SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    853001 8ovd:M (2.3) BS01 peptide N/A GO:0004497 ... A0R051 38902248
    853002 8ovd:M (2.3) BS02 FES N/A GO:0004497 ... A0R051 38902248
    853003 8ovd:M (2.3) BS03 IZL N/A GO:0004497 ... A0R051 38902248
    853004 8ovd:M (2.3) BS04 9YF N/A GO:0004497 ... A0R051 38902248
    853005 8ovd:M (2.3) BS05 MQ9 N/A GO:0004497 ... A0R051 38902248
    853006 8ovd:M (2.3) BS06 MQ9 N/A GO:0004497 ... A0R051 38902248
    853007 8ovd:M (2.3) BS07 9YF N/A GO:0004497 ... A0R051 38902248
    853008 8ovd:N (2.3) BS01 peptide N/A GO:0005886 ... A0R052 38902248
    853009 8ovd:N (2.3) BS02 MQ9 N/A GO:0005886 ... A0R052 38902248
    853010 8ovd:N (2.3) BS03 IZL N/A GO:0005886 ... A0R052 38902248
    853011 8ovd:N (2.3) BS04 HEM N/A GO:0005886 ... A0R052 38902248
    853012 8ovd:N (2.3) BS05 MQ9 N/A GO:0005886 ... A0R052 38902248
    853013 8ovd:N (2.3) BS06 MQ9 N/A GO:0005886 ... A0R052 38902248
    853014 8ovd:N (2.3) BS07 HEM N/A GO:0005886 ... A0R052 38902248
    853015 8ovd:N (2.3) BS08 MQ9 N/A GO:0005886 ... A0R052 38902248
    853016 8ovd:N (2.3) BS09 MQ9 N/A GO:0005886 ... A0R052 38902248
    853017 8ovd:N (2.3) BS10 9YF N/A GO:0005886 ... A0R052 38902248
    853018 8ovd:N (2.3) BS11 9XX N/A GO:0005886 ... A0R052 38902248
    853019 8ovd:N (2.3) BS12 MQ9 N/A GO:0005886 ... A0R052 38902248
    853020 8ovd:N (2.3) BS13 9YF N/A GO:0005886 ... A0R052 38902248
    853021 8ovd:O (2.3) BS01 HEC N/A GO:0005506 ... A0R050 38902248
    853022 8ovd:O (2.3) BS02 HEC N/A GO:0005506 ... A0R050 38902248
    853023 8ovd:O (2.3) BS03 MQ9 N/A GO:0005506 ... A0R050 38902248
    853024 8ovd:O (2.3) BS04 WUO N/A GO:0005506 ... A0R050 38902248
    853025 8ovd:O (2.3) BS05 MQ9 N/A GO:0005506 ... A0R050 38902248
    853026 8ovd:P (2.3) BS01 WUO N/A N/A A0QVH4 38902248
    853027 8ovd:P (2.3) BS02 9YF N/A N/A A0QVH4 38902248
    853028 8ovd:Q (2.3) BS01 CU N/A GO:0004129 ... A0R057 38902248
    853029 8ovd:Q (2.3) BS02 CU N/A GO:0004129 ... A0R057 38902248
    853030 8ovd:R (2.3) BS01 MQ9 N/A GO:0004129 ... N/A 38902248
    853031 8ovd:R (2.3) BS02 HEA N/A GO:0004129 ... N/A 38902248
    853032 8ovd:R (2.3) BS03 HEA N/A GO:0004129 ... N/A 38902248
    853033 8ovd:R (2.3) BS04 CU N/A GO:0004129 ... N/A 38902248
    853034 8ovd:R (2.3) BS05 CA N/A GO:0004129 ... N/A 38902248
    853035 8ovd:R (2.3) BS06 9XX N/A GO:0004129 ... N/A 38902248
    853036 8ovd:T (2.3) BS01 WUO N/A GO:0004129 ... A0R056 38902248
    853037 8ovd:T (2.3) BS02 MQ9 N/A GO:0004129 ... A0R056 38902248
    853038 8ovd:W (2.3) BS01 HEC N/A N/A A0R562 38902248
    853039 8ovd:W (2.3) BS02 WUO N/A N/A A0R562 38902248
    853040 8ovd:W (2.3) BS03 9YF N/A N/A A0R562 38902248
    853041 8ovd:X (2.3) BS01 CU N/A GO:0004129 ... A0R057 38902248
    853042 8ovd:X (2.3) BS02 CU N/A GO:0004129 ... A0R057 38902248
    853043 8ovd:b (2.3) BS01 peptide N/A N/A A0R562 38902248
    853044 8ovd:b (2.3) BS02 HEC N/A N/A A0R562 38902248
    853045 8ovd:b (2.3) BS03 WUO N/A N/A A0R562 38902248
    853046 8ovd:b (2.3) BS04 9YF N/A N/A A0R562 38902248
    853047 8ove:A0 (2.6) BS01 rna ? GO:0003729 ... Q38BK6 37985661
    853048 8ove:A1 (2.6) BS01 rna ? GO:0003723 ... Q386F2 37985661
    853049 8ove:A2 (2.6) BS01 rna ? GO:0003723 ... Q385D9 37985661
    853050 8ove:A3 (2.6) BS01 rna ? GO:0001558 ... Q38CL9 37985661
    853051 8ove:A4 (2.6) BS01 rna ? GO:0003735 ... Q38FD9 37985661
    853052 8ove:A5 (2.6) BS01 rna ? GO:0002181 ... Q57YL6 37985661
    853053 8ove:A5 (2.6) BS02 rna ? GO:0002181 ... Q57YL6 37985661
    853054 8ove:A5 (2.6) BS03 MG ? GO:0002181 ... Q57YL6 37985661
    853055 8ove:A6 (2.6) BS01 rna ? GO:0003723 ... P17959 37985661
    853056 8ove:A7 (2.6) BS01 rna ? GO:0003729 ... P69103 37985661
    853057 8ove:A8 (2.6) BS01 rna N/A GO:0003735 ... N/A 37985661
    853058 8ove:AC (2.6) BS01 rna ? GO:0000028 ... Q383I8 37985661
    853059 8ove:AD (2.6) BS01 rna ? GO:0003723 ... Q38B66 37985661
    853060 8ove:AE (2.6) BS01 rna ? GO:0000314 ... Q38CI4 37985661
    853061 8ove:AG (2.6) BS01 rna ? GO:0000462 ... Q586C2 37985661
    853062 8ove:AH (2.6) BS01 rna ? GO:0003735 ... P19800 37985661
    853063 8ove:AI (2.6) BS01 rna ? GO:0003723 ... Q57XN7 37985661
    853064 8ove:AJ (2.6) BS01 rna ? GO:0000314 ... Q580K6 37985661
    853065 8ove:AK (2.6) BS01 rna ? GO:0000462 ... Q57VV0 37985661
    853066 8ove:AL (2.6) BS01 rna ? GO:0003735 ... Q382Z8 37985661
    853067 8ove:AM (2.6) BS01 rna ? GO:0000314 ... Q38B69 37985661
    853068 8ove:AO (2.6) BS01 rna ? GO:0003735 ... Q583K7 37985661
    853069 8ove:AP (2.6) BS01 rna ? GO:0003723 ... Q388D3 37985661
    853070 8ove:AQ (2.6) BS01 rna N/A GO:0003735 ... N/A 37985661
    853071 8ove:AS (2.6) BS01 rna ? GO:0003735 ... Q38CD1 37985661
    853072 8ove:AT (2.6) BS01 rna ? GO:0002181 ... Q38AM9 37985661
    853073 8ove:AU (2.6) BS01 rna ? GO:0003735 ... Q57XX0 37985661
    853074 8ove:AV (2.6) BS01 rna ? GO:0003729 ... Q384J9 37985661
    853075 8ove:AW (2.6) BS01 rna ? GO:0003735 ... Q383V7 37985661
    853076 8ove:AX (2.6) BS01 rna ? GO:0003723 ... Q38EW1 37985661
    853077 8ove:AY (2.6) BS01 rna ? GO:0003735 ... Q584U5 37985661
    853078 8ove:AZ (2.6) BS01 rna ? GO:0000028 ... Q57U30 37985661
    853079 8ove:Az (2.6) BS01 rna ? GO:0003676 ... Q382D5 37985661
    853080 8ove:BI (2.6) BS01 rna ? GO:0002181 ... P50885 37985661
    853081 8ove:BI (2.6) BS02 rna ? GO:0002181 ... P50885 37985661
    853082 8ove:BK (2.6) BS01 rna ? GO:0003735 ... Q38EC5 37985661
    853083 8ove:BK (2.6) BS02 rna ? GO:0003735 ... Q38EC5 37985661
    853084 8ove:BK (2.6) BS03 rna ? GO:0003735 ... Q38EC5 37985661
    853085 8ove:BL (2.6) BS01 rna ? GO:0003723 ... Q38EI9 37985661
    853086 8ove:BL (2.6) BS02 rna ? GO:0003723 ... Q38EI9 37985661
    853087 8ove:BN (2.6) BS01 rna ? GO:0003723 ... Q57V55 37985661
    853088 8ove:BN (2.6) BS02 rna ? GO:0003723 ... Q57V55 37985661
    853089 8ove:BN (2.6) BS03 rna ? GO:0003723 ... Q57V55 37985661
    853090 8ove:BO (2.6) BS01 rna ? GO:0003729 ... Q585J5 37985661
    853091 8ove:BO (2.6) BS02 rna ? GO:0003729 ... Q585J5 37985661
    853092 8ove:BO (2.6) BS03 rna ? GO:0003729 ... Q585J5 37985661
    853093 8ove:BO (2.6) BS04 rna ? GO:0003729 ... Q585J5 37985661
    853094 8ove:BP (2.6) BS01 rna ? GO:0003723 ... Q383F5 37985661
    853095 8ove:BP (2.6) BS02 rna ? GO:0003723 ... Q383F5 37985661
    853096 8ove:BP (2.6) BS03 rna ? GO:0003723 ... Q383F5 37985661
    853097 8ove:BQ (2.6) BS01 rna ? GO:0002181 ... Q38CY7 37985661
    853098 8ove:BQ (2.6) BS02 rna ? GO:0002181 ... Q38CY7 37985661
    853099 8ove:BQ (2.6) BS03 rna ? GO:0002181 ... Q38CY7 37985661
    853100 8ove:BR (2.6) BS01 rna ? GO:0002181 ... Q385T6 37985661
    853101 8ove:BR (2.6) BS02 rna ? GO:0002181 ... Q385T6 37985661
    853102 8ove:BR (2.6) BS03 rna ? GO:0002181 ... Q385T6 37985661
    853103 8ove:BR (2.6) BS04 rna ? GO:0002181 ... Q385T6 37985661
    853104 8ove:BR (2.6) BS05 rna ? GO:0002181 ... Q385T6 37985661
    853105 8ove:BS (2.6) BS01 rna ? GO:0002181 ... Q382C4 37985661
    853106 8ove:BS (2.6) BS02 rna ? GO:0002181 ... Q382C4 37985661
    853107 8ove:BS (2.6) BS03 rna ? GO:0002181 ... Q382C4 37985661
    853108 8ove:BT (2.6) BS01 rna ? GO:0003723 ... Q57ZI7 37985661
    853109 8ove:BT (2.6) BS02 rna ? GO:0003723 ... Q57ZI7 37985661
    853110 8ove:BT (2.6) BS03 rna ? GO:0003723 ... Q57ZI7 37985661
    853111 8ove:BT (2.6) BS04 rna ? GO:0003723 ... Q57ZI7 37985661
    853112 8ove:BT (2.6) BS05 rna ? GO:0003723 ... Q57ZI7 37985661
    853113 8ove:BU (2.6) BS01 rna ? GO:0003735 ... Q4FKD4 37985661
    853114 8ove:BU (2.6) BS02 rna ? GO:0003735 ... Q4FKD4 37985661
    853115 8ove:BU (2.6) BS03 rna ? GO:0003735 ... Q4FKD4 37985661
    853116 8ove:BV (2.6) BS01 rna ? GO:0002181 ... Q383R3 37985661
    853117 8ove:BV (2.6) BS02 rna ? GO:0002181 ... Q383R3 37985661
    853118 8ove:BV (2.6) BS03 rna ? GO:0002181 ... Q383R3 37985661
    853119 8ove:BW (2.6) BS01 rna ? GO:0003735 ... Q38DP2 37985661
    853120 8ove:BW (2.6) BS02 rna ? GO:0003735 ... Q38DP2 37985661
    853121 8ove:BX (2.6) BS01 rna ? GO:0003735 ... P41165 37985661
    853122 8ove:BX (2.6) BS02 rna ? GO:0003735 ... P41165 37985661
    853123 8ove:BX (2.6) BS03 rna ? GO:0003735 ... P41165 37985661
    853124 8ove:BY (2.6) BS01 rna ? GO:0002181 ... O77067 37985661
    853125 8ove:BY (2.6) BS02 rna ? GO:0002181 ... O77067 37985661
    853126 8ove:BZ (2.6) BS01 rna ? GO:0002181 ... Q38D25 37985661
    853127 8ove:BZ (2.6) BS02 rna ? GO:0002181 ... Q38D25 37985661
    853128 8ove:Ba (2.6) BS01 rna ? GO:0003735 ... Q381J6 37985661
    853129 8ove:Ba (2.6) BS02 rna ? GO:0003735 ... Q381J6 37985661
    853130 8ove:Bb (2.6) BS01 rna ? GO:0003735 ... Q38DN9 37985661
    853131 8ove:Bb (2.6) BS02 rna ? GO:0003735 ... Q38DN9 37985661
    853132 8ove:Bc (2.6) BS01 rna ? GO:0003729 ... Q385E9 37985661
    853133 8ove:Bd (2.6) BS01 rna ? GO:0002181 ... Q383S6 37985661
    853134 8ove:Bd (2.6) BS02 rna ? GO:0002181 ... Q383S6 37985661
    853135 8ove:Be (2.6) BS01 rna ? GO:0002181 ... Q57W56 37985661
    853136 8ove:Be (2.6) BS02 rna ? GO:0002181 ... Q57W56 37985661
    853137 8ove:Be (2.6) BS03 rna ? GO:0002181 ... Q57W56 37985661
    853138 8ove:Bf (2.6) BS01 rna ? GO:0003723 ... Q581Q1 37985661
    853139 8ove:Bf (2.6) BS02 rna ? GO:0003723 ... Q581Q1 37985661
    853140 8ove:Bf (2.6) BS03 rna ? GO:0003723 ... Q581Q1 37985661
    853141 8ove:Bf (2.6) BS04 rna ? GO:0003723 ... Q581Q1 37985661
    853142 8ove:Bg (2.6) BS01 rna ? GO:0003723 ... P49153 37985661
    853143 8ove:Bh (2.6) BS01 rna ? GO:0002181 ... Q38DH8 37985661
    853144 8ove:Bh (2.6) BS02 rna ? GO:0002181 ... Q38DH8 37985661
    853145 8ove:Bh (2.6) BS03 rna ? GO:0002181 ... Q38DH8 37985661
    853146 8ove:Bh (2.6) BS04 rna ? GO:0002181 ... Q38DH8 37985661
    853147 8ove:Bi (2.6) BS01 rna ? GO:0003735 ... Q38CL1 37985661
    853148 8ove:Bj (2.6) BS01 rna ? GO:0003735 ... Q383V6 37985661
    853149 8ove:Bj (2.6) BS02 rna ? GO:0003735 ... Q383V6 37985661
    853150 8ove:Bj (2.6) BS03 rna ? GO:0003735 ... Q383V6 37985661
    853151 8ove:Bk (2.6) BS01 rna ? GO:0000463 ... Q38FW8 37985661
    853152 8ove:Bk (2.6) BS02 rna ? GO:0000463 ... Q38FW8 37985661
    853153 8ove:Bl (2.6) BS01 rna ? GO:0002181 ... Q584G9 37985661
    853154 8ove:Bl (2.6) BS02 rna ? GO:0002181 ... Q584G9 37985661
    853155 8ove:Bl (2.6) BS03 rna ? GO:0002181 ... Q584G9 37985661
    853156 8ove:Bm (2.6) BS01 rna ? GO:0002181 ... Q38CY6 37985661
    853157 8ove:Bm (2.6) BS02 rna ? GO:0002181 ... Q38CY6 37985661
    853158 8ove:Bn (2.6) BS01 rna ? GO:0000448 ... Q386L1 37985661
    853159 8ove:Bn (2.6) BS02 rna ? GO:0000448 ... Q386L1 37985661
    853160 8ove:Bn (2.6) BS03 rna ? GO:0000448 ... Q386L1 37985661
    853161 8ove:Bo (2.6) BS01 rna ? GO:0003735 ... Q38AW9 37985661
    853162 8ove:Bo (2.6) BS02 rna ? GO:0003735 ... Q38AW9 37985661
    853163 8ove:Bo (2.6) BS03 rna ? GO:0003735 ... Q38AW9 37985661
    853164 8ove:Bp (2.6) BS01 rna ? GO:0002181 ... Q38FV6 37985661
    853165 8ove:Bp (2.6) BS02 rna ? GO:0002181 ... Q38FV6 37985661
    853166 8ove:Bp (2.6) BS03 rna ? GO:0002181 ... Q38FV6 37985661
    853167 8ove:Bq (2.6) BS01 rna ? GO:0002181 ... Q57UJ8 37985661
    853168 8ove:Bq (2.6) BS02 rna ? GO:0002181 ... Q57UJ8 37985661
    853169 8ove:Bq (2.6) BS03 rna ? GO:0002181 ... Q57UJ8 37985661
    853170 8ove:Br (2.6) BS01 rna ? GO:0003723 ... Q582N2 37985661
    853171 8ove:Br (2.6) BS02 rna ? GO:0003723 ... Q582N2 37985661
    853172 8ove:Br (2.6) BS03 rna ? GO:0003723 ... Q582N2 37985661
    853173 8ove:Bs (2.6) BS01 rna ? GO:0003735 ... P21899 37985661
    853174 8ove:Bt (2.6) BS01 rna ? GO:0003735 ... P17843 37985661
    853175 8ove:Bt (2.6) BS02 rna ? GO:0003735 ... P17843 37985661
    853176 8ove:Bt (2.6) BS03 rna ? GO:0003735 ... P17843 37985661
    853177 8ove:Bu (2.6) BS01 rna ? GO:0000027 ... Q38CY8 37985661
    853178 8ove:Bu (2.6) BS02 rna ? GO:0000027 ... Q38CY8 37985661
    853179 8ove:Bu (2.6) BS03 rna ? GO:0000027 ... Q38CY8 37985661
    853180 8ove:Bv (2.6) BS01 rna ? GO:0000315 ... Q389K1 37985661
    853181 8ove:Bv (2.6) BS02 rna ? GO:0000315 ... Q389K1 37985661
    853182 8ove:Bw (2.6) BS01 rna ? GO:0000463 ... Q57V35 37985661
    853183 8ove:Bw (2.6) BS02 rna ? GO:0000463 ... Q57V35 37985661
    853184 8ove:Bx (2.6) BS01 rna ? GO:0000470 ... Q57VM1 37985661
    853185 8ove:Bx (2.6) BS02 rna ? GO:0000470 ... Q57VM1 37985661
    853186 8ove:Bx (2.6) BS03 rna ? GO:0000470 ... Q57VM1 37985661
    853187 8ove:By (2.6) BS01 rna ? GO:0002181 ... Q38CD0 37985661
    853188 8ove:By (2.6) BS02 rna ? GO:0002181 ... Q38CD0 37985661
    853189 8ove:By (2.6) BS03 rna ? GO:0002181 ... Q38CD0 37985661
    853190 8ove:Bz (2.6) BS01 rna N/A GO:0003735 ... N/A 37985661
    853191 8ove:Bz (2.6) BS02 rna N/A GO:0003735 ... N/A 37985661
    853192 8ovf:A (7.23) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 38688959
    853193 8ovf:B (7.23) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 38688959
    853194 8ovf:C (7.23) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 38688959
    853195 8ovf:D (7.23) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 38688959
    853196 8ovf:E (7.23) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 38688959
    853197 8ovf:F (7.23) BS01 ADP 3.4.21.53 GO:0004176 ... P36776 38688959
    853198 8ovh:A (2.171) BS01 PLP 2.5.1.47
    2.5.1.49
    GO:0000103 ... P06106 37235813
    853199 8ovh:B (2.171) BS01 PLP 2.5.1.47
    2.5.1.49
    GO:0000103 ... P06106 37235813
    853200 8ovh:C (2.171) BS01 PLP 2.5.1.47
    2.5.1.49
    GO:0000103 ... P06106 37235813

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).