SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    847401 8ooz:G (2.7) BS01 ATP 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847402 8ooz:G (2.7) BS02 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847403 8ooz:H (2.7) BS01 ATP 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847404 8ooz:H (2.7) BS02 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847405 8ooz:I (2.7) BS01 ATP 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847406 8ooz:I (2.7) BS02 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847407 8ooz:J (2.7) BS01 ATP 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847408 8ooz:J (2.7) BS02 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847409 8ooz:K (2.7) BS01 ATP 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847410 8ooz:K (2.7) BS02 ATP 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847411 8ooz:K (2.7) BS03 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847412 8ooz:L (2.7) BS01 ATP 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847413 8ooz:L (2.7) BS02 MG 6.3.1.2 GO:0003824 ... A0A832VZP6 38243071
    847414 8op0:A (1.54) BS01 peptide N/A N/A N/A 38484799
    847415 8op1:A (3.5) BS01 rna ? GO:0003723 ... P03418 37714861
    847416 8op1:A (3.5) BS02 rna ? GO:0003723 ... P03418 37714861
    847417 8op1:B (3.5) BS01 rna ? GO:0003723 ... P03418 37714861
    847418 8op1:B (3.5) BS02 rna ? GO:0003723 ... P03418 37714861
    847419 8op1:C (3.5) BS01 rna ? GO:0003723 ... P03418 37714861
    847420 8op1:D (3.5) BS01 rna ? GO:0003723 ... P03418 37714861
    847421 8op1:D (3.5) BS02 rna ? GO:0003723 ... P03418 37714861
    847422 8op1:E (3.5) BS01 rna ? GO:0003723 ... P03418 37714861
    847423 8op1:E (3.5) BS02 rna ? GO:0003723 ... P03418 37714861
    847424 8op2:A (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    847425 8op2:B (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    847426 8op2:D (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    847427 8op2:E (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    847428 8op2:G (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    847429 8op2:H (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    847430 8op2:J (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    847431 8op2:K (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    847432 8op2:M (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    847433 8op2:N (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    847434 8op2:P (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    847435 8op2:Q (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    847436 8op2:S (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    847437 8op2:T (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    847438 8op2:c (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    847439 8op2:d (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    847440 8op2:g (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    847441 8op2:h (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    847442 8op2:k (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    847443 8op2:l (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    847444 8op4:A (3.2) BS01 ANP N/A GO:0005783 ... G0S4Z4 39505844
    847445 8op5:A (3.47) BS01 ADP N/A GO:0005783 ... G0S4Z4 39505844
    847446 8op5:A (3.47) BS02 ALF N/A GO:0005783 ... G0S4Z4 39505844
    847447 8op5:A (3.47) BS03 MG N/A GO:0005783 ... G0S4Z4 39505844
    847448 8op6:A (3.79) BS01 ALF N/A GO:0005783 ... G0S4Z4 39505844
    847449 8op6:A (3.79) BS02 MG N/A GO:0005783 ... G0S4Z4 39505844
    847450 8op7:A (3.5) BS01 BEF N/A GO:0005783 ... G0S4Z4 39505844
    847451 8op7:A (3.5) BS02 MG N/A GO:0005783 ... G0S4Z4 39505844
    847452 8op8:A (3.48) BS01 ALF N/A GO:0005783 ... G0S4Z4 39505844
    847453 8op8:A (3.48) BS02 MG N/A GO:0005783 ... G0S4Z4 39505844
    847454 8op9:A (3.36) BS01 ABU ? GO:0004888 ... P24046 37659407
    847455 8op9:A (3.36) BS02 ABU ? GO:0004888 ... P24046 37659407
    847456 8op9:B (3.36) BS01 ABU ? GO:0004888 ... P24046 37659407
    847457 8op9:B (3.36) BS02 ABU ? GO:0004888 ... P24046 37659407
    847458 8op9:C (3.36) BS01 ABU ? GO:0004888 ... P24046 37659407
    847459 8op9:D (3.36) BS01 ABU ? GO:0004888 ... P24046 37659407
    847460 8op9:E (3.36) BS01 ABU ? GO:0004888 ... P24046 37659407
    847461 8op9:E (3.36) BS02 ABU ? GO:0004888 ... P24046 37659407
    847462 8opc:Aa (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847463 8opc:Ac (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847464 8opc:Ae (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847465 8opc:Ag (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847466 8opc:Ai (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847467 8opc:Ak (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847468 8opc:Am (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847469 8opc:Ao (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847470 8opc:Aq (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847471 8opc:As (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847472 8opc:Au (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847473 8opc:Aw (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847474 8opc:Ay (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847475 8opc:Ba (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847476 8opc:Bc (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847477 8opc:Be (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847478 8opc:Bg (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847479 8opc:Bi (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847480 8opc:Bk (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847481 8opc:Bm (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847482 8opc:Bo (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847483 8opc:Bq (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847484 8opc:Bs (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847485 8opc:Bu (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847486 8opc:Bw (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847487 8opc:By (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847488 8opc:Ca (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847489 8opc:Cc (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    847490 8ope:Aa (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    847491 8ope:Ac (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    847492 8ope:Ae (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    847493 8ope:Ag (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    847494 8ope:Ai (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    847495 8ope:Ak (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    847496 8ope:Am (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    847497 8ope:Ao (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    847498 8ope:Aq (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    847499 8ope:As (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    847500 8ope:Au (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    847501 8ope:Aw (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    847502 8ope:Ay (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    847503 8ope:Ba (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    847504 8ope:Bc (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    847505 8ope:Be (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    847506 8ope:Bg (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    847507 8ope:Bi (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    847508 8ope:Bk (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    847509 8ope:Bm (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    847510 8ope:Bo (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    847511 8opi:A (1.83) BS01 peptide N/A N/A N/A 38484799
    847512 8opl:Aa (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847513 8opl:Ab (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847514 8opl:Ac (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847515 8opl:Ad (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847516 8opl:Ae (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847517 8opl:Af (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847518 8opl:Ag (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847519 8opl:Ah (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847520 8opl:Ai (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847521 8opl:As (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847522 8opl:At (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847523 8opl:Au (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847524 8opl:Av (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847525 8opl:Aw (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847526 8opl:Ax (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847527 8opl:Ay (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847528 8opl:Az (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847529 8opl:Ba (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847530 8opl:Bk (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847531 8opl:Bl (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847532 8opl:Bm (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847533 8opl:Bn (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847534 8opl:Bo (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847535 8opl:Bp (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847536 8opl:Bq (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847537 8opl:Br (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847538 8opl:Bs (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    847539 8opm:A (3.7) BS01 SIA ? GO:0003700 ... E0YJ44
    P03069
    37794193
    847540 8opm:A (3.7) BS02 5N6 ? GO:0003700 ... E0YJ44
    P03069
    37794193
    847541 8opm:B (3.7) BS01 SIA ? GO:0003700 ... E0YJ44
    P03069
    37794193
    847542 8opm:B (3.7) BS02 5N6 ? GO:0003700 ... E0YJ44
    P03069
    37794193
    847543 8opm:C (3.7) BS01 SIA ? GO:0003700 ... E0YJ44
    P03069
    37794193
    847544 8opm:C (3.7) BS02 5N6 ? GO:0003700 ... E0YJ44
    P03069
    37794193
    847545 8opn:A (4.7) BS01 SIA ? GO:0003700 ... E0YJ44
    P03069
    37794193
    847546 8opn:A (4.7) BS02 5N6 ? GO:0003700 ... E0YJ44
    P03069
    37794193
    847547 8opn:B (4.7) BS01 SIA ? GO:0003700 ... E0YJ44
    P03069
    37794193
    847548 8opn:B (4.7) BS02 5N6 ? GO:0003700 ... E0YJ44
    P03069
    37794193
    847549 8opn:C (4.7) BS01 SIA ? GO:0003700 ... E0YJ44
    P03069
    37794193
    847550 8opn:C (4.7) BS02 5N6 ? GO:0003700 ... E0YJ44
    P03069
    37794193
    847551 8opo:A (3.6) BS01 5N6 ? GO:0003700 ... E0YJ44
    P03069
    37794193
    847552 8opo:B (3.6) BS01 5N6 ? GO:0003700 ... E0YJ44
    P03069
    37794193
    847553 8opo:C (3.6) BS01 5N6 ? GO:0003700 ... E0YJ44
    P03069
    37794193
    847554 8opp:A (3.76) BS01 rna N/A GO:0001556 ... Q5VYS8 39054354
    847555 8opp:A (3.76) BS02 P5E N/A GO:0001556 ... Q5VYS8 39054354
    847556 8opr:A (1.811) BS01 CA ? N/A P94217 37923757
    847557 8opr:A (1.811) BS02 CA ? N/A P94217 37923757
    847558 8opr:A (1.811) BS03 CA ? N/A P94217 37923757
    847559 8ops:A (3.82) BS01 rna N/A GO:0001556 ... Q5VYS8 39054354
    847560 8ops:B (3.82) BS01 rna N/A GO:0000932 ... Q9H9Z2 39054354
    847561 8ops:B (3.82) BS02 ZN N/A GO:0000932 ... Q9H9Z2 39054354
    847562 8opt:A (3.65) BS01 rna N/A GO:0001556 ... Q5VYS8 39054354
    847563 8opt:A (3.65) BS02 ZN N/A GO:0001556 ... Q5VYS8 39054354
    847564 8opt:B (3.65) BS01 rna N/A GO:0000932 ... Q9H9Z2 39054354
    847565 8opt:B (3.65) BS02 ZN N/A GO:0000932 ... Q9H9Z2 39054354
    847566 8opu:A (3.04) BS01 08D 1.1.1.35 GO:0000166 ... O53872 39012716
    847567 8opu:B (3.04) BS01 08D 1.1.1.35 GO:0000166 ... O53872 39012716
    847568 8opu:B (3.04) BS02 08D 1.1.1.35 GO:0000166 ... O53872 39012716
    847569 8opu:C (3.04) BS01 08D 2.3.1.- GO:0003985 ... O53871 39012716
    847570 8opu:D (3.04) BS01 08D 2.3.1.- GO:0003985 ... O53871 39012716
    847571 8opv:A (2.8) BS01 STL 1.1.1.35 GO:0000166 ... O53872 39012716
    847572 8opv:A (2.8) BS02 STL 1.1.1.35 GO:0000166 ... O53872 39012716
    847573 8opv:B (2.8) BS01 STL 1.1.1.35 GO:0000166 ... O53872 39012716
    847574 8opv:B (2.8) BS02 STL 1.1.1.35 GO:0000166 ... O53872 39012716
    847575 8opx:C (2.9) BS01 GLC 2.3.1.- GO:0003985 ... O53871 39012716
    847576 8opx:D (2.9) BS01 GLC 2.3.1.- GO:0003985 ... O53871 39012716
    847577 8opx:D (2.9) BS02 GLC 2.3.1.- GO:0003985 ... O53871 39012716
    847578 8opy:D (2.45) BS01 DNQ 2.3.1.- GO:0003985 ... O53871 39012716
    847579 8oq2:A (1.91) BS01 NAP 1.17.1.9 GO:0000166 ... D7A8L2 N/A
    847580 8oq2:B (1.91) BS01 NAP 1.17.1.9 GO:0000166 ... D7A8L2 N/A
    847581 8oq2:B (1.91) BS02 AZI 1.17.1.9 GO:0000166 ... D7A8L2 N/A
    847582 8oq2:B (1.91) BS03 AZI 1.17.1.9 GO:0000166 ... D7A8L2 N/A
    847583 8oq2:B (1.91) BS04 AZI 1.17.1.9 GO:0000166 ... D7A8L2 N/A
    847584 8oq2:C (1.91) BS01 NAP 1.17.1.9 GO:0000166 ... D7A8L2 N/A
    847585 8oq2:C (1.91) BS02 AZI 1.17.1.9 GO:0000166 ... D7A8L2 N/A
    847586 8oq2:D (1.91) BS01 NAP 1.17.1.9 GO:0000166 ... D7A8L2 N/A
    847587 8oq2:E (1.91) BS01 NAP 1.17.1.9 GO:0000166 ... D7A8L2 N/A
    847588 8oq2:F (1.91) BS01 NAP 1.17.1.9 GO:0000166 ... D7A8L2 N/A
    847589 8oq6:A (3.21) BS01 7P9 ? GO:0004888 ... P24046 37659407
    847590 8oq6:B (3.21) BS01 7P9 ? GO:0004888 ... P24046 37659407
    847591 8oq6:C (3.21) BS01 7P9 ? GO:0004888 ... P24046 37659407
    847592 8oq6:D (3.21) BS01 7P9 ? GO:0004888 ... P24046 37659407
    847593 8oq6:E (3.21) BS01 7P9 ? GO:0004888 ... P24046 37659407
    847594 8oq7:A (2.2) BS01 VZA ? GO:0004888 ... P24046 37659407
    847595 8oq7:B (2.2) BS01 VZA ? GO:0004888 ... P24046 37659407
    847596 8oq7:C (2.2) BS01 VZA ? GO:0004888 ... P24046 37659407
    847597 8oq7:D (2.2) BS01 VZA ? GO:0004888 ... P24046 37659407
    847598 8oq7:E (2.2) BS01 VZA ? GO:0004888 ... P24046 37659407
    847599 8oq8:A (2.9) BS01 RI5 ? GO:0004888 ... P24046 37659407
    847600 8oq8:E (2.9) BS01 RI5 ? GO:0004888 ... P24046 37659407

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).