SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    850801 8p3l:A (1.8) BS01 CU ? N/A W0DP94 N/A
    850802 8p3l:A (1.8) BS02 CU ? N/A W0DP94 N/A
    850803 8p3l:D (1.8) BS01 CU ? N/A W0DP94 N/A
    850804 8p3l:D (1.8) BS02 CU ? N/A W0DP94 N/A
    850805 8p3l:G (1.8) BS01 CU ? N/A W0DP94 N/A
    850806 8p3l:G (1.8) BS02 CU ? N/A W0DP94 N/A
    850807 8p3l:J (1.8) BS01 CU ? N/A W0DP94 N/A
    850808 8p3l:J (1.8) BS02 CU ? N/A W0DP94 N/A
    850809 8p3m:2 (2.07) BS01 CU ? N/A W0DP94 N/A
    850810 8p3m:2 (2.07) BS02 CU ? N/A W0DP94 N/A
    850811 8p3m:5 (2.07) BS01 CU ? N/A W0DP94 N/A
    850812 8p3m:5 (2.07) BS02 CU ? N/A W0DP94 N/A
    850813 8p3m:8 (2.07) BS01 CU ? N/A W0DP94 N/A
    850814 8p3m:8 (2.07) BS02 CU ? N/A W0DP94 N/A
    850815 8p3m:A (2.07) BS01 CU ? N/A W0DP94 N/A
    850816 8p3m:A (2.07) BS02 CU ? N/A W0DP94 N/A
    850817 8p3m:D (2.07) BS01 CU ? N/A W0DP94 N/A
    850818 8p3m:D (2.07) BS02 CU ? N/A W0DP94 N/A
    850819 8p3m:G (2.07) BS01 CU ? N/A W0DP94 N/A
    850820 8p3m:G (2.07) BS02 CU ? N/A W0DP94 N/A
    850821 8p3m:J (2.07) BS01 CU ? N/A W0DP94 N/A
    850822 8p3m:J (2.07) BS02 CU ? N/A W0DP94 N/A
    850823 8p3m:M (2.07) BS01 CU ? N/A W0DP94 N/A
    850824 8p3m:M (2.07) BS02 CU ? N/A W0DP94 N/A
    850825 8p3m:P (2.07) BS01 CU ? N/A W0DP94 N/A
    850826 8p3m:P (2.07) BS02 CU ? N/A W0DP94 N/A
    850827 8p3m:S (2.07) BS01 CU ? N/A W0DP94 N/A
    850828 8p3m:S (2.07) BS02 CU ? N/A W0DP94 N/A
    850829 8p3m:V (2.07) BS01 CU ? N/A W0DP94 N/A
    850830 8p3m:V (2.07) BS02 CU ? N/A W0DP94 N/A
    850831 8p3m:Y (2.07) BS01 CU ? N/A W0DP94 N/A
    850832 8p3m:Y (2.07) BS02 CU ? N/A W0DP94 N/A
    850833 8p3m:e (2.07) BS01 CU ? N/A W0DP94 N/A
    850834 8p3m:e (2.07) BS02 CU ? N/A W0DP94 N/A
    850835 8p3m:h (2.07) BS01 CU ? N/A W0DP94 N/A
    850836 8p3m:h (2.07) BS02 CU ? N/A W0DP94 N/A
    850837 8p3m:k (2.07) BS01 CU ? N/A W0DP94 N/A
    850838 8p3m:k (2.07) BS02 CU ? N/A W0DP94 N/A
    850839 8p3m:x (2.07) BS01 CU ? N/A W0DP94 N/A
    850840 8p3m:x (2.07) BS02 CU ? N/A W0DP94 N/A
    850841 8p3n:A (2.0) BS01 ADZ 2.7.13.3 GO:0016310 ... Q56310 N/A
    850842 8p3n:B (2.0) BS01 ADZ 2.7.13.3 GO:0016310 ... Q56310 N/A
    850843 8p3r:A (1.9) BS01 WUT 2.7.13.3 GO:0016310 ... Q56310 N/A
    850844 8p3r:B (1.9) BS01 WUT 2.7.13.3 GO:0016310 ... Q56310 N/A
    850845 8p41:A (1.83) BS01 WYC 2.4.1.-
    3.2.1.-
    3.2.1.45
    3.2.1.46
    GO:0000423 ... P04062 38381042
    850846 8p41:A (1.83) BS02 WYC 2.4.1.-
    3.2.1.-
    3.2.1.45
    3.2.1.46
    GO:0000423 ... P04062 38381042
    850847 8p41:B (1.83) BS01 WYC 2.4.1.-
    3.2.1.-
    3.2.1.45
    3.2.1.46
    GO:0000423 ... P04062 38381042
    850848 8p41:B (1.83) BS02 WYC 2.4.1.-
    3.2.1.-
    3.2.1.45
    3.2.1.46
    GO:0000423 ... P04062 38381042
    850849 8p42:A (2.64) BS01 WRX 5.2.1.8 GO:0003755 ... Q09734 N/A
    850850 8p42:D (2.64) BS01 WRX 5.2.1.8 GO:0003755 ... Q09734 N/A
    850851 8p43:A (2.43) BS01 peptide N/A N/A N/A N/A
    850852 8p44:A (1.93) BS01 WY8 ? GO:0004518 ... A0A7H0DNF0 38325369
    850853 8p44:A (1.93) BS02 WY8 ? GO:0004518 ... A0A7H0DNF0 38325369
    850854 8p44:B (1.93) BS01 WY8 ? GO:0004518 ... A0A7H0DNF0 38325369
    850855 8p44:B (1.93) BS02 WY8 ? GO:0004518 ... A0A7H0DNF0 38325369
    850856 8p44:C (1.93) BS01 WY8 ? GO:0004518 ... A0A7H0DNF0 38325369
    850857 8p44:C (1.93) BS02 WY8 ? GO:0004518 ... A0A7H0DNF0 38325369
    850858 8p44:D (1.93) BS01 WY8 ? GO:0004518 ... A0A7H0DNF0 38325369
    850859 8p44:D (1.93) BS02 WY8 ? GO:0004518 ... A0A7H0DNF0 38325369
    850860 8p45:A (3.23) BS01 WY8 ? GO:0002218 ... Q86WV6 38325369
    850861 8p46:A (1.77) BS01 FE 1.21.3.1 GO:0005506 ... P05326 N/A
    850862 8p46:A (1.77) BS02 IP1 1.21.3.1 GO:0005506 ... P05326 N/A
    850863 8p47:A (1.56) BS01 ACV 1.21.3.1 GO:0005506 ... P05326 N/A
    850864 8p47:A (1.56) BS02 FE 1.21.3.1 GO:0005506 ... P05326 N/A
    850865 8p48:A (1.63) BS01 ACV 1.21.3.1 GO:0005506 ... P05326 N/A
    850866 8p48:A (1.63) BS02 FE 1.21.3.1 GO:0005506 ... P05326 N/A
    850867 8p4a:A (3.6) BS01 rna 2.7.7.6 GO:0000428 ... A0A7M4DUC2 37369200
    850868 8p4a:A (3.6) BS02 dna 2.7.7.6 GO:0000428 ... A0A7M4DUC2 37369200
    850869 8p4a:A (3.6) BS03 MG 2.7.7.6 GO:0000428 ... A0A7M4DUC2 37369200
    850870 8p4a:A (3.6) BS04 ZN 2.7.7.6 GO:0000428 ... A0A7M4DUC2 37369200
    850871 8p4a:A (3.6) BS05 ZN 2.7.7.6 GO:0000428 ... A0A7M4DUC2 37369200
    850872 8p4a:B (3.6) BS01 rna 2.7.7.6 GO:0000428 ... I3LGP4 37369200
    850873 8p4a:B (3.6) BS02 dna 2.7.7.6 GO:0000428 ... I3LGP4 37369200
    850874 8p4a:B (3.6) BS03 ZN 2.7.7.6 GO:0000428 ... I3LGP4 37369200
    850875 8p4a:C (3.6) BS01 ZN ? GO:0000428 ... I3LCH3 37369200
    850876 8p4a:E (3.6) BS01 dna ? GO:0001054 ... I3LSI7 37369200
    850877 8p4a:I (3.6) BS01 ZN ? GO:0000428 ... P60899 37369200
    850878 8p4a:I (3.6) BS02 ZN ? GO:0000428 ... P60899 37369200
    850879 8p4a:J (3.6) BS01 ZN ? GO:0000428 ... A0A8W4F9W9 37369200
    850880 8p4a:L (3.6) BS01 ZN ? GO:0001054 ... A0A4X1TRS6 37369200
    850881 8p4a:M (3.6) BS01 rna 2.7.7.50
    3.6.1.74
    GO:0003824 ... O60942 37369200
    850882 8p4b:A (3.2) BS01 rna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37369200
    850883 8p4b:A (3.2) BS02 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37369200
    850884 8p4b:A (3.2) BS03 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37369200
    850885 8p4b:A (3.2) BS04 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37369200
    850886 8p4b:A (3.2) BS05 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37369200
    850887 8p4b:B (3.2) BS01 rna 2.7.7.6 GO:0000428 ... I3LGP4 37369200
    850888 8p4b:B (3.2) BS02 dna 2.7.7.6 GO:0000428 ... I3LGP4 37369200
    850889 8p4b:B (3.2) BS03 ZN 2.7.7.6 GO:0000428 ... I3LGP4 37369200
    850890 8p4b:C (3.2) BS01 ZN ? GO:0000428 ... I3LCH3 37369200
    850891 8p4b:E (3.2) BS01 dna ? GO:0001054 ... I3LSI7 37369200
    850892 8p4b:I (3.2) BS01 ZN ? GO:0000428 ... P60899 37369200
    850893 8p4b:I (3.2) BS02 ZN ? GO:0000428 ... P60899 37369200
    850894 8p4b:J (3.2) BS01 ZN ? GO:0000428 ... A0A8W4F9W9 37369200
    850895 8p4b:L (3.2) BS01 ZN ? GO:0001054 ... A0A4X1TRS6 37369200
    850896 8p4b:M (3.2) BS01 rna 2.7.7.50
    3.6.1.74
    GO:0003824 ... O60942 37369200
    850897 8p4c:A (3.8) BS01 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37369200
    850898 8p4c:A (3.8) BS02 rna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37369200
    850899 8p4c:A (3.8) BS03 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37369200
    850900 8p4c:A (3.8) BS04 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37369200
    850901 8p4c:A (3.8) BS05 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37369200
    850902 8p4c:B (3.8) BS01 dna 2.7.7.6 GO:0000428 ... I3LGP4 37369200
    850903 8p4c:B (3.8) BS02 dna 2.7.7.6 GO:0000428 ... I3LGP4 37369200
    850904 8p4c:B (3.8) BS03 rna 2.7.7.6 GO:0000428 ... I3LGP4 37369200
    850905 8p4d:A (3.6) BS01 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37369200
    850906 8p4d:A (3.6) BS02 rna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37369200
    850907 8p4d:B (3.6) BS01 dna 2.7.7.6 GO:0000428 ... I3LGP4 37369200
    850908 8p4d:B (3.6) BS02 dna 2.7.7.6 GO:0000428 ... I3LGP4 37369200
    850909 8p4d:B (3.6) BS03 rna 2.7.7.6 GO:0000428 ... I3LGP4 37369200
    850910 8p4e:A (3.9) BS01 rna 2.7.7.48
    2.7.7.6
    3.1.13.-
    GO:0000428 ... P11414 37369200
    850911 8p4e:A (3.9) BS02 dna 2.7.7.48
    2.7.7.6
    3.1.13.-
    GO:0000428 ... P11414 37369200
    850912 8p4e:A (3.9) BS03 dna 2.7.7.48
    2.7.7.6
    3.1.13.-
    GO:0000428 ... P11414 37369200
    850913 8p4e:A (3.9) BS04 MG 2.7.7.48
    2.7.7.6
    3.1.13.-
    GO:0000428 ... P11414 37369200
    850914 8p4e:A (3.9) BS05 ZN 2.7.7.48
    2.7.7.6
    3.1.13.-
    GO:0000428 ... P11414 37369200
    850915 8p4e:B (3.9) BS01 rna 2.7.7.6 GO:0000428 ... I3LGP4 37369200
    850916 8p4e:B (3.9) BS02 dna 2.7.7.6 GO:0000428 ... I3LGP4 37369200
    850917 8p4e:B (3.9) BS03 dna 2.7.7.6 GO:0000428 ... I3LGP4 37369200
    850918 8p4e:B (3.9) BS04 ZN 2.7.7.6 GO:0000428 ... I3LGP4 37369200
    850919 8p4e:C (3.9) BS01 ZN ? GO:0000428 ... I3LCH3 37369200
    850920 8p4e:I (3.9) BS01 ZN ? GO:0000428 ... P60899 37369200
    850921 8p4e:I (3.9) BS02 ZN ? GO:0000428 ... P60899 37369200
    850922 8p4e:J (3.9) BS01 ZN ? GO:0000428 ... A0A8W4F9W9 37369200
    850923 8p4e:L (3.9) BS01 ZN ? GO:0001054 ... A0A4X1TRS6 37369200
    850924 8p4e:O (3.9) BS01 rna 2.1.1.57 GO:0003676 ... Q8N1G2 37369200
    850925 8p4f:A (4.0) BS01 rna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37369200
    850926 8p4f:A (4.0) BS02 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37369200
    850927 8p4f:A (4.0) BS03 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37369200
    850928 8p4f:A (4.0) BS04 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37369200
    850929 8p4f:A (4.0) BS05 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 37369200
    850930 8p4f:B (4.0) BS01 rna 2.7.7.6 GO:0000428 ... I3LGP4 37369200
    850931 8p4f:B (4.0) BS02 dna 2.7.7.6 GO:0000428 ... I3LGP4 37369200
    850932 8p4f:B (4.0) BS03 dna 2.7.7.6 GO:0000428 ... I3LGP4 37369200
    850933 8p4f:B (4.0) BS04 ZN 2.7.7.6 GO:0000428 ... I3LGP4 37369200
    850934 8p4f:E (4.0) BS01 dna ? GO:0001054 ... I3LSI7 37369200
    850935 8p4f:I (4.0) BS01 ZN ? GO:0000428 ... P60899 37369200
    850936 8p4f:I (4.0) BS02 ZN ? GO:0000428 ... P60899 37369200
    850937 8p4f:J (4.0) BS01 ZN ? GO:0000428 ... A0A4X1VYD0 37369200
    850938 8p4f:L (4.0) BS01 ZN ? GO:0001054 ... A0A4X1TRS6 37369200
    850939 8p4f:O (4.0) BS01 rna 2.1.1.57 GO:0003676 ... Q8N1G2 37369200
    850940 8p4f:O (4.0) BS02 MGT 2.1.1.57 GO:0003676 ... Q8N1G2 37369200
    850941 8p4f:O (4.0) BS03 SAM 2.1.1.57 GO:0003676 ... Q8N1G2 37369200
    850942 8p4f:Y (4.0) BS01 ZN ? GO:0000122 ... P63272 37369200
    850943 8p4f:Z (4.0) BS01 rna ? GO:0000122 ... O00267 37369200
    850944 8p4g:A (2.59) BS01 CU ? GO:0005507 ... Q8ZWA8 38227199
    850945 8p4g:A (2.59) BS02 CU ? GO:0005507 ... Q8ZWA8 38227199
    850946 8p4g:A (2.59) BS03 CU ? GO:0005507 ... Q8ZWA8 38227199
    850947 8p4g:A (2.59) BS04 CU ? GO:0005507 ... Q8ZWA8 38227199
    850948 8p4g:B (2.59) BS01 CU ? GO:0005507 ... Q8ZWA8 38227199
    850949 8p4g:B (2.59) BS02 CU ? GO:0005507 ... Q8ZWA8 38227199
    850950 8p4g:B (2.59) BS03 CU ? GO:0005507 ... Q8ZWA8 38227199
    850951 8p4g:B (2.59) BS04 CU ? GO:0005507 ... Q8ZWA8 38227199
    850952 8p4h:A (1.71) BS01 UM6 2.5.1.6 GO:0004478 ... P31153 37591318
    850953 8p4h:A (1.71) BS02 SAM 2.5.1.6 GO:0004478 ... P31153 37591318
    850954 8p4h:A (1.71) BS03 UM6 2.5.1.6 GO:0004478 ... P31153 37591318
    850955 8p4h:B (1.71) BS01 UM6 2.5.1.6 GO:0004478 ... P31153 37591318
    850956 8p4h:B (1.71) BS02 MG 2.5.1.6 GO:0004478 ... P31153 37591318
    850957 8p4h:B (1.71) BS03 SAM 2.5.1.6 GO:0004478 ... P31153 37591318
    850958 8p4h:B (1.71) BS04 UM6 2.5.1.6 GO:0004478 ... P31153 37591318
    850959 8p4h:C (1.71) BS01 UM6 2.5.1.6 GO:0004478 ... P31153 37591318
    850960 8p4h:C (1.71) BS02 SAM 2.5.1.6 GO:0004478 ... P31153 37591318
    850961 8p4h:C (1.71) BS03 UM6 2.5.1.6 GO:0004478 ... P31153 37591318
    850962 8p4h:D (1.71) BS01 UM6 2.5.1.6 GO:0004478 ... P31153 37591318
    850963 8p4h:D (1.71) BS02 SAM 2.5.1.6 GO:0004478 ... P31153 37591318
    850964 8p4h:D (1.71) BS03 MG 2.5.1.6 GO:0004478 ... P31153 37591318
    850965 8p4h:D (1.71) BS04 UM6 2.5.1.6 GO:0004478 ... P31153 37591318
    850966 8p4m:A (2.5) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    850967 8p4m:A (2.5) BS02 BEF N/A GO:0000287 ... P0A6F5 39169181
    850968 8p4m:B (2.5) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    850969 8p4m:B (2.5) BS02 BEF N/A GO:0000287 ... P0A6F5 39169181
    850970 8p4m:C (2.5) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    850971 8p4m:C (2.5) BS02 BEF N/A GO:0000287 ... P0A6F5 39169181
    850972 8p4m:D (2.5) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    850973 8p4m:D (2.5) BS02 BEF N/A GO:0000287 ... P0A6F5 39169181
    850974 8p4m:E (2.5) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    850975 8p4m:E (2.5) BS02 BEF N/A GO:0000287 ... P0A6F5 39169181
    850976 8p4m:F (2.5) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    850977 8p4m:F (2.5) BS02 BEF N/A GO:0000287 ... P0A6F5 39169181
    850978 8p4m:G (2.5) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    850979 8p4m:G (2.5) BS02 BEF N/A GO:0000287 ... P0A6F5 39169181
    850980 8p4n:A (2.9) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    850981 8p4n:A (2.9) BS02 BEF N/A GO:0000287 ... P0A6F5 39169181
    850982 8p4n:B (2.9) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    850983 8p4n:B (2.9) BS02 BEF N/A GO:0000287 ... P0A6F5 39169181
    850984 8p4n:C (2.9) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    850985 8p4n:C (2.9) BS02 BEF N/A GO:0000287 ... P0A6F5 39169181
    850986 8p4n:D (2.9) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    850987 8p4n:D (2.9) BS02 BEF N/A GO:0000287 ... P0A6F5 39169181
    850988 8p4n:E (2.9) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    850989 8p4n:E (2.9) BS02 BEF N/A GO:0000287 ... P0A6F5 39169181
    850990 8p4n:F (2.9) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    850991 8p4n:F (2.9) BS02 BEF N/A GO:0000287 ... P0A6F5 39169181
    850992 8p4n:G (2.9) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    850993 8p4n:G (2.9) BS02 BEF N/A GO:0000287 ... P0A6F5 39169181
    850994 8p4o:A (3.04) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    850995 8p4o:A (3.04) BS02 BEF N/A GO:0000287 ... P0A6F5 39169181
    850996 8p4o:B (3.04) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    850997 8p4o:B (3.04) BS02 BEF N/A GO:0000287 ... P0A6F5 39169181
    850998 8p4o:C (3.04) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    850999 8p4o:D (3.04) BS01 ADP N/A GO:0000287 ... P0A6F5 39169181
    851000 8p4o:D (3.04) BS02 BEF N/A GO:0000287 ... P0A6F5 39169181

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).