SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    848601 8ova:AS (2.47) BS01 rna ? GO:0003735 ... Q38CD1 37985661
    848602 8ova:AT (2.47) BS01 rna ? GO:0003735 ... Q38AM9 37985661
    848603 8ova:AU (2.47) BS01 rna ? GO:0003735 ... Q57XX0 37985661
    848604 8ova:AV (2.47) BS01 rna ? GO:0003729 ... Q384J9 37985661
    848605 8ova:AW (2.47) BS01 rna ? GO:0000028 ... Q383V7 37985661
    848606 8ova:AX (2.47) BS01 rna ? GO:0003723 ... Q38EW1 37985661
    848607 8ova:AY (2.47) BS01 rna ? GO:0003735 ... Q584U5 37985661
    848608 8ova:AZ (2.47) BS01 rna ? GO:0000028 ... Q57U30 37985661
    848609 8ova:Az (2.47) BS01 rna ? GO:0003676 ... Q382D5 37985661
    848610 8ova:BI (2.47) BS01 rna ? GO:0003723 ... P50885 37985661
    848611 8ova:BI (2.47) BS02 rna ? GO:0003723 ... P50885 37985661
    848612 8ova:BK (2.47) BS01 rna ? GO:0003735 ... Q38EC5 37985661
    848613 8ova:BK (2.47) BS02 rna ? GO:0003735 ... Q38EC5 37985661
    848614 8ova:BK (2.47) BS03 rna ? GO:0003735 ... Q38EC5 37985661
    848615 8ova:BL (2.47) BS01 rna ? GO:0003723 ... Q38EI9 37985661
    848616 8ova:BL (2.47) BS02 rna ? GO:0003723 ... Q38EI9 37985661
    848617 8ova:BN (2.47) BS01 rna ? GO:0003723 ... Q57V55 37985661
    848618 8ova:BN (2.47) BS02 rna ? GO:0003723 ... Q57V55 37985661
    848619 8ova:BO (2.47) BS01 rna ? GO:0003729 ... Q585J5 37985661
    848620 8ova:BO (2.47) BS02 rna ? GO:0003729 ... Q585J5 37985661
    848621 8ova:BO (2.47) BS03 rna ? GO:0003729 ... Q585J5 37985661
    848622 8ova:BO (2.47) BS04 rna ? GO:0003729 ... Q585J5 37985661
    848623 8ova:BP (2.47) BS01 rna ? GO:0003723 ... Q383F5 37985661
    848624 8ova:BP (2.47) BS02 rna ? GO:0003723 ... Q383F5 37985661
    848625 8ova:BP (2.47) BS03 rna ? GO:0003723 ... Q383F5 37985661
    848626 8ova:BQ (2.47) BS01 rna ? GO:0002181 ... Q38CY7 37985661
    848627 8ova:BQ (2.47) BS02 rna ? GO:0002181 ... Q38CY7 37985661
    848628 8ova:BQ (2.47) BS03 rna ? GO:0002181 ... Q38CY7 37985661
    848629 8ova:BR (2.47) BS01 rna ? GO:0002181 ... Q385T6 37985661
    848630 8ova:BR (2.47) BS02 rna ? GO:0002181 ... Q385T6 37985661
    848631 8ova:BR (2.47) BS03 rna ? GO:0002181 ... Q385T6 37985661
    848632 8ova:BR (2.47) BS04 rna ? GO:0002181 ... Q385T6 37985661
    848633 8ova:BS (2.47) BS01 rna ? GO:0002181 ... Q382C4 37985661
    848634 8ova:BS (2.47) BS02 rna ? GO:0002181 ... Q382C4 37985661
    848635 8ova:BS (2.47) BS03 rna ? GO:0002181 ... Q382C4 37985661
    848636 8ova:BT (2.47) BS01 rna ? GO:0003723 ... Q57ZI7 37985661
    848637 8ova:BT (2.47) BS02 rna ? GO:0003723 ... Q57ZI7 37985661
    848638 8ova:BT (2.47) BS03 rna ? GO:0003723 ... Q57ZI7 37985661
    848639 8ova:BT (2.47) BS04 rna ? GO:0003723 ... Q57ZI7 37985661
    848640 8ova:BT (2.47) BS05 rna ? GO:0003723 ... Q57ZI7 37985661
    848641 8ova:BU (2.47) BS01 rna ? GO:0003735 ... Q4FKD4 37985661
    848642 8ova:BU (2.47) BS02 rna ? GO:0003735 ... Q4FKD4 37985661
    848643 8ova:BU (2.47) BS03 rna ? GO:0003735 ... Q4FKD4 37985661
    848644 8ova:BV (2.47) BS01 rna ? GO:0002181 ... Q383R3 37985661
    848645 8ova:BV (2.47) BS02 rna ? GO:0002181 ... Q383R3 37985661
    848646 8ova:BV (2.47) BS03 rna ? GO:0002181 ... Q383R3 37985661
    848647 8ova:BW (2.47) BS01 rna ? GO:0003735 ... Q38DP2 37985661
    848648 8ova:BW (2.47) BS02 rna ? GO:0003735 ... Q38DP2 37985661
    848649 8ova:BW (2.47) BS03 rna ? GO:0003735 ... Q38DP2 37985661
    848650 8ova:BX (2.47) BS01 rna ? GO:0003735 ... P41165 37985661
    848651 8ova:BX (2.47) BS02 rna ? GO:0003735 ... P41165 37985661
    848652 8ova:BX (2.47) BS03 rna ? GO:0003735 ... P41165 37985661
    848653 8ova:BY (2.47) BS01 rna ? GO:0002181 ... Q38B56 37985661
    848654 8ova:BY (2.47) BS02 rna ? GO:0002181 ... Q38B56 37985661
    848655 8ova:BY (2.47) BS03 rna ? GO:0002181 ... Q38B56 37985661
    848656 8ova:BZ (2.47) BS01 rna ? GO:0002181 ... Q38D25 37985661
    848657 8ova:BZ (2.47) BS02 rna ? GO:0002181 ... Q38D25 37985661
    848658 8ova:Ba (2.47) BS01 rna ? GO:0003735 ... Q381J6 37985661
    848659 8ova:Ba (2.47) BS02 rna ? GO:0003735 ... Q381J6 37985661
    848660 8ova:Bb (2.47) BS01 rna ? GO:0003735 ... Q38DN9 37985661
    848661 8ova:Bb (2.47) BS02 rna ? GO:0003735 ... Q38DN9 37985661
    848662 8ova:Bc (2.47) BS01 rna ? GO:0003729 ... Q385E9 37985661
    848663 8ova:Bd (2.47) BS01 rna ? GO:0002181 ... Q383S6 37985661
    848664 8ova:Bd (2.47) BS02 rna ? GO:0002181 ... Q383S6 37985661
    848665 8ova:Be (2.47) BS01 rna ? GO:0002181 ... Q57W56 37985661
    848666 8ova:Be (2.47) BS02 rna ? GO:0002181 ... Q57W56 37985661
    848667 8ova:Be (2.47) BS03 rna ? GO:0002181 ... Q57W56 37985661
    848668 8ova:Bf (2.47) BS01 rna ? GO:0003723 ... Q581Q1 37985661
    848669 8ova:Bf (2.47) BS02 rna ? GO:0003723 ... Q581Q1 37985661
    848670 8ova:Bf (2.47) BS03 rna ? GO:0003723 ... Q581Q1 37985661
    848671 8ova:Bf (2.47) BS04 rna ? GO:0003723 ... Q581Q1 37985661
    848672 8ova:Bg (2.47) BS01 rna ? GO:0003723 ... P49153 37985661
    848673 8ova:Bh (2.47) BS01 rna ? GO:0002181 ... Q38DH8 37985661
    848674 8ova:Bh (2.47) BS02 rna ? GO:0002181 ... Q38DH8 37985661
    848675 8ova:Bh (2.47) BS03 rna ? GO:0002181 ... Q38DH8 37985661
    848676 8ova:Bh (2.47) BS04 rna ? GO:0002181 ... Q38DH8 37985661
    848677 8ova:Bi (2.47) BS01 rna ? GO:0003735 ... Q38CL1 37985661
    848678 8ova:Bj (2.47) BS01 rna ? GO:0003735 ... Q383V6 37985661
    848679 8ova:Bj (2.47) BS02 rna ? GO:0003735 ... Q383V6 37985661
    848680 8ova:Bj (2.47) BS03 rna ? GO:0003735 ... Q383V6 37985661
    848681 8ova:Bk (2.47) BS01 rna ? GO:0000463 ... Q38FW8 37985661
    848682 8ova:Bk (2.47) BS02 rna ? GO:0000463 ... Q38FW8 37985661
    848683 8ova:Bl (2.47) BS01 rna ? GO:0002181 ... Q584G9 37985661
    848684 8ova:Bl (2.47) BS02 rna ? GO:0002181 ... Q584G9 37985661
    848685 8ova:Bl (2.47) BS03 rna ? GO:0002181 ... Q584G9 37985661
    848686 8ova:Bm (2.47) BS01 rna ? GO:0002181 ... Q38CY6 37985661
    848687 8ova:Bm (2.47) BS02 rna ? GO:0002181 ... Q38CY6 37985661
    848688 8ova:Bn (2.47) BS01 rna ? GO:0003723 ... Q386L1 37985661
    848689 8ova:Bn (2.47) BS02 rna ? GO:0003723 ... Q386L1 37985661
    848690 8ova:Bn (2.47) BS03 rna ? GO:0003723 ... Q386L1 37985661
    848691 8ova:Bn (2.47) BS04 ZN ? GO:0003723 ... Q386L1 37985661
    848692 8ova:Bo (2.47) BS01 rna ? GO:0003735 ... Q38AW9 37985661
    848693 8ova:Bo (2.47) BS02 rna ? GO:0003735 ... Q38AW9 37985661
    848694 8ova:Bo (2.47) BS03 rna ? GO:0003735 ... Q38AW9 37985661
    848695 8ova:Bo (2.47) BS04 ZN ? GO:0003735 ... Q38AW9 37985661
    848696 8ova:Bp (2.47) BS01 rna ? GO:0003735 ... Q38FV6 37985661
    848697 8ova:Bp (2.47) BS02 rna ? GO:0003735 ... Q38FV6 37985661
    848698 8ova:Bq (2.47) BS01 rna ? GO:0003735 ... Q57UJ8 37985661
    848699 8ova:Bq (2.47) BS02 rna ? GO:0003735 ... Q57UJ8 37985661
    848700 8ova:Bq (2.47) BS03 rna ? GO:0003735 ... Q57UJ8 37985661
    848701 8ova:Br (2.47) BS01 rna ? GO:0003723 ... Q582N2 37985661
    848702 8ova:Br (2.47) BS02 rna ? GO:0003723 ... Q582N2 37985661
    848703 8ova:Br (2.47) BS03 rna ? GO:0003723 ... Q582N2 37985661
    848704 8ova:Bs (2.47) BS01 rna ? GO:0003735 ... P21899 37985661
    848705 8ova:Bs (2.47) BS02 rna ? GO:0003735 ... P21899 37985661
    848706 8ova:Bs (2.47) BS03 ZN ? GO:0003735 ... P21899 37985661
    848707 8ova:Bt (2.47) BS01 rna ? GO:0003735 ... P17843 37985661
    848708 8ova:Bt (2.47) BS02 rna ? GO:0003735 ... P17843 37985661
    848709 8ova:Bt (2.47) BS03 rna ? GO:0003735 ... P17843 37985661
    848710 8ova:Bu (2.47) BS01 rna ? GO:0000027 ... Q38CY8 37985661
    848711 8ova:Bu (2.47) BS02 rna ? GO:0000027 ... Q38CY8 37985661
    848712 8ova:Bu (2.47) BS03 rna ? GO:0000027 ... Q38CY8 37985661
    848713 8ova:Bv (2.47) BS01 rna ? GO:0000315 ... Q389K1 37985661
    848714 8ova:Bv (2.47) BS02 rna ? GO:0000315 ... Q389K1 37985661
    848715 8ova:Bw (2.47) BS01 rna ? GO:0000463 ... Q57V35 37985661
    848716 8ova:Bw (2.47) BS02 rna ? GO:0000463 ... Q57V35 37985661
    848717 8ova:Bx (2.47) BS01 rna ? GO:0000470 ... Q57VM1 37985661
    848718 8ova:Bx (2.47) BS02 rna ? GO:0000470 ... Q57VM1 37985661
    848719 8ova:Bx (2.47) BS03 rna ? GO:0000470 ... Q57VM1 37985661
    848720 8ova:By (2.47) BS01 rna ? GO:0002181 ... Q38CD0 37985661
    848721 8ova:By (2.47) BS02 rna ? GO:0002181 ... Q38CD0 37985661
    848722 8ova:By (2.47) BS03 rna ? GO:0002181 ... Q38CD0 37985661
    848723 8ova:Bz (2.47) BS01 rna N/A GO:0003735 ... N/A 37985661
    848724 8ovc:C (2.8) BS01 HEC N/A GO:0005506 ... A0R050 38902248
    848725 8ovc:C (2.8) BS02 HEC N/A GO:0005506 ... A0R050 38902248
    848726 8ovc:C (2.8) BS03 MQ9 N/A GO:0005506 ... A0R050 38902248
    848727 8ovc:C (2.8) BS04 WUO N/A GO:0005506 ... A0R050 38902248
    848728 8ovc:G (2.8) BS01 peptide N/A GO:0004497 ... A0R051 38902248
    848729 8ovc:G (2.8) BS02 9YF N/A GO:0004497 ... A0R051 38902248
    848730 8ovc:G (2.8) BS03 9YF N/A GO:0004497 ... A0R051 38902248
    848731 8ovc:G (2.8) BS04 FES N/A GO:0004497 ... A0R051 38902248
    848732 8ovc:H (2.8) BS01 peptide N/A GO:0008121 ... A0R052 38902248
    848733 8ovc:H (2.8) BS02 peptide N/A GO:0008121 ... A0R052 38902248
    848734 8ovc:H (2.8) BS03 9YF N/A GO:0008121 ... A0R052 38902248
    848735 8ovc:H (2.8) BS04 WUO N/A GO:0008121 ... A0R052 38902248
    848736 8ovc:H (2.8) BS05 MQ9 N/A GO:0008121 ... A0R052 38902248
    848737 8ovc:H (2.8) BS06 HEM N/A GO:0008121 ... A0R052 38902248
    848738 8ovc:H (2.8) BS07 MQ9 N/A GO:0008121 ... A0R052 38902248
    848739 8ovc:H (2.8) BS08 MQ9 N/A GO:0008121 ... A0R052 38902248
    848740 8ovc:H (2.8) BS09 HEM N/A GO:0008121 ... A0R052 38902248
    848741 8ovc:H (2.8) BS10 9XX N/A GO:0008121 ... A0R052 38902248
    848742 8ovc:H (2.8) BS11 9YF N/A GO:0008121 ... A0R052 38902248
    848743 8ovc:I (2.8) BS01 WUO N/A GO:0016020 ... A0QVH4 38902248
    848744 8ovc:J (2.8) BS01 peptide N/A GO:0004129 ... A0R049 38902248
    848745 8ovc:J (2.8) BS02 peptide N/A GO:0004129 ... A0R049 38902248
    848746 8ovc:K (2.8) BS01 peptide N/A GO:0004129 ... A0R056 38902248
    848747 8ovc:K (2.8) BS02 MQ9 N/A GO:0004129 ... A0R056 38902248
    848748 8ovc:L (2.8) BS01 HEA N/A GO:0004129 ... A0A2U9PNL2 38902248
    848749 8ovc:L (2.8) BS02 HEA N/A GO:0004129 ... A0A2U9PNL2 38902248
    848750 8ovc:L (2.8) BS03 CU N/A GO:0004129 ... A0A2U9PNL2 38902248
    848751 8ovc:L (2.8) BS04 CA N/A GO:0004129 ... A0A2U9PNL2 38902248
    848752 8ovc:L (2.8) BS05 9XX N/A GO:0004129 ... A0A2U9PNL2 38902248
    848753 8ovc:M (2.8) BS01 peptide N/A GO:0004497 ... A0R051 38902248
    848754 8ovc:M (2.8) BS02 FES N/A GO:0004497 ... A0R051 38902248
    848755 8ovc:M (2.8) BS03 9YF N/A GO:0004497 ... A0R051 38902248
    848756 8ovc:N (2.8) BS01 MQ9 N/A GO:0008121 ... A0R052 38902248
    848757 8ovc:N (2.8) BS02 MQ9 N/A GO:0008121 ... A0R052 38902248
    848758 8ovc:N (2.8) BS03 HEM N/A GO:0008121 ... A0R052 38902248
    848759 8ovc:N (2.8) BS04 MQ9 N/A GO:0008121 ... A0R052 38902248
    848760 8ovc:N (2.8) BS05 MQ9 N/A GO:0008121 ... A0R052 38902248
    848761 8ovc:N (2.8) BS06 HEM N/A GO:0008121 ... A0R052 38902248
    848762 8ovc:N (2.8) BS07 9YF N/A GO:0008121 ... A0R052 38902248
    848763 8ovc:O (2.8) BS01 HEC N/A GO:0005506 ... A0R050 38902248
    848764 8ovc:O (2.8) BS02 HEC N/A GO:0005506 ... A0R050 38902248
    848765 8ovc:O (2.8) BS03 MQ9 N/A GO:0005506 ... A0R050 38902248
    848766 8ovc:O (2.8) BS04 WUO N/A GO:0005506 ... A0R050 38902248
    848767 8ovc:O (2.8) BS05 MQ9 N/A GO:0005506 ... A0R050 38902248
    848768 8ovc:P (2.8) BS01 WUO N/A GO:0016020 ... A0QVH4 38902248
    848769 8ovc:Q (2.8) BS01 CU N/A GO:0004129 ... A0R057 38902248
    848770 8ovc:Q (2.8) BS02 CU N/A GO:0004129 ... A0R057 38902248
    848771 8ovc:R (2.8) BS01 HEA N/A GO:0004129 ... A0A2U9PNL2 38902248
    848772 8ovc:R (2.8) BS02 HEA N/A GO:0004129 ... A0A2U9PNL2 38902248
    848773 8ovc:R (2.8) BS03 CU N/A GO:0004129 ... A0A2U9PNL2 38902248
    848774 8ovc:R (2.8) BS04 CA N/A GO:0004129 ... A0A2U9PNL2 38902248
    848775 8ovc:S (2.8) BS01 peptide N/A GO:0004129 ... A0R049 38902248
    848776 8ovc:S (2.8) BS02 peptide N/A GO:0004129 ... A0R049 38902248
    848777 8ovc:T (2.8) BS01 peptide N/A GO:0004129 ... A0R056 38902248
    848778 8ovc:T (2.8) BS02 MQ9 N/A GO:0004129 ... A0R056 38902248
    848779 8ovc:W (2.8) BS01 WUO N/A N/A A0R562 38902248
    848780 8ovc:W (2.8) BS02 9YF N/A N/A A0R562 38902248
    848781 8ovc:X (2.8) BS01 CU N/A GO:0004129 ... A0R057 38902248
    848782 8ovc:X (2.8) BS02 CU N/A GO:0004129 ... A0R057 38902248
    848783 8ovc:b (2.8) BS01 WUO N/A N/A A0R562 38902248
    848784 8ovc:b (2.8) BS02 9YF N/A N/A A0R562 38902248
    848785 8ovd:C (2.3) BS01 HEC N/A GO:0005506 ... A0R050 38902248
    848786 8ovd:C (2.3) BS02 HEC N/A GO:0005506 ... A0R050 38902248
    848787 8ovd:C (2.3) BS03 MQ9 N/A GO:0005506 ... A0R050 38902248
    848788 8ovd:C (2.3) BS04 WUO N/A GO:0005506 ... A0R050 38902248
    848789 8ovd:C (2.3) BS05 MQ9 N/A GO:0005506 ... A0R050 38902248
    848790 8ovd:G (2.3) BS01 peptide N/A GO:0004497 ... A0R051 38902248
    848791 8ovd:G (2.3) BS02 9YF N/A GO:0004497 ... A0R051 38902248
    848792 8ovd:G (2.3) BS03 MQ9 N/A GO:0004497 ... A0R051 38902248
    848793 8ovd:G (2.3) BS04 FES N/A GO:0004497 ... A0R051 38902248
    848794 8ovd:G (2.3) BS05 IZL N/A GO:0004497 ... A0R051 38902248
    848795 8ovd:G (2.3) BS06 9YF N/A GO:0004497 ... A0R051 38902248
    848796 8ovd:G (2.3) BS07 MQ9 N/A GO:0004497 ... A0R051 38902248
    848797 8ovd:H (2.3) BS01 peptide N/A GO:0008121 ... A0R052 38902248
    848798 8ovd:H (2.3) BS02 9YF N/A GO:0008121 ... A0R052 38902248
    848799 8ovd:H (2.3) BS03 MQ9 N/A GO:0008121 ... A0R052 38902248
    848800 8ovd:H (2.3) BS04 MQ9 N/A GO:0008121 ... A0R052 38902248

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).