SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    850601 8p2k:AG (2.9) BS01 rna ? GO:0002181 ... G1U7M4 37347872
    850602 8p2k:AG (2.9) BS02 ZN ? GO:0002181 ... G1U7M4 37347872
    850603 8p2k:AZ (2.9) BS01 rna ? GO:0000028 ... G1TLT8 37347872
    850604 8p2k:Aa (2.9) BS01 rna ? GO:0003735 ... G1SS70 37347872
    850605 8p2k:Ab (2.9) BS01 rna ? GO:0003723 ... O18789 37347872
    850606 8p2k:Ac (2.9) BS01 rna 4.2.99.18 GO:0003677 ... G1TNM3 37347872
    850607 8p2k:Ad (2.9) BS01 rna ? GO:0003723 ... G1TK17 37347872
    850608 8p2k:Ae (2.9) BS01 rna ? GO:0003723 ... G1TFM5 37347872
    850609 8p2k:Af (2.9) BS01 rna ? GO:0003735 ... G1TM55 37347872
    850610 8p2k:Ag (2.9) BS01 rna ? GO:0003735 ... G1SVB0 37347872
    850611 8p2k:Ah (2.9) BS01 rna ? GO:0003735 ... G1TJW1 37347872
    850612 8p2k:Ah (2.9) BS02 rna ? GO:0003735 ... G1TJW1 37347872
    850613 8p2k:Ai (2.9) BS01 rna ? GO:0003723 ... B7NZS8 37347872
    850614 8p2k:Aj (2.9) BS01 rna ? GO:0003723 ... G1TPV3 37347872
    850615 8p2k:Ak (2.9) BS01 rna ? GO:0003735 ... G1TRM4 37347872
    850616 8p2k:Al (2.9) BS01 rna ? GO:0003735 ... G1SFR8 37347872
    850617 8p2k:Am (2.9) BS01 rna ? GO:0003735 ... G1SP51 37347872
    850618 8p2k:Am (2.9) BS02 rna ? GO:0003735 ... G1SP51 37347872
    850619 8p2k:An (2.9) BS01 rna ? GO:0003735 ... G1T1F0 37347872
    850620 8p2k:Ao (2.9) BS01 rna ? GO:0000028 ... G1U0Q2 37347872
    850621 8p2k:Ao (2.9) BS02 rna ? GO:0000028 ... G1U0Q2 37347872
    850622 8p2k:Ap (2.9) BS01 rna ? GO:0000462 ... G1SGX4 37347872
    850623 8p2k:Aq (2.9) BS01 rna ? GO:0003735 ... G1TU13 37347872
    850624 8p2k:Ar (2.9) BS01 rna ? GO:0003676 ... G1TPG3 37347872
    850625 8p2k:As (2.9) BS01 rna ? GO:0000028 ... G1TN62 37347872
    850626 8p2k:At (2.9) BS01 rna ? GO:0003723 ... G1SIZ2 37347872
    850627 8p2k:Av (2.9) BS01 rna ? GO:0003735 ... G1TG89 37347872
    850628 8p2k:Aw (2.9) BS01 rna ? GO:0003735 ... G1SZ47 37347872
    850629 8p2k:Ax (2.9) BS01 rna ? GO:0003735 ... G1T3D8 37347872
    850630 8p2k:Ay (2.9) BS01 rna ? GO:0003735 ... G1TDB3 37347872
    850631 8p2k:Ay (2.9) BS02 rna ? GO:0003735 ... G1TDB3 37347872
    850632 8p2k:BA (2.9) BS01 rna ? GO:0002181 ... F2X241 37347872
    850633 8p2k:BA (2.9) BS02 rna ? GO:0002181 ... F2X241 37347872
    850634 8p2k:BB (2.9) BS01 rna ? GO:0003723 ... G1TL06 37347872
    850635 8p2k:BC (2.9) BS01 rna ? GO:0003735 ... G1SVW5 37347872
    850636 8p2k:BC (2.9) BS02 rna ? GO:0003735 ... G1SVW5 37347872
    850637 8p2k:BC (2.9) BS03 peptide ? GO:0003735 ... G1SVW5 37347872
    850638 8p2k:BD (2.9) BS01 rna ? GO:0000027 ... P19949 37347872
    850639 8p2k:BD (2.9) BS02 rna ? GO:0000027 ... P19949 37347872
    850640 8p2k:BD (2.9) BS03 GTP ? GO:0000027 ... P19949 37347872
    850641 8p2k:BD (2.9) BS04 AAC ? GO:0000027 ... P19949 37347872
    850642 8p2k:BE (2.9) BS01 rna ? GO:0000027 ... G1SKF7 37347872
    850643 8p2k:BF (2.9) BS01 rna ? GO:0000463 ... G1TUB1 37347872
    850644 8p2k:BF (2.9) BS02 rna ? GO:0000463 ... G1TUB1 37347872
    850645 8p2k:BG (2.9) BS01 rna ? GO:0000470 ... P62424 37347872
    850646 8p2k:BG (2.9) BS02 rna ? GO:0000470 ... P62424 37347872
    850647 8p2k:BH (2.9) BS01 rna ? GO:0002181 ... G1SWI6 37347872
    850648 8p2k:BI (2.9) BS01 rna ? GO:0003735 ... B7NZQ2 37347872
    850649 8p2k:BI (2.9) BS02 rna ? GO:0003735 ... B7NZQ2 37347872
    850650 8p2k:BI (2.9) BS03 rna ? GO:0003735 ... B7NZQ2 37347872
    850651 8p2k:BJ (2.9) BS01 rna ? GO:0003735 ... G1TUB8 37347872
    850652 8p2k:BJ (2.9) BS02 rna ? GO:0003735 ... G1TUB8 37347872
    850653 8p2k:BJ (2.9) BS03 rna ? GO:0003735 ... G1TUB8 37347872
    850654 8p2k:BL (2.9) BS01 rna ? GO:0003723 ... G1TKB3 37347872
    850655 8p2k:BL (2.9) BS02 rna ? GO:0003723 ... G1TKB3 37347872
    850656 8p2k:BM (2.9) BS01 rna ? GO:0003723 ... G1SZ12 37347872
    850657 8p2k:BN (2.9) BS01 rna ? GO:0002181 ... G1T0C1 37347872
    850658 8p2k:BN (2.9) BS02 rna ? GO:0002181 ... G1T0C1 37347872
    850659 8p2k:BO (2.9) BS01 rna ? GO:0003729 ... A0A0N8ETI8 37347872
    850660 8p2k:BP (2.9) BS01 rna ? GO:0002181 ... G1SCJ6 37347872
    850661 8p2k:BP (2.9) BS02 rna ? GO:0002181 ... G1SCJ6 37347872
    850662 8p2k:BP (2.9) BS03 peptide ? GO:0002181 ... G1SCJ6 37347872
    850663 8p2k:BQ (2.9) BS01 rna ? GO:0003723 ... F6QKI9 37347872
    850664 8p2k:BR (2.9) BS01 rna ? GO:0003723 ... G1TYL6 37347872
    850665 8p2k:BR (2.9) BS02 rna ? GO:0003723 ... G1TYL6 37347872
    850666 8p2k:BS (2.9) BS01 rna ? GO:0003735 ... A0A1Z5LHJ5 37347872
    850667 8p2k:BS (2.9) BS02 rna ? GO:0003735 ... A0A1Z5LHJ5 37347872
    850668 8p2k:BT (2.9) BS01 rna ? GO:0003735 ... G1SHQ2 37347872
    850669 8p2k:BT (2.9) BS02 rna ? GO:0003735 ... G1SHQ2 37347872
    850670 8p2k:BU (2.9) BS01 rna ? GO:0002181 ... G1TSG1 37347872
    850671 8p2k:BV (2.9) BS01 rna ? GO:0003735 ... G1T6D1 37347872
    850672 8p2k:BW (2.9) BS01 rna ? GO:0000027 ... G1SE28 37347872
    850673 8p2k:BW (2.9) BS02 rna ? GO:0000027 ... G1SE28 37347872
    850674 8p2k:BX (2.9) BS01 rna ? GO:0003735 ... G1SE76 37347872
    850675 8p2k:BX (2.9) BS02 rna ? GO:0003735 ... G1SE76 37347872
    850676 8p2k:BY (2.9) BS01 rna ? GO:0003723 ... G1SQH0 37347872
    850677 8p2k:BY (2.9) BS02 rna ? GO:0003723 ... G1SQH0 37347872
    850678 8p2k:BZ (2.9) BS01 rna ? GO:0003735 ... G1TXF6 37347872
    850679 8p2k:Ba (2.9) BS01 rna ? GO:0003735 ... G1SNY0 37347872
    850680 8p2k:Bb (2.9) BS01 rna ? GO:0002181 ... G1SGR6 37347872
    850681 8p2k:Bc (2.9) BS01 rna ? GO:0002181 ... G1TDL2 37347872
    850682 8p2k:Bc (2.9) BS02 rna ? GO:0002181 ... G1TDL2 37347872
    850683 8p2k:Bd (2.9) BS01 rna ? GO:0002181 ... G1SHG0 37347872
    850684 8p2k:Be (2.9) BS01 rna ? GO:0003735 ... G1TUN8 37347872
    850685 8p2k:Bf (2.9) BS01 rna ? GO:0000049 ... G1SF08 37347872
    850686 8p2k:Bg (2.9) BS01 rna ? GO:0003735 ... G1TXG5 37347872
    850687 8p2k:Bg (2.9) BS02 ZN ? GO:0003735 ... G1TXG5 37347872
    850688 8p2k:Bh (2.9) BS01 rna ? GO:0000463 ... G1SIT5 37347872
    850689 8p2k:Bh (2.9) BS02 rna ? GO:0000463 ... G1SIT5 37347872
    850690 8p2k:Bi (2.9) BS01 rna ? GO:0003735 ... G1TTQ5 37347872
    850691 8p2k:Bj (2.9) BS01 rna ? GO:0003723 ... U3KPD5 37347872
    850692 8p2k:Bj (2.9) BS02 rna ? GO:0003723 ... U3KPD5 37347872
    850693 8p2k:Bj (2.9) BS03 ZN ? GO:0003723 ... U3KPD5 37347872
    850694 8p2k:Bk (2.9) BS01 rna ? GO:0003735 ... G1U001 37347872
    850695 8p2k:Bl (2.9) BS01 rna ? GO:0003735 ... G1TTN1 37347872
    850696 8p2k:Bl (2.9) BS02 rna ? GO:0003735 ... G1TTN1 37347872
    850697 8p2k:Bl (2.9) BS03 peptide ? GO:0003735 ... G1TTN1 37347872
    850698 8p2k:Bm (2.9) BS01 rna ? GO:0003735 ... A0A2I3MBB6 37347872
    850699 8p2k:Bm (2.9) BS02 ZN ? GO:0003735 ... A0A2I3MBB6 37347872
    850700 8p2k:Bo (2.9) BS01 rna ? GO:0003735 ... G1T040 37347872
    850701 8p2k:Bo (2.9) BS02 rna ? GO:0003735 ... G1T040 37347872
    850702 8p2k:Bo (2.9) BS03 ZN ? GO:0003735 ... G1T040 37347872
    850703 8p2k:Bp (2.9) BS01 rna ? GO:0003735 ... G1SY53 37347872
    850704 8p2k:Bp (2.9) BS02 ZN ? GO:0003735 ... G1SY53 37347872
    850705 8p2k:Br (2.9) BS01 rna ? GO:0003735 ... G1U7L1 37347872
    850706 8p2k:Bs (2.9) BS01 rna ? GO:0000027 ... G1SPK4 37347872
    850707 8p2k:Bt (2.9) BS01 rna ? GO:0003723 ... G1SMR7 37347872
    850708 8p2k:Bv (2.9) BS01 rna ? GO:0003723 ... G1SKZ8 37347872
    850709 8p2k:Bv (2.9) BS02 N ? GO:0003723 ... G1SKZ8 37347872
    850710 8p2k:MA (2.9) BS01 rna 3.4.11.18 GO:0004177 ... P53582 37347872
    850711 8p2k:Na (2.9) BS01 rna ? GO:0000122 ... Q13765 37347872
    850712 8p2k:Nb (2.9) BS01 rna ? N/A A0A7I2YQL2 37347872
    850713 8p2l:A (2.68) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1
    Q86DA5
    37635352
    850714 8p2l:B (2.68) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1
    Q86DA5
    37635352
    850715 8p2l:C (2.68) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1
    Q86DA5
    37635352
    850716 8p2l:D (2.68) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1
    Q86DA5
    37635352
    850717 8p2l:E (2.68) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1
    Q86DA5
    37635352
    850718 8p2l:F (2.68) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1
    Q86DA5
    37635352
    850719 8p2l:G (2.68) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1
    Q86DA5
    37635352
    850720 8p2l:H (2.68) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1
    Q86DA5
    37635352
    850721 8p2q:A (1.69) BS01 WRT 3.2.1.17 GO:0003796 ... P00698 38738452
    850722 8p2r:A (1.25) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    850723 8p2r:A (1.25) BS02 4G7 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    850724 8p2s:A (2.4) BS01 TTP 1.17.4.2 GO:0004748 ... A0A3E4SF67 38968292
    850725 8p2s:A (2.4) BS02 MG 1.17.4.2 GO:0004748 ... A0A3E4SF67 38968292
    850726 8p2s:A (2.4) BS03 TTP 1.17.4.2 GO:0004748 ... A0A3E4SF67 38968292
    850727 8p2s:B (2.4) BS01 TTP 1.17.4.2 GO:0004748 ... A0A3E4SF67 38968292
    850728 8p2s:B (2.4) BS02 MG 1.17.4.2 GO:0004748 ... A0A3E4SF67 38968292
    850729 8p2s:B (2.4) BS03 TTP 1.17.4.2 GO:0004748 ... A0A3E4SF67 38968292
    850730 8p2s:B (2.4) BS04 GTP 1.17.4.2 GO:0004748 ... A0A3E4SF67 38968292
    850731 8p2s:B (2.4) BS05 ZN 1.17.4.2 GO:0004748 ... A0A3E4SF67 38968292
    850732 8p2u:A (1.4) BS01 SIW N/A N/A N/A N/A
    850733 8p2v:A (2.99) BS01 WKE ? GO:0007155 ... A0A9K2KM41 38499587
    850734 8p2w:C (3.76) BS01 peptide ? GO:0005298 ... Q9NP91 38951531
    850735 8p2x:A (3.59) BS01 MAN 3.4.17.-
    3.4.17.23
    GO:0001618 ... Q9BYF1 38951531
    850736 8p2x:A (3.59) BS02 ZN 3.4.17.-
    3.4.17.23
    GO:0001618 ... Q9BYF1 38951531
    850737 8p2x:B (3.59) BS01 MAN 3.4.17.-
    3.4.17.23
    GO:0001618 ... Q9BYF1 38951531
    850738 8p2x:B (3.59) BS02 ZN 3.4.17.-
    3.4.17.23
    GO:0001618 ... Q9BYF1 38951531
    850739 8p2y:A (3.46) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0001618 ... Q9BYF1 38951531
    850740 8p2y:B (3.46) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0001618 ... Q9BYF1 38951531
    850741 8p2z:C (3.5) BS01 peptide ? GO:0005298 ... Q9NP91 38951531
    850742 8p2z:C (3.5) BS02 YCP ? GO:0005298 ... Q9NP91 38951531
    850743 8p30:A (3.29) BS01 MAN 3.4.17.-
    3.4.17.23
    GO:0001618 ... Q9BYF1 38951531
    850744 8p30:A (3.29) BS02 ZN 3.4.17.-
    3.4.17.23
    GO:0001618 ... Q9BYF1 38951531
    850745 8p30:B (3.29) BS01 MAN 3.4.17.-
    3.4.17.23
    GO:0001618 ... Q9BYF1 38951531
    850746 8p30:B (3.29) BS02 ZN 3.4.17.-
    3.4.17.23
    GO:0001618 ... Q9BYF1 38951531
    850747 8p30:C (3.29) BS01 YCP ? GO:0005298 ... Q9NP91 38951531
    850748 8p30:D (3.29) BS01 YCP ? GO:0005298 ... Q9NP91 38951531
    850749 8p31:A (3.24) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0001618 ... Q9BYF1 38951531
    850750 8p31:B (3.24) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0001618 ... Q9BYF1 38951531
    850751 8p31:C (3.24) BS01 YCP ? GO:0005298 ... Q9NP91 38951531
    850752 8p31:D (3.24) BS01 YCP ? GO:0005298 ... Q9NP91 38951531
    850753 8p36:A (2.51) BS01 B6D ? GO:0007155 ... A0A9K2KM41 38499587
    850754 8p37:A (1.219) BS01 XMP ? GO:0000166 ... P73853 37875114
    850755 8p37:A (1.219) BS02 NAD ? GO:0000166 ... P73853 37875114
    850756 8p39:A (2.58) BS01 DGT 1.17.4.2 GO:0004748 ... A0A3E4SF67 38968292
    850757 8p39:A (2.58) BS02 DGT 1.17.4.2 GO:0004748 ... A0A3E4SF67 38968292
    850758 8p39:B (2.58) BS01 DGT 1.17.4.2 GO:0004748 ... A0A3E4SF67 38968292
    850759 8p39:B (2.58) BS02 DGT 1.17.4.2 GO:0004748 ... A0A3E4SF67 38968292
    850760 8p39:B (2.58) BS03 ATP 1.17.4.2 GO:0004748 ... A0A3E4SF67 38968292
    850761 8p39:B (2.58) BS04 ZN 1.17.4.2 GO:0004748 ... A0A3E4SF67 38968292
    850762 8p3a:A (-1.00) BS01 CA 3.4.24.- GO:0008233 ... Q6QGP7 37686055
    850763 8p3b:A (3.15) BS01 G3P ? GO:0007155 ... Q59621 38499587
    850764 8p3b:A (3.15) BS02 WKE ? GO:0007155 ... Q59621 38499587
    850765 8p3c:B (2.02) BS01 WRX 5.2.1.8 GO:0003755 ... Q63J95 N/A
    850766 8p3d:A (1.71) BS01 WS5 5.2.1.8 GO:0003755 ... Q09734 N/A
    850767 8p3e:B (1.75) BS01 WSI 2.4.1.-
    3.2.1.-
    3.2.1.45
    3.2.1.46
    GO:0000423 ... P04062 38381042
    850768 8p3g:A (2.13) BS01 GNP N/A N/A P51159
    Q9HCH5
    N/A
    850769 8p3g:A (2.13) BS02 WTU N/A N/A P51159
    Q9HCH5
    N/A
    850770 8p3g:A (2.13) BS03 MG N/A N/A P51159
    Q9HCH5
    N/A
    850771 8p3g:B (2.13) BS01 GNP N/A N/A P51159
    Q9HCH5
    N/A
    850772 8p3g:B (2.13) BS02 WTU N/A N/A P51159
    Q9HCH5
    N/A
    850773 8p3g:B (2.13) BS03 MG N/A N/A P51159
    Q9HCH5
    N/A
    850774 8p3h:A (2.76) BS01 GNP N/A N/A P51159
    Q9HCH5
    N/A
    850775 8p3h:A (2.76) BS02 WTO N/A N/A P51159
    Q9HCH5
    N/A
    850776 8p3h:A (2.76) BS03 MG N/A N/A P51159
    Q9HCH5
    N/A
    850777 8p3h:A (2.76) BS04 WTO N/A N/A P51159
    Q9HCH5
    N/A
    850778 8p3h:B (2.76) BS01 GNP N/A N/A P51159
    Q9HCH5
    N/A
    850779 8p3h:B (2.76) BS02 WTO N/A N/A P51159
    Q9HCH5
    N/A
    850780 8p3h:B (2.76) BS03 MG N/A N/A P51159
    Q9HCH5
    N/A
    850781 8p3i:A (2.0) BS01 GNP N/A N/A P51159
    Q9HCH5
    N/A
    850782 8p3i:A (2.0) BS02 WTK N/A N/A P51159
    Q9HCH5
    N/A
    850783 8p3i:A (2.0) BS03 MG N/A N/A P51159
    Q9HCH5
    N/A
    850784 8p3i:B (2.0) BS01 GNP N/A N/A P51159
    Q9HCH5
    N/A
    850785 8p3i:B (2.0) BS02 WTK N/A N/A P51159
    Q9HCH5
    N/A
    850786 8p3i:B (2.0) BS03 MG N/A N/A P51159
    Q9HCH5
    N/A
    850787 8p3j:A (2.16) BS01 WT6 N/A N/A P51159
    Q9HCH5
    N/A
    850788 8p3j:A (2.16) BS02 WT6 N/A N/A P51159
    Q9HCH5
    N/A
    850789 8p3j:A (2.16) BS03 GNP N/A N/A P51159
    Q9HCH5
    N/A
    850790 8p3j:A (2.16) BS04 MG N/A N/A P51159
    Q9HCH5
    N/A
    850791 8p3j:B (2.16) BS01 WT6 N/A N/A P51159
    Q9HCH5
    N/A
    850792 8p3j:B (2.16) BS02 GNP N/A N/A P51159
    Q9HCH5
    N/A
    850793 8p3j:B (2.16) BS03 WT6 N/A N/A P51159
    Q9HCH5
    N/A
    850794 8p3j:B (2.16) BS04 MG N/A N/A P51159
    Q9HCH5
    N/A
    850795 8p3k:A (2.58) BS01 GNP N/A N/A P51159
    Q9HCH5
    N/A
    850796 8p3k:A (2.58) BS02 WTB N/A N/A P51159
    Q9HCH5
    N/A
    850797 8p3k:A (2.58) BS03 MG N/A N/A P51159
    Q9HCH5
    N/A
    850798 8p3k:B (2.58) BS01 WTB N/A N/A P51159
    Q9HCH5
    N/A
    850799 8p3k:B (2.58) BS02 GNP N/A N/A P51159
    Q9HCH5
    N/A
    850800 8p3k:B (2.58) BS03 MG N/A N/A P51159
    Q9HCH5
    N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).