SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4238 4239 4240 4241 4242 4243 4244 4245 4246 4247 4248 4249 4250 4251 4252 4253 4254 4255 4256 4257 4258 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    849401 8ox1:F (2.7) BS02 dna ? GO:0000781 ... P62805 37624885
    849402 8ox1:G (2.7) BS01 dna ? GO:0000786 ... Q93077 37624885
    849403 8ox1:G (2.7) BS02 dna ? GO:0000786 ... Q93077 37624885
    849404 8ox1:H (2.7) BS01 dna ? GO:0000786 ... P62807 37624885
    849405 8ox1:H (2.7) BS02 dna ? GO:0000786 ... P62807 37624885
    849406 8ox1:L (2.7) BS01 dna ? GO:0000723 ... P54274 37624885
    849407 8ox1:L (2.7) BS02 dna ? GO:0000723 ... P54274 37624885
    849408 8ox1:M (2.7) BS01 dna ? GO:0000723 ... P54274 37624885
    849409 8ox1:M (2.7) BS02 dna ? GO:0000723 ... P54274 37624885
    849410 8ox3:A (1.05) BS01 BDP N/A N/A Q8BHC0 N/A
    849411 8ox3:A (1.05) BS02 BDP N/A N/A Q8BHC0 N/A
    849412 8ox3:A (1.05) BS03 BDP N/A N/A Q8BHC0 N/A
    849413 8ox4:A (3.4) BS01 ACP 7.6.2.1 GO:0000166 ... O43520 37980352
    849414 8ox4:A (3.4) BS02 MG 7.6.2.1 GO:0000166 ... O43520 37980352
    849415 8ox5:A (2.9) BS01 ADP 7.6.2.1 GO:0000166 ... O43520 37980352
    849416 8ox5:A (2.9) BS02 ALF 7.6.2.1 GO:0000166 ... O43520 37980352
    849417 8ox5:A (2.9) BS03 MG 7.6.2.1 GO:0000166 ... O43520 37980352
    849418 8ox6:A (2.39) BS01 MG 7.6.2.1 GO:0000166 ... O43520 37980352
    849419 8ox6:A (2.39) BS02 ALF 7.6.2.1 GO:0000166 ... O43520 37980352
    849420 8ox7:A (2.56) BS01 MG 7.6.2.1 GO:0000166 ... O43520 37980352
    849421 8ox7:A (2.56) BS02 IP9 7.6.2.1 GO:0000166 ... O43520 37980352
    849422 8ox8:A (2.98) BS01 MG 7.6.2.1 GO:0000166 ... O43520 37980352
    849423 8ox8:A (2.98) BS02 IP9 7.6.2.1 GO:0000166 ... O43520 37980352
    849424 8ox9:A (2.72) BS01 BEF 7.6.2.1 GO:0000166 ... O43520 37980352
    849425 8ox9:A (2.72) BS02 MG 7.6.2.1 GO:0000166 ... O43520 37980352
    849426 8ox9:A (2.72) BS03 IP9 7.6.2.1 GO:0000166 ... O43520 37980352
    849427 8oxa:A (2.76) BS01 VN4 7.6.2.1 GO:0000166 ... O43520 37980352
    849428 8oxa:A (2.76) BS02 MG 7.6.2.1 GO:0000166 ... O43520 37980352
    849429 8oxa:A (2.76) BS03 D39 7.6.2.1 GO:0000166 ... O43520 37980352
    849430 8oxb:A (2.99) BS01 VN4 7.6.2.1 GO:0000166 ... O43520 37980352
    849431 8oxb:A (2.99) BS02 MG 7.6.2.1 GO:0000166 ... O43520 37980352
    849432 8oxc:A (2.58) BS01 VN4 7.6.2.1 GO:0000166 ... O43520 37980352
    849433 8oxc:A (2.58) BS02 MG 7.6.2.1 GO:0000166 ... O43520 37980352
    849434 8oxc:A (2.58) BS03 PIE 7.6.2.1 GO:0000166 ... O43520 37980352
    849435 8oxd:A (1.32) BS01 BDP N/A N/A Q9Y5Y7 N/A
    849436 8oxd:A (1.32) BS02 BDP N/A N/A Q9Y5Y7 N/A
    849437 8oxe:A (2.26) BS01 ADP 2.7.1.134 GO:0000287 ... A4H2J0 38146842
    849438 8oxe:A (2.26) BS02 MG 2.7.1.134 GO:0000287 ... A4H2J0 38146842
    849439 8oxe:A (2.26) BS03 MG 2.7.1.134 GO:0000287 ... A4H2J0 38146842
    849440 8oxe:A (2.26) BS04 MG 2.7.1.134 GO:0000287 ... A4H2J0 38146842
    849441 8oxg:A (1.731) BS01 W5N 3.4.11.18 GO:0006508 ... P50579 38530115
    849442 8oxg:A (1.731) BS02 MN 3.4.11.18 GO:0006508 ... P50579 38530115
    849443 8oxg:A (1.731) BS03 MN 3.4.11.18 GO:0006508 ... P50579 38530115
    849444 8oxg:B (1.731) BS01 W5N 3.4.11.18 GO:0006508 ... P50579 38530115
    849445 8oxg:B (1.731) BS02 MN 3.4.11.18 GO:0006508 ... P50579 38530115
    849446 8oxg:B (1.731) BS03 MN 3.4.11.18 GO:0006508 ... P50579 38530115
    849447 8oxm:A (3.3) BS01 peptide 2.7.11.1 GO:0000077 ... Q13315 37756394
    849448 8oxm:A (3.3) BS02 ANP 2.7.11.1 GO:0000077 ... Q13315 37756394
    849449 8oxm:A (3.3) BS03 ZN 2.7.11.1 GO:0000077 ... Q13315 37756394
    849450 8oxm:B (3.3) BS01 peptide 2.7.11.1 GO:0000077 ... Q13315 37756394
    849451 8oxm:B (3.3) BS02 ANP 2.7.11.1 GO:0000077 ... Q13315 37756394
    849452 8oxm:B (3.3) BS03 ZN 2.7.11.1 GO:0000077 ... Q13315 37756394
    849453 8oxn:AAA (2.0) BS01 VFH 1.13.11.48 GO:0009056 ... O31266 37799987
    849454 8oxn:BBB (2.0) BS01 VFH 1.13.11.48 GO:0009056 ... O31266 37799987
    849455 8oxn:CCC (2.0) BS01 VFH 1.13.11.48 GO:0009056 ... O31266 37799987
    849456 8oxn:DDD (2.0) BS01 VFH 1.13.11.48 GO:0009056 ... O31266 37799987
    849457 8oxo:A (3.0) BS01 peptide 2.7.11.1 GO:0000077 ... Q13315 37756394
    849458 8oxo:A (3.0) BS02 ANP 2.7.11.1 GO:0000077 ... Q13315 37756394
    849459 8oxo:A (3.0) BS03 MG 2.7.11.1 GO:0000077 ... Q13315 37756394
    849460 8oxo:A (3.0) BS04 ZN 2.7.11.1 GO:0000077 ... Q13315 37756394
    849461 8oxo:B (3.0) BS01 peptide 2.7.11.1 GO:0000077 ... Q13315 37756394
    849462 8oxo:B (3.0) BS02 ANP 2.7.11.1 GO:0000077 ... Q13315 37756394
    849463 8oxo:B (3.0) BS03 MG 2.7.11.1 GO:0000077 ... Q13315 37756394
    849464 8oxo:B (3.0) BS04 ZN 2.7.11.1 GO:0000077 ... Q13315 37756394
    849465 8oxp:A (2.6) BS01 ANP 2.7.11.1 GO:0000077 ... Q13315 37756394
    849466 8oxp:A (2.6) BS02 MG 2.7.11.1 GO:0000077 ... Q13315 37756394
    849467 8oxp:A (2.6) BS03 ZN 2.7.11.1 GO:0000077 ... Q13315 37756394
    849468 8oxp:B (2.6) BS01 ANP 2.7.11.1 GO:0000077 ... Q13315 37756394
    849469 8oxp:B (2.6) BS02 MG 2.7.11.1 GO:0000077 ... Q13315 37756394
    849470 8oxp:B (2.6) BS03 ZN 2.7.11.1 GO:0000077 ... Q13315 37756394
    849471 8oxq:A (2.5) BS01 ANP 2.7.11.1 GO:0000077 ... Q13315 37756394
    849472 8oxq:A (2.5) BS02 MG 2.7.11.1 GO:0000077 ... Q13315 37756394
    849473 8oxq:A (2.5) BS03 ZN 2.7.11.1 GO:0000077 ... Q13315 37756394
    849474 8oxq:B (2.5) BS01 ANP 2.7.11.1 GO:0000077 ... Q13315 37756394
    849475 8oxq:B (2.5) BS02 MG 2.7.11.1 GO:0000077 ... Q13315 37756394
    849476 8oxq:B (2.5) BS03 ZN 2.7.11.1 GO:0000077 ... Q13315 37756394
    849477 8oxs:C (1.6) BS01 GLA N/A GO:0005515 ... P01556 N/A
    849478 8oxs:C (1.6) BS02 GAL N/A GO:0005515 ... P01556 N/A
    849479 8oxs:D (1.6) BS01 GLA N/A GO:0005515 ... P01556 N/A
    849480 8oxs:D (1.6) BS02 GAL N/A GO:0005515 ... P01556 N/A
    849481 8oxs:E (1.6) BS01 GLA N/A GO:0005515 ... P01556 N/A
    849482 8oxs:E (1.6) BS02 GAL N/A GO:0005515 ... P01556 N/A
    849483 8oxs:F (1.6) BS01 GAL N/A GO:0005515 ... P01556 N/A
    849484 8oxs:G (1.6) BS01 GAL N/A GO:0005515 ... P01556 N/A
    849485 8oxs:G (1.6) BS02 GLA N/A GO:0005515 ... P01556 N/A
    849486 8oxs:H (1.6) BS01 GAL N/A GO:0005515 ... P01556 N/A
    849487 8oxs:H (1.6) BS02 GLA N/A GO:0005515 ... P01556 N/A
    849488 8oxs:I (1.6) BS01 GAL N/A GO:0005515 ... P01556 N/A
    849489 8oxs:K (1.6) BS01 GLA N/A GO:0005515 ... P01556 N/A
    849490 8oxs:K (1.6) BS02 GAL N/A GO:0005515 ... P01556 N/A
    849491 8oxs:L (1.6) BS01 GLA N/A GO:0005515 ... P01556 N/A
    849492 8oxs:L (1.6) BS02 GAL N/A GO:0005515 ... P01556 N/A
    849493 8oxt:AAA (2.003) BS01 ZZ8 1.13.11.48 GO:0009056 ... O31266 37799987
    849494 8oxt:BBB (2.003) BS01 ZZ8 1.13.11.48 GO:0009056 ... O31266 37799987
    849495 8oxu:B (2.94) BS01 W5R ? GO:0005524 ... P02829 37509087
    849496 8oxu:C (2.94) BS01 W5R ? GO:0005524 ... P02829 37509087
    849497 8oxv:A (1.8) BS01 CA 2.3.2.13 GO:0003810 ... Q08188 37798283
    849498 8oxv:A (1.8) BS02 CA 2.3.2.13 GO:0003810 ... Q08188 37798283
    849499 8oxv:A (1.8) BS03 CA 2.3.2.13 GO:0003810 ... Q08188 37798283
    849500 8oxw:A (1.7) BS01 CA 2.3.2.13 GO:0003810 ... Q08188 37798283
    849501 8oxw:A (1.7) BS02 CA 2.3.2.13 GO:0003810 ... Q08188 37798283
    849502 8oxw:A (1.7) BS03 CA 2.3.2.13 GO:0003810 ... Q08188 37798283
    849503 8oxx:A (2.5) BS01 CA 2.3.2.13 GO:0018149 ... Q08188 37798283
    849504 8oxx:A (2.5) BS02 CA 2.3.2.13 GO:0018149 ... Q08188 37798283
    849505 8oxx:A (2.5) BS03 CA 2.3.2.13 GO:0018149 ... Q08188 37798283
    849506 8oxx:A (2.5) BS04 P6S 2.3.2.13 GO:0018149 ... Q08188 37798283
    849507 8oxx:A (2.5) BS05 ONL 2.3.2.13 GO:0018149 ... Q08188 37798283
    849508 8oxx:A (2.5) BS06 DVA 2.3.2.13 GO:0018149 ... Q08188 37798283
    849509 8oy1:A (3.34) BS01 GDP ? GO:0000139 ... P08754 39706421
    849510 8oy2:A (2.618) BS01 W5W 2.7.11.22 GO:0000082 ... P24941 37983497
    849511 8oy3:A (2.16) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849512 8oy3:A (2.16) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849513 8oy3:A (2.16) BS03 FDA 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849514 8oy3:B (2.16) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849515 8oy3:B (2.16) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849516 8oy3:B (2.16) BS03 FDA 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849517 8oy4:A (2.35) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849518 8oy4:A (2.35) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849519 8oy4:A (2.35) BS03 FDA 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849520 8oy4:B (2.35) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849521 8oy4:B (2.35) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849522 8oy4:B (2.35) BS03 FDA 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849523 8oy5:A (2.27) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849524 8oy5:A (2.27) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849525 8oy5:A (2.27) BS03 FDA 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849526 8oy5:B (2.27) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849527 8oy5:B (2.27) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849528 8oy5:B (2.27) BS03 FDA 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849529 8oy6:A (2.35) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849530 8oy6:A (2.35) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849531 8oy6:A (2.35) BS03 FDA 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849532 8oy6:B (2.35) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849533 8oy6:B (2.35) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849534 8oy6:B (2.35) BS03 FDA 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849535 8oy7:A (2.36) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849536 8oy7:A (2.36) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849537 8oy7:A (2.36) BS03 FDA 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849538 8oy7:B (2.36) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849539 8oy7:B (2.36) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849540 8oy7:B (2.36) BS03 FDA 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849541 8oy8:A (2.39) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849542 8oy8:A (2.39) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849543 8oy8:A (2.39) BS03 FDA 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849544 8oy8:B (2.39) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849545 8oy8:B (2.39) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849546 8oy8:B (2.39) BS03 FDA 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849547 8oy9:A (2.24) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849548 8oy9:A (2.24) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849549 8oy9:A (2.24) BS03 FDA 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849550 8oy9:B (2.24) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849551 8oy9:B (2.24) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849552 8oy9:B (2.24) BS03 FDA 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849553 8oya:A (2.18) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849554 8oya:A (2.18) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849555 8oya:A (2.18) BS03 FDA 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849556 8oya:B (2.18) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849557 8oya:B (2.18) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849558 8oya:B (2.18) BS03 FDA 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849559 8oyb:A (2.25) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849560 8oyb:A (2.25) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849561 8oyb:A (2.25) BS03 FDA 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849562 8oyb:B (2.25) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849563 8oyb:B (2.25) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849564 8oyb:B (2.25) BS03 FDA 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849565 8oyc:A (2.5) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849566 8oyc:A (2.5) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849567 8oyc:A (2.5) BS03 FDA 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849568 8oyc:B (2.5) BS01 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849569 8oyc:B (2.5) BS02 dna 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849570 8oyc:B (2.5) BS03 FDA 4.1.99.3 GO:0000166 ... Q8PYK9 38033070
    849571 8oyf:A (2.1) BS01 NA ? GO:0016020 ... Q9K0A9 37645971
    849572 8oyf:A (2.1) BS02 NA ? GO:0016020 ... Q9K0A9 37645971
    849573 8oyg:A (2.3) BS01 NA ? GO:0016020 ... Q9K0A9 37645971
    849574 8oyg:A (2.3) BS02 NA ? GO:0016020 ... Q9K0A9 37645971
    849575 8oyg:A (2.3) BS03 PAF ? GO:0016020 ... Q9K0A9 37645971
    849576 8oyh:A (1.8) BS01 peptide 3.4.21.75 GO:0004252 ... P09958 38385828
    849577 8oyh:A (1.8) BS02 CA 3.4.21.75 GO:0004252 ... P09958 38385828
    849578 8oyh:A (1.8) BS03 CA 3.4.21.75 GO:0004252 ... P09958 38385828
    849579 8oyh:A (1.8) BS04 CA 3.4.21.75 GO:0004252 ... P09958 38385828
    849580 8oyi:A (2.19) BS01 CU 1.14.18.3 N/A G1UBD1 38187819
    849581 8oyi:A (2.19) BS02 CU 1.14.18.3 N/A G1UBD1 38187819
    849582 8oyi:C (2.19) BS01 CU 1.14.13.25 GO:0004497 ... Q603F1 38187819
    849583 8oyi:C (2.19) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    849584 8oyi:C (2.19) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    849585 8oyi:C (2.19) BS04 ETF 1.14.13.25 GO:0004497 ... Q603F1 38187819
    849586 8oyi:E (2.19) BS01 CU 1.14.18.3 N/A G1UBD1 38187819
    849587 8oyi:E (2.19) BS02 CU 1.14.18.3 N/A G1UBD1 38187819
    849588 8oyi:G (2.19) BS01 CU 1.14.13.25 GO:0004497 ... Q603F1 38187819
    849589 8oyi:G (2.19) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    849590 8oyi:G (2.19) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    849591 8oyi:G (2.19) BS04 ETF 1.14.13.25 GO:0004497 ... Q603F1 38187819
    849592 8oyi:I (2.19) BS01 CU 1.14.18.3 N/A G1UBD1 38187819
    849593 8oyi:I (2.19) BS02 CU 1.14.18.3 N/A G1UBD1 38187819
    849594 8oyi:K (2.19) BS01 CU 1.14.13.25 GO:0004497 ... Q603F1 38187819
    849595 8oyi:K (2.19) BS02 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    849596 8oyi:K (2.19) BS03 HXG 1.14.13.25 GO:0004497 ... Q603F1 38187819
    849597 8oyi:K (2.19) BS04 ETF 1.14.13.25 GO:0004497 ... Q603F1 38187819
    849598 8oyk:A (1.9) BS01 peptide ? N/A Q15468 37834064
    849599 8oyk:B (1.9) BS01 peptide ? N/A Q15468 37834064
    849600 8oyk:B (1.9) BS02 peptide ? N/A Q15468 37834064

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).