SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 4255 4256 4257 4258 4259 4260 4261 4262 4263 4264 4265 4266 4267 4268 4269 4270 4271 4272 4273 4274 4275 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    852801 8p9a:DD (2.9) BS02 OHX N/A GO:0002181 ... P05747 N/A
    852802 8p9a:DE (2.9) BS01 rna N/A GO:0002181 ... P14120 N/A
    852803 8p9a:DF (2.9) BS01 rna N/A GO:0002181 ... P0C2H8 N/A
    852804 8p9a:DG (2.9) BS01 rna N/A GO:0002181 ... P38061 N/A
    852805 8p9a:DH (2.9) BS01 rna N/A GO:0000027 ... P05744 N/A
    852806 8p9a:DH (2.9) BS02 MG N/A GO:0000027 ... P05744 N/A
    852807 8p9a:DI (2.9) BS01 rna N/A GO:0002181 ... P87262 N/A
    852808 8p9a:DI (2.9) BS02 MG N/A GO:0002181 ... P87262 N/A
    852809 8p9a:DI (2.9) BS03 ZN N/A GO:0002181 ... P87262 N/A
    852810 8p9a:DJ (2.9) BS01 rna N/A GO:0000463 ... P0CX84 N/A
    852811 8p9a:DJ (2.9) BS02 rna N/A GO:0000463 ... P0CX84 N/A
    852812 8p9a:DK (2.9) BS01 rna N/A GO:0002181 ... P05745 N/A
    852813 8p9a:DL (2.9) BS01 rna N/A GO:0000448 ... P49166 N/A
    852814 8p9a:DL (2.9) BS02 rna N/A GO:0000448 ... P49166 N/A
    852815 8p9a:DL (2.9) BS03 OHX N/A GO:0000448 ... P49166 N/A
    852816 8p9a:DL (2.9) BS04 OHX N/A GO:0000448 ... P49166 N/A
    852817 8p9a:DL (2.9) BS05 ZN N/A GO:0000448 ... P49166 N/A
    852818 8p9a:DM (2.9) BS01 rna N/A GO:0002181 ... P49167 N/A
    852819 8p9a:DN (2.9) BS01 rna N/A GO:0002181 ... P04650 N/A
    852820 8p9a:DN (2.9) BS02 rna N/A GO:0002181 ... P04650 N/A
    852821 8p9a:DO (2.9) BS01 rna N/A GO:0000027 ... P0CH08 N/A
    852822 8p9a:DO (2.9) BS02 ZN N/A GO:0000027 ... P0CH08 N/A
    852823 8p9a:DQ (2.9) BS01 rna N/A GO:0002181 ... P0CX27 N/A
    852824 8p9a:DQ (2.9) BS02 XBI N/A GO:0002181 ... P0CX27 N/A
    852825 8p9a:DQ (2.9) BS03 ZN N/A GO:0002181 ... P0CX27 N/A
    852826 8p9a:DQ (2.9) BS04 OHX N/A GO:0002181 ... P0CX27 N/A
    852827 8p9a:DR (2.9) BS01 rna N/A GO:0002181 ... P0CX25 N/A
    852828 8p9a:DR (2.9) BS02 rna N/A GO:0002181 ... P0CX25 N/A
    852829 8p9a:DR (2.9) BS03 ZN N/A GO:0002181 ... P0CX25 N/A
    852830 8p9a:E (2.9) BS01 rna N/A GO:0000054 ... P05750 N/A
    852831 8p9a:F (2.9) BS01 rna N/A GO:0002181 ... P0CX35 N/A
    852832 8p9a:F (2.9) BS02 MG N/A GO:0002181 ... P0CX35 N/A
    852833 8p9a:G (2.9) BS01 rna N/A GO:0000028 ... P26783 N/A
    852834 8p9a:H (2.9) BS01 rna N/A GO:0000462 ... P0CX37 N/A
    852835 8p9a:I (2.9) BS01 rna N/A GO:0002181 ... P26786 N/A
    852836 8p9a:J (2.9) BS01 rna N/A GO:0000462 ... P0CX39 N/A
    852837 8p9a:J (2.9) BS02 rna N/A GO:0000462 ... P0CX39 N/A
    852838 8p9a:J (2.9) BS03 OHX N/A GO:0000462 ... P0CX39 N/A
    852839 8p9a:K (2.9) BS01 rna N/A GO:0000462 ... O13516 N/A
    852840 8p9a:L (2.9) BS01 rna N/A GO:0000054 ... Q08745 N/A
    852841 8p9a:M (2.9) BS01 rna N/A GO:0000028 ... P0CX47 N/A
    852842 8p9a:N (2.9) BS01 rna N/A GO:0000028 ... P48589 N/A
    852843 8p9a:O (2.9) BS01 rna N/A GO:0000462 ... P05756 N/A
    852844 8p9a:O (2.9) BS02 rna N/A GO:0000462 ... P05756 N/A
    852845 8p9a:O (2.9) BS03 OHX N/A GO:0000462 ... P05756 N/A
    852846 8p9a:P (2.9) BS01 rna N/A GO:0000028 ... P06367 N/A
    852847 8p9a:Q (2.9) BS01 rna N/A GO:0000028 ... Q01855 N/A
    852848 8p9a:Q (2.9) BS02 OHX N/A GO:0000028 ... Q01855 N/A
    852849 8p9a:R (2.9) BS01 rna N/A GO:0000462 ... P0CX51 N/A
    852850 8p9a:Rb (2.9) BS01 rna N/A GO:0001965 ... P38011 N/A
    852851 8p9a:S (2.9) BS01 rna N/A GO:0000028 ... P02407 N/A
    852852 8p9a:S (2.9) BS02 OHX N/A GO:0000028 ... P02407 N/A
    852853 8p9a:T (2.9) BS01 rna N/A GO:0000054 ... P0CX55 N/A
    852854 8p9a:T (2.9) BS02 OHX N/A GO:0000054 ... P0CX55 N/A
    852855 8p9a:U (2.9) BS01 rna N/A GO:0000028 ... P07280 N/A
    852856 8p9a:U (2.9) BS02 MG N/A GO:0000028 ... P07280 N/A
    852857 8p9a:V (2.9) BS01 rna N/A GO:0000462 ... P38701 N/A
    852858 8p9a:X (2.9) BS01 rna N/A GO:0002181 ... P0C0W1 N/A
    852859 8p9a:Y (2.9) BS01 rna N/A GO:0000462 ... P0CX29 N/A
    852860 8p9a:Y (2.9) BS02 OHX N/A GO:0000462 ... P0CX29 N/A
    852861 8p9a:Z (2.9) BS01 rna N/A GO:0000462 ... P0CX31 N/A
    852862 8p9a:a (2.9) BS01 rna N/A GO:0002181 ... Q3E792 N/A
    852863 8p9a:b (2.9) BS01 rna N/A GO:0000054 ... P39939 N/A
    852864 8p9a:b (2.9) BS02 ZN N/A GO:0000054 ... P39939 N/A
    852865 8p9a:c (2.9) BS01 rna N/A GO:0000028 ... P35997 N/A
    852866 8p9a:c (2.9) BS02 ZN N/A GO:0000028 ... P35997 N/A
    852867 8p9a:c0 (2.9) BS01 rna N/A GO:0000054 ... Q08745 N/A
    852868 8p9a:c1 (2.9) BS01 rna N/A GO:0000028 ... P0CX47 N/A
    852869 8p9a:c3 (2.9) BS01 rna N/A GO:0000462 ... P05756 N/A
    852870 8p9a:c3 (2.9) BS02 OHX N/A GO:0000462 ... P05756 N/A
    852871 8p9a:c4 (2.9) BS01 rna N/A GO:0000028 ... P06367 N/A
    852872 8p9a:c4 (2.9) BS02 MG N/A GO:0000028 ... P06367 N/A
    852873 8p9a:c5 (2.9) BS01 rna N/A GO:0000028 ... Q01855 N/A
    852874 8p9a:c5 (2.9) BS02 OHX N/A GO:0000028 ... Q01855 N/A
    852875 8p9a:c6 (2.9) BS01 rna N/A GO:0000462 ... P0CX51 N/A
    852876 8p9a:c6 (2.9) BS02 MG N/A GO:0000462 ... P0CX51 N/A
    852877 8p9a:c7 (2.9) BS01 rna N/A GO:0000028 ... P02407 N/A
    852878 8p9a:c8 (2.9) BS01 rna N/A GO:0000054 ... P0CX55 N/A
    852879 8p9a:c9 (2.9) BS01 rna N/A GO:0000028 ... P07280 N/A
    852880 8p9a:c9 (2.9) BS02 MG N/A GO:0000028 ... P07280 N/A
    852881 8p9a:d (2.9) BS01 rna N/A GO:0000028 ... Q3E7X9 N/A
    852882 8p9a:d0 (2.9) BS01 rna N/A GO:0000462 ... P38701 N/A
    852883 8p9a:d2 (2.9) BS01 rna N/A GO:0002181 ... P0C0W1 N/A
    852884 8p9a:d3 (2.9) BS01 rna N/A GO:0000462 ... P0CX29 N/A
    852885 8p9a:d3 (2.9) BS02 MG N/A GO:0000462 ... P0CX29 N/A
    852886 8p9a:d4 (2.9) BS01 rna N/A GO:0000462 ... P0CX31 N/A
    852887 8p9a:d5 (2.9) BS01 rna N/A GO:0002181 ... Q3E792 N/A
    852888 8p9a:d6 (2.9) BS01 rna N/A GO:0000054 ... P39939 N/A
    852889 8p9a:d6 (2.9) BS02 ZN N/A GO:0000054 ... P39939 N/A
    852890 8p9a:d7 (2.9) BS01 rna N/A GO:0000028 ... P35997 N/A
    852891 8p9a:d7 (2.9) BS02 ZN N/A GO:0000028 ... P35997 N/A
    852892 8p9a:d8 (2.9) BS01 rna N/A GO:0000028 ... Q3E7X9 N/A
    852893 8p9a:d9 (2.9) BS01 rna N/A GO:0002181 ... P41057 N/A
    852894 8p9a:d9 (2.9) BS02 ZN N/A GO:0002181 ... P41057 N/A
    852895 8p9a:e (2.9) BS01 rna N/A GO:0002181 ... P41057 N/A
    852896 8p9a:e (2.9) BS02 ZN N/A GO:0002181 ... P41057 N/A
    852897 8p9a:e (2.9) BS03 OHX N/A GO:0002181 ... P41057 N/A
    852898 8p9a:e0 (2.9) BS01 rna N/A GO:0002181 ... P0CX33 N/A
    852899 8p9a:e1 (2.9) BS01 rna N/A GO:0000028 ... P05759 N/A
    852900 8p9a:e1 (2.9) BS02 ZN N/A GO:0000028 ... P05759 N/A
    852901 8p9a:f (2.9) BS01 rna N/A GO:0002181 ... P0CX33 N/A
    852902 8p9a:g (2.9) BS01 rna N/A GO:0000028 ... P05759 N/A
    852903 8p9a:g (2.9) BS02 ZN N/A GO:0000028 ... P05759 N/A
    852904 8p9a:h (2.9) BS01 rna N/A GO:0001965 ... P38011 N/A
    852905 8p9a:i (2.9) BS01 rna N/A GO:0000723 ... P39015 N/A
    852906 8p9a:i (2.9) BS02 rna N/A GO:0000723 ... P39015 N/A
    852907 8p9a:i (2.9) BS03 MG N/A GO:0000723 ... P39015 N/A
    852908 8p9a:j (2.9) BS01 rna N/A GO:0002181 ... P0CX45 N/A
    852909 8p9a:j (2.9) BS02 rna N/A GO:0002181 ... P0CX45 N/A
    852910 8p9a:j (2.9) BS03 MG N/A GO:0002181 ... P0CX45 N/A
    852911 8p9a:j (2.9) BS04 MG N/A GO:0002181 ... P0CX45 N/A
    852912 8p9a:k (2.9) BS01 rna N/A GO:0000027 ... P14126 N/A
    852913 8p9a:k (2.9) BS02 OHX N/A GO:0000027 ... P14126 N/A
    852914 8p9a:l (2.9) BS01 rna N/A GO:0002181 ... P10664 N/A
    852915 8p9a:l (2.9) BS02 rna N/A GO:0002181 ... P10664 N/A
    852916 8p9a:l (2.9) BS03 MG N/A GO:0002181 ... P10664 N/A
    852917 8p9a:l (2.9) BS04 OHX N/A GO:0002181 ... P10664 N/A
    852918 8p9a:m (2.9) BS01 rna N/A GO:0000027 ... P26321 N/A
    852919 8p9a:m (2.9) BS02 rna N/A GO:0000027 ... P26321 N/A
    852920 8p9a:n (2.9) BS01 rna N/A GO:0000027 ... Q02326 N/A
    852921 8p9a:o (2.9) BS01 rna N/A GO:0000463 ... P05737 N/A
    852922 8p9a:o (2.9) BS02 rna N/A GO:0000463 ... P05737 N/A
    852923 8p9a:p (2.9) BS01 rna N/A GO:0000470 ... P17076 N/A
    852924 8p9a:p (2.9) BS02 rna N/A GO:0000470 ... P17076 N/A
    852925 8p9a:p0 (2.9) BS01 rna N/A GO:0000027 ... P05317 N/A
    852926 8p9a:q (2.9) BS01 rna N/A GO:0002181 ... P05738 N/A
    852927 8p9a:r (2.9) BS01 rna N/A GO:0000027 ... P41805 N/A
    852928 8p9a:r (2.9) BS02 rna N/A GO:0000027 ... P41805 N/A
    852929 8p9a:r (2.9) BS03 MG N/A GO:0000027 ... P41805 N/A
    852930 8p9a:r (2.9) BS04 OHX N/A GO:0000027 ... P41805 N/A
    852931 8p9a:s (2.9) BS01 rna N/A GO:0000027 ... P0C0W9 N/A
    852932 8p9a:s (2.9) BS02 rna N/A GO:0000027 ... P0C0W9 N/A
    852933 8p9a:s (2.9) BS03 MG N/A GO:0000027 ... P0C0W9 N/A
    852934 8p9a:s0 (2.9) BS01 rna N/A GO:0000028 ... P32905 N/A
    852935 8p9a:s1 (2.9) BS01 rna N/A GO:0000462 ... P33442 N/A
    852936 8p9a:s1 (2.9) BS02 rna N/A GO:0000462 ... P33442 N/A
    852937 8p9a:s1 (2.9) BS03 OHX N/A GO:0000462 ... P33442 N/A
    852938 8p9a:s2 (2.9) BS01 rna N/A GO:0000054 ... P25443 N/A
    852939 8p9a:s3 (2.9) BS01 rna N/A GO:0000054 ... P05750 N/A
    852940 8p9a:s4 (2.9) BS01 rna N/A GO:0002181 ... P0CX35 N/A
    852941 8p9a:s4 (2.9) BS02 OHX N/A GO:0002181 ... P0CX35 N/A
    852942 8p9a:s4 (2.9) BS03 MG N/A GO:0002181 ... P0CX35 N/A
    852943 8p9a:s5 (2.9) BS01 rna N/A GO:0000028 ... P26783 N/A
    852944 8p9a:s6 (2.9) BS01 rna N/A GO:0000462 ... P0CX37 N/A
    852945 8p9a:s6 (2.9) BS02 MG N/A GO:0000462 ... P0CX37 N/A
    852946 8p9a:s7 (2.9) BS01 rna N/A GO:0002181 ... P26786 N/A
    852947 8p9a:s8 (2.9) BS01 rna N/A GO:0000462 ... P0CX39 N/A
    852948 8p9a:s8 (2.9) BS02 rna N/A GO:0000462 ... P0CX39 N/A
    852949 8p9a:s8 (2.9) BS03 OHX N/A GO:0000462 ... P0CX39 N/A
    852950 8p9a:s9 (2.9) BS01 rna N/A GO:0000462 ... O13516 N/A
    852951 8p9a:sM (2.9) BS01 rna N/A GO:0000723 ... P39015 N/A
    852952 8p9a:sM (2.9) BS02 rna N/A GO:0000723 ... P39015 N/A
    852953 8p9a:sM (2.9) BS03 MG N/A GO:0000723 ... P39015 N/A
    852954 8p9a:t (2.9) BS01 rna N/A GO:0002181 ... Q12690 N/A
    852955 8p9a:t (2.9) BS02 rna N/A GO:0002181 ... Q12690 N/A
    852956 8p9a:u (2.9) BS01 rna N/A GO:0000027 ... P36105 N/A
    852957 8p9a:v (2.9) BS01 rna N/A GO:0002181 ... P05748 N/A
    852958 8p9a:v (2.9) BS02 rna N/A GO:0002181 ... P05748 N/A
    852959 8p9a:v (2.9) BS03 OHX N/A GO:0002181 ... P05748 N/A
    852960 8p9a:v (2.9) BS04 OHX N/A GO:0002181 ... P05748 N/A
    852961 8p9a:w (2.9) BS01 rna N/A GO:0000470 ... P26784 N/A
    852962 8p9a:x (2.9) BS01 rna N/A GO:0000448 ... P05740 N/A
    852963 8p9a:x (2.9) BS02 rna N/A GO:0000448 ... P05740 N/A
    852964 8p9a:x (2.9) BS03 MG N/A GO:0000448 ... P05740 N/A
    852965 8p9a:x (2.9) BS04 OHX N/A GO:0000448 ... P05740 N/A
    852966 8p9a:y (2.9) BS01 rna N/A GO:0002181 ... P0CX49 N/A
    852967 8p9a:z (2.9) BS01 rna N/A GO:0002181 ... P0CX82 N/A
    852968 8p9a:z (2.9) BS02 rna N/A GO:0002181 ... P0CX82 N/A
    852969 8p9a:z (2.9) BS03 OHX N/A GO:0002181 ... P0CX82 N/A
    852970 8p9b:A (2.59) BS01 ZN 2.7.11.1 GO:0004672 ... Q9HBH9 N/A
    852971 8p9b:A (2.59) BS02 X8K 2.7.11.1 GO:0004672 ... Q9HBH9 N/A
    852972 8p9f:A (1.3) BS01 X9O ? N/A O60885 38291964
    852973 8p9g:A (1.1) BS01 X9K ? N/A O60885 38291964
    852974 8p9h:A (1.19) BS01 X9C ? N/A O60885 38291964
    852975 8p9i:A (1.23) BS01 X8T ? N/A O60885 38291964
    852976 8p9i:B (1.23) BS01 X8T ? N/A O60885 38291964
    852977 8p9i:B (1.23) BS02 X8T ? N/A O60885 38291964
    852978 8p9j:A (1.42) BS01 X8O ? N/A O60885 38291964
    852979 8p9k:A (1.25) BS01 X9U ? N/A O60885 38291964
    852980 8p9l:A (1.29) BS01 XA3 ? N/A O60885 38291964
    852981 8p9o:A (2.45) BS01 peptide ? GO:0003677 ... G0SF70 38223238
    852982 8p9p:A (1.14) BS01 ZN N/A N/A Q9XAY4 N/A
    852983 8p9p:A (1.14) BS02 ZN N/A N/A Q9XAY4 N/A
    852984 8p9p:A (1.14) BS03 XB4 N/A N/A Q9XAY4 N/A
    852985 8p9q:A (1.08) BS01 ZN N/A N/A Q9XAY4 N/A
    852986 8p9q:A (1.08) BS02 ZN N/A N/A Q9XAY4 N/A
    852987 8p9q:A (1.08) BS03 XC6 N/A N/A Q9XAY4 N/A
    852988 8p9r:A (1.52) BS01 peptide ? GO:0022857 ... P0ABV2 38184686
    852989 8p9r:B (1.52) BS01 peptide ? GO:0022857 ... P0ABV2 38184686
    852990 8p9s:A (1.2) BS01 ZN N/A N/A Q9XAY4 N/A
    852991 8p9s:A (1.2) BS02 ZN N/A N/A Q9XAY4 N/A
    852992 8p9s:A (1.2) BS03 XCB N/A N/A Q9XAY4 N/A
    852993 8p9t:A (1.2) BS01 ZN N/A N/A Q9XAY4 N/A
    852994 8p9t:A (1.2) BS02 ZN N/A N/A Q9XAY4 N/A
    852995 8p9t:A (1.2) BS03 XCQ N/A N/A Q9XAY4 N/A
    852996 8p9u:A (2.0) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    852997 8p9u:A (2.0) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    852998 8p9u:A (2.0) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    852999 8p9u:A (2.0) BS04 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853000 8p9u:A (2.0) BS05 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).