SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    847201 8ooj:B (2.1) BS02 VVC 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 38064712
    847202 8ooj:C (2.1) BS01 UDP 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 38064712
    847203 8ooj:C (2.1) BS02 VVC 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 38064712
    847204 8ooj:D (2.1) BS01 UDP 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 38064712
    847205 8ooj:D (2.1) BS02 VVC 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 38064712
    847206 8oom:A (1.82) BS01 PNY ? GO:0004060 ... Q84G21 N/A
    847207 8ooo:A (2.149) BS01 ATP N/A GO:0003824 ... N/A 38243071
    847208 8ooo:A (2.149) BS02 AKG N/A GO:0003824 ... N/A 38243071
    847209 8ooo:A (2.149) BS03 AKG N/A GO:0003824 ... N/A 38243071
    847210 8ooo:B (2.149) BS01 ATP N/A GO:0003824 ... N/A 38243071
    847211 8ooo:B (2.149) BS02 AKG N/A GO:0003824 ... N/A 38243071
    847212 8ooo:B (2.149) BS03 AKG N/A GO:0003824 ... N/A 38243071
    847213 8ooo:C (2.149) BS01 ATP N/A GO:0003824 ... N/A 38243071
    847214 8ooo:C (2.149) BS02 AKG N/A GO:0003824 ... N/A 38243071
    847215 8ooo:C (2.149) BS03 AKG N/A GO:0003824 ... N/A 38243071
    847216 8ooo:D (2.149) BS01 ATP N/A GO:0003824 ... N/A 38243071
    847217 8ooo:D (2.149) BS02 AKG N/A GO:0003824 ... N/A 38243071
    847218 8ooo:D (2.149) BS03 AKG N/A GO:0003824 ... N/A 38243071
    847219 8ooo:E (2.149) BS01 AKG N/A GO:0003824 ... N/A 38243071
    847220 8ooo:E (2.149) BS02 ATP N/A GO:0003824 ... N/A 38243071
    847221 8ooo:E (2.149) BS03 AKG N/A GO:0003824 ... N/A 38243071
    847222 8ooo:F (2.149) BS01 AKG N/A GO:0003824 ... N/A 38243071
    847223 8ooo:F (2.149) BS02 AKG N/A GO:0003824 ... N/A 38243071
    847224 8ooo:F (2.149) BS03 ATP N/A GO:0003824 ... N/A 38243071
    847225 8ooo:G (2.149) BS01 AKG N/A GO:0003824 ... N/A 38243071
    847226 8ooo:G (2.149) BS02 ATP N/A GO:0003824 ... N/A 38243071
    847227 8ooo:G (2.149) BS03 AKG N/A GO:0003824 ... N/A 38243071
    847228 8ooo:H (2.149) BS01 AKG N/A GO:0003824 ... N/A 38243071
    847229 8ooo:H (2.149) BS02 AKG N/A GO:0003824 ... N/A 38243071
    847230 8ooo:H (2.149) BS03 ATP N/A GO:0003824 ... N/A 38243071
    847231 8ooo:I (2.149) BS01 AKG N/A GO:0003824 ... N/A 38243071
    847232 8ooo:I (2.149) BS02 ATP N/A GO:0003824 ... N/A 38243071
    847233 8ooo:I (2.149) BS03 AKG N/A GO:0003824 ... N/A 38243071
    847234 8ooo:J (2.149) BS01 AKG N/A GO:0003824 ... N/A 38243071
    847235 8ooo:J (2.149) BS02 AKG N/A GO:0003824 ... N/A 38243071
    847236 8ooo:J (2.149) BS03 ATP N/A GO:0003824 ... N/A 38243071
    847237 8ooo:K (2.149) BS01 AKG N/A GO:0003824 ... N/A 38243071
    847238 8ooo:K (2.149) BS02 ATP N/A GO:0003824 ... N/A 38243071
    847239 8ooo:K (2.149) BS03 AKG N/A GO:0003824 ... N/A 38243071
    847240 8ooo:L (2.149) BS01 AKG N/A GO:0003824 ... N/A 38243071
    847241 8ooo:L (2.149) BS02 AKG N/A GO:0003824 ... N/A 38243071
    847242 8ooo:L (2.149) BS03 ATP N/A GO:0003824 ... N/A 38243071
    847243 8oop:A (2.7) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYI5 37384673
    847244 8oop:B (2.7) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYI5 37384673
    847245 8oop:C (2.7) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYI5 37384673
    847246 8oop:D (2.7) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYC2 37384673
    847247 8oop:E (2.7) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYC2 37384673
    847248 8oop:F (2.7) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYC2 37384673
    847249 8oop:G (2.7) BS01 dna N/A GO:0003677 ... N/A 37384673
    847250 8oop:G (2.7) BS02 dna N/A GO:0003677 ... N/A 37384673
    847251 8oop:G (2.7) BS03 ADP N/A GO:0003677 ... N/A 37384673
    847252 8oop:G (2.7) BS04 ALF N/A GO:0003677 ... N/A 37384673
    847253 8oop:I (2.7) BS01 dna ? GO:0005634 ... G0S590 37384673
    847254 8oop:J (2.7) BS01 dna ? N/A G0S589 37384673
    847255 8oop:J (2.7) BS02 ATP ? N/A G0S589 37384673
    847256 8oop:M (2.7) BS01 dna ? GO:0000786 ... P68431 37384673
    847257 8oop:M (2.7) BS02 dna ? GO:0000786 ... P68431 37384673
    847258 8oop:N (2.7) BS01 dna ? GO:0000781 ... P62805 37384673
    847259 8oop:N (2.7) BS02 dna ? GO:0000781 ... P62805 37384673
    847260 8oop:O (2.7) BS01 dna ? GO:0000786 ... Q93077 37384673
    847261 8oop:O (2.7) BS02 dna ? GO:0000786 ... Q93077 37384673
    847262 8oop:P (2.7) BS01 dna ? GO:0000786 ... P62807 37384673
    847263 8oop:P (2.7) BS02 dna ? GO:0000786 ... P62807 37384673
    847264 8oop:Q (2.7) BS01 dna ? GO:0000786 ... P68431 37384673
    847265 8oop:Q (2.7) BS02 dna ? GO:0000786 ... P68431 37384673
    847266 8oop:R (2.7) BS01 dna ? GO:0000781 ... P62805 37384673
    847267 8oop:R (2.7) BS02 dna ? GO:0000781 ... P62805 37384673
    847268 8ooq:A (2.91) BS01 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847269 8ooq:A (2.91) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847270 8ooq:B (2.91) BS01 MG N/A GO:0003824 ... A0AAN0NP89 38243071
    847271 8ooq:B (2.91) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847272 8ooq:B (2.91) BS03 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847273 8ooq:C (2.91) BS01 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847274 8ooq:C (2.91) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847275 8ooq:D (2.91) BS01 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847276 8ooq:D (2.91) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847277 8ooq:E (2.91) BS01 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847278 8ooq:E (2.91) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847279 8ooq:F (2.91) BS01 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847280 8ooq:F (2.91) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847281 8ooq:G (2.91) BS01 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847282 8ooq:G (2.91) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847283 8ooq:H (2.91) BS01 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847284 8ooq:H (2.91) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847285 8ooq:I (2.91) BS01 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847286 8ooq:I (2.91) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847287 8ooq:J (2.91) BS01 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847288 8ooq:J (2.91) BS02 MG N/A GO:0003824 ... A0AAN0NP89 38243071
    847289 8ooq:J (2.91) BS03 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847290 8ooq:K (2.91) BS01 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847291 8ooq:K (2.91) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847292 8ooq:L (2.91) BS01 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847293 8ooq:L (2.91) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847294 8ooq:P (2.91) BS01 MG N/A GO:0003824 ... A0AAN0NP89 38243071
    847295 8ooq:P (2.91) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847296 8ooq:P (2.91) BS03 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847297 8ooq:Q (2.91) BS01 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847298 8ooq:Q (2.91) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847299 8ooq:S (2.91) BS01 MG N/A GO:0003824 ... A0AAN0NP89 38243071
    847300 8ooq:S (2.91) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847301 8ooq:S (2.91) BS03 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847302 8ooq:T (2.91) BS01 MG N/A GO:0003824 ... A0AAN0NP89 38243071
    847303 8ooq:T (2.91) BS02 MG N/A GO:0003824 ... A0AAN0NP89 38243071
    847304 8ooq:T (2.91) BS03 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847305 8ooq:T (2.91) BS04 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847306 8ooq:U (2.91) BS01 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847307 8ooq:U (2.91) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847308 8ooq:V (2.91) BS01 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847309 8ooq:V (2.91) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847310 8ooq:X (2.91) BS01 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847311 8ooq:X (2.91) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847312 8ooq:Y (2.91) BS01 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847313 8ooq:Y (2.91) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847314 8ooq:Z (2.91) BS01 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847315 8ooq:Z (2.91) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847316 8ooq:a (2.91) BS01 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847317 8ooq:a (2.91) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847318 8ooq:b (2.91) BS01 MG N/A GO:0003824 ... A0AAN0NP89 38243071
    847319 8ooq:b (2.91) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847320 8ooq:b (2.91) BS03 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847321 8ooq:c (2.91) BS01 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847322 8ooq:c (2.91) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    847323 8oor:A (2.87) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYI5 37384673
    847324 8oor:B (2.87) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYI5 37384673
    847325 8oor:C (2.87) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYI5 37384673
    847326 8oor:D (2.87) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYC2 37384673
    847327 8oor:E (2.87) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYC2 37384673
    847328 8oor:F (2.87) BS01 ADP 3.6.4.12 GO:0004386 ... G0RYC2 37384673
    847329 8oor:J (2.87) BS01 ATP ? N/A G0S589 37384673
    847330 8oos:G (3.29) BS01 dna N/A GO:0003677 ... N/A 37384673
    847331 8oos:G (3.29) BS02 dna N/A GO:0003677 ... N/A 37384673
    847332 8oos:G (3.29) BS03 ADP N/A GO:0003677 ... N/A 37384673
    847333 8oos:G (3.29) BS04 ALF N/A GO:0003677 ... N/A 37384673
    847334 8oos:M (3.29) BS01 dna ? GO:0000786 ... P68431 37384673
    847335 8oos:M (3.29) BS02 dna ? GO:0000786 ... P68431 37384673
    847336 8oos:N (3.29) BS01 dna ? GO:0000781 ... P62805 37384673
    847337 8oos:N (3.29) BS02 dna ? GO:0000781 ... P62805 37384673
    847338 8oos:O (3.29) BS01 dna ? GO:0000786 ... Q93077 37384673
    847339 8oos:O (3.29) BS02 dna ? GO:0000786 ... Q93077 37384673
    847340 8oos:P (3.29) BS01 dna ? GO:0000786 ... P62807 37384673
    847341 8oos:P (3.29) BS02 dna ? GO:0000786 ... P62807 37384673
    847342 8oos:Q (3.29) BS01 dna ? GO:0000786 ... P68431 37384673
    847343 8oos:Q (3.29) BS02 dna ? GO:0000786 ... P68431 37384673
    847344 8oos:R (3.29) BS01 dna ? GO:0000781 ... P62805 37384673
    847345 8oos:R (3.29) BS02 dna ? GO:0000781 ... P62805 37384673
    847346 8oot:J (2.85) BS01 ATP ? N/A G0S589 37384673
    847347 8oou:A (2.9) BS01 rna ? GO:0003723 ... P03418 37714861
    847348 8oou:B (2.9) BS01 rna ? GO:0003723 ... P03418 37714861
    847349 8oou:C (2.9) BS01 rna ? GO:0003723 ... P03418 37714861
    847350 8oou:D (2.9) BS01 rna ? GO:0003723 ... P03418 37714861
    847351 8oou:E (2.9) BS01 rna ? GO:0003723 ... P03418 37714861
    847352 8oou:F (2.9) BS01 rna ? GO:0003723 ... P03418 37714861
    847353 8oou:G (2.9) BS01 rna ? GO:0003723 ... P03418 37714861
    847354 8oou:H (2.9) BS01 rna ? GO:0003723 ... P03418 37714861
    847355 8oou:I (2.9) BS01 rna ? GO:0003723 ... P03418 37714861
    847356 8oou:J (2.9) BS01 rna ? GO:0003723 ... P03418 37714861
    847357 8oou:K (2.9) BS01 rna ? GO:0003723 ... P03418 37714861
    847358 8oou:L (2.9) BS01 rna ? GO:0003723 ... P03418 37714861
    847359 8oou:M (2.9) BS01 rna ? GO:0003723 ... P03418 37714861
    847360 8oou:N (2.9) BS01 rna ? GO:0003723 ... P03418 37714861
    847361 8oou:O (2.9) BS01 rna ? GO:0003723 ... P03418 37714861
    847362 8oou:P (2.9) BS01 rna ? GO:0003723 ... P03418 37714861
    847363 8oou:Q (2.9) BS01 rna ? GO:0003723 ... P03418 37714861
    847364 8oou:R (2.9) BS01 rna ? GO:0003723 ... P03418 37714861
    847365 8oou:S (2.9) BS01 rna ? GO:0003723 ... P03418 37714861
    847366 8oou:T (2.9) BS01 rna ? GO:0003723 ... P03418 37714861
    847367 8oov:A (1.7) BS01 PAP 2.7.4.6 GO:0000287 ... P15531 37298313
    847368 8oov:B (1.7) BS01 PAP 2.7.4.6 GO:0000287 ... P15531 37298313
    847369 8oov:C (1.7) BS01 PAP 2.7.4.6 GO:0000287 ... P15531 37298313
    847370 8oow:A (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847371 8oow:B (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847372 8oow:C (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847373 8oow:D (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847374 8oow:E (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847375 8oow:F (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847376 8oow:G (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847377 8oow:H (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847378 8oow:I (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847379 8oow:J (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847380 8oow:K (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847381 8oow:L (2.64) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847382 8oox:A (3.09) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847383 8oox:B (3.09) BS01 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847384 8ooy:A (4.0) BS01 rna 2.7.7.7 GO:0003676 ... P00582 37620586
    847385 8ooy:A (4.0) BS02 rna 2.7.7.7 GO:0003676 ... P00582 37620586
    847386 8ooy:A (4.0) BS03 dna 2.7.7.7 GO:0003676 ... P00582 37620586
    847387 8ooz:A (2.7) BS01 ATP 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847388 8ooz:A (2.7) BS02 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847389 8ooz:B (2.7) BS01 ATP 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847390 8ooz:B (2.7) BS02 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847391 8ooz:C (2.7) BS01 ATP 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847392 8ooz:C (2.7) BS02 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847393 8ooz:C (2.7) BS03 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847394 8ooz:D (2.7) BS01 ATP 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847395 8ooz:D (2.7) BS02 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847396 8ooz:E (2.7) BS01 ATP 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847397 8ooz:E (2.7) BS02 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847398 8ooz:F (2.7) BS01 ATP 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847399 8ooz:F (2.7) BS02 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847400 8ooz:F (2.7) BS03 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).