SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    847601 8oq9:A (1.65) BS01 ZN 2.7.11.1 N/A Q8WZ42 37549721
    847602 8oq9:B (1.65) BS01 ZN 2.7.11.1 N/A Q8WZ42 37549721
    847603 8oq9:C (1.65) BS01 ZN 2.7.11.1 N/A Q8WZ42 37549721
    847604 8oqa:A (2.9) BS01 ABU ? GO:0004888 ... P24046 37659407
    847605 8oqa:A (2.9) BS02 RI5 ? GO:0004888 ... P24046 37659407
    847606 8oqa:B (2.9) BS01 ABU ? GO:0004888 ... P24046 37659407
    847607 8oqa:B (2.9) BS02 RI5 ? GO:0004888 ... P24046 37659407
    847608 8oqa:C (2.9) BS01 ABU ? GO:0004888 ... P24046 37659407
    847609 8oqa:D (2.9) BS01 ABU ? GO:0004888 ... P24046 37659407
    847610 8oqa:D (2.9) BS02 ABU ? GO:0004888 ... P24046 37659407
    847611 8oqa:E (2.9) BS01 ABU ? GO:0004888 ... P24046 37659407
    847612 8oqc:A (1.5) BS01 D1O 4.6.1.18 GO:0003676 ... P61823 37144589
    847613 8oqc:A (1.5) BS02 VVU 4.6.1.18 GO:0003676 ... P61823 37144589
    847614 8oqd:A (1.54) BS01 D1O 4.6.1.18 GO:0003676 ... P61823 37144589
    847615 8oqd:A (1.54) BS02 VVU 4.6.1.18 GO:0003676 ... P61823 37144589
    847616 8oqe:A (1.5) BS01 VVU 4.6.1.18 GO:0003676 ... P61823 37144589
    847617 8oqe:A (1.5) BS02 D1O 4.6.1.18 GO:0003676 ... P61823 37144589
    847618 8oqf:A (1.5) BS01 VVU 4.6.1.18 GO:0003676 ... P61823 37144589
    847619 8oqg:A (1.6) BS01 VVU 4.6.1.18 GO:0003676 ... P61823 37144589
    847620 8oqg:A (1.6) BS02 VW5 4.6.1.18 GO:0003676 ... P61823 37144589
    847621 8oqh:A (1.76) BS01 ZN 3.1.3.78 GO:0034597 ... Q86T03 N/A
    847622 8oqh:A (1.76) BS02 ZN 3.1.3.78 GO:0034597 ... Q86T03 N/A
    847623 8oqh:B (1.76) BS01 ZN 3.1.3.78 GO:0034597 ... Q86T03 N/A
    847624 8oqh:B (1.76) BS02 ZN 3.1.3.78 GO:0034597 ... Q86T03 N/A
    847625 8oqj:B (1.64) BS01 ZN 2.3.1.12 GO:0016746 ... P06959 38324697
    847626 8oql:A (2.7) BS01 ARF 1.1.1.35 GO:0000166 ... O53872 39012716
    847627 8oql:A (2.7) BS02 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    847628 8oql:A (2.7) BS03 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    847629 8oql:A (2.7) BS04 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    847630 8oql:A (2.7) BS05 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    847631 8oql:A (2.7) BS06 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    847632 8oql:A (2.7) BS07 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    847633 8oql:B (2.7) BS01 ARF 1.1.1.35 GO:0000166 ... O53872 39012716
    847634 8oql:B (2.7) BS02 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    847635 8oql:B (2.7) BS03 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    847636 8oql:B (2.7) BS04 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    847637 8oql:B (2.7) BS05 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    847638 8oql:B (2.7) BS06 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    847639 8oql:B (2.7) BS07 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    847640 8oql:B (2.7) BS08 A9J 1.1.1.35 GO:0000166 ... O53872 39012716
    847641 8oql:C (2.7) BS01 A9J 2.3.1.- GO:0003985 ... O53871 39012716
    847642 8oql:C (2.7) BS02 A9J 2.3.1.- GO:0003985 ... O53871 39012716
    847643 8oql:D (2.7) BS01 A9J 2.3.1.- GO:0003985 ... O53871 39012716
    847644 8oql:D (2.7) BS02 A9J 2.3.1.- GO:0003985 ... O53871 39012716
    847645 8oql:D (2.7) BS03 A9J 2.3.1.- GO:0003985 ... O53871 39012716
    847646 8oqm:D (3.2) BS01 VWO 2.3.1.- GO:0003985 ... O53871 39012716
    847647 8oqn:A (2.2) BS01 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    847648 8oqn:A (2.2) BS02 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    847649 8oqn:A (2.2) BS03 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    847650 8oqn:A (2.2) BS04 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    847651 8oqn:A (2.2) BS05 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    847652 8oqn:A (2.2) BS06 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    847653 8oqn:B (2.2) BS01 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    847654 8oqn:B (2.2) BS02 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    847655 8oqn:B (2.2) BS03 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    847656 8oqn:B (2.2) BS04 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    847657 8oqn:B (2.2) BS05 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    847658 8oqn:B (2.2) BS06 W3U 1.1.1.35 GO:0000166 ... O53872 39012716
    847659 8oqo:A (2.6) BS01 VXH 1.1.1.35 GO:0000166 ... O53872 39012716
    847660 8oqo:A (2.6) BS02 VXH 1.1.1.35 GO:0000166 ... O53872 39012716
    847661 8oqo:B (2.6) BS01 VXH 1.1.1.35 GO:0000166 ... O53872 39012716
    847662 8oqo:B (2.6) BS02 VXH 1.1.1.35 GO:0000166 ... O53872 39012716
    847663 8oqo:B (2.6) BS03 VXH 1.1.1.35 GO:0000166 ... O53872 39012716
    847664 8oqo:C (2.6) BS01 VXH 2.3.1.- GO:0003985 ... O53871 39012716
    847665 8oqo:D (2.6) BS01 VXH 2.3.1.- GO:0003985 ... O53871 39012716
    847666 8oqp:A (2.18) BS01 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847667 8oqp:A (2.18) BS02 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847668 8oqp:A (2.18) BS03 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847669 8oqp:A (2.18) BS04 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847670 8oqp:A (2.18) BS05 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847671 8oqp:A (2.18) BS06 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847672 8oqp:A (2.18) BS07 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847673 8oqp:B (2.18) BS01 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847674 8oqp:B (2.18) BS02 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847675 8oqp:B (2.18) BS03 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847676 8oqp:B (2.18) BS04 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847677 8oqp:B (2.18) BS05 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847678 8oqp:B (2.18) BS06 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847679 8oqp:B (2.18) BS07 VXZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847680 8oqp:C (2.18) BS01 VXZ 2.3.1.- GO:0003985 ... O53871 39012716
    847681 8oqp:C (2.18) BS02 VXZ 2.3.1.- GO:0003985 ... O53871 39012716
    847682 8oqp:D (2.18) BS01 VXZ 2.3.1.- GO:0003985 ... O53871 39012716
    847683 8oqp:D (2.18) BS02 VXZ 2.3.1.- GO:0003985 ... O53871 39012716
    847684 8oqp:D (2.18) BS03 VXZ 2.3.1.- GO:0003985 ... O53871 39012716
    847685 8oqp:D (2.18) BS04 VXZ 2.3.1.- GO:0003985 ... O53871 39012716
    847686 8oqq:A (2.59) BS01 VWE 1.1.1.35 GO:0000166 ... O53872 39012716
    847687 8oqq:A (2.59) BS02 VWE 1.1.1.35 GO:0000166 ... O53872 39012716
    847688 8oqq:B (2.59) BS01 VWE 1.1.1.35 GO:0000166 ... O53872 39012716
    847689 8oqq:B (2.59) BS02 VWE 1.1.1.35 GO:0000166 ... O53872 39012716
    847690 8oqr:A (2.4) BS01 VWT 1.1.1.35 GO:0000166 ... O53872 39012716
    847691 8oqr:A (2.4) BS02 VWT 1.1.1.35 GO:0000166 ... O53872 39012716
    847692 8oqr:A (2.4) BS03 VWT 1.1.1.35 GO:0000166 ... O53872 39012716
    847693 8oqr:A (2.4) BS04 VWT 1.1.1.35 GO:0000166 ... O53872 39012716
    847694 8oqr:B (2.4) BS01 VWT 1.1.1.35 GO:0000166 ... O53872 39012716
    847695 8oqr:B (2.4) BS02 VWT 1.1.1.35 GO:0000166 ... O53872 39012716
    847696 8oqs:A (2.33) BS01 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847697 8oqs:A (2.33) BS02 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847698 8oqs:A (2.33) BS03 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847699 8oqs:A (2.33) BS04 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847700 8oqs:A (2.33) BS05 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847701 8oqs:A (2.33) BS06 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847702 8oqs:A (2.33) BS07 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847703 8oqs:B (2.33) BS01 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847704 8oqs:B (2.33) BS02 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847705 8oqs:B (2.33) BS03 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847706 8oqs:B (2.33) BS04 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847707 8oqs:B (2.33) BS05 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847708 8oqs:B (2.33) BS06 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847709 8oqs:B (2.33) BS07 VWZ 1.1.1.35 GO:0000166 ... O53872 39012716
    847710 8oqs:C (2.33) BS01 VWZ 2.3.1.- GO:0003985 ... O53871 39012716
    847711 8oqs:D (2.33) BS01 VWZ 2.3.1.- GO:0003985 ... O53871 39012716
    847712 8oqt:A (2.62) BS01 VXC 1.1.1.35 GO:0000166 ... O53872 39012716
    847713 8oqt:A (2.62) BS02 VXC 1.1.1.35 GO:0000166 ... O53872 39012716
    847714 8oqt:A (2.62) BS03 VXC 1.1.1.35 GO:0000166 ... O53872 39012716
    847715 8oqt:B (2.62) BS01 VXC 1.1.1.35 GO:0000166 ... O53872 39012716
    847716 8oqt:B (2.62) BS02 VXC 1.1.1.35 GO:0000166 ... O53872 39012716
    847717 8oqt:B (2.62) BS03 VXC 1.1.1.35 GO:0000166 ... O53872 39012716
    847718 8oqu:A (2.89) BS01 VXN 1.1.1.35 GO:0000166 ... O53872 39012716
    847719 8oqu:A (2.89) BS02 VXN 1.1.1.35 GO:0000166 ... O53872 39012716
    847720 8oqu:A (2.89) BS03 VXN 1.1.1.35 GO:0000166 ... O53872 39012716
    847721 8oqu:B (2.89) BS01 VXN 1.1.1.35 GO:0000166 ... O53872 39012716
    847722 8oqu:B (2.89) BS02 VXN 1.1.1.35 GO:0000166 ... O53872 39012716
    847723 8oqu:B (2.89) BS03 VXN 1.1.1.35 GO:0000166 ... O53872 39012716
    847724 8oqv:A (2.78) BS01 VWI 1.1.1.35 GO:0000166 ... O53872 39012716
    847725 8oqv:A (2.78) BS02 VWI 1.1.1.35 GO:0000166 ... O53872 39012716
    847726 8oqv:A (2.78) BS03 VWI 1.1.1.35 GO:0000166 ... O53872 39012716
    847727 8oqv:A (2.78) BS04 VWI 1.1.1.35 GO:0000166 ... O53872 39012716
    847728 8oqv:A (2.78) BS05 VWI 1.1.1.35 GO:0000166 ... O53872 39012716
    847729 8oqv:B (2.78) BS01 VWI 1.1.1.35 GO:0000166 ... O53872 39012716
    847730 8oqv:B (2.78) BS02 VWI 1.1.1.35 GO:0000166 ... O53872 39012716
    847731 8oqv:B (2.78) BS03 VWI 1.1.1.35 GO:0000166 ... O53872 39012716
    847732 8oqx:A (2.12) BS01 ACP ? N/A G8UQH9 37481208
    847733 8oqx:B (2.12) BS01 ACP ? N/A G8UQH9 37481208
    847734 8oqz:A (3.4) BS01 peptide ? GO:0016020 ... Q92542 38802343
    847735 8oqz:B (3.4) BS01 peptide 3.4.23.- GO:0000045 ... P49768 38802343
    847736 8or0:B (3.1) BS01 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37339624
    847737 8or0:B (3.1) BS02 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37339624
    847738 8or1:A (3.5) BS01 VYC ? N/A Q9NZQ7 37496104
    847739 8or1:B (3.5) BS01 VYC ? N/A Q9NZQ7 37496104
    847740 8or2:B (3.2) BS01 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37339624
    847741 8or2:B (3.2) BS02 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37339624
    847742 8or2:B (3.2) BS03 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37339624
    847743 8or3:B (2.9) BS01 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37339624
    847744 8or3:B (2.9) BS02 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37339624
    847745 8or3:B (2.9) BS03 ZN 2.3.2.27
    2.3.2.32
    GO:0000165 ... P62877 37339624
    847746 8or9:A (1.9) BS01 PLP 4.1.1.28 GO:0001822 ... P20711 37466248
    847747 8ora:A (2.4) BS01 PLP 4.1.1.28 GO:0001822 ... P20711 37466248
    847748 8ora:A (2.4) BS02 W5I 4.1.1.28 GO:0001822 ... P20711 37466248
    847749 8orc:A (2.1) BS01 VY8 3.1.1.7 GO:0001919 ... P21836 39291389
    847750 8orc:B (2.1) BS01 VY8 3.1.1.7 GO:0001919 ... P21836 39291389
    847751 8orc:B (2.1) BS02 MXE 3.1.1.7 GO:0001919 ... P21836 39291389
    847752 8ord:A (3.9) BS01 ADP ? GO:0003203 ... F1RCB6 37480427
    847753 8ord:B (3.9) BS01 ADP ? GO:0003203 ... F1RCB6 37480427
    847754 8ord:C (3.9) BS01 ADP ? GO:0003203 ... F1RCB6 37480427
    847755 8ord:D (3.9) BS01 ADP ? GO:0003203 ... F1RCB6 37480427
    847756 8ord:E (3.9) BS01 ADP ? GO:0003203 ... F1RCB6 37480427
    847757 8orh:A (4.2) BS01 FAD ? GO:0016491 ... A0A8A5IZP6 38659623
    847758 8orh:B (4.2) BS01 FAD ? GO:0016491 ... A0A8A5IZP6 38659623
    847759 8ori:A (1.35) BS01 ZN ? GO:0046872 ... Q2KB35 37494066
    847760 8ori:B (1.35) BS01 ZN ? GO:0046872 ... Q2KB35 37494066
    847761 8ori:C (1.35) BS01 ZN ? GO:0046872 ... Q2KB35 37494066
    847762 8ori:D (1.35) BS01 ZN ? GO:0046872 ... Q2KB35 37494066
    847763 8orj:A (3.3) BS01 MG N/A GO:0001701 ... Q9Y3I0 N/A
    847764 8orj:A (3.3) BS02 MG N/A GO:0001701 ... Q9Y3I0 N/A
    847765 8orj:B (3.3) BS01 NAD N/A GO:0005515 ... Q8WU10 N/A
    847766 8orj:B (3.3) BS02 FDA N/A GO:0005515 ... Q8WU10 N/A
    847767 8orl:A (1.43) BS01 ZN 2.7.11.1 N/A Q8WZ42 37549721
    847768 8orl:B (1.43) BS01 ZN 2.7.11.1 N/A Q8WZ42 37549721
    847769 8orl:C (1.43) BS01 ZN 2.7.11.1 N/A Q8WZ42 37549721
    847770 8orm:J (1.9) BS01 V0G 2.7.11.22
    2.7.11.23
    GO:0000307 ... P50613 38480681
    847771 8oro:AAA (2.0) BS01 VFH 1.13.11.48 GO:0009056 ... O31266 37799987
    847772 8oro:AAA (2.0) BS02 OXY 1.13.11.48 GO:0009056 ... O31266 37799987
    847773 8oro:BBB (2.0) BS01 VFH 1.13.11.48 GO:0009056 ... O31266 37799987
    847774 8oro:BBB (2.0) BS02 OXY 1.13.11.48 GO:0009056 ... O31266 37799987
    847775 8orp:A (2.0) BS01 GLC 3.2.1.1 GO:0003824 ... P08144 37513201
    847776 8orp:A (2.0) BS02 RY7 3.2.1.1 GO:0003824 ... P08144 37513201
    847777 8orp:A (2.0) BS03 GLC 3.2.1.1 GO:0003824 ... P08144 37513201
    847778 8orp:A (2.0) BS04 RY7 3.2.1.1 GO:0003824 ... P08144 37513201
    847779 8orp:B (2.0) BS01 GLC 3.2.1.1 GO:0003824 ... P08144 37513201
    847780 8orp:B (2.0) BS02 RY7 3.2.1.1 GO:0003824 ... P08144 37513201
    847781 8orp:B (2.0) BS03 GLC 3.2.1.1 GO:0003824 ... P08144 37513201
    847782 8orp:B (2.0) BS04 RY7 3.2.1.1 GO:0003824 ... P08144 37513201
    847783 8orq:A (3.2) BS01 MG 2.7.7.6 GO:0000287 ... Q8U0M4 38709902
    847784 8orq:A (3.2) BS02 ZN 2.7.7.6 GO:0000287 ... Q8U0M4 38709902
    847785 8orq:A (3.2) BS03 ZN 2.7.7.6 GO:0000287 ... Q8U0M4 38709902
    847786 8orq:B (3.2) BS01 ZN 2.7.7.6 GO:0000428 ... Q8U0M3 38709902
    847787 8orq:N (3.2) BS01 ZN 2.7.7.6 GO:0000428 ... P60292 38709902
    847788 8orq:P (3.2) BS01 ZN 2.7.7.6 GO:0000428 ... Q8TZI3 38709902
    847789 8ors:A (4.3) BS01 FAD ? GO:0016491 ... A0A8A5IZP6 38659623
    847790 8ors:B (4.3) BS01 FAD ? GO:0016491 ... A0A8A5IZP6 38659623
    847791 8oru:AAA (2.23) BS01 ADP 6.5.1.9 GO:0005524 ... O93732 38045033
    847792 8oru:AAA (2.23) BS02 DG2 6.5.1.9 GO:0005524 ... O93732 38045033
    847793 8oru:AAA (2.23) BS03 DG2 6.5.1.9 GO:0005524 ... O93732 38045033
    847794 8oru:AAA (2.23) BS04 MG 6.5.1.9 GO:0005524 ... O93732 38045033
    847795 8oru:AAA (2.23) BS05 MG 6.5.1.9 GO:0005524 ... O93732 38045033
    847796 8oru:BBB (2.23) BS01 DG2 6.5.1.9 GO:0005524 ... O93732 38045033
    847797 8oru:BBB (2.23) BS02 ADP 6.5.1.9 GO:0005524 ... O93732 38045033
    847798 8oru:BBB (2.23) BS03 MG 6.5.1.9 GO:0005524 ... O93732 38045033
    847799 8oru:BBB (2.23) BS04 MG 6.5.1.9 GO:0005524 ... O93732 38045033
    847800 8oru:BBB (2.23) BS05 PO4 6.5.1.9 GO:0005524 ... O93732 38045033

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
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