SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4220 4221 4222 4223 4224 4225 4226 4227 4228 4229 4230 4231 4232 4233 4234 4235 4236 4237 4238 4239 4240 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    845801 8oir:BW (3.1) BS02 rna ? GO:0003723 ... Q9H0U6 37141370
    845802 8oir:BX (3.1) BS01 rna ? GO:0003735 ... P49406 37141370
    845803 8oir:BY (3.1) BS01 rna ? GO:0003723 ... Q9BYC9 37141370
    845804 8oir:BZ (3.1) BS01 rna ? GO:0003723 ... Q7Z2W9 37141370
    845805 8oir:Ba (3.1) BS01 rna ? GO:0003735 ... Q86TS9 37141370
    845806 8oir:Bb (3.1) BS01 rna ? GO:0005515 ... Q96EL3 37141370
    845807 8oir:Bc (3.1) BS01 rna ? GO:0003723 ... Q6P161 37141370
    845808 8oir:Be (3.1) BS01 rna ? GO:0003735 ... Q9BQC6 37141370
    845809 8oir:Bg (3.1) BS01 rna ? GO:0005515 ... Q8TAE8 37141370
    845810 8oir:Bh (3.1) BS01 rna ? GO:0003735 ... Q9NVS2 37141370
    845811 8oir:Bh (3.1) BS02 FS2 ? GO:0003735 ... Q9NVS2 37141370
    845812 8oir:Bi (3.1) BS01 rna ? GO:0003723 ... Q9NP92 37141370
    845813 8oir:Bj (3.1) BS01 rna ? GO:0003723 ... Q9BYD6 37141370
    845814 8oir:Bl (3.1) BS01 rna ? GO:0003735 ... Q9P0J6 37141370
    845815 8oir:Bl (3.1) BS02 ZN ? GO:0003735 ... Q9P0J6 37141370
    845816 8oir:Bm (3.1) BS01 rna ? GO:0003723 ... Q9BZE1 37141370
    845817 8oir:Bn (3.1) BS01 rna ? GO:0005515 ... Q96DV4 37141370
    845818 8oir:Bn (3.1) BS02 rna ? GO:0005515 ... Q96DV4 37141370
    845819 8oir:Bp (3.1) BS01 rna ? GO:0003723 ... Q9NQ50 37141370
    845820 8oir:Bp (3.1) BS02 rna ? GO:0003723 ... Q9NQ50 37141370
    845821 8oir:Bq (3.1) BS01 rna ? GO:0003723 ... Q8IXM3 37141370
    845822 8oir:Br (3.1) BS01 rna ? GO:0003723 ... Q9Y6G3 37141370
    845823 8oir:Bs (3.1) BS01 rna ? GO:0003723 ... Q8N983 37141370
    845824 8oir:Bt (3.1) BS01 rna 3.1.26.- GO:0003723 ... Q9H9J2 37141370
    845825 8oir:Bu (3.1) BS01 rna ? GO:0003723 ... Q9BRJ2 37141370
    845826 8oir:Bv (3.1) BS01 rna ? GO:0003735 ... Q9H2W6 37141370
    845827 8oir:Bv (3.1) BS02 VAL ? GO:0003735 ... Q9H2W6 37141370
    845828 8oir:Bw (3.1) BS01 rna ? GO:0005515 ... Q96GC5 37141370
    845829 8oir:Bw (3.1) BS02 rna ? GO:0005515 ... Q96GC5 37141370
    845830 8oir:Bx (3.1) BS01 rna ? GO:0003735 ... Q13405 37141370
    845831 8oir:Bz (3.1) BS01 rna ? GO:0003735 ... Q4U2R6 37141370
    845832 8ois:AB (3.0) BS01 peptide ? GO:0003723 ... P82673 37141370
    845833 8ois:AC (3.0) BS01 rna ? GO:0003723 ... Q96EL2 37141370
    845834 8ois:AD (3.0) BS01 rna ? GO:0005515 ... Q9NWT8 37141370
    845835 8ois:AE (3.0) BS01 rna ? GO:0003735 ... P82932 37141370
    845836 8ois:AF (3.0) BS01 rna ? GO:0000028 ... Q9Y2R9 37141370
    845837 8ois:AH (3.0) BS01 peptide ? GO:0005739 ... P82664 37141370
    845838 8ois:AH (3.0) BS02 rna ? GO:0005739 ... P82664 37141370
    845839 8ois:AJ (3.0) BS01 rna ? GO:0003723 ... O15235 37141370
    845840 8ois:AK (3.0) BS01 rna ? GO:0003723 ... O60783 37141370
    845841 8ois:AL (3.0) BS01 rna ? GO:0003723 ... P82914 37141370
    845842 8ois:AM (3.0) BS01 rna ? GO:0003735 ... Q9Y3D3 37141370
    845843 8ois:AM (3.0) BS02 FS2 ? GO:0003735 ... Q9Y3D3 37141370
    845844 8ois:AN (3.0) BS01 rna ? GO:0003735 ... Q9Y2R5 37141370
    845845 8ois:AO (3.0) BS01 rna ? GO:0003735 ... Q9Y676 37141370
    845846 8ois:AO (3.0) BS02 ZN ? GO:0003735 ... Q9Y676 37141370
    845847 8ois:AP (3.0) BS01 rna ? GO:0003735 ... Q9Y3D5 37141370
    845848 8ois:AP (3.0) BS02 FS2 ? GO:0003735 ... Q9Y3D5 37141370
    845849 8ois:AQ (3.0) BS01 rna ? GO:0003723 ... P82921 37141370
    845850 8ois:AS (3.0) BS01 rna ? GO:0003723 ... Q9Y3D9 37141370
    845851 8ois:AT (3.0) BS01 rna ? GO:0003735 ... P82663 37141370
    845852 8ois:AT (3.0) BS02 FS2 ? GO:0003735 ... P82663 37141370
    845853 8ois:AU (3.0) BS01 rna ? GO:0003723 ... Q9BYN8 37141370
    845854 8ois:AV (3.0) BS01 peptide ? GO:0000049 ... Q92552 37141370
    845855 8ois:AV (3.0) BS02 rna ? GO:0000049 ... Q92552 37141370
    845856 8ois:AX (3.0) BS01 rna ? GO:0003723 ... P51398 37141370
    845857 8ois:AX (3.0) BS02 ATP ? GO:0003723 ... P51398 37141370
    845858 8ois:AX (3.0) BS03 GDP ? GO:0003723 ... P51398 37141370
    845859 8ois:AY (3.0) BS01 peptide ? GO:0003723 ... Q92665 37141370
    845860 8ois:AZ (3.0) BS01 peptide ? GO:0003735 ... Q9Y291 37141370
    845861 8ois:AZ (3.0) BS02 rna ? GO:0003735 ... Q9Y291 37141370
    845862 8ois:Aa (3.0) BS01 rna ? GO:0003747 ... O75570 37141370
    845863 8ois:Aa (3.0) BS02 rna ? GO:0003747 ... O75570 37141370
    845864 8ois:Aa (3.0) BS03 rna ? GO:0003747 ... O75570 37141370
    845865 8ois:Ab (3.0) BS01 rna ? GO:0003735 ... Q9Y399 37141370
    845866 8ois:Ab (3.0) BS02 MG ? GO:0003735 ... Q9Y399 37141370
    845867 8ois:Ac (3.0) BS01 rna ? GO:0001650 ... Q96BP2 37141370
    845868 8ois:Ad (3.0) BS01 rna ? GO:0003723 ... P82675 37141370
    845869 8ois:Ad (3.0) BS02 MG ? GO:0003723 ... P82675 37141370
    845870 8ois:Ae (3.0) BS01 rna ? GO:0003723 ... Q96EY7 37141370
    845871 8ois:Ag (3.0) BS01 rna ? GO:0003723 ... P82933 37141370
    845872 8ois:Ai (3.0) BS01 rna ? GO:0003723 ... P82912 37141370
    845873 8ois:Aj (3.0) BS01 rna ? GO:0003735 ... P82930 37141370
    845874 8oit:Aa (2.9) BS01 rna ? GO:0003747 ... O75570 37141370
    845875 8oit:Aa (2.9) BS02 rna ? GO:0003747 ... O75570 37141370
    845876 8oit:BA (2.9) BS01 rna ? GO:0003723 ... Q9NWU5 37141370
    845877 8oit:BB (2.9) BS01 rna ? GO:0001650 ... Q16540 37141370
    845878 8oit:BC (2.9) BS01 rna ? GO:0003723 ... Q96A35 37141370
    845879 8oit:BD (2.9) BS01 rna ? GO:0003723 ... Q9P0M9 37141370
    845880 8oit:BE (2.9) BS01 rna ? GO:0003723 ... Q13084 37141370
    845881 8oit:BF (2.9) BS01 rna ? GO:0003735 ... Q9HD33 37141370
    845882 8oit:BG (2.9) BS01 rna ? GO:0003735 ... Q8TCC3 37141370
    845883 8oit:BH (2.9) BS01 rna ? GO:0003723 ... Q9BYC8 37141370
    845884 8oit:BH (2.9) BS02 ZN ? GO:0003723 ... Q9BYC8 37141370
    845885 8oit:BI (2.9) BS01 rna ? GO:0003735 ... O75394 37141370
    845886 8oit:BJ (2.9) BS01 rna ? GO:0003735 ... Q9BQ48 37141370
    845887 8oit:BK (2.9) BS01 rna ? GO:0003735 ... Q9NZE8 37141370
    845888 8oit:BL (2.9) BS01 rna ? GO:0003723 ... Q5T653 37141370
    845889 8oit:BM (2.9) BS01 rna ? GO:0003723 ... P09001 37141370
    845890 8oit:BN (2.9) BS01 rna ? GO:0003723 ... Q9BYD3 37141370
    845891 8oit:BO (2.9) BS01 rna ? GO:0003723 ... Q9BYD2 37141370
    845892 8oit:BP (2.9) BS01 rna ? GO:0003723 ... Q7Z7H8 37141370
    845893 8oit:BQ (2.9) BS01 rna ? GO:0003723 ... Q9Y3B7 37141370
    845894 8oit:BR (2.9) BS01 rna ? GO:0003723 ... Q9BYD1 37141370
    845895 8oit:BS (2.9) BS01 rna ? GO:0003723 ... Q6P1L8 37141370
    845896 8oit:BT (2.9) BS01 rna ? GO:0003723 ... Q9P015 37141370
    845897 8oit:BU (2.9) BS01 rna ? GO:0003735 ... Q9NX20 37141370
    845898 8oit:BV (2.9) BS01 rna ? GO:0003735 ... Q9NRX2 37141370
    845899 8oit:BW (2.9) BS01 rna ? GO:0003723 ... Q9H0U6 37141370
    845900 8oit:BW (2.9) BS02 rna ? GO:0003723 ... Q9H0U6 37141370
    845901 8oit:BX (2.9) BS01 rna ? GO:0003735 ... P49406 37141370
    845902 8oit:BY (2.9) BS01 rna ? GO:0003723 ... Q9BYC9 37141370
    845903 8oit:BZ (2.9) BS01 rna ? GO:0003723 ... Q7Z2W9 37141370
    845904 8oit:Ba (2.9) BS01 rna ? GO:0003735 ... Q86TS9 37141370
    845905 8oit:Bb (2.9) BS01 rna ? GO:0005515 ... Q96EL3 37141370
    845906 8oit:Bc (2.9) BS01 rna ? GO:0003723 ... Q6P161 37141370
    845907 8oit:Be (2.9) BS01 rna ? GO:0003735 ... Q9BQC6 37141370
    845908 8oit:Bg (2.9) BS01 rna ? GO:0005515 ... Q8TAE8 37141370
    845909 8oit:Bh (2.9) BS01 rna ? GO:0003735 ... Q9NVS2 37141370
    845910 8oit:Bh (2.9) BS02 FS2 ? GO:0003735 ... Q9NVS2 37141370
    845911 8oit:Bi (2.9) BS01 rna ? GO:0003723 ... Q9NP92 37141370
    845912 8oit:Bj (2.9) BS01 rna ? GO:0003723 ... Q9BYD6 37141370
    845913 8oit:Bl (2.9) BS01 rna ? GO:0003735 ... Q9P0J6 37141370
    845914 8oit:Bl (2.9) BS02 ZN ? GO:0003735 ... Q9P0J6 37141370
    845915 8oit:Bm (2.9) BS01 rna ? GO:0003723 ... Q9BZE1 37141370
    845916 8oit:Bn (2.9) BS01 rna ? GO:0005515 ... Q96DV4 37141370
    845917 8oit:Bn (2.9) BS02 rna ? GO:0005515 ... Q96DV4 37141370
    845918 8oit:Bp (2.9) BS01 rna ? GO:0003723 ... Q9NQ50 37141370
    845919 8oit:Bp (2.9) BS02 rna ? GO:0003723 ... Q9NQ50 37141370
    845920 8oit:Bq (2.9) BS01 rna ? GO:0003723 ... Q8IXM3 37141370
    845921 8oit:Br (2.9) BS01 rna ? GO:0003723 ... Q9Y6G3 37141370
    845922 8oit:Bs (2.9) BS01 rna ? GO:0003723 ... Q8N983 37141370
    845923 8oit:Bt (2.9) BS01 rna 3.1.26.- GO:0003723 ... Q9H9J2 37141370
    845924 8oit:Bu (2.9) BS01 rna ? GO:0003723 ... Q9BRJ2 37141370
    845925 8oit:Bv (2.9) BS01 rna ? GO:0003735 ... Q9H2W6 37141370
    845926 8oit:Bv (2.9) BS02 VAL ? GO:0003735 ... Q9H2W6 37141370
    845927 8oit:Bw (2.9) BS01 rna ? GO:0005515 ... Q96GC5 37141370
    845928 8oit:Bw (2.9) BS02 rna ? GO:0005515 ... Q96GC5 37141370
    845929 8oit:Bx (2.9) BS01 rna ? GO:0003735 ... Q13405 37141370
    845930 8oit:Bz (2.9) BS01 rna ? GO:0003735 ... Q4U2R6 37141370
    845931 8oiv:A (2.12) BS01 rna 2.1.1.57 GO:0003746 ... A0A7H0DN74 37421984
    845932 8oiv:A (2.12) BS02 SAH 2.1.1.57 GO:0003746 ... A0A7H0DN74 37421984
    845933 8oiv:B (2.12) BS01 GTG 2.1.1.57 GO:0003746 ... A0A7H0DN74 37421984
    845934 8oiv:B (2.12) BS02 SAH 2.1.1.57 GO:0003746 ... A0A7H0DN74 37421984
    845935 8oiw:AAA (1.89) BS01 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845936 8oiw:AAA (1.89) BS02 OXY 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845937 8oiw:AAA (1.89) BS03 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845938 8oiw:BBB (1.89) BS01 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845939 8oiw:BBB (1.89) BS02 OXY 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845940 8oiw:BBB (1.89) BS03 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845941 8oiw:CCC (1.89) BS01 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845942 8oiw:CCC (1.89) BS02 OXY 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845943 8oiw:CCC (1.89) BS03 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845944 8oiw:DDD (1.89) BS01 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845945 8oiw:DDD (1.89) BS02 OXY 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845946 8oiw:DDD (1.89) BS03 AZA 1.7.3.3 GO:0005777 ... A0A8V0ZED1 37695804
    845947 8oix:H (2.89) BS01 SA1 3.4.25.1 GO:0000502 ... A2E7Z2 39366995
    845948 8oix:I (2.89) BS01 SA1 3.4.25.1 GO:0004298 ... A2F2T6 39366995
    845949 8oix:V (2.89) BS01 SA1 3.4.25.1 GO:0000502 ... A2E7Z2 39366995
    845950 8oix:W (2.89) BS01 SA1 3.4.25.1 GO:0004298 ... A2F2T6 39366995
    845951 8oiz:B (2.5) BS01 ZN ? GO:0005515 ... Q96SW2 37418539
    845952 8oiz:B (2.5) BS02 Y70 ? GO:0005515 ... Q96SW2 37418539
    845953 8oj0:1 (3.3) BS01 peptide ? GO:0005048 ... P61619 38383785
    845954 8oj0:1 (3.3) BS02 rna ? GO:0005048 ... P61619 38383785
    845955 8oj0:2 (3.3) BS01 peptide ? GO:0005515 ... P60059 38383785
    845956 8oj0:A (3.3) BS01 rna 2.3.2.- GO:0000077 ... O94874 38383785
    845957 8oj0:B (3.3) BS01 rna ? GO:0000079 ... Q96JB5 38383785
    845958 8oj0:K (3.3) BS01 rna ? GO:0000054 ... P56537 38383785
    845959 8oj0:LA (3.3) BS01 rna ? GO:0002181 ... P62917 38383785
    845960 8oj0:LB (3.3) BS01 rna ? GO:0002181 ... P39023 38383785
    845961 8oj0:LC (3.3) BS01 rna ? GO:0002181 ... P36578 38383785
    845962 8oj0:LC (3.3) BS02 rna ? GO:0002181 ... P36578 38383785
    845963 8oj0:LD (3.3) BS01 rna ? GO:0000027 ... P46777 38383785
    845964 8oj0:LD (3.3) BS02 rna ? GO:0000027 ... P46777 38383785
    845965 8oj0:LE (3.3) BS01 rna ? GO:0002181 ... Q02878 38383785
    845966 8oj0:LF (3.3) BS01 rna ? GO:0000463 ... P18124 38383785
    845967 8oj0:LF (3.3) BS02 rna ? GO:0000463 ... P18124 38383785
    845968 8oj0:LG (3.3) BS01 rna ? GO:0000470 ... P62424 38383785
    845969 8oj0:LG (3.3) BS02 rna ? GO:0000470 ... P62424 38383785
    845970 8oj0:LH (3.3) BS01 rna ? GO:0002181 ... P32969 38383785
    845971 8oj0:LI (3.3) BS01 rna ? GO:0000027 ... Q96L21 38383785
    845972 8oj0:LI (3.3) BS02 rna ? GO:0000027 ... Q96L21 38383785
    845973 8oj0:LJ (3.3) BS01 rna ? GO:0000027 ... P62913 38383785
    845974 8oj0:LJ (3.3) BS02 rna ? GO:0000027 ... P62913 38383785
    845975 8oj0:LL (3.3) BS01 rna ? GO:0001824 ... P26373 38383785
    845976 8oj0:LL (3.3) BS02 rna ? GO:0001824 ... P26373 38383785
    845977 8oj0:LM (3.3) BS01 rna ? GO:0002181 ... P50914 38383785
    845978 8oj0:LN (3.3) BS01 rna ? GO:0002181 ... P61313 38383785
    845979 8oj0:LN (3.3) BS02 rna ? GO:0002181 ... P61313 38383785
    845980 8oj0:LO (3.3) BS01 rna ? GO:0002181 ... P40429 38383785
    845981 8oj0:LP (3.3) BS01 rna ? GO:0002181 ... P18621 38383785
    845982 8oj0:LP (3.3) BS02 rna ? GO:0002181 ... P18621 38383785
    845983 8oj0:LQ (3.3) BS01 rna ? GO:0002181 ... Q07020 38383785
    845984 8oj0:LR (3.3) BS01 rna ? GO:0002181 ... P84098 38383785
    845985 8oj0:LS (3.3) BS01 rna ? GO:0002181 ... Q02543 38383785
    845986 8oj0:LS (3.3) BS02 rna ? GO:0002181 ... Q02543 38383785
    845987 8oj0:LT (3.3) BS01 rna ? GO:0002181 ... P46778 38383785
    845988 8oj0:LT (3.3) BS02 rna ? GO:0002181 ... P46778 38383785
    845989 8oj0:LU (3.3) BS01 rna ? GO:0002181 ... P35268 38383785
    845990 8oj0:LV (3.3) BS01 rna ? GO:0000122 ... P62829 38383785
    845991 8oj0:LW (3.3) BS01 rna ? GO:0000027 ... P83731 38383785
    845992 8oj0:LX (3.3) BS01 rna ? GO:0002181 ... P62750 38383785
    845993 8oj0:LX (3.3) BS02 rna ? GO:0002181 ... P62750 38383785
    845994 8oj0:LY (3.3) BS01 rna ? GO:0002181 ... P61254 38383785
    845995 8oj0:LY (3.3) BS02 rna ? GO:0002181 ... P61254 38383785
    845996 8oj0:LZ (3.3) BS01 rna ? GO:0002181 ... P61353 38383785
    845997 8oj0:La (3.3) BS01 rna ? GO:0002181 ... P46776 38383785
    845998 8oj0:Lb (3.3) BS01 rna ? GO:0002181 ... P47914 38383785
    845999 8oj0:Lc (3.3) BS01 rna ? GO:0002181 ... P62888 38383785
    846000 8oj0:Ld (3.3) BS01 rna ? GO:0002181 ... P62899 38383785

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).