SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    847801 8kde:D (2.6) BS09 FE2 N/A GO:0005506 ... P06007 38890314
    847802 8kde:D (2.6) BS10 CLA N/A GO:0005506 ... P06007 38890314
    847803 8kde:E (2.6) BS01 HEM N/A GO:0005506 ... P48268 38890314
    847804 8kde:F (2.6) BS01 HEM N/A GO:0005506 ... Q08363 38890314
    847805 8kde:F (2.6) BS02 VTQ N/A GO:0005506 ... Q08363 38890314
    847806 8kde:H (2.6) BS01 CLA N/A GO:0009523 ... P22666 38890314
    847807 8kde:H (2.6) BS02 CLA N/A GO:0009523 ... P22666 38890314
    847808 8kde:I (2.6) BS01 CLA N/A GO:0005737 ... P59763 38890314
    847809 8kde:K (2.6) BS01 CLA N/A GO:0005737 ... P18263 38890314
    847810 8kde:X (2.6) BS01 VTQ N/A GO:0009523 ... A8I846 38890314
    847811 8kdf:A (3.89) BS01 CLR N/A GO:0003723 ... P08195 39952931
    847812 8kdf:A (3.89) BS02 LBN N/A GO:0003723 ... P08195 39952931
    847813 8kdf:B (3.89) BS01 CLR N/A GO:0002720 ... Q01650 39952931
    847814 8kdf:B (3.89) BS02 LBN N/A GO:0002720 ... Q01650 39952931
    847815 8kdf:B (3.89) BS03 VRW N/A GO:0002720 ... Q01650 39952931
    847816 8kdg:B (3.68) BS01 VU0 N/A GO:0002720 ... Q01650 39952931
    847817 8kdh:A (3.78) BS01 LBN N/A GO:0003723 ... P08195 39952931
    847818 8kdh:B (3.78) BS01 CLR N/A GO:0002720 ... Q01650 39952931
    847819 8kdh:B (3.78) BS02 CLR N/A GO:0002720 ... Q01650 39952931
    847820 8kdh:B (3.78) BS03 LBN N/A GO:0002720 ... Q01650 39952931
    847821 8kdh:B (3.78) BS04 VU0 N/A GO:0002720 ... Q01650 39952931
    847822 8kdj:A (3.73) BS01 CLR N/A GO:0003723 ... P08195 39952931
    847823 8kdj:A (3.73) BS02 LBN N/A GO:0003723 ... P08195 39952931
    847824 8kdj:B (3.73) BS01 LBN N/A GO:0002720 ... Q01650 39952931
    847825 8kdj:B (3.73) BS02 CLR N/A GO:0002720 ... Q01650 39952931
    847826 8kdj:B (3.73) BS03 CLR N/A GO:0002720 ... Q01650 39952931
    847827 8kdj:B (3.73) BS04 LBN N/A GO:0002720 ... Q01650 39952931
    847828 8kdn:B (4.12) BS01 PHE N/A GO:0002720 ... Q01650 39952931
    847829 8kdo:B (4.12) BS01 VUC N/A GO:0002720 ... Q01650 39952931
    847830 8kdu:A (2.3) BS01 I4Q N/A GO:0004175 ... P00760 N/A
    847831 8kdu:A (2.3) BS02 JNR N/A GO:0004175 ... P00760 N/A
    847832 8kdu:A (2.3) BS03 CA N/A GO:0004175 ... P00760 N/A
    847833 8kdx:A (1.01) BS01 peptide 2.7.10.2 N/A P06241 38218365
    847834 8kdz:A (2.6) BS01 SAH N/A GO:0004482 ... A9LID6 40353321
    847835 8kdz:A (2.6) BS02 QAP N/A GO:0004482 ... A9LID6 40353321
    847836 8kdz:A (2.6) BS03 QAP N/A GO:0004482 ... A9LID6 40353321
    847837 8kdz:B (2.6) BS01 SAH N/A GO:0004482 ... A9LID6 40353321
    847838 8ke0:A (4.0) BS01 dna N/A GO:0000786 ... P68431 39984731
    847839 8ke0:A (4.0) BS02 dna N/A GO:0000786 ... P68431 39984731
    847840 8ke0:B (4.0) BS01 dna N/A GO:0000781 ... P62805 39984731
    847841 8ke0:B (4.0) BS02 dna N/A GO:0000781 ... P62805 39984731
    847842 8ke0:C (4.0) BS01 dna N/A GO:0000786 ... P04908 39984731
    847843 8ke0:C (4.0) BS02 dna N/A GO:0000786 ... P04908 39984731
    847844 8ke0:D (4.0) BS01 dna N/A GO:0000786 ... P06899 39984731
    847845 8ke0:E (4.0) BS01 dna N/A GO:0000786 ... P68431 39984731
    847846 8ke0:E (4.0) BS02 dna N/A GO:0000786 ... P68431 39984731
    847847 8ke0:F (4.0) BS01 dna N/A GO:0000781 ... P62805 39984731
    847848 8ke0:F (4.0) BS02 dna N/A GO:0000781 ... P62805 39984731
    847849 8ke0:G (4.0) BS01 dna N/A GO:0000786 ... P04908 39984731
    847850 8ke0:G (4.0) BS02 dna N/A GO:0000786 ... P04908 39984731
    847851 8ke0:H (4.0) BS01 dna N/A GO:0000786 ... P06899 39984731
    847852 8ke0:H (4.0) BS02 dna N/A GO:0000786 ... P06899 39984731
    847853 8ke0:K (4.0) BS01 dna N/A GO:0000785 ... P16403 39984731
    847854 8ke0:K (4.0) BS02 dna N/A GO:0000785 ... P16403 39984731
    847855 8ke1:A (2.50082) BS01 ANP 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    847856 8ke1:A (2.50082) BS02 6CV 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    847857 8ke1:A (2.50082) BS03 MG 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    847858 8ke2:A (2.1964) BS01 MG 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    847859 8ke2:A (2.1964) BS02 ANP 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    847860 8ke2:A (2.1964) BS03 FX9 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    847861 8ke3:A (1.89981) BS01 ANP 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    847862 8ke3:A (1.89981) BS02 MG 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    847863 8ke3:A (1.89981) BS03 FXC 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    847864 8ke4:A (1.75051) BS01 ANP 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    847865 8ke4:A (1.75051) BS02 MG 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    847866 8ke4:A (1.75051) BS03 FXF 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    847867 8ke5:A (1.90007) BS01 MG 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    847868 8ke5:A (1.90007) BS02 ANP 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    847869 8ke5:A (1.90007) BS03 FXL 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    847870 8ke6:A (1.89571) BS01 ANP 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    847871 8ke6:A (1.89571) BS02 MG 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    847872 8ke6:A (1.89571) BS03 FCL 6.1.1.26 GO:0000049 ... Q8PWY1 37904728
    847873 8kea:A (3.44) BS01 peptide N/A GO:0016829 ... A0ACD6B8W4
    A0ACD6B8W5
    38531972
    847874 8kea:B (3.44) BS01 peptide N/A GO:0016829 ... A0ACD6B8W4
    A0ACD6B8W5
    38531972
    847875 8kea:C (3.44) BS01 peptide N/A GO:0016829 ... A0ACD6B8W4
    A0ACD6B8W5
    38531972
    847876 8kea:D (3.44) BS01 peptide N/A N/A A0ACD6B8W8 38531972
    847877 8kea:D (3.44) BS02 peptide N/A N/A A0ACD6B8W8 38531972
    847878 8kea:E (3.44) BS01 peptide N/A N/A A0ACD6B8W8 38531972
    847879 8kea:F (3.44) BS01 peptide N/A N/A A0ACD6B8W8 38531972
    847880 8kei:B (3.56) BS01 HEM 1.-.-.- GO:0005515 ... P04839 38805284
    847881 8kei:B (3.56) BS02 HEM 1.-.-.- GO:0005515 ... P04839 38805284
    847882 8kei:B (3.56) BS03 LBN 1.-.-.- GO:0005515 ... P04839 38805284
    847883 8kei:D (3.56) BS01 HEM ? N/A Q9BQA9 38805284
    847884 8kes:C (3.5) BS01 MAN N/A N/A Q9UBV2 N/A
    847885 8kes:D (3.5) BS01 MAN N/A N/A Q9UBV2 N/A
    847886 8kes:E (3.5) BS01 MAN N/A GO:0030968 ... Q96DZ1 N/A
    847887 8kes:F (3.5) BS01 MAN N/A GO:0030968 ... Q96DZ1 N/A
    847888 8ket:C (3.3) BS01 BMA N/A N/A Q9UBV2 N/A
    847889 8ket:F (3.3) BS01 MAN N/A GO:0030968 ... Q96DZ1 N/A
    847890 8kev:C (3.5) BS01 MAN N/A N/A Q9UBV2 N/A
    847891 8kev:E (3.5) BS01 MAN N/A GO:0030968 ... Q96DZ1 N/A
    847892 8kev:F (3.5) BS01 MAN N/A GO:0030968 ... Q96DZ1 N/A
    847893 8kex:E (3.2) BS01 JW0 N/A GO:0004888 ... P0ABE7
    P42212
    Q96LA9
    39476841
    847894 8kf1:B (3.3) BS01 VW6 N/A GO:0004867 ... P05067 N/A
    847895 8kf1:C (3.3) BS01 VW6 N/A GO:0004867 ... P05067 N/A
    847896 8kf1:F (3.3) BS01 VW6 N/A GO:0004867 ... P05067 N/A
    847897 8kf1:H (3.3) BS01 VW6 N/A GO:0004867 ... P05067 N/A
    847898 8kf1:J (3.3) BS01 VW6 N/A GO:0004867 ... P05067 N/A
    847899 8kf1:J (3.3) BS02 VW6 N/A GO:0004867 ... P05067 N/A
    847900 8kfd:A (1.8) BS01 MG 1.16.3.1 GO:0004322 ... P02794 38627234
    847901 8kfd:A (1.8) BS02 MG 1.16.3.1 GO:0004322 ... P02794 38627234
    847902 8kfh:A (2.27) BS01 HNN N/A GO:0004601 ... P02185 N/A
    847903 8kfh:B (2.27) BS01 HNN N/A GO:0004601 ... P02185 N/A
    847904 8kfi:A (2.37) BS01 HNN N/A GO:0004601 ... P02185 N/A
    847905 8kfi:B (2.37) BS01 HNN N/A GO:0004601 ... P02185 N/A
    847906 8kfj:A (1.9) BS01 HNN N/A GO:0004601 ... P02185 N/A
    847907 8kfj:B (1.9) BS01 HNN N/A GO:0004601 ... P02185 N/A
    847908 8kfo:B (3.6) BS01 OP6 N/A GO:0005615 ... P02769 39461059
    847909 8kfq:A (3.22) BS01 VUZ N/A GO:0004672 ... P00533 N/A
    847910 8kfr:A (2.1) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    847911 8kfr:A (2.1) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    847912 8kfr:A (2.1) BS03 dna N/A GO:0008821 ... B4FCI7 38886375
    847913 8kfr:A (2.1) BS04 CA N/A GO:0008821 ... B4FCI7 38886375
    847914 8kfr:B (2.1) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    847915 8kfr:B (2.1) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    847916 8kfr:B (2.1) BS03 CA N/A GO:0008821 ... B4FCI7 38886375
    847917 8kfs:A (2.15) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    847918 8kfs:A (2.15) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    847919 8kfs:A (2.15) BS03 dna N/A GO:0008821 ... B4FCI7 38886375
    847920 8kfs:B (2.15) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    847921 8kfs:B (2.15) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    847922 8kft:A (2.43) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    847923 8kft:A (2.43) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    847924 8kft:A (2.43) BS03 dna N/A GO:0008821 ... B4FCI7 38886375
    847925 8kft:A (2.43) BS04 MN N/A GO:0008821 ... B4FCI7 38886375
    847926 8kft:B (2.43) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    847927 8kft:B (2.43) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    847928 8kft:B (2.43) BS03 MN N/A GO:0008821 ... B4FCI7 38886375
    847929 8kfu:A (2.3) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    847930 8kfu:A (2.3) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    847931 8kfu:A (2.3) BS03 dna N/A GO:0008821 ... B4FCI7 38886375
    847932 8kfu:A (2.3) BS04 MN N/A GO:0008821 ... B4FCI7 38886375
    847933 8kfu:A (2.3) BS05 MN N/A GO:0008821 ... B4FCI7 38886375
    847934 8kfu:B (2.3) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    847935 8kfu:B (2.3) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    847936 8kfu:B (2.3) BS03 MN N/A GO:0008821 ... B4FCI7 38886375
    847937 8kfu:B (2.3) BS04 MN N/A GO:0008821 ... B4FCI7 38886375
    847938 8kfv:A (2.19) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    847939 8kfv:A (2.19) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    847940 8kfv:A (2.19) BS03 dna N/A GO:0008821 ... B4FCI7 38886375
    847941 8kfv:A (2.19) BS04 MN N/A GO:0008821 ... B4FCI7 38886375
    847942 8kfv:A (2.19) BS05 MN N/A GO:0008821 ... B4FCI7 38886375
    847943 8kfv:B (2.19) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    847944 8kfv:B (2.19) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    847945 8kfv:B (2.19) BS03 MN N/A GO:0008821 ... B4FCI7 38886375
    847946 8kfv:B (2.19) BS04 MN N/A GO:0008821 ... B4FCI7 38886375
    847947 8kfw:A (2.3) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    847948 8kfw:A (2.3) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    847949 8kfw:A (2.3) BS03 dna N/A GO:0008821 ... B4FCI7 38886375
    847950 8kfw:A (2.3) BS04 MN N/A GO:0008821 ... B4FCI7 38886375
    847951 8kfw:A (2.3) BS05 MN N/A GO:0008821 ... B4FCI7 38886375
    847952 8kfw:B (2.3) BS01 dna N/A GO:0008821 ... B4FCI7 38886375
    847953 8kfw:B (2.3) BS02 dna N/A GO:0008821 ... B4FCI7 38886375
    847954 8kfw:B (2.3) BS03 MN N/A GO:0008821 ... B4FCI7 38886375
    847955 8kfw:B (2.3) BS04 MN N/A GO:0008821 ... B4FCI7 38886375
    847956 8kfx:R (2.96) BS01 OS9 ? GO:0004930 ... P51685 38306437
    847957 8kfy:R (3.06) BS01 OXF ? GO:0004930 ... P51685 38306437
    847958 8kg2:A (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    847959 8kg2:B (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    847960 8kg2:C (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    847961 8kg2:D (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    847962 8kg2:E (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    847963 8kg2:F (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    847964 8kg2:G (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    847965 8kg2:H (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    847966 8kg2:I (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    847967 8kg2:J (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    847968 8kg2:K (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    847969 8kg2:L (3.1) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 N/A
    847970 8kg5:A (3.17) BS01 336 N/A GO:0019064 ... P03420
    P10104
    38853183
    847971 8kg5:A (3.17) BS02 336 N/A GO:0019064 ... P03420
    P10104
    38853183
    847972 8kg5:B (3.17) BS01 336 N/A GO:0019064 ... P03420
    P10104
    38853183
    847973 8kg5:B (3.17) BS02 336 N/A GO:0019064 ... P03420
    P10104
    38853183
    847974 8kg5:C (3.17) BS01 336 N/A GO:0019064 ... P03420
    P10104
    38853183
    847975 8kg5:C (3.17) BS02 336 N/A GO:0019064 ... P03420
    P10104
    38853183
    847976 8kg6:2 (3.07) BS01 dna 3.6.4.12 GO:0000727 ... P29469 37730685
    847977 8kg6:2 (3.07) BS02 ZN 3.6.4.12 GO:0000727 ... P29469 37730685
    847978 8kg6:2 (3.07) BS03 ADP 3.6.4.12 GO:0000727 ... P29469 37730685
    847979 8kg6:2 (3.07) BS04 AGS 3.6.4.12 GO:0000727 ... P29469 37730685
    847980 8kg6:3 (3.07) BS01 dna 3.6.4.12 GO:0000727 ... P24279 37730685
    847981 8kg6:3 (3.07) BS02 ADP 3.6.4.12 GO:0000727 ... P24279 37730685
    847982 8kg6:3 (3.07) BS03 AGS 3.6.4.12 GO:0000727 ... P24279 37730685
    847983 8kg6:4 (3.07) BS01 ZN 3.6.4.12 GO:0000727 ... P30665 37730685
    847984 8kg6:4 (3.07) BS02 AGS 3.6.4.12 GO:0000727 ... P30665 37730685
    847985 8kg6:5 (3.07) BS01 dna 3.6.4.12 GO:0000727 ... P29496 37730685
    847986 8kg6:5 (3.07) BS02 ADP 3.6.4.12 GO:0000727 ... P29496 37730685
    847987 8kg6:5 (3.07) BS03 ZN 3.6.4.12 GO:0000727 ... P29496 37730685
    847988 8kg6:5 (3.07) BS04 AGS 3.6.4.12 GO:0000727 ... P29496 37730685
    847989 8kg6:5 (3.07) BS05 MG 3.6.4.12 GO:0000727 ... P29496 37730685
    847990 8kg6:6 (3.07) BS01 dna 3.6.4.12 GO:0000727 ... P53091 37730685
    847991 8kg6:6 (3.07) BS02 dna 3.6.4.12 GO:0000727 ... P53091 37730685
    847992 8kg6:6 (3.07) BS03 ADP 3.6.4.12 GO:0000727 ... P53091 37730685
    847993 8kg6:6 (3.07) BS04 ZN 3.6.4.12 GO:0000727 ... P53091 37730685
    847994 8kg6:6 (3.07) BS05 AGS 3.6.4.12 GO:0000727 ... P53091 37730685
    847995 8kg6:7 (3.07) BS01 dna 3.6.4.12 GO:0000727 ... P38132 37730685
    847996 8kg6:7 (3.07) BS02 ZN 3.6.4.12 GO:0000727 ... P38132 37730685
    847997 8kg6:7 (3.07) BS03 AGS 3.6.4.12 GO:0000727 ... P38132 37730685
    847998 8kg6:L (3.07) BS01 dna ? GO:0000076 ... Q04659 37730685
    847999 8kg6:L (3.07) BS02 dna ? GO:0000076 ... Q04659 37730685
    848000 8kg6:M (3.07) BS01 ZN 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37730685

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).