SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    848001 8kg6:M (3.07) BS02 ZN 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37730685
    848002 8kg8:2 (4.23) BS01 dna 3.6.4.12 GO:0000727 ... P29469 37730685
    848003 8kg8:2 (4.23) BS02 ZN 3.6.4.12 GO:0000727 ... P29469 37730685
    848004 8kg8:2 (4.23) BS03 ADP 3.6.4.12 GO:0000727 ... P29469 37730685
    848005 8kg8:2 (4.23) BS04 AGS 3.6.4.12 GO:0000727 ... P29469 37730685
    848006 8kg8:3 (4.23) BS01 dna 3.6.4.12 GO:0000727 ... P24279 37730685
    848007 8kg8:3 (4.23) BS02 ADP 3.6.4.12 GO:0000727 ... P24279 37730685
    848008 8kg8:3 (4.23) BS03 AGS 3.6.4.12 GO:0000727 ... P24279 37730685
    848009 8kg8:4 (4.23) BS01 dna 3.6.4.12 GO:0000727 ... P30665 37730685
    848010 8kg8:4 (4.23) BS02 ZN 3.6.4.12 GO:0000727 ... P30665 37730685
    848011 8kg8:4 (4.23) BS03 AGS 3.6.4.12 GO:0000727 ... P30665 37730685
    848012 8kg8:5 (4.23) BS01 dna 3.6.4.12 GO:0000727 ... P29496 37730685
    848013 8kg8:5 (4.23) BS02 ADP 3.6.4.12 GO:0000727 ... P29496 37730685
    848014 8kg8:5 (4.23) BS03 ZN 3.6.4.12 GO:0000727 ... P29496 37730685
    848015 8kg8:5 (4.23) BS04 AGS 3.6.4.12 GO:0000727 ... P29496 37730685
    848016 8kg8:6 (4.23) BS01 dna 3.6.4.12 GO:0000727 ... P53091 37730685
    848017 8kg8:6 (4.23) BS02 ADP 3.6.4.12 GO:0000727 ... P53091 37730685
    848018 8kg8:6 (4.23) BS03 ZN 3.6.4.12 GO:0000727 ... P53091 37730685
    848019 8kg8:6 (4.23) BS04 AGS 3.6.4.12 GO:0000727 ... P53091 37730685
    848020 8kg8:7 (4.23) BS01 dna 3.6.4.12 GO:0000727 ... P38132 37730685
    848021 8kg8:7 (4.23) BS02 ZN 3.6.4.12 GO:0000727 ... P38132 37730685
    848022 8kg8:7 (4.23) BS03 AGS 3.6.4.12 GO:0000727 ... P38132 37730685
    848023 8kg8:M (4.23) BS01 ZN 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37730685
    848024 8kg8:M (4.23) BS02 ZN 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37730685
    848025 8kg9:2 (4.52) BS01 ZN 3.6.4.12 GO:0000727 ... P29469 37730685
    848026 8kg9:2 (4.52) BS02 ADP 3.6.4.12 GO:0000727 ... P29469 37730685
    848027 8kg9:2 (4.52) BS03 MG 3.6.4.12 GO:0000727 ... P29469 37730685
    848028 8kg9:2 (4.52) BS04 AGS 3.6.4.12 GO:0000727 ... P29469 37730685
    848029 8kg9:3 (4.52) BS01 dna 3.6.4.12 GO:0000727 ... P24279 37730685
    848030 8kg9:3 (4.52) BS02 dna 3.6.4.12 GO:0000727 ... P24279 37730685
    848031 8kg9:3 (4.52) BS03 ADP 3.6.4.12 GO:0000727 ... P24279 37730685
    848032 8kg9:3 (4.52) BS04 AGS 3.6.4.12 GO:0000727 ... P24279 37730685
    848033 8kg9:4 (4.52) BS01 dna 3.6.4.12 GO:0000727 ... P30665 37730685
    848034 8kg9:4 (4.52) BS02 ZN 3.6.4.12 GO:0000727 ... P30665 37730685
    848035 8kg9:5 (4.52) BS01 dna 3.6.4.12 GO:0000727 ... P29496 37730685
    848036 8kg9:5 (4.52) BS02 ZN 3.6.4.12 GO:0000727 ... P29496 37730685
    848037 8kg9:5 (4.52) BS03 AGS 3.6.4.12 GO:0000727 ... P29496 37730685
    848038 8kg9:5 (4.52) BS04 MG 3.6.4.12 GO:0000727 ... P29496 37730685
    848039 8kg9:6 (4.52) BS01 dna 3.6.4.12 GO:0000727 ... P53091 37730685
    848040 8kg9:6 (4.52) BS02 ADP 3.6.4.12 GO:0000727 ... P53091 37730685
    848041 8kg9:6 (4.52) BS03 ZN 3.6.4.12 GO:0000727 ... P53091 37730685
    848042 8kg9:7 (4.52) BS01 dna 3.6.4.12 GO:0000727 ... P38132 37730685
    848043 8kg9:7 (4.52) BS02 ZN 3.6.4.12 GO:0000727 ... P38132 37730685
    848044 8kg9:7 (4.52) BS03 MG 3.6.4.12 GO:0000727 ... P38132 37730685
    848045 8kg9:7 (4.52) BS04 AGS 3.6.4.12 GO:0000727 ... P38132 37730685
    848046 8kg9:M (4.52) BS01 ZN 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37730685
    848047 8kg9:M (4.52) BS02 ZN 2.7.7.7
    3.1.11.-
    GO:0000166 ... P21951 37730685
    848048 8kgb:A (2.32) BS01 GST N/A GO:0016765 ... C1K5M2
    Q56Y11
    N/A
    848049 8kgb:A (2.32) BS02 IPE N/A GO:0016765 ... C1K5M2
    Q56Y11
    N/A
    848050 8kgb:A (2.32) BS03 IPE N/A GO:0016765 ... C1K5M2
    Q56Y11
    N/A
    848051 8kgb:B (2.32) BS01 IPE N/A GO:0016765 ... C1K5M2
    Q56Y11
    N/A
    848052 8kgb:B (2.32) BS02 IPE N/A GO:0016765 ... C1K5M2
    Q56Y11
    N/A
    848053 8kgb:B (2.32) BS03 IPE N/A GO:0016765 ... C1K5M2
    Q56Y11
    N/A
    848054 8kgb:C (2.32) BS01 IPE N/A GO:0016765 ... C1K5M2
    Q56Y11
    N/A
    848055 8kgb:C (2.32) BS02 GST N/A GO:0016765 ... C1K5M2
    Q56Y11
    N/A
    848056 8kgb:C (2.32) BS03 IPE N/A GO:0016765 ... C1K5M2
    Q56Y11
    N/A
    848057 8kgb:D (2.32) BS01 IPE N/A GO:0016765 ... C1K5M2
    Q56Y11
    N/A
    848058 8kgb:D (2.32) BS02 IPE N/A GO:0016765 ... C1K5M2
    Q56Y11
    N/A
    848059 8kgb:D (2.32) BS03 GST N/A GO:0016765 ... C1K5M2
    Q56Y11
    N/A
    848060 8kgf:A (2.9) BS01 rna N/A N/A N/A 40849498
    848061 8kgg:R (3.06) BS01 WJS N/A GO:0004930 ... O00398 39265572
    848062 8kgm:A (4.8) BS01 dna 5.6.2.2 GO:0000166 ... A0A2X0THW2 38816407
    848063 8kgm:A (4.8) BS02 dna 5.6.2.2 GO:0000166 ... A0A2X0THW2 38816407
    848064 8kgm:B (4.8) BS01 dna 5.6.2.2 GO:0000166 ... A0A2X0THW2 38816407
    848065 8kgm:B (4.8) BS02 dna 5.6.2.2 GO:0000166 ... A0A2X0THW2 38816407
    848066 8kgn:A (5.9) BS01 dna 5.6.2.2 GO:0000166 ... A0A2X0THW2 38816407
    848067 8kgn:A (5.9) BS02 dna 5.6.2.2 GO:0000166 ... A0A2X0THW2 38816407
    848068 8kgn:B (5.9) BS01 dna 5.6.2.2 GO:0000166 ... A0A2X0THW2 38816407
    848069 8kgn:B (5.9) BS02 dna 5.6.2.2 GO:0000166 ... A0A2X0THW2 38816407
    848070 8kgq:A (5.6) BS01 dna 5.6.2.2 GO:0000166 ... A0A2X0THW2 38816407
    848071 8kgq:A (5.6) BS02 dna 5.6.2.2 GO:0000166 ... A0A2X0THW2 38816407
    848072 8kgq:B (5.6) BS01 dna 5.6.2.2 GO:0000166 ... A0A2X0THW2 38816407
    848073 8kgq:B (5.6) BS02 dna 5.6.2.2 GO:0000166 ... A0A2X0THW2 38816407
    848074 8kgr:A (3.2) BS01 dna 5.6.2.2 GO:0000166 ... A0A2X0THW2 38816407
    848075 8kgr:A (3.2) BS02 dna 5.6.2.2 GO:0000166 ... A0A2X0THW2 38816407
    848076 8kgr:B (3.2) BS01 dna 5.6.2.2 GO:0000166 ... A0A2X0THW2 38816407
    848077 8kgr:B (3.2) BS02 dna 5.6.2.2 GO:0000166 ... A0A2X0THW2 38816407
    848078 8kgr:B (3.2) BS03 MG 5.6.2.2 GO:0000166 ... A0A2X0THW2 38816407
    848079 8kgs:A (2.603) BS01 ANP 5.6.2.2 N/A A0A2X0THW2 38816407
    848080 8kgt:A (2.3) BS01 ADP 5.6.2.2 N/A A0A2X0THW2 38816407
    848081 8kgw:A (2.96) BS01 P2E N/A GO:0005319 ... Q92959 N/A
    848082 8kh3:A (2.0) BS01 VWF N/A GO:0004553 ... P23360 N/A
    848083 8kh4:A (3.1) BS01 CLR ? GO:0004930 ... Q8N6U8 37737235
    848084 8kh5:A (2.83) BS01 CLR ? GO:0004930 ... Q9BXC1 37737235
    848085 8kh5:A (2.83) BS02 LPS ? GO:0004930 ... Q9BXC1 37737235
    848086 8kh5:A (2.83) BS03 CLR ? GO:0004930 ... Q9BXC1 37737235
    848087 8kh6:A (1.62) BS01 VVI N/A GO:0004672 ... P22455 38348819
    848088 8kh7:A (1.52) BS01 VVW N/A GO:0004672 ... P22455 38348819
    848089 8kh8:A (1.49) BS01 VVW N/A GO:0004672 ... P22455 38348819
    848090 8kh9:A (1.42) BS01 VVW N/A GO:0004672 ... P22455 38348819
    848091 8khf:4 (3.13) BS01 BQ1 ? GO:0015078 ... P05496 38961288
    848092 8khl:A (2.4) BS01 COA ? GO:0000287 ... Q9I562 38677288
    848093 8khl:B (2.4) BS01 COA ? GO:0000287 ... Q9I562 38677288
    848094 8khl:C (2.4) BS01 COA ? GO:0000287 ... Q9I562 38677288
    848095 8khn:A (1.51) BS01 CO 3.4.11.18 GO:0006508 ... Q6UB28 38102161
    848096 8khn:A (1.51) BS02 CO 3.4.11.18 GO:0006508 ... Q6UB28 38102161
    848097 8kho:A (1.45) BS01 MET 3.4.11.18 GO:0006508 ... Q6UB28 38102161
    848098 8kho:A (1.45) BS02 CO 3.4.11.18 GO:0006508 ... Q6UB28 38102161
    848099 8kho:A (1.45) BS03 CO 3.4.11.18 GO:0006508 ... Q6UB28 38102161
    848100 8khq:A (2.69) BS01 CO ? GO:0120147 ... A0A1I5R890 38058600
    848101 8khq:A (2.69) BS02 HIS ? GO:0120147 ... A0A1I5R890 38058600
    848102 8khq:A (2.69) BS03 CYS ? GO:0120147 ... A0A1I5R890 38058600
    848103 8khq:B (2.69) BS01 CO ? GO:0120147 ... A0A1I5R890 38058600
    848104 8khq:B (2.69) BS02 HIS ? GO:0120147 ... A0A1I5R890 38058600
    848105 8khq:B (2.69) BS03 CYS ? GO:0120147 ... A0A1I5R890 38058600
    848106 8khq:C (2.69) BS01 CO ? GO:0120147 ... A0A1I5R890 38058600
    848107 8khq:C (2.69) BS02 HIS ? GO:0120147 ... A0A1I5R890 38058600
    848108 8khq:C (2.69) BS03 CYS ? GO:0120147 ... A0A1I5R890 38058600
    848109 8khq:D (2.69) BS01 CO ? GO:0120147 ... A0A1I5R890 38058600
    848110 8khq:D (2.69) BS02 HIS ? GO:0120147 ... A0A1I5R890 38058600
    848111 8khq:D (2.69) BS03 CYS ? GO:0120147 ... A0A1I5R890 38058600
    848112 8kht:A (2.05) BS01 FE2 1.-.-.-
    1.14.11.17
    GO:0016491 ... P9WG83 38895101
    848113 8kht:A (2.05) BS02 VY9 1.-.-.-
    1.14.11.17
    GO:0016491 ... P9WG83 38895101
    848114 8kht:B (2.05) BS01 FE2 1.-.-.-
    1.14.11.17
    GO:0016491 ... P9WG83 38895101
    848115 8kht:B (2.05) BS02 VY9 1.-.-.-
    1.14.11.17
    GO:0016491 ... P9WG83 38895101
    848116 8khu:A (2.0) BS01 VX0 ? GO:0005198 ... P03147 37801325
    848117 8khu:A (2.0) BS02 VX0 ? GO:0005198 ... P03147 37801325
    848118 8khu:B (2.0) BS01 VX0 ? GO:0005198 ... P03147 37801325
    848119 8khu:C (2.0) BS01 peptide ? GO:0005198 ... P03147 37801325
    848120 8khu:C (2.0) BS02 VX0 ? GO:0005198 ... P03147 37801325
    848121 8khu:C (2.0) BS03 VX0 ? GO:0005198 ... P03147 37801325
    848122 8khu:D (2.0) BS01 peptide ? GO:0005198 ... P03147 37801325
    848123 8khu:D (2.0) BS02 VX0 ? GO:0005198 ... P03147 37801325
    848124 8khu:E (2.0) BS01 VX0 ? GO:0005198 ... P03147 37801325
    848125 8khu:E (2.0) BS02 VX0 ? GO:0005198 ... P03147 37801325
    848126 8khu:F (2.0) BS01 VX0 ? GO:0005198 ... P03147 37801325
    848127 8khv:A (1.9) BS01 MN N/A GO:0016829 ... A0A286FIB6 40387079
    848128 8khv:A (1.9) BS02 CA N/A GO:0016829 ... A0A286FIB6 40387079
    848129 8khv:A (1.9) BS03 CA N/A GO:0016829 ... A0A286FIB6 40387079
    848130 8khw:A (2.4) BS01 MN N/A GO:0016829 ... A0A4V1YUP8 N/A
    848131 8ki0:A (1.45) BS01 MQP ? N/A Q4K5N8 38495978
    848132 8ki0:A (1.45) BS02 MQP ? N/A Q4K5N8 38495978
    848133 8ki0:B (1.45) BS01 MQP ? N/A Q4K5N8 38495978
    848134 8ki0:B (1.45) BS02 MQP ? N/A Q4K5N8 38495978
    848135 8ki1:A (1.9) BS01 HEM ? N/A Q4K5N8 38495978
    848136 8ki1:B (1.9) BS01 HEM ? N/A Q4K5N8 38495978
    848137 8ki3:4 (2.89) BS01 BQ1 ? GO:0015078 ... P05496 38961288
    848138 8ki3:5 (2.89) BS01 BQ1 ? GO:0015078 ... P05496 38961288
    848139 8ki3:A (2.89) BS01 ATP ? GO:0001937 ... P25705 38961288
    848140 8ki3:B (2.89) BS01 ATP ? GO:0001937 ... P25705 38961288
    848141 8ki3:C (2.89) BS01 ATP ? GO:0001937 ... P25705 38961288
    848142 8ki3:D (2.89) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 38961288
    848143 8ki3:E (2.89) BS01 ATP 7.1.2.2 GO:0001525 ... P06576 38961288
    848144 8ki3:F (2.89) BS01 ADP 7.1.2.2 GO:0001525 ... P06576 38961288
    848145 8ki5:A (2.01) BS01 FOH N/A N/A A0AAJ6N6I8 37804495
    848146 8ki6:A (3.4) BS01 RBV N/A GO:0003968 ... A0A7G8JUR3 40044941
    848147 8ki7:A (3.7) BS01 rna N/A GO:0003968 ... A0A7G8JUQ8 40044941
    848148 8ki7:A (3.7) BS02 rna N/A GO:0003968 ... A0A7G8JUQ8 40044941
    848149 8ki7:A (3.7) BS03 rna N/A GO:0003968 ... A0A7G8JUQ8 40044941
    848150 8ki8:A (3.2) BS01 rna N/A GO:0003968 ... A0A7G8JUR3 40044941
    848151 8kib:A (1.7) BS01 NAP N/A GO:0000287 ... O88844 40064325
    848152 8kib:A (1.7) BS02 OAA N/A GO:0000287 ... O88844 40064325
    848153 8kib:A (1.7) BS03 NAP N/A GO:0000287 ... O88844 40064325
    848154 8kib:A (1.7) BS04 OAA N/A GO:0000287 ... O88844 40064325
    848155 8kib:A (1.7) BS05 OAA N/A GO:0000287 ... O88844 40064325
    848156 8kib:B (1.7) BS01 NAP N/A GO:0000287 ... O88844 40064325
    848157 8kib:B (1.7) BS02 OAA N/A GO:0000287 ... O88844 40064325
    848158 8kib:B (1.7) BS03 NAP N/A GO:0000287 ... O88844 40064325
    848159 8kib:B (1.7) BS04 OAA N/A GO:0000287 ... O88844 40064325
    848160 8kib:C (1.7) BS01 NAP N/A GO:0000287 ... O88844 40064325
    848161 8kib:C (1.7) BS02 OAA N/A GO:0000287 ... O88844 40064325
    848162 8kib:C (1.7) BS03 OAA N/A GO:0000287 ... O88844 40064325
    848163 8kib:D (1.7) BS01 NAP N/A GO:0000287 ... O88844 40064325
    848164 8kib:D (1.7) BS02 OAA N/A GO:0000287 ... O88844 40064325
    848165 8kib:D (1.7) BS03 OAA N/A GO:0000287 ... O88844 40064325
    848166 8kic:A (2.5) BS01 peptide N/A GO:0004252 ... C3SRW2 38351715
    848167 8kic:B (2.5) BS01 peptide N/A GO:0004252 ... C3SRW2 38351715
    848168 8kic:C (2.5) BS01 peptide N/A GO:0004252 ... C3SRW2 38351715
    848169 8kie:j (2.5) BS01 rna N/A GO:0002181 ... P0ADY3 N/A
    848170 8kie:o (2.5) BS01 rna N/A GO:0000027 ... P0A7K6 N/A
    848171 8kie:y (2.5) BS01 rna N/A GO:0004857 ... P0ABU2 N/A
    848172 8kif:A (2.13) BS01 FE2 N/A GO:0016491 ... B2HKM3 38895101
    848173 8kif:A (2.13) BS02 VY9 N/A GO:0016491 ... B2HKM3 38895101
    848174 8kif:B (2.13) BS01 FE2 N/A GO:0016491 ... B2HKM3 38895101
    848175 8kif:B (2.13) BS02 VY9 N/A GO:0016491 ... B2HKM3 38895101
    848176 8kif:C (2.13) BS01 FE2 N/A GO:0016491 ... B2HKM3 38895101
    848177 8kif:C (2.13) BS02 VY9 N/A GO:0016491 ... B2HKM3 38895101
    848178 8kif:D (2.13) BS01 FE2 N/A GO:0016491 ... B2HKM3 38895101
    848179 8kif:D (2.13) BS02 VY9 N/A GO:0016491 ... B2HKM3 38895101
    848180 8kig:R (3.1) BS01 peptide N/A GO:0004930 ... P41968 N/A
    848181 8kig:R (3.1) BS02 CA N/A GO:0004930 ... P41968 N/A
    848182 8kih:A (2.0) BS01 FGG N/A N/A A0AAJ6N6I8 37804495
    848183 8kih:A (2.0) BS02 MG N/A N/A A0AAJ6N6I8 37804495
    848184 8kme:2 (2.1) BS01 peptide 3.4.21.5 GO:0004252 ... P00734 10089309
    848185 8kme:2 (2.1) BS02 peptide 3.4.21.5 GO:0004252 ... P00734 10089309
    848186 8kme:2 (2.1) BS03 peptide 3.4.21.5 GO:0004252 ... P00734 10089309
    848187 8lpr:A (2.25) BS01 peptide 3.4.21.12 GO:0004252 ... P00778 1931963
    848188 8mht:A (2.76) BS01 dna 2.1.1.37 GO:0003886 ... P05102 9783745
    848189 8mht:A (2.76) BS02 dna 2.1.1.37 GO:0003886 ... P05102 9783745
    848190 8mht:A (2.76) BS03 SAH 2.1.1.37 GO:0003886 ... P05102 9783745
    848191 8nse:A (2.25) BS01 ZN 1.14.13.39 GO:0004517 ... P29473 11695891
    848192 8nse:A (2.25) BS02 HEM 1.14.13.39 GO:0004517 ... P29473 11695891
    848193 8nse:A (2.25) BS03 H4B 1.14.13.39 GO:0004517 ... P29473 11695891
    848194 8nse:A (2.25) BS04 NRG 1.14.13.39 GO:0004517 ... P29473 11695891 BindingDB: IC50=1200nM, Ki=750nM
    848195 8nse:A (2.25) BS05 H4B 1.14.13.39 GO:0004517 ... P29473 11695891
    848196 8nse:B (2.25) BS01 ZN 1.14.13.39 GO:0004517 ... P29473 11695891
    848197 8nse:B (2.25) BS02 H4B 1.14.13.39 GO:0004517 ... P29473 11695891
    848198 8nse:B (2.25) BS03 HEM 1.14.13.39 GO:0004517 ... P29473 11695891
    848199 8nse:B (2.25) BS04 H4B 1.14.13.39 GO:0004517 ... P29473 11695891
    848200 8nse:B (2.25) BS05 NRG 1.14.13.39 GO:0004517 ... P29473 11695891 BindingDB: IC50=1200nM, Ki=750nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).