EL2 37141370
    845739 8oir:AD (3.1) BS01 rna ? GO:0005515 ... Q9NWT8 37141370
    845740 8oir:AD (3.1) BS02 rna ? GO:0005515 ... Q9NWT8 37141370
    845741 8oir:AE (3.1) BS01 rna ? GO:0003735 ... P82932 37141370
    845742 8oir:AF (3.1) BS01 rna ? GO:0000028 ... Q9Y2R9 37141370
    845743 8oir:AH (3.1) BS01 rna ? GO:0005739 ... P82664 37141370
    845744 8oir:AJ (3.1) BS01 rna ? GO:0003723 ... O15235 37141370
    845745 8oir:AK (3.1) BS01 rna ? GO:0003723 ... O60783 37141370
    845746 8oir:AL (3.1) BS01 rna ? GO:0003723 ... P82914 37141370
    845747 8oir:AM (3.1) BS01 rna ? GO:0003735 ... Q9Y3D3 37141370
    845748 8oir:AN (3.1) BS01 rna ? GO:0003735 ... Q9Y2R5 37141370
    845749 8oir:AO (3.1) BS01 rna ? GO:0003735 ... Q9Y676 37141370
    845750 8oir:AO (3.1) BS02 ZN ? GO:0003735 ... Q9Y676 37141370
    845751 8oir:AP (3.1) BS01 rna ? GO:0003735 ... Q9Y3D5 37141370
    845752 8oir:AP (3.1) BS02 FS2 ? GO:0003735 ... Q9Y3D5 37141370
    845753 8oir:AQ (3.1) BS01 rna ? GO:0003723 ... P82921 37141370
    845754 8oir:AS (3.1) BS01 rna ? GO:0003723 ... Q9Y3D9 37141370
    845755 8oir:AT (3.1) BS01 rna ? GO:0003735 ... P82663 37141370
    845756 8oir:AT (3.1) BS02 FS2 ? GO:0003735 ... P82663 37141370
    845757 8oir:AU (3.1) BS01 rna ? GO:0003723 ... Q9BYN8 37141370
    845758 8oir:AV (3.1) BS01 rna ? GO:0000049 ... Q92552 37141370
    845759 8oir:AX (3.1) BS01 rna ? GO:0003723 ... P51398 37141370
    845760 8oir:AX (3.1) BS02 ATP ? GO:0003723 ... P51398 37141370
    845761 8oir:AX (3.1) BS03 GDP ? GO:0003723 ... P51398 37141370
    845762 8oir:AZ (3.1) BS01 rna ? GO:0003735 ... Q9Y291 37141370
    845763 8oir:Aa (3.1) BS01 rna ? GO:0003747 ... O75570 37141370
    845764 8oir:Aa (3.1) BS02 rna ? GO:0003747 ... O75570 37141370
    845765 8oir:Aa (3.1) BS03 rna ? GO:0003747 ... O75570 37141370
    845766 8oir:Aa (3.1) BS04 rna ? GO:0003747 ... O75570 37141370
    845767 8oir:Ab (3.1) BS01 rna ? GO:0003735 ... Q9Y399 37141370
    845768 8oir:Ab (3.1) BS02 MG ? GO:0003735 ... Q9Y399 37141370
    845769 8oir:Ac (3.1) BS01 rna ? GO:0001650 ... Q96BP2 37141370
    845770 8oir:Ad (3.1) BS01 rna ? GO:0003723 ... P82675 37141370
    845771 8oir:Ad (3.1) BS02 rna ? GO:0003723 ... P82675 37141370
    845772 8oir:Ad (3.1) BS03 MG ? GO:0003723 ... P82675 37141370
    845773 8oir:Ae (3.1) BS01 rna ? GO:0003723 ... Q96EY7 37141370
    845774 8oir:Ag (3.1) BS01 rna ? GO:0003723 ... P82933 37141370
    845775 8oir:Ai (3.1) BS01 rna ? GO:0003723 ... P82912 37141370
    845776 8oir:Aj (3.1) BS01 rna ? GO:0003735 ... P82930 37141370
    845777 8oir:BA (3.1) BS01 rna ? GO:0003723 ... Q9NWU5 37141370
    845778 8oir:BB (3.1) BS01 rna ? GO:0001650 ... Q16540 37141370
    845779 8oir:BC (3.1) BS01 rna ? GO:0003723 ... Q96A35 37141370
    845780 8oir:BD (3.1) BS01 rna ? GO:0003723 ... Q9P0M9 37141370
    845781 8oir:BE (3.1) BS01 rna ? GO:0003723 ... Q13084 37141370
    845782 8oir:BF (3.1) BS01 rna ? GO:0003735 ... Q9HD33 37141370
    845783 8oir:BG (3.1) BS01 rna ? GO:0003735 ... Q8TCC3 37141370
    845784 8oir:BH (3.1) BS01 rna ? GO:0003723 ... Q9BYC8 37141370
    845785 8oir:BH (3.1) BS02 ZN ? GO:0003723 ... Q9BYC8 37141370
    845786 8oir:BI (3.1) BS01 rna ? GO:0003735 ... O75394 37141370
    845787 8oir:BJ (3.1) BS01 rna ? GO:0003735 ... Q9BQ48 37141370
    845788 8oir:BK (3.1) BS01 rna ? GO:0003735 ... Q9NZE8 37141370
    845789 8oir:BL (3.1) BS01 rna ? GO:0003723 ... Q5T653 37141370
    845790 8oir:BM (3.1) BS01 rna ? GO:0003723 ... P09001 37141370
    845791 8oir:BN (3.1) BS01 rna ? GO:0003723 ... Q9BYD3 37141370
    845792 8oir:BO (3.1) BS01 rna ? GO:0003723 ... Q9BYD2 37141370
    845793 8oir:BP (3.1) BS01 rna ? GO:0003723 ... Q7Z7H8 37141370
    845794 8oir:BQ (3.1) BS01 rna ? GO:0003723 ... Q9Y3B7 37141370
    845795 8oir:BR (3.1) BS01 rna ? GO:0003723 ... Q9BYD1 37141370
    845796 8oir:BS (3.1) BS01 rna ? GO:0003723 ... Q6P1L8 37141370
    845797 8oir:BT (3.1) BS01 rna ? GO:0003723 ... Q9P015 37141370
    845798 8oir:BU (3.1) BS01 rna ? GO:0003735 ... Q9NX20 37141370
    845799 8oir:BV (3.1) BS01 rna ? GO:0003735 ... Q9NRX2 37141370
    845800 8oir:BW (3.1) BS01 rna ? GO:0003723 ... Q9H0U6 37141370

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).