SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    850801 8oll:M (2.7) BS01 VSZ 3.4.21.92 GO:0004176 ... Q2G036 38029352
    850802 8oll:N (2.7) BS01 VSZ 3.4.21.92 GO:0004176 ... Q2G036 38029352
    850803 8oll:O (2.7) BS01 VSZ 3.4.21.92 GO:0004176 ... Q2G036 38029352
    850804 8oll:P (2.7) BS01 VSZ 3.4.21.92 GO:0004176 ... Q2G036 38029352
    850805 8oll:Q (2.7) BS01 VSZ 3.4.21.92 GO:0004176 ... Q2G036 38029352
    850806 8oll:R (2.7) BS01 VSZ 3.4.21.92 GO:0004176 ... Q2G036 38029352
    850807 8oll:S (2.7) BS01 VSZ 3.4.21.92 GO:0004176 ... Q2G036 38029352
    850808 8oll:T (2.7) BS01 VSZ 3.4.21.92 GO:0004176 ... Q2G036 38029352
    850809 8oll:U (2.7) BS01 VSZ 3.4.21.92 GO:0004176 ... Q2G036 38029352
    850810 8oll:V (2.7) BS01 VSZ 3.4.21.92 GO:0004176 ... Q2G036 38029352
    850811 8oll:W (2.7) BS01 VSZ 3.4.21.92 GO:0004176 ... Q2G036 38029352
    850812 8oll:X (2.7) BS01 VSZ 3.4.21.92 GO:0004176 ... Q2G036 38029352
    850813 8oll:Y (2.7) BS01 VSZ 3.4.21.92 GO:0004176 ... Q2G036 38029352
    850814 8oll:Z (2.7) BS01 VSZ 3.4.21.92 GO:0004176 ... Q2G036 38029352
    850815 8oll:a (2.7) BS01 VSZ 3.4.21.92 GO:0004176 ... Q2G036 38029352
    850816 8oll:b (2.7) BS01 VSZ 3.4.21.92 GO:0004176 ... Q2G036 38029352
    850817 8olm:A (1.5) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 N/A
    850818 8olm:A (1.5) BS02 VSM 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 N/A
    850819 8olp:A (1.27) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004325 ... A0A7U9DT46 38020392
    850820 8olp:B (1.27) BS01 HEM 1.11.1.-
    4.98.1.1
    GO:0004325 ... A0A7U9DT46 38020392
    850821 8olr:G (2.8) BS01 MG ? GO:0003674 ... P21243 38029352
    850822 8olr:H (2.8) BS01 VSZ 3.4.25.1 GO:0004298 ... P25043 38029352
    850823 8olr:I (2.8) BS01 MG ? GO:0005515 ... P25451 38029352
    850824 8olr:K (2.8) BS01 MG 3.4.25.1 GO:0004298 ... P30656 38029352
    850825 8olr:K (2.8) BS02 VSZ 3.4.25.1 GO:0004298 ... P30656 38029352
    850826 8olr:N (2.8) BS01 MG 3.4.25.1 GO:0004175 ... P38624 38029352
    850827 8olr:N (2.8) BS02 VSZ 3.4.25.1 GO:0004175 ... P38624 38029352
    850828 8olr:V (2.8) BS01 VSZ 3.4.25.1 GO:0004298 ... P25043 38029352
    850829 8olr:W (2.8) BS01 MG ? GO:0005515 ... P25451 38029352
    850830 8olr:Y (2.8) BS01 MG 3.4.25.1 GO:0004298 ... P30656 38029352
    850831 8olr:Y (2.8) BS02 VSZ 3.4.25.1 GO:0004298 ... P30656 38029352
    850832 8olr:Z (2.8) BS01 MG ? GO:0003674 ... P23724 38029352
    850833 8olr:b (2.8) BS01 VSZ 3.4.25.1 GO:0004175 ... P38624 38029352
    850834 8olt:B (2.84) BS01 SF4 7.1.1.2 GO:0002020 ... Q9DC70 37531432
    850835 8olt:B (2.84) BS02 HQH 7.1.1.2 GO:0002020 ... Q9DC70 37531432
    850836 8olt:D (2.84) BS01 SF4 7.1.1.2 GO:0003954 ... Q91WD5 37531432
    850837 8olt:E (2.84) BS01 FES 7.1.1.2 GO:0003954 ... Q9D6J6 37531432
    850838 8olt:F (2.84) BS01 SF4 7.1.1.2 GO:0005515 ... Q91YT0 37531432
    850839 8olt:F (2.84) BS02 FMN 7.1.1.2 GO:0005515 ... Q91YT0 37531432
    850840 8olt:G (2.84) BS01 SF4 7.1.1.2 GO:0005515 ... Q91VD9 37531432
    850841 8olt:G (2.84) BS02 SF4 7.1.1.2 GO:0005515 ... Q91VD9 37531432
    850842 8olt:G (2.84) BS03 FES 7.1.1.2 GO:0005515 ... Q91VD9 37531432
    850843 8olt:I (2.84) BS01 SF4 7.1.1.2 GO:0003954 ... Q8K3J1 37531432
    850844 8olt:I (2.84) BS02 SF4 7.1.1.2 GO:0003954 ... Q8K3J1 37531432
    850845 8olt:O (2.84) BS01 GTP ? GO:0005737 ... Q99LC3 37531432
    850846 8olt:P (2.84) BS01 NDP ? GO:0003954 ... Q9DC69 37531432
    850847 8olt:R (2.84) BS01 ZN ? GO:0001822 ... P52503 37531432
    850848 8olt:T (2.84) BS01 EHZ ? GO:0000035 ... Q9CR21 37531432
    850849 8olt:W (2.84) BS01 EHZ ? GO:0003674 ... Q9CQZ5 37531432
    850850 8olt:n (2.84) BS01 EHZ ? GO:0005739 ... Q9CQJ8 37531432
    850851 8olu:K (2.59) BS01 VYW ? GO:0005634 ... A0A640KTY7 37506194
    850852 8olu:L (2.59) BS01 VYW 3.4.25.1 GO:0000502 ... A0A640KW57 37506194
    850853 8olu:Y (2.59) BS01 VYW ? GO:0005634 ... A0A640KTY7 37506194
    850854 8olu:Z (2.59) BS01 VYW 3.4.25.1 GO:0000502 ... A0A640KW57 37506194
    850855 8olx:A (3.1) BS01 dna ? GO:0000287 ... P43246 N/A
    850856 8olx:A (3.1) BS02 dna ? GO:0000287 ... P43246 N/A
    850857 8olx:A (3.1) BS03 ADP ? GO:0000287 ... P43246 N/A
    850858 8olx:B (3.1) BS01 dna ? GO:0003690 ... P20585 N/A
    850859 8olx:B (3.1) BS02 dna ? GO:0003690 ... P20585 N/A
    850860 8om1:B (2.39) BS01 SF4 7.1.1.2 GO:0002020 ... Q9DC70 37531432
    850861 8om1:D (2.39) BS01 SF4 7.1.1.2 GO:0003954 ... Q91WD5 37531432
    850862 8om1:E (2.39) BS01 FES 7.1.1.2 GO:0003954 ... Q9D6J6 37531432
    850863 8om1:F (2.39) BS01 SF4 7.1.1.2 GO:0005515 ... Q91YT0 37531432
    850864 8om1:F (2.39) BS02 FMN 7.1.1.2 GO:0005515 ... Q91YT0 37531432
    850865 8om1:G (2.39) BS01 SF4 7.1.1.2 GO:0005515 ... Q91VD9 37531432
    850866 8om1:G (2.39) BS02 SF4 7.1.1.2 GO:0005515 ... Q91VD9 37531432
    850867 8om1:G (2.39) BS03 FES 7.1.1.2 GO:0005515 ... Q91VD9 37531432
    850868 8om1:I (2.39) BS01 SF4 7.1.1.2 GO:0003954 ... Q8K3J1 37531432
    850869 8om1:I (2.39) BS02 SF4 7.1.1.2 GO:0003954 ... Q8K3J1 37531432
    850870 8om1:O (2.39) BS01 DGT ? GO:0005737 ... Q99LC3 37531432
    850871 8om1:P (2.39) BS01 NDP ? GO:0003954 ... Q9DC69 37531432
    850872 8om1:R (2.39) BS01 ZN ? GO:0001822 ... P52503 37531432
    850873 8om1:U (2.39) BS01 EHZ ? GO:0000035 ... Q9CR21 37531432
    850874 8om1:W (2.39) BS01 EHZ ? GO:0003674 ... Q9CQZ5 37531432
    850875 8om1:n (2.39) BS01 EHZ ? GO:0005739 ... Q9CQJ8 37531432
    850876 8om2:1 (2.57) BS01 rna ? GO:0003735 ... P32344 38199006
    850877 8om2:2 (2.57) BS01 rna ? GO:0003735 ... P38783 38199006
    850878 8om2:3 (2.57) BS01 rna ? GO:0003735 ... P47141 38199006
    850879 8om2:5 (2.57) BS01 rna ? GO:0003735 ... P12686 38199006
    850880 8om2:6 (2.57) BS01 rna ? GO:0003735 ... P53292 38199006
    850881 8om2:A (2.57) BS01 rna ? GO:0003735 ... Q02950 38199006
    850882 8om2:B (2.57) BS01 rna ? GO:0003735 ... P32902 38199006
    850883 8om2:B (2.57) BS02 MG ? GO:0003735 ... P32902 38199006
    850884 8om2:C (2.57) BS01 rna ? GO:0003735 ... P02381 38199006
    850885 8om2:D (2.57) BS01 rna ? GO:0003723 ... P27929 38199006
    850886 8om2:E (2.57) BS01 rna ? GO:0003723 ... P33759 38199006
    850887 8om2:F (2.57) BS01 rna ? GO:0003735 ... P28778 38199006
    850888 8om2:G (2.57) BS01 rna ? GO:0003723 ... P47150 38199006
    850889 8om2:H (2.57) BS01 rna ? GO:0003735 ... Q03799 38199006
    850890 8om2:I (2.57) BS01 rna ? GO:0003723 ... P38120 38199006
    850891 8om2:J (2.57) BS01 rna ? GO:0003735 ... Q03201 38199006
    850892 8om2:K (2.57) BS01 rna ? GO:0003735 ... P42847 38199006
    850893 8om2:L (2.57) BS01 rna ? GO:0003735 ... P53732 38199006
    850894 8om2:M (2.57) BS01 rna ? GO:0003676 ... P53937 38199006
    850895 8om2:N (2.57) BS01 rna ? GO:0003735 ... P10663 38199006
    850896 8om2:O (2.57) BS01 rna ? GO:0003735 ... P21771 38199006
    850897 8om2:P (2.57) BS01 rna ? GO:0003735 ... Q02608 38199006
    850898 8om2:Q (2.57) BS01 rna ? GO:0003735 ... Q03246 38199006
    850899 8om2:R (2.57) BS01 rna ? GO:0003735 ... P40033 38199006
    850900 8om2:S (2.57) BS01 rna ? GO:0003723 ... P53733 38199006
    850901 8om2:T (2.57) BS01 rna ? GO:0003735 ... P38175 38199006
    850902 8om2:U (2.57) BS01 rna ? GO:0003735 ... P40496 38199006
    850903 8om2:V (2.57) BS01 rna ? GO:0003735 ... P17558 38199006
    850904 8om2:W (2.57) BS01 rna ? GO:0003735 ... Q01163 38199006
    850905 8om2:W (2.57) BS02 ATP ? GO:0003735 ... Q01163 38199006
    850906 8om2:X (2.57) BS01 rna ? GO:0003735 ... P53305 38199006
    850907 8om2:Y (2.57) BS01 rna ? GO:0003735 ... Q03976 38199006
    850908 8om2:Z (2.57) BS01 rna ? GO:0003735 ... O75012 38199006
    850909 8om2:c (2.57) BS01 rna 2.1.1.- GO:0003735 ... P36056 38199006
    850910 8om2:c (2.57) BS02 SF4 2.1.1.- GO:0003735 ... P36056 38199006
    850911 8om3:1 (2.87) BS01 rna ? GO:0003735 ... P32344 38199006
    850912 8om3:2 (2.87) BS01 rna ? GO:0003735 ... P38783 38199006
    850913 8om3:3 (2.87) BS01 rna ? GO:0003735 ... P47141 38199006
    850914 8om3:5 (2.87) BS01 rna ? GO:0003735 ... P12686 38199006
    850915 8om3:6 (2.87) BS01 rna ? GO:0003735 ... P53292 38199006
    850916 8om3:A (2.87) BS01 rna ? GO:0003735 ... Q02950 38199006
    850917 8om3:B (2.87) BS01 rna ? GO:0003735 ... P32902 38199006
    850918 8om3:B (2.87) BS02 MG ? GO:0003735 ... P32902 38199006
    850919 8om3:C (2.87) BS01 rna ? GO:0003735 ... P02381 38199006
    850920 8om3:D (2.87) BS01 rna ? GO:0003723 ... P27929 38199006
    850921 8om3:E (2.87) BS01 rna ? GO:0003723 ... P33759 38199006
    850922 8om3:F (2.87) BS01 rna ? GO:0003735 ... P28778 38199006
    850923 8om3:G (2.87) BS01 rna ? GO:0003723 ... P47150 38199006
    850924 8om3:H (2.87) BS01 rna ? GO:0003735 ... Q03799 38199006
    850925 8om3:I (2.87) BS01 rna ? GO:0003723 ... P38120 38199006
    850926 8om3:J (2.87) BS01 rna ? GO:0003735 ... Q03201 38199006
    850927 8om3:K (2.87) BS01 rna ? GO:0003735 ... P42847 38199006
    850928 8om3:L (2.87) BS01 rna ? GO:0003735 ... P53732 38199006
    850929 8om3:M (2.87) BS01 rna ? GO:0003676 ... P53937 38199006
    850930 8om3:N (2.87) BS01 rna ? GO:0003735 ... P10663 38199006
    850931 8om3:O (2.87) BS01 rna ? GO:0003735 ... P21771 38199006
    850932 8om3:P (2.87) BS01 rna ? GO:0003735 ... Q02608 38199006
    850933 8om3:Q (2.87) BS01 rna ? GO:0003735 ... Q03246 38199006
    850934 8om3:R (2.87) BS01 rna ? GO:0003735 ... P40033 38199006
    850935 8om3:S (2.87) BS01 rna ? GO:0003723 ... P53733 38199006
    850936 8om3:T (2.87) BS01 rna ? GO:0003735 ... P38175 38199006
    850937 8om3:U (2.87) BS01 rna ? GO:0003735 ... P40496 38199006
    850938 8om3:V (2.87) BS01 rna ? GO:0003735 ... P17558 38199006
    850939 8om3:W (2.87) BS01 rna ? GO:0003735 ... Q01163 38199006
    850940 8om3:W (2.87) BS02 ATP ? GO:0003735 ... Q01163 38199006
    850941 8om3:X (2.87) BS01 rna ? GO:0003735 ... P53305 38199006
    850942 8om3:Y (2.87) BS01 rna ? GO:0003735 ... Q03976 38199006
    850943 8om3:Z (2.87) BS01 rna ? GO:0003735 ... O75012 38199006
    850944 8om3:d (2.87) BS01 rna ? GO:0003743 ... P47015 38199006
    850945 8om4:1 (2.32) BS01 rna ? GO:0003735 ... P32344 38199006
    850946 8om4:2 (2.32) BS01 rna ? GO:0003735 ... P38783 38199006
    850947 8om4:3 (2.32) BS01 rna ? GO:0003735 ... P47141 38199006
    850948 8om4:5 (2.32) BS01 rna ? GO:0003735 ... P12686 38199006
    850949 8om4:6 (2.32) BS01 rna ? GO:0003735 ... P53292 38199006
    850950 8om4:A (2.32) BS01 rna ? GO:0003735 ... Q02950 38199006
    850951 8om4:B (2.32) BS01 rna ? GO:0003735 ... P32902 38199006
    850952 8om4:B (2.32) BS02 MG ? GO:0003735 ... P32902 38199006
    850953 8om4:C (2.32) BS01 rna ? GO:0003735 ... P02381 38199006
    850954 8om4:D (2.32) BS01 rna ? GO:0003723 ... P27929 38199006
    850955 8om4:E (2.32) BS01 rna ? GO:0003723 ... P33759 38199006
    850956 8om4:F (2.32) BS01 rna ? GO:0003735 ... P28778 38199006
    850957 8om4:G (2.32) BS01 rna ? GO:0003723 ... P47150 38199006
    850958 8om4:H (2.32) BS01 rna ? GO:0003735 ... Q03799 38199006
    850959 8om4:I (2.32) BS01 rna ? GO:0003723 ... P38120 38199006
    850960 8om4:J (2.32) BS01 rna ? GO:0003735 ... Q03201 38199006
    850961 8om4:K (2.32) BS01 rna ? GO:0003735 ... P42847 38199006
    850962 8om4:L (2.32) BS01 rna ? GO:0003735 ... P53732 38199006
    850963 8om4:M (2.32) BS01 rna ? GO:0003676 ... P53937 38199006
    850964 8om4:N (2.32) BS01 rna ? GO:0003735 ... P10663 38199006
    850965 8om4:O (2.32) BS01 rna ? GO:0003735 ... P21771 38199006
    850966 8om4:P (2.32) BS01 rna ? GO:0003735 ... Q02608 38199006
    850967 8om4:Q (2.32) BS01 rna ? GO:0003735 ... Q03246 38199006
    850968 8om4:R (2.32) BS01 rna ? GO:0003735 ... P40033 38199006
    850969 8om4:S (2.32) BS01 rna ? GO:0003723 ... P53733 38199006
    850970 8om4:T (2.32) BS01 rna ? GO:0003735 ... P38175 38199006
    850971 8om4:U (2.32) BS01 rna ? GO:0003735 ... P40496 38199006
    850972 8om4:V (2.32) BS01 rna ? GO:0003735 ... P17558 38199006
    850973 8om4:W (2.32) BS01 rna ? GO:0003735 ... Q01163 38199006
    850974 8om4:W (2.32) BS02 ATP ? GO:0003735 ... Q01163 38199006
    850975 8om4:X (2.32) BS01 rna ? GO:0003735 ... P53305 38199006
    850976 8om4:Y (2.32) BS01 rna ? GO:0003735 ... Q03976 38199006
    850977 8om4:Z (2.32) BS01 rna ? GO:0003735 ... O75012 38199006
    850978 8om5:A (3.52) BS01 ADP ? GO:0000287 ... P43246 N/A
    850979 8om5:A (3.52) BS02 MG ? GO:0000287 ... P43246 N/A
    850980 8om5:B (3.52) BS01 ADP ? GO:0003690 ... P20585 N/A
    850981 8om5:B (3.52) BS02 MG ? GO:0003690 ... P20585 N/A
    850982 8om7:A (3.74) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 38688959
    850983 8om7:B (3.74) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 38688959
    850984 8om7:C (3.74) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 38688959
    850985 8om7:D (3.74) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 38688959
    850986 8om7:E (3.74) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 38688959
    850987 8om7:F (3.74) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 38688959
    850988 8om8:AAA (1.08) BS01 VSU 3.2.1.17 GO:0003796 ... P00698 37195003
    850989 8om8:AAA (1.08) BS02 VTZ 3.2.1.17 GO:0003796 ... P00698 37195003
    850990 8om9:A (3.32) BS01 ADP ? GO:0000287 ... P43246 N/A
    850991 8om9:B (3.32) BS01 dna ? GO:0003690 ... P20585 N/A
    850992 8om9:B (3.32) BS02 dna ? GO:0003690 ... P20585 N/A
    850993 8om9:B (3.32) BS03 ADP ? GO:0003690 ... P20585 N/A
    850994 8oma:A (3.29) BS01 dna ? GO:0000287 ... P43246 N/A
    850995 8oma:A (3.29) BS02 dna ? GO:0000287 ... P43246 N/A
    850996 8oma:A (3.29) BS03 ATP ? GO:0000287 ... P43246 N/A
    850997 8oma:A (3.29) BS04 ATP ? GO:0000287 ... P43246 N/A
    850998 8oma:B (3.29) BS01 ATP ? GO:0003690 ... P20585 N/A
    850999 8oma:B (3.29) BS02 ATP ? GO:0003690 ... P20585 N/A
    851000 8oma:B (3.29) BS03 MG ? GO:0003690 ... P20585 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).