SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4247 4248 4249 4250 4251 4252 4253 4254 4255 4256 4257 4258 4259 4260 4261 4262 4263 4264 4265 4266 4267 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    851201 8oo0:LF (3.1) BS01 rna ? GO:0000463 ... G0SFL0 38267453
    851202 8oo0:LG (3.1) BS01 rna ? GO:0003723 ... G0SAJ9 38267453
    851203 8oo0:LG (3.1) BS02 rna ? GO:0003723 ... G0SAJ9 38267453
    851204 8oo0:LH (3.1) BS01 rna ? GO:0003735 ... G0S0E5 38267453
    851205 8oo0:LI (3.1) BS01 rna ? GO:0003735 ... G0SEI1 38267453
    851206 8oo0:LI (3.1) BS02 rna ? GO:0003735 ... G0SEI1 38267453
    851207 8oo0:LJ (3.1) BS01 rna ? GO:0003735 ... G0SHQ2 38267453
    851208 8oo0:LJ (3.1) BS02 rna ? GO:0003735 ... G0SHQ2 38267453
    851209 8oo0:LK (3.1) BS01 rna ? GO:0000027 ... G0SGH8 38267453
    851210 8oo0:LL (3.1) BS01 rna ? GO:0003723 ... G0S992 38267453
    851211 8oo0:LM (3.1) BS01 rna ? GO:0003723 ... G0S1R0 38267453
    851212 8oo0:LN (3.1) BS01 rna ? GO:0002181 ... G0RZ88 38267453
    851213 8oo0:LN (3.1) BS02 rna ? GO:0002181 ... G0RZ88 38267453
    851214 8oo0:LO (3.1) BS01 rna ? GO:0003729 ... G0SH61 38267453
    851215 8oo0:LP (3.1) BS01 rna ? GO:0002181 ... G0SGY1 38267453
    851216 8oo0:LP (3.1) BS02 rna ? GO:0002181 ... G0SGY1 38267453
    851217 8oo0:LQ (3.1) BS01 rna ? GO:0003723 ... G0S9B5 38267453
    851218 8oo0:LR (3.1) BS01 rna ? GO:0003723 ... G0S9T3 38267453
    851219 8oo0:LR (3.1) BS02 rna ? GO:0003723 ... G0S9T3 38267453
    851220 8oo0:LS (3.1) BS01 rna ? GO:0003735 ... G0SCE2 38267453
    851221 8oo0:LS (3.1) BS02 rna ? GO:0003735 ... G0SCE2 38267453
    851222 8oo0:LT (3.1) BS01 rna ? GO:0003735 ... G0S0Z3 38267453
    851223 8oo0:LT (3.1) BS02 rna ? GO:0003735 ... G0S0Z3 38267453
    851224 8oo0:LU (3.1) BS01 rna ? GO:0002181 ... G0SDS8 38267453
    851225 8oo0:LV (3.1) BS01 rna ? GO:0003735 ... G0SI44 38267453
    851226 8oo0:LW (3.1) BS01 rna ? GO:0003735 ... G0S1P9 38267453
    851227 8oo0:LW (3.1) BS02 rna ? GO:0003735 ... G0S1P9 38267453
    851228 8oo0:LX (3.1) BS01 rna ? GO:0003735 ... G0S507 38267453
    851229 8oo0:LX (3.1) BS02 rna ? GO:0003735 ... G0S507 38267453
    851230 8oo0:LY (3.1) BS01 rna ? GO:0003723 ... G0RYN9 38267453
    851231 8oo0:LY (3.1) BS02 rna ? GO:0003723 ... G0RYN9 38267453
    851232 8oo0:LZ (3.1) BS01 rna ? GO:0003735 ... G0RZE9 38267453
    851233 8oo0:La (3.1) BS01 rna ? GO:0003735 ... G0SGT6 38267453
    851234 8oo0:Lb (3.1) BS01 rna ? GO:0002181 ... Q2H9W4 38267453
    851235 8oo0:Lc (3.1) BS01 rna ? GO:0003723 ... G0SEI0 38267453
    851236 8oo0:Ld (3.1) BS01 rna ? GO:0002181 ... G0SD68 38267453
    851237 8oo0:Le (3.1) BS01 rna ? GO:0003735 ... G0S6V4 38267453
    851238 8oo0:Lf (3.1) BS01 rna ? GO:0003735 ... G0SCL3 38267453
    851239 8oo0:Lg (3.1) BS01 rna ? GO:0003735 ... G0SFN0 38267453
    851240 8oo0:Lg (3.1) BS02 ZN ? GO:0003735 ... G0SFN0 38267453
    851241 8oo0:Lh (3.1) BS01 rna 2.4.99.18 GO:0000463 ... G0S0D7 38267453
    851242 8oo0:Lh (3.1) BS02 rna 2.4.99.18 GO:0000463 ... G0S0D7 38267453
    851243 8oo0:Li (3.1) BS01 rna ? GO:0003735 ... G0SBN1 38267453
    851244 8oo0:Lj (3.1) BS01 rna ? GO:0003723 ... G0S101 38267453
    851245 8oo0:Lj (3.1) BS02 rna ? GO:0003723 ... G0S101 38267453
    851246 8oo0:Lj (3.1) BS03 ZN ? GO:0003723 ... G0S101 38267453
    851247 8oo0:Lk (3.1) BS01 rna ? GO:0003735 ... G0SG89 38267453
    851248 8oo0:Ll (3.1) BS01 rna ? GO:0003735 ... Q2H9R2 38267453
    851249 8oo0:Ll (3.1) BS02 rna ? GO:0003735 ... Q2H9R2 38267453
    851250 8oo0:Lm (3.1) BS01 rna ? GO:0003735 ... G0S8G4 38267453
    851251 8oo0:Lm (3.1) BS02 ZN ? GO:0003735 ... G0S8G4 38267453
    851252 8oo0:Lo (3.1) BS01 rna ? GO:0003735 ... G0SBZ6 38267453
    851253 8oo0:Lo (3.1) BS02 ZN ? GO:0003735 ... G0SBZ6 38267453
    851254 8oo0:Lp (3.1) BS01 rna ? GO:0003735 ... G0S6B0 38267453
    851255 8oo0:Lp (3.1) BS02 ZN ? GO:0003735 ... G0S6B0 38267453
    851256 8oo0:Lq (3.1) BS01 rna ? GO:0003735 ... G0SHJ6 38267453
    851257 8oo0:Ls (3.1) BS01 rna ? GO:0000027 ... G0SGP3 38267453
    851258 8oo0:SA (3.1) BS01 rna ? GO:0000028 ... G0RYF9 38267453
    851259 8oo0:SB (3.1) BS01 rna ? GO:0003735 ... G0S7T8 38267453
    851260 8oo0:SC (3.1) BS01 rna ? GO:0003723 ... G0SAV4 38267453
    851261 8oo0:SD (3.1) BS01 rna ? GO:0003723 ... G0S6I7 38267453
    851262 8oo0:SE (3.1) BS01 rna ? GO:0002181 ... G0S1A6 38267453
    851263 8oo0:SF (3.1) BS01 rna ? GO:0003723 ... G0S1Z0 38267453
    851264 8oo0:SG (3.1) BS01 rna ? GO:0003735 ... G0RY43 38267453
    851265 8oo0:SH (3.1) BS01 rna ? GO:0003735 ... G0S8C4 38267453
    851266 8oo0:SI (3.1) BS01 rna ? GO:0003735 ... G0RY45 38267453
    851267 8oo0:SI (3.1) BS02 rna ? GO:0003735 ... G0RY45 38267453
    851268 8oo0:SJ (3.1) BS01 rna ? GO:0003723 ... G0S0Z4 38267453
    851269 8oo0:SK (3.1) BS01 rna ? GO:0003723 ... G0RZD8 38267453
    851270 8oo0:SL (3.1) BS01 rna ? GO:0003735 ... G0SF00 38267453
    851271 8oo0:SM (3.1) BS01 rna ? GO:0003735 ... G0SHH9 38267453
    851272 8oo0:SN (3.1) BS01 rna ? GO:0003735 ... G0RZM9 38267453
    851273 8oo0:SO (3.1) BS01 rna ? GO:0003735 ... G0SFL1 38267453
    851274 8oo0:SP (3.1) BS01 rna ? GO:0000028 ... G0S084 38267453
    851275 8oo0:SQ (3.1) BS01 rna ? GO:0000462 ... G0SBR7 38267453
    851276 8oo0:SR (3.1) BS01 rna ? GO:0003735 ... G0S871 38267453
    851277 8oo0:SS (3.1) BS01 rna ? GO:0003676 ... G0S6J7 38267453
    851278 8oo0:ST (3.1) BS01 rna ? GO:0000028 ... G0SFK8 38267453
    851279 8oo0:SU (3.1) BS01 rna ? GO:0003723 ... G0S379 38267453
    851280 8oo0:SW (3.1) BS01 rna ? GO:0003735 ... G0SHI0 38267453
    851281 8oo0:SX (3.1) BS01 rna ? GO:0003735 ... G0RY17 38267453
    851282 8oo0:SY (3.1) BS01 rna ? GO:0003735 ... P0CU28 38267453
    851283 8oo0:SZ (3.1) BS01 rna ? N/A G0S1Y9 38267453
    851284 8oo0:Sa (3.1) BS01 rna ? GO:0003729 ... G0S2X4 38267453
    851285 8oo0:Sa (3.1) BS02 ZN ? GO:0003729 ... G0S2X4 38267453
    851286 8oo0:Sb (3.1) BS01 rna ? GO:0003735 ... G0S1S4 38267453
    851287 8oo0:Sb (3.1) BS02 ZN ? GO:0003735 ... G0S1S4 38267453
    851288 8oo0:Sc (3.1) BS01 rna ? GO:0000028 ... G0S9M9 38267453
    851289 8oo0:Sd (3.1) BS01 rna ? GO:0002181 ... Q2HB68 38267453
    851290 8oo0:Sd (3.1) BS02 ZN ? GO:0002181 ... Q2HB68 38267453
    851291 8oo0:Se (3.1) BS01 rna ? GO:0003735 ... Q2H4C5 38267453
    851292 8oo0:Sf (3.1) BS01 rna ? GO:0003735 ... G0S2X5 38267453
    851293 8oo1:A (3.7) BS01 URA ? GO:0005886 ... P0AGM7 39209842
    851294 8oo1:A (3.7) BS02 DMU ? GO:0005886 ... P0AGM7 39209842
    851295 8oo1:A (3.7) BS03 DMU ? GO:0005886 ... P0AGM7 39209842
    851296 8oo1:C (3.7) BS01 DMU ? GO:0005886 ... P0AGM7 39209842
    851297 8oo1:C (3.7) BS02 URA ? GO:0005886 ... P0AGM7 39209842
    851298 8oo1:C (3.7) BS03 DMU ? GO:0005886 ... P0AGM7 39209842
    851299 8oo2:A (1.85) BS01 AV8 ? GO:0000976 ... V9XTV0 37466921
    851300 8oo2:B (1.85) BS01 AV8 ? GO:0000976 ... V9XTV0 37466921
    851301 8oo5:P (2.25) BS01 VUF 2.7.11.1 GO:0016567 ... Q9Y4B6 N/A
    851302 8oo5:P (2.25) BS02 VUF 2.7.11.1 GO:0016567 ... Q9Y4B6 N/A
    851303 8oo6:A (4.3) BS01 dna 2.7.7.7 GO:0003676 ... P00582 37620586
    851304 8oo6:A (4.3) BS02 dna 2.7.7.7 GO:0003676 ... P00582 37620586
    851305 8oo6:A (4.3) BS03 dna 2.7.7.7 GO:0003676 ... P00582 37620586
    851306 8oo7:A (2.8) BS01 ADP 3.6.4.12 GO:0000812 ... G0RYI5 37384673
    851307 8oo7:B (2.8) BS01 ADP 3.6.4.12 GO:0000812 ... G0RYI5 37384673
    851308 8oo7:C (2.8) BS01 ADP 3.6.4.12 GO:0000812 ... G0RYI5 37384673
    851309 8oo7:D (2.8) BS01 ADP 3.6.4.12 GO:0000812 ... G0RYC2 37384673
    851310 8oo7:E (2.8) BS01 ADP 3.6.4.12 GO:0000812 ... G0RYC2 37384673
    851311 8oo7:F (2.8) BS01 ADP 3.6.4.12 GO:0000812 ... G0RYC2 37384673
    851312 8oo7:G (2.8) BS01 dna N/A GO:0003677 ... N/A 37384673
    851313 8oo7:G (2.8) BS02 dna N/A GO:0003677 ... N/A 37384673
    851314 8oo7:G (2.8) BS03 ALF N/A GO:0003677 ... N/A 37384673
    851315 8oo7:G (2.8) BS04 ADP N/A GO:0003677 ... N/A 37384673
    851316 8oo7:J (2.8) BS01 dna ? N/A G0S589 37384673
    851317 8oo7:J (2.8) BS02 dna ? N/A G0S589 37384673
    851318 8oo7:J (2.8) BS03 ATP ? N/A G0S589 37384673
    851319 8oo7:M (2.8) BS01 dna ? GO:0000786 ... P68431 37384673
    851320 8oo7:M (2.8) BS02 dna ? GO:0000786 ... P68431 37384673
    851321 8oo7:N (2.8) BS01 dna ? GO:0000781 ... P62805 37384673
    851322 8oo7:N (2.8) BS02 dna ? GO:0000781 ... P62805 37384673
    851323 8oo7:O (2.8) BS01 dna ? GO:0000786 ... Q93077 37384673
    851324 8oo7:O (2.8) BS02 dna ? GO:0000786 ... Q93077 37384673
    851325 8oo7:P (2.8) BS01 dna ? GO:0000786 ... P62807 37384673
    851326 8oo7:P (2.8) BS02 dna ? GO:0000786 ... P62807 37384673
    851327 8oo7:Q (2.8) BS01 dna ? GO:0000786 ... P68431 37384673
    851328 8oo7:Q (2.8) BS02 dna ? GO:0000786 ... P68431 37384673
    851329 8oo7:R (2.8) BS01 dna ? GO:0000781 ... P62805 37384673
    851330 8oo7:R (2.8) BS02 dna ? GO:0000781 ... P62805 37384673
    851331 8oo8:A (1.4) BS01 ZN 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 39688904
    851332 8oo8:A (1.4) BS02 VV8 4.2.1.1
    4.2.1.69
    GO:0004064 ... P00918 39688904
    851333 8oo9:G (3.2) BS01 dna N/A GO:0003677 ... N/A 37384673
    851334 8oo9:G (3.2) BS02 dna N/A GO:0003677 ... N/A 37384673
    851335 8oo9:G (3.2) BS03 ADP N/A GO:0003677 ... N/A 37384673
    851336 8oo9:G (3.2) BS04 ALF N/A GO:0003677 ... N/A 37384673
    851337 8ooa:M (3.18) BS01 dna ? GO:0000786 ... P68431 37384673
    851338 8ooa:M (3.18) BS02 dna ? GO:0000786 ... P68431 37384673
    851339 8ooa:N (3.18) BS01 dna ? GO:0000781 ... P62805 37384673
    851340 8ooa:N (3.18) BS02 dna ? GO:0000781 ... P62805 37384673
    851341 8ooa:O (3.18) BS01 dna ? GO:0000786 ... Q93077 37384673
    851342 8ooa:O (3.18) BS02 dna ? GO:0000786 ... Q93077 37384673
    851343 8ooa:P (3.18) BS01 dna ? GO:0000786 ... P62807 37384673
    851344 8ooa:P (3.18) BS02 dna ? GO:0000786 ... P62807 37384673
    851345 8ooa:Q (3.18) BS01 dna ? GO:0000786 ... P68431 37384673
    851346 8ooa:Q (3.18) BS02 dna ? GO:0000786 ... P68431 37384673
    851347 8ooa:R (3.18) BS01 dna ? GO:0000781 ... P62805 37384673
    851348 8ooa:R (3.18) BS02 dna ? GO:0000781 ... P62805 37384673
    851349 8ooc:A (2.93) BS01 ADP 3.6.4.12 GO:0000812 ... G0RYI5 37384673
    851350 8ooc:B (2.93) BS01 ADP 3.6.4.12 GO:0000812 ... G0RYI5 37384673
    851351 8ooc:C (2.93) BS01 ADP 3.6.4.12 GO:0000812 ... G0RYI5 37384673
    851352 8ooc:D (2.93) BS01 ADP 3.6.4.12 GO:0000812 ... G0RYC2 37384673
    851353 8ooc:E (2.93) BS01 ADP 3.6.4.12 GO:0000812 ... G0RYC2 37384673
    851354 8ooc:F (2.93) BS01 ADP 3.6.4.12 GO:0000812 ... G0RYC2 37384673
    851355 8ooc:J (2.93) BS01 ATP ? N/A G0S589 37384673
    851356 8ood:A (1.497) BS01 MG 2.7.11.1 GO:0016567 ... Q9Y4B6 N/A
    851357 8ood:A (1.497) BS02 VY3 2.7.11.1 GO:0016567 ... Q9Y4B6 N/A
    851358 8ood:A (1.497) BS03 VY3 2.7.11.1 GO:0016567 ... Q9Y4B6 N/A
    851359 8oof:J (2.9) BS01 ATP ? N/A G0S589 37384673
    851360 8oog:A (1.384) BS01 SAM 2.5.1.6 GO:0004478 ... P31153 37389247
    851361 8oog:A (1.384) BS02 VUO 2.5.1.6 GO:0004478 ... P31153 37389247
    851362 8ooi:A (2.61) BS01 ADP 3.6.4.6 GO:0000153 ... P55072 38326645
    851363 8ooi:A (2.61) BS02 ATP 3.6.4.6 GO:0000153 ... P55072 38326645
    851364 8ooi:A (2.61) BS03 MG 3.6.4.6 GO:0000153 ... P55072 38326645
    851365 8ooi:B (2.61) BS01 ADP 3.6.4.6 GO:0000153 ... P55072 38326645
    851366 8ooi:B (2.61) BS02 ATP 3.6.4.6 GO:0000153 ... P55072 38326645
    851367 8ooi:B (2.61) BS03 MG 3.6.4.6 GO:0000153 ... P55072 38326645
    851368 8ooi:C (2.61) BS01 ADP 3.6.4.6 GO:0000153 ... P55072 38326645
    851369 8ooi:C (2.61) BS02 ATP 3.6.4.6 GO:0000153 ... P55072 38326645
    851370 8ooi:C (2.61) BS03 MG 3.6.4.6 GO:0000153 ... P55072 38326645
    851371 8ooi:D (2.61) BS01 ADP 3.6.4.6 GO:0000153 ... P55072 38326645
    851372 8ooi:D (2.61) BS02 ATP 3.6.4.6 GO:0000153 ... P55072 38326645
    851373 8ooi:D (2.61) BS03 MG 3.6.4.6 GO:0000153 ... P55072 38326645
    851374 8ooi:E (2.61) BS01 ADP 3.6.4.6 GO:0000153 ... P55072 38326645
    851375 8ooi:E (2.61) BS02 ATP 3.6.4.6 GO:0000153 ... P55072 38326645
    851376 8ooi:E (2.61) BS03 MG 3.6.4.6 GO:0000153 ... P55072 38326645
    851377 8ooi:F (2.61) BS01 ADP 3.6.4.6 GO:0000153 ... P55072 38326645
    851378 8ooi:F (2.61) BS02 ATP 3.6.4.6 GO:0000153 ... P55072 38326645
    851379 8ooi:F (2.61) BS03 MG 3.6.4.6 GO:0000153 ... P55072 38326645
    851380 8ooj:A (2.1) BS01 UDP 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 38064712
    851381 8ooj:A (2.1) BS02 VVC 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 38064712
    851382 8ooj:B (2.1) BS01 UDP 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 38064712
    851383 8ooj:B (2.1) BS02 VVC 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 38064712
    851384 8ooj:C (2.1) BS01 UDP 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 38064712
    851385 8ooj:C (2.1) BS02 VVC 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 38064712
    851386 8ooj:D (2.1) BS01 UDP 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 38064712
    851387 8ooj:D (2.1) BS02 VVC 2.7.1.113
    2.7.1.74
    2.7.1.76
    GO:0004136 ... P27707 38064712
    851388 8oom:A (1.82) BS01 PNY ? GO:0004060 ... Q84G21 40075103
    851389 8ooo:A (2.149) BS01 ATP N/A GO:0003824 ... A0AAN0NP89 38243071
    851390 8ooo:A (2.149) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    851391 8ooo:A (2.149) BS03 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    851392 8ooo:B (2.149) BS01 ATP N/A GO:0003824 ... A0AAN0NP89 38243071
    851393 8ooo:B (2.149) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    851394 8ooo:B (2.149) BS03 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    851395 8ooo:C (2.149) BS01 ATP N/A GO:0003824 ... A0AAN0NP89 38243071
    851396 8ooo:C (2.149) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    851397 8ooo:C (2.149) BS03 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    851398 8ooo:D (2.149) BS01 ATP N/A GO:0003824 ... A0AAN0NP89 38243071
    851399 8ooo:D (2.149) BS02 AKG N/A GO:0003824 ... A0AAN0NP89 38243071
    851400 8ooo:D (2.149) BS03 AKG N/A GO:0003824 ... A0AAN0NP89 38243071

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).