SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    848801 8ovd:H (2.3) BS05 WUO N/A GO:0008121 ... A0R052 38902248
    848802 8ovd:H (2.3) BS06 IZL N/A GO:0008121 ... A0R052 38902248
    848803 8ovd:H (2.3) BS07 HEM N/A GO:0008121 ... A0R052 38902248
    848804 8ovd:H (2.3) BS08 MQ9 N/A GO:0008121 ... A0R052 38902248
    848805 8ovd:H (2.3) BS09 MQ9 N/A GO:0008121 ... A0R052 38902248
    848806 8ovd:H (2.3) BS10 HEM N/A GO:0008121 ... A0R052 38902248
    848807 8ovd:H (2.3) BS11 MQ9 N/A GO:0008121 ... A0R052 38902248
    848808 8ovd:H (2.3) BS12 MQ9 N/A GO:0008121 ... A0R052 38902248
    848809 8ovd:H (2.3) BS13 9YF N/A GO:0008121 ... A0R052 38902248
    848810 8ovd:H (2.3) BS14 9XX N/A GO:0008121 ... A0R052 38902248
    848811 8ovd:I (2.3) BS01 WUO N/A GO:0016020 ... A0QVH4 38902248
    848812 8ovd:I (2.3) BS02 9YF N/A GO:0016020 ... A0QVH4 38902248
    848813 8ovd:K (2.3) BS01 MQ9 N/A GO:0004129 ... A0R056 38902248
    848814 8ovd:L (2.3) BS01 MQ9 N/A GO:0004129 ... A0A2U9PNL2 38902248
    848815 8ovd:L (2.3) BS02 HEA N/A GO:0004129 ... A0A2U9PNL2 38902248
    848816 8ovd:L (2.3) BS03 HEA N/A GO:0004129 ... A0A2U9PNL2 38902248
    848817 8ovd:L (2.3) BS04 CU N/A GO:0004129 ... A0A2U9PNL2 38902248
    848818 8ovd:L (2.3) BS05 CA N/A GO:0004129 ... A0A2U9PNL2 38902248
    848819 8ovd:M (2.3) BS01 peptide N/A GO:0004497 ... A0R051 38902248
    848820 8ovd:M (2.3) BS02 FES N/A GO:0004497 ... A0R051 38902248
    848821 8ovd:M (2.3) BS03 IZL N/A GO:0004497 ... A0R051 38902248
    848822 8ovd:M (2.3) BS04 9YF N/A GO:0004497 ... A0R051 38902248
    848823 8ovd:M (2.3) BS05 MQ9 N/A GO:0004497 ... A0R051 38902248
    848824 8ovd:M (2.3) BS06 MQ9 N/A GO:0004497 ... A0R051 38902248
    848825 8ovd:M (2.3) BS07 9YF N/A GO:0004497 ... A0R051 38902248
    848826 8ovd:N (2.3) BS01 peptide N/A GO:0008121 ... A0R052 38902248
    848827 8ovd:N (2.3) BS02 MQ9 N/A GO:0008121 ... A0R052 38902248
    848828 8ovd:N (2.3) BS03 IZL N/A GO:0008121 ... A0R052 38902248
    848829 8ovd:N (2.3) BS04 HEM N/A GO:0008121 ... A0R052 38902248
    848830 8ovd:N (2.3) BS05 MQ9 N/A GO:0008121 ... A0R052 38902248
    848831 8ovd:N (2.3) BS06 MQ9 N/A GO:0008121 ... A0R052 38902248
    848832 8ovd:N (2.3) BS07 HEM N/A GO:0008121 ... A0R052 38902248
    848833 8ovd:N (2.3) BS08 MQ9 N/A GO:0008121 ... A0R052 38902248
    848834 8ovd:N (2.3) BS09 MQ9 N/A GO:0008121 ... A0R052 38902248
    848835 8ovd:N (2.3) BS10 9YF N/A GO:0008121 ... A0R052 38902248
    848836 8ovd:N (2.3) BS11 9XX N/A GO:0008121 ... A0R052 38902248
    848837 8ovd:N (2.3) BS12 MQ9 N/A GO:0008121 ... A0R052 38902248
    848838 8ovd:N (2.3) BS13 9YF N/A GO:0008121 ... A0R052 38902248
    848839 8ovd:O (2.3) BS01 HEC N/A GO:0005506 ... A0R050 38902248
    848840 8ovd:O (2.3) BS02 HEC N/A GO:0005506 ... A0R050 38902248
    848841 8ovd:O (2.3) BS03 MQ9 N/A GO:0005506 ... A0R050 38902248
    848842 8ovd:O (2.3) BS04 WUO N/A GO:0005506 ... A0R050 38902248
    848843 8ovd:O (2.3) BS05 MQ9 N/A GO:0005506 ... A0R050 38902248
    848844 8ovd:P (2.3) BS01 WUO N/A GO:0016020 ... A0QVH4 38902248
    848845 8ovd:P (2.3) BS02 9YF N/A GO:0016020 ... A0QVH4 38902248
    848846 8ovd:Q (2.3) BS01 CU N/A GO:0004129 ... A0R057 38902248
    848847 8ovd:Q (2.3) BS02 CU N/A GO:0004129 ... A0R057 38902248
    848848 8ovd:R (2.3) BS01 MQ9 N/A GO:0004129 ... A0A2U9PNL2 38902248
    848849 8ovd:R (2.3) BS02 HEA N/A GO:0004129 ... A0A2U9PNL2 38902248
    848850 8ovd:R (2.3) BS03 HEA N/A GO:0004129 ... A0A2U9PNL2 38902248
    848851 8ovd:R (2.3) BS04 CU N/A GO:0004129 ... A0A2U9PNL2 38902248
    848852 8ovd:R (2.3) BS05 CA N/A GO:0004129 ... A0A2U9PNL2 38902248
    848853 8ovd:R (2.3) BS06 9XX N/A GO:0004129 ... A0A2U9PNL2 38902248
    848854 8ovd:T (2.3) BS01 WUO N/A GO:0004129 ... A0R056 38902248
    848855 8ovd:T (2.3) BS02 MQ9 N/A GO:0004129 ... A0R056 38902248
    848856 8ovd:W (2.3) BS01 HEC N/A N/A A0R562 38902248
    848857 8ovd:W (2.3) BS02 WUO N/A N/A A0R562 38902248
    848858 8ovd:W (2.3) BS03 9YF N/A N/A A0R562 38902248
    848859 8ovd:X (2.3) BS01 CU N/A GO:0004129 ... A0R057 38902248
    848860 8ovd:X (2.3) BS02 CU N/A GO:0004129 ... A0R057 38902248
    848861 8ovd:b (2.3) BS01 peptide N/A N/A A0R562 38902248
    848862 8ovd:b (2.3) BS02 HEC N/A N/A A0R562 38902248
    848863 8ovd:b (2.3) BS03 WUO N/A N/A A0R562 38902248
    848864 8ovd:b (2.3) BS04 9YF N/A N/A A0R562 38902248
    848865 8ove:A0 (2.6) BS01 rna ? GO:0003729 ... Q38BK6 37985661
    848866 8ove:A1 (2.6) BS01 rna ? GO:0003723 ... Q386F2 37985661
    848867 8ove:A2 (2.6) BS01 rna ? GO:0000028 ... Q385D9 37985661
    848868 8ove:A3 (2.6) BS01 rna ? GO:0001558 ... Q38CL9 37985661
    848869 8ove:A4 (2.6) BS01 rna ? GO:0003735 ... Q38FD9 37985661
    848870 8ove:A5 (2.6) BS01 rna ? GO:0000462 ... Q57YL6 37985661
    848871 8ove:A5 (2.6) BS02 rna ? GO:0000462 ... Q57YL6 37985661
    848872 8ove:A5 (2.6) BS03 MG ? GO:0000462 ... Q57YL6 37985661
    848873 8ove:A6 (2.6) BS01 rna ? GO:0003723 ... P17959 37985661
    848874 8ove:A7 (2.6) BS01 rna ? GO:0003729 ... P69103 37985661
    848875 8ove:A8 (2.6) BS01 rna N/A GO:0003735 ... N/A 37985661
    848876 8ove:AC (2.6) BS01 rna ? GO:0000028 ... Q383I8 37985661
    848877 8ove:AD (2.6) BS01 rna ? GO:0003723 ... Q38B66 37985661
    848878 8ove:AE (2.6) BS01 rna ? GO:0000314 ... Q38CI4 37985661
    848879 8ove:AG (2.6) BS01 rna ? GO:0003735 ... Q586C2 37985661
    848880 8ove:AH (2.6) BS01 rna ? GO:0003735 ... P19800 37985661
    848881 8ove:AI (2.6) BS01 rna ? GO:0000028 ... Q57XN7 37985661
    848882 8ove:AJ (2.6) BS01 rna ? GO:0000314 ... Q580K6 37985661
    848883 8ove:AK (2.6) BS01 rna ? GO:0000462 ... Q57VV0 37985661
    848884 8ove:AL (2.6) BS01 rna ? GO:0003735 ... Q382Z8 37985661
    848885 8ove:AM (2.6) BS01 rna ? GO:0000314 ... Q38B69 37985661
    848886 8ove:AO (2.6) BS01 rna ? GO:0000028 ... Q583K7 37985661
    848887 8ove:AP (2.6) BS01 rna ? GO:0003723 ... Q388D3 37985661
    848888 8ove:AQ (2.6) BS01 rna N/A GO:0003735 ... N/A 37985661
    848889 8ove:AS (2.6) BS01 rna ? GO:0003735 ... Q38CD1 37985661
    848890 8ove:AT (2.6) BS01 rna ? GO:0003735 ... Q38AM9 37985661
    848891 8ove:AU (2.6) BS01 rna ? GO:0003735 ... Q57XX0 37985661
    848892 8ove:AV (2.6) BS01 rna ? GO:0003729 ... Q384J9 37985661
    848893 8ove:AW (2.6) BS01 rna ? GO:0000028 ... Q383V7 37985661
    848894 8ove:AX (2.6) BS01 rna ? GO:0003723 ... Q38EW1 37985661
    848895 8ove:AY (2.6) BS01 rna ? GO:0003735 ... Q584U5 37985661
    848896 8ove:AZ (2.6) BS01 rna ? GO:0000028 ... Q57U30 37985661
    848897 8ove:Az (2.6) BS01 rna ? GO:0003676 ... Q382D5 37985661
    848898 8ove:BI (2.6) BS01 rna ? GO:0003723 ... P50885 37985661
    848899 8ove:BI (2.6) BS02 rna ? GO:0003723 ... P50885 37985661
    848900 8ove:BK (2.6) BS01 rna ? GO:0003735 ... Q38EC5 37985661
    848901 8ove:BK (2.6) BS02 rna ? GO:0003735 ... Q38EC5 37985661
    848902 8ove:BK (2.6) BS03 rna ? GO:0003735 ... Q38EC5 37985661
    848903 8ove:BL (2.6) BS01 rna ? GO:0003723 ... Q38EI9 37985661
    848904 8ove:BL (2.6) BS02 rna ? GO:0003723 ... Q38EI9 37985661
    848905 8ove:BN (2.6) BS01 rna ? GO:0003723 ... Q57V55 37985661
    848906 8ove:BN (2.6) BS02 rna ? GO:0003723 ... Q57V55 37985661
    848907 8ove:BN (2.6) BS03 rna ? GO:0003723 ... Q57V55 37985661
    848908 8ove:BO (2.6) BS01 rna ? GO:0003729 ... Q585J5 37985661
    848909 8ove:BO (2.6) BS02 rna ? GO:0003729 ... Q585J5 37985661
    848910 8ove:BO (2.6) BS03 rna ? GO:0003729 ... Q585J5 37985661
    848911 8ove:BO (2.6) BS04 rna ? GO:0003729 ... Q585J5 37985661
    848912 8ove:BP (2.6) BS01 rna ? GO:0003723 ... Q383F5 37985661
    848913 8ove:BP (2.6) BS02 rna ? GO:0003723 ... Q383F5 37985661
    848914 8ove:BP (2.6) BS03 rna ? GO:0003723 ... Q383F5 37985661
    848915 8ove:BQ (2.6) BS01 rna ? GO:0002181 ... Q38CY7 37985661
    848916 8ove:BQ (2.6) BS02 rna ? GO:0002181 ... Q38CY7 37985661
    848917 8ove:BQ (2.6) BS03 rna ? GO:0002181 ... Q38CY7 37985661
    848918 8ove:BR (2.6) BS01 rna ? GO:0002181 ... Q385T6 37985661
    848919 8ove:BR (2.6) BS02 rna ? GO:0002181 ... Q385T6 37985661
    848920 8ove:BR (2.6) BS03 rna ? GO:0002181 ... Q385T6 37985661
    848921 8ove:BR (2.6) BS04 rna ? GO:0002181 ... Q385T6 37985661
    848922 8ove:BR (2.6) BS05 rna ? GO:0002181 ... Q385T6 37985661
    848923 8ove:BS (2.6) BS01 rna ? GO:0002181 ... Q382C4 37985661
    848924 8ove:BS (2.6) BS02 rna ? GO:0002181 ... Q382C4 37985661
    848925 8ove:BS (2.6) BS03 rna ? GO:0002181 ... Q382C4 37985661
    848926 8ove:BT (2.6) BS01 rna ? GO:0003723 ... Q57ZI7 37985661
    848927 8ove:BT (2.6) BS02 rna ? GO:0003723 ... Q57ZI7 37985661
    848928 8ove:BT (2.6) BS03 rna ? GO:0003723 ... Q57ZI7 37985661
    848929 8ove:BT (2.6) BS04 rna ? GO:0003723 ... Q57ZI7 37985661
    848930 8ove:BT (2.6) BS05 rna ? GO:0003723 ... Q57ZI7 37985661
    848931 8ove:BU (2.6) BS01 rna ? GO:0003735 ... Q4FKD4 37985661
    848932 8ove:BU (2.6) BS02 rna ? GO:0003735 ... Q4FKD4 37985661
    848933 8ove:BU (2.6) BS03 rna ? GO:0003735 ... Q4FKD4 37985661
    848934 8ove:BV (2.6) BS01 rna ? GO:0002181 ... Q383R3 37985661
    848935 8ove:BV (2.6) BS02 rna ? GO:0002181 ... Q383R3 37985661
    848936 8ove:BV (2.6) BS03 rna ? GO:0002181 ... Q383R3 37985661
    848937 8ove:BW (2.6) BS01 rna ? GO:0003735 ... Q38DP2 37985661
    848938 8ove:BW (2.6) BS02 rna ? GO:0003735 ... Q38DP2 37985661
    848939 8ove:BX (2.6) BS01 rna ? GO:0003735 ... P41165 37985661
    848940 8ove:BX (2.6) BS02 rna ? GO:0003735 ... P41165 37985661
    848941 8ove:BX (2.6) BS03 rna ? GO:0003735 ... P41165 37985661
    848942 8ove:BY (2.6) BS01 rna ? GO:0002181 ... O77067 37985661
    848943 8ove:BY (2.6) BS02 rna ? GO:0002181 ... O77067 37985661
    848944 8ove:BZ (2.6) BS01 rna ? GO:0002181 ... Q38D25 37985661
    848945 8ove:BZ (2.6) BS02 rna ? GO:0002181 ... Q38D25 37985661
    848946 8ove:Ba (2.6) BS01 rna ? GO:0003735 ... Q381J6 37985661
    848947 8ove:Ba (2.6) BS02 rna ? GO:0003735 ... Q381J6 37985661
    848948 8ove:Bb (2.6) BS01 rna ? GO:0003735 ... Q38DN9 37985661
    848949 8ove:Bb (2.6) BS02 rna ? GO:0003735 ... Q38DN9 37985661
    848950 8ove:Bc (2.6) BS01 rna ? GO:0003729 ... Q385E9 37985661
    848951 8ove:Bd (2.6) BS01 rna ? GO:0002181 ... Q383S6 37985661
    848952 8ove:Bd (2.6) BS02 rna ? GO:0002181 ... Q383S6 37985661
    848953 8ove:Be (2.6) BS01 rna ? GO:0002181 ... Q57W56 37985661
    848954 8ove:Be (2.6) BS02 rna ? GO:0002181 ... Q57W56 37985661
    848955 8ove:Be (2.6) BS03 rna ? GO:0002181 ... Q57W56 37985661
    848956 8ove:Bf (2.6) BS01 rna ? GO:0003723 ... Q581Q1 37985661
    848957 8ove:Bf (2.6) BS02 rna ? GO:0003723 ... Q581Q1 37985661
    848958 8ove:Bf (2.6) BS03 rna ? GO:0003723 ... Q581Q1 37985661
    848959 8ove:Bf (2.6) BS04 rna ? GO:0003723 ... Q581Q1 37985661
    848960 8ove:Bg (2.6) BS01 rna ? GO:0003723 ... P49153 37985661
    848961 8ove:Bh (2.6) BS01 rna ? GO:0002181 ... Q38DH8 37985661
    848962 8ove:Bh (2.6) BS02 rna ? GO:0002181 ... Q38DH8 37985661
    848963 8ove:Bh (2.6) BS03 rna ? GO:0002181 ... Q38DH8 37985661
    848964 8ove:Bh (2.6) BS04 rna ? GO:0002181 ... Q38DH8 37985661
    848965 8ove:Bi (2.6) BS01 rna ? GO:0003735 ... Q38CL1 37985661
    848966 8ove:Bj (2.6) BS01 rna ? GO:0003735 ... Q383V6 37985661
    848967 8ove:Bj (2.6) BS02 rna ? GO:0003735 ... Q383V6 37985661
    848968 8ove:Bj (2.6) BS03 rna ? GO:0003735 ... Q383V6 37985661
    848969 8ove:Bk (2.6) BS01 rna ? GO:0000463 ... Q38FW8 37985661
    848970 8ove:Bk (2.6) BS02 rna ? GO:0000463 ... Q38FW8 37985661
    848971 8ove:Bl (2.6) BS01 rna ? GO:0002181 ... Q584G9 37985661
    848972 8ove:Bl (2.6) BS02 rna ? GO:0002181 ... Q584G9 37985661
    848973 8ove:Bl (2.6) BS03 rna ? GO:0002181 ... Q584G9 37985661
    848974 8ove:Bm (2.6) BS01 rna ? GO:0002181 ... Q38CY6 37985661
    848975 8ove:Bm (2.6) BS02 rna ? GO:0002181 ... Q38CY6 37985661
    848976 8ove:Bn (2.6) BS01 rna ? GO:0003723 ... Q386L1 37985661
    848977 8ove:Bn (2.6) BS02 rna ? GO:0003723 ... Q386L1 37985661
    848978 8ove:Bn (2.6) BS03 rna ? GO:0003723 ... Q386L1 37985661
    848979 8ove:Bo (2.6) BS01 rna ? GO:0003735 ... Q38AW9 37985661
    848980 8ove:Bo (2.6) BS02 rna ? GO:0003735 ... Q38AW9 37985661
    848981 8ove:Bo (2.6) BS03 rna ? GO:0003735 ... Q38AW9 37985661
    848982 8ove:Bp (2.6) BS01 rna ? GO:0003735 ... Q38FV6 37985661
    848983 8ove:Bp (2.6) BS02 rna ? GO:0003735 ... Q38FV6 37985661
    848984 8ove:Bp (2.6) BS03 rna ? GO:0003735 ... Q38FV6 37985661
    848985 8ove:Bq (2.6) BS01 rna ? GO:0003735 ... Q57UJ8 37985661
    848986 8ove:Bq (2.6) BS02 rna ? GO:0003735 ... Q57UJ8 37985661
    848987 8ove:Bq (2.6) BS03 rna ? GO:0003735 ... Q57UJ8 37985661
    848988 8ove:Br (2.6) BS01 rna ? GO:0003723 ... Q582N2 37985661
    848989 8ove:Br (2.6) BS02 rna ? GO:0003723 ... Q582N2 37985661
    848990 8ove:Br (2.6) BS03 rna ? GO:0003723 ... Q582N2 37985661
    848991 8ove:Bs (2.6) BS01 rna ? GO:0003735 ... P21899 37985661
    848992 8ove:Bt (2.6) BS01 rna ? GO:0003735 ... P17843 37985661
    848993 8ove:Bt (2.6) BS02 rna ? GO:0003735 ... P17843 37985661
    848994 8ove:Bt (2.6) BS03 rna ? GO:0003735 ... P17843 37985661
    848995 8ove:Bu (2.6) BS01 rna ? GO:0000027 ... Q38CY8 37985661
    848996 8ove:Bu (2.6) BS02 rna ? GO:0000027 ... Q38CY8 37985661
    848997 8ove:Bu (2.6) BS03 rna ? GO:0000027 ... Q38CY8 37985661
    848998 8ove:Bv (2.6) BS01 rna ? GO:0000315 ... Q389K1 37985661
    848999 8ove:Bv (2.6) BS02 rna ? GO:0000315 ... Q389K1 37985661
    849000 8ove:Bw (2.6) BS01 rna ? GO:0000463 ... Q57V35 37985661

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).