SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    851601 8op1:C (3.5) BS01 rna ? GO:0003723 ... P03418 37714861
    851602 8op1:D (3.5) BS01 rna ? GO:0003723 ... P03418 37714861
    851603 8op1:D (3.5) BS02 rna ? GO:0003723 ... P03418 37714861
    851604 8op1:E (3.5) BS01 rna ? GO:0003723 ... P03418 37714861
    851605 8op1:E (3.5) BS02 rna ? GO:0003723 ... P03418 37714861
    851606 8op2:A (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    851607 8op2:B (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    851608 8op2:D (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    851609 8op2:E (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    851610 8op2:G (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    851611 8op2:H (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    851612 8op2:J (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    851613 8op2:K (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    851614 8op2:M (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    851615 8op2:N (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    851616 8op2:P (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    851617 8op2:Q (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    851618 8op2:S (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    851619 8op2:T (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    851620 8op2:c (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    851621 8op2:d (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    851622 8op2:g (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    851623 8op2:h (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    851624 8op2:k (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    851625 8op2:l (2.8) BS01 rna ? GO:0003723 ... P03418 37714861
    851626 8op4:A (3.2) BS01 ANP N/A GO:0000166 ... G0S4Z4 39505844
    851627 8op5:A (3.47) BS01 ADP N/A GO:0000166 ... G0S4Z4 39505844
    851628 8op5:A (3.47) BS02 ALF N/A GO:0000166 ... G0S4Z4 39505844
    851629 8op5:A (3.47) BS03 MG N/A GO:0000166 ... G0S4Z4 39505844
    851630 8op6:A (3.79) BS01 ALF N/A GO:0000166 ... G0S4Z4 39505844
    851631 8op6:A (3.79) BS02 MG N/A GO:0000166 ... G0S4Z4 39505844
    851632 8op7:A (3.5) BS01 BEF N/A GO:0000166 ... G0S4Z4 39505844
    851633 8op7:A (3.5) BS02 MG N/A GO:0000166 ... G0S4Z4 39505844
    851634 8op8:A (3.48) BS01 ALF N/A GO:0000166 ... G0S4Z4 39505844
    851635 8op8:A (3.48) BS02 MG N/A GO:0000166 ... G0S4Z4 39505844
    851636 8op9:A (3.36) BS01 ABU ? GO:0004888 ... P24046 37659407
    851637 8op9:A (3.36) BS02 ABU ? GO:0004888 ... P24046 37659407
    851638 8op9:B (3.36) BS01 ABU ? GO:0004888 ... P24046 37659407
    851639 8op9:B (3.36) BS02 ABU ? GO:0004888 ... P24046 37659407
    851640 8op9:C (3.36) BS01 ABU ? GO:0004888 ... P24046 37659407
    851641 8op9:D (3.36) BS01 ABU ? GO:0004888 ... P24046 37659407
    851642 8op9:E (3.36) BS01 ABU ? GO:0004888 ... P24046 37659407
    851643 8op9:E (3.36) BS02 ABU ? GO:0004888 ... P24046 37659407
    851644 8opc:Aa (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851645 8opc:Ac (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851646 8opc:Ae (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851647 8opc:Ag (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851648 8opc:Ai (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851649 8opc:Ak (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851650 8opc:Am (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851651 8opc:Ao (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851652 8opc:Aq (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851653 8opc:As (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851654 8opc:Au (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851655 8opc:Aw (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851656 8opc:Ay (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851657 8opc:Ba (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851658 8opc:Bc (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851659 8opc:Be (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851660 8opc:Bg (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851661 8opc:Bi (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851662 8opc:Bk (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851663 8opc:Bm (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851664 8opc:Bo (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851665 8opc:Bq (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851666 8opc:Bs (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851667 8opc:Bu (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851668 8opc:Bw (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851669 8opc:By (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851670 8opc:Ca (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851671 8opc:Cc (2.99) BS01 rna ? GO:0019028 ... Q1XFM2 38233506
    851672 8ope:Aa (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    851673 8ope:Ac (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    851674 8ope:Ae (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    851675 8ope:Ag (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    851676 8ope:Ai (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    851677 8ope:Ak (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    851678 8ope:Am (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    851679 8ope:Ao (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    851680 8ope:Aq (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    851681 8ope:As (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    851682 8ope:Au (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    851683 8ope:Aw (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    851684 8ope:Ay (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    851685 8ope:Ba (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    851686 8ope:Bc (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    851687 8ope:Be (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    851688 8ope:Bg (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    851689 8ope:Bi (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    851690 8ope:Bk (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    851691 8ope:Bm (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    851692 8ope:Bo (3.09) BS01 rna ? GO:0019028 ... C4N415 38233506
    851693 8opi:A (1.83) BS01 peptide N/A N/A N/A 38484799
    851694 8opl:Aa (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851695 8opl:Ab (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851696 8opl:Ac (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851697 8opl:Ad (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851698 8opl:Ae (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851699 8opl:Af (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851700 8opl:Ag (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851701 8opl:Ah (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851702 8opl:Ai (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851703 8opl:As (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851704 8opl:At (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851705 8opl:Au (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851706 8opl:Av (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851707 8opl:Aw (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851708 8opl:Ax (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851709 8opl:Ay (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851710 8opl:Az (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851711 8opl:Ba (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851712 8opl:Bk (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851713 8opl:Bl (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851714 8opl:Bm (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851715 8opl:Bn (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851716 8opl:Bo (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851717 8opl:Bp (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851718 8opl:Bq (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851719 8opl:Br (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851720 8opl:Bs (2.41) BS01 rna ? GO:0019028 ... C4N415 38233506
    851721 8opm:A (3.7) BS01 SIA ? GO:0003700 ... E0YJ44 37794193
    851722 8opm:A (3.7) BS02 5N6 ? GO:0003700 ... E0YJ44 37794193
    851723 8opm:B (3.7) BS01 SIA ? GO:0003700 ... E0YJ44 37794193
    851724 8opm:B (3.7) BS02 5N6 ? GO:0003700 ... E0YJ44 37794193
    851725 8opm:C (3.7) BS01 SIA ? GO:0003700 ... E0YJ44 37794193
    851726 8opm:C (3.7) BS02 5N6 ? GO:0003700 ... E0YJ44 37794193
    851727 8opn:A (4.7) BS01 SIA ? GO:0003700 ... E0YJ44 37794193
    851728 8opn:A (4.7) BS02 5N6 ? GO:0003700 ... E0YJ44 37794193
    851729 8opn:B (4.7) BS01 SIA ? GO:0003700 ... E0YJ44 37794193
    851730 8opn:B (4.7) BS02 5N6 ? GO:0003700 ... E0YJ44 37794193
    851731 8opn:C (4.7) BS01 SIA ? GO:0003700 ... E0YJ44 37794193
    851732 8opn:C (4.7) BS02 5N6 ? GO:0003700 ... E0YJ44 37794193
    851733 8opo:A (3.6) BS01 5N6 ? GO:0003700 ... E0YJ44 37794193
    851734 8opo:B (3.6) BS01 5N6 ? GO:0003700 ... E0YJ44 37794193
    851735 8opo:C (3.6) BS01 5N6 ? GO:0003700 ... E0YJ44 37794193
    851736 8opp:A (3.76) BS01 rna N/A GO:0001556 ... Q5VYS8 39054354
    851737 8opp:A (3.76) BS02 P5E N/A GO:0001556 ... Q5VYS8 39054354
    851738 8opr:A (1.811) BS01 CA ? N/A P94217 37923757
    851739 8opr:A (1.811) BS02 CA ? N/A P94217 37923757
    851740 8opr:A (1.811) BS03 CA ? N/A P94217 37923757
    851741 8ops:A (3.82) BS01 rna N/A GO:0001556 ... Q5VYS8 39054354
    851742 8ops:B (3.82) BS01 rna N/A GO:0000932 ... Q9H9Z2 39054354
    851743 8ops:B (3.82) BS02 ZN N/A GO:0000932 ... Q9H9Z2 39054354
    851744 8opt:A (3.65) BS01 rna N/A GO:0001556 ... Q5VYS8 39054354
    851745 8opt:A (3.65) BS02 ZN N/A GO:0001556 ... Q5VYS8 39054354
    851746 8opt:B (3.65) BS01 rna N/A GO:0000932 ... Q9H9Z2 39054354
    851747 8opt:B (3.65) BS02 ZN N/A GO:0000932 ... Q9H9Z2 39054354
    851748 8opu:A (3.04) BS01 08D 1.1.1.35 GO:0003857 ... O53872 39012716
    851749 8opu:B (3.04) BS01 08D 1.1.1.35 GO:0003857 ... O53872 39012716
    851750 8opu:B (3.04) BS02 08D 1.1.1.35 GO:0003857 ... O53872 39012716
    851751 8opu:C (3.04) BS01 08D 2.3.1.- GO:0003985 ... O53871 39012716
    851752 8opu:D (3.04) BS01 08D 2.3.1.- GO:0003985 ... O53871 39012716
    851753 8opv:A (2.8) BS01 STL 1.1.1.35 GO:0003857 ... O53872 39012716
    851754 8opv:A (2.8) BS02 STL 1.1.1.35 GO:0003857 ... O53872 39012716
    851755 8opv:B (2.8) BS01 STL 1.1.1.35 GO:0003857 ... O53872 39012716
    851756 8opv:B (2.8) BS02 STL 1.1.1.35 GO:0003857 ... O53872 39012716
    851757 8opx:C (2.9) BS01 GLC 2.3.1.- GO:0003985 ... O53871 39012716
    851758 8opx:D (2.9) BS01 GLC 2.3.1.- GO:0003985 ... O53871 39012716
    851759 8opx:D (2.9) BS02 GLC 2.3.1.- GO:0003985 ... O53871 39012716
    851760 8opy:D (2.45) BS01 DNQ 2.3.1.- GO:0003985 ... O53871 39012716
    851761 8oq2:A (1.91) BS01 NAP 1.17.1.9 GO:0005737 ... D7A8L2 N/A
    851762 8oq2:B (1.91) BS01 NAP 1.17.1.9 GO:0005737 ... D7A8L2 N/A
    851763 8oq2:B (1.91) BS02 AZI 1.17.1.9 GO:0005737 ... D7A8L2 N/A
    851764 8oq2:B (1.91) BS03 AZI 1.17.1.9 GO:0005737 ... D7A8L2 N/A
    851765 8oq2:B (1.91) BS04 AZI 1.17.1.9 GO:0005737 ... D7A8L2 N/A
    851766 8oq2:C (1.91) BS01 NAP 1.17.1.9 GO:0005737 ... D7A8L2 N/A
    851767 8oq2:C (1.91) BS02 AZI 1.17.1.9 GO:0005737 ... D7A8L2 N/A
    851768 8oq2:D (1.91) BS01 NAP 1.17.1.9 GO:0005737 ... D7A8L2 N/A
    851769 8oq2:E (1.91) BS01 NAP 1.17.1.9 GO:0005737 ... D7A8L2 N/A
    851770 8oq2:F (1.91) BS01 NAP 1.17.1.9 GO:0005737 ... D7A8L2 N/A
    851771 8oq6:A (3.21) BS01 7P9 ? GO:0004888 ... P24046 37659407
    851772 8oq6:B (3.21) BS01 7P9 ? GO:0004888 ... P24046 37659407
    851773 8oq6:C (3.21) BS01 7P9 ? GO:0004888 ... P24046 37659407
    851774 8oq6:D (3.21) BS01 7P9 ? GO:0004888 ... P24046 37659407
    851775 8oq6:E (3.21) BS01 7P9 ? GO:0004888 ... P24046 37659407
    851776 8oq7:A (2.2) BS01 VZA ? GO:0004888 ... P24046 37659407
    851777 8oq7:B (2.2) BS01 VZA ? GO:0004888 ... P24046 37659407
    851778 8oq7:C (2.2) BS01 VZA ? GO:0004888 ... P24046 37659407
    851779 8oq7:D (2.2) BS01 VZA ? GO:0004888 ... P24046 37659407
    851780 8oq7:E (2.2) BS01 VZA ? GO:0004888 ... P24046 37659407
    851781 8oq8:A (2.9) BS01 RI5 ? GO:0004888 ... P24046 37659407
    851782 8oq8:E (2.9) BS01 RI5 ? GO:0004888 ... P24046 37659407
    851783 8oq9:A (1.65) BS01 ZN 2.7.11.1 N/A Q8WZ42 37549721
    851784 8oq9:B (1.65) BS01 ZN 2.7.11.1 N/A Q8WZ42 37549721
    851785 8oq9:C (1.65) BS01 ZN 2.7.11.1 N/A Q8WZ42 37549721
    851786 8oqa:A (2.9) BS01 ABU ? GO:0004888 ... P24046 37659407
    851787 8oqa:A (2.9) BS02 RI5 ? GO:0004888 ... P24046 37659407
    851788 8oqa:B (2.9) BS01 ABU ? GO:0004888 ... P24046 37659407
    851789 8oqa:B (2.9) BS02 RI5 ? GO:0004888 ... P24046 37659407
    851790 8oqa:C (2.9) BS01 ABU ? GO:0004888 ... P24046 37659407
    851791 8oqa:D (2.9) BS01 ABU ? GO:0004888 ... P24046 37659407
    851792 8oqa:D (2.9) BS02 ABU ? GO:0004888 ... P24046 37659407
    851793 8oqa:E (2.9) BS01 ABU ? GO:0004888 ... P24046 37659407
    851794 8oqc:A (1.5) BS01 D1O 4.6.1.18 GO:0003676 ... P61823 37144589
    851795 8oqc:A (1.5) BS02 VVU 4.6.1.18 GO:0003676 ... P61823 37144589
    851796 8oqd:A (1.54) BS01 D1O 4.6.1.18 GO:0003676 ... P61823 37144589
    851797 8oqd:A (1.54) BS02 VVU 4.6.1.18 GO:0003676 ... P61823 37144589
    851798 8oqe:A (1.5) BS01 VVU 4.6.1.18 GO:0003676 ... P61823 37144589
    851799 8oqe:A (1.5) BS02 D1O 4.6.1.18 GO:0003676 ... P61823 37144589
    851800 8oqf:A (1.5) BS01 VVU 4.6.1.18 GO:0003676 ... P61823 37144589

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).