SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    853001 8p9u:B (2.0) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853002 8p9u:B (2.0) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853003 8p9u:B (2.0) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853004 8p9u:B (2.0) BS04 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853005 8p9u:B (2.0) BS05 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853006 8p9u:C (2.0) BS01 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853007 8p9u:C (2.0) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853008 8p9u:C (2.0) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853009 8p9u:C (2.0) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853010 8p9u:C (2.0) BS05 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853011 8p9u:C (2.0) BS06 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853012 8p9u:D (2.0) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853013 8p9u:D (2.0) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853014 8p9u:D (2.0) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853015 8p9u:D (2.0) BS04 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853016 8p9u:E (2.0) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853017 8p9u:E (2.0) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853018 8p9u:E (2.0) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853019 8p9u:E (2.0) BS04 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853020 8p9u:F (2.0) BS01 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853021 8p9u:F (2.0) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853022 8p9u:F (2.0) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853023 8p9u:F (2.0) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853024 8p9u:F (2.0) BS05 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853025 8p9v:A (2.2) BS01 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853026 8p9v:A (2.2) BS02 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853027 8p9v:A (2.2) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853028 8p9v:A (2.2) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853029 8p9v:A (2.2) BS05 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853030 8p9v:A (2.2) BS06 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853031 8p9v:B (2.2) BS01 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853032 8p9v:B (2.2) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853033 8p9v:B (2.2) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853034 8p9v:B (2.2) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853035 8p9v:B (2.2) BS05 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853036 8p9v:C (2.2) BS01 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853037 8p9v:C (2.2) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853038 8p9v:C (2.2) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853039 8p9v:C (2.2) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853040 8p9v:D (2.2) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853041 8p9v:D (2.2) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853042 8p9v:D (2.2) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853043 8p9v:D (2.2) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853044 8p9v:D (2.2) BS05 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853045 8p9v:E (2.2) BS01 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853046 8p9v:E (2.2) BS02 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853047 8p9v:E (2.2) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853048 8p9v:F (2.2) BS01 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853049 8p9v:F (2.2) BS02 OXY 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853050 8p9v:F (2.2) BS03 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853051 8p9v:F (2.2) BS04 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853052 8p9v:F (2.2) BS05 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853053 8p9v:F (2.2) BS06 CU 1.10.3.2 GO:0005507 ... A0A0M4FJ81 37569288
    853054 8p9w:A (2.9) BS01 peptide N/A GO:0003677 ... Q9PTN2 38982588
    853055 8p9w:A (2.9) BS02 XDO N/A GO:0003677 ... Q9PTN2 38982588
    853056 8p9x:A (2.15) BS01 peptide N/A GO:0003677 ... Q9PTN2 38982588
    853057 8p9x:A (2.15) BS02 FO6 N/A GO:0003677 ... Q9PTN2 38982588
    853058 8p9y:C (4.3) BS01 XIO ? GO:0005515 ... P0DTC2 37471688
    853059 8pa2:A (2.1) BS01 NAD N/A GO:0000166 ... Q5SLC4 N/A
    853060 8pa2:B (2.1) BS01 NAD N/A GO:0000166 ... Q5SLC4 N/A
    853061 8pa2:C (2.1) BS01 NAD N/A GO:0000166 ... Q5SLC4 N/A
    853062 8pa2:D (2.1) BS01 NAD N/A GO:0000166 ... Q5SLC4 N/A
    853063 8pa3:A (1.07) BS01 ZN N/A N/A Q9XAY4 N/A
    853064 8pa3:A (1.07) BS02 ZN N/A N/A Q9XAY4 N/A
    853065 8pa3:A (1.07) BS03 XNT N/A N/A Q9XAY4 N/A
    853066 8pa4:A (1.11) BS01 ZN N/A N/A Q9XAY4 N/A
    853067 8pa4:A (1.11) BS02 ZN N/A N/A Q9XAY4 N/A
    853068 8pa4:A (1.11) BS03 XN6 N/A N/A Q9XAY4 N/A
    853069 8pa5:A (1.1) BS01 ZN N/A N/A Q9XAY4 N/A
    853070 8pa5:A (1.1) BS02 ZN N/A N/A Q9XAY4 N/A
    853071 8pa5:A (1.1) BS03 XMZ N/A N/A Q9XAY4 N/A
    853072 8pa6:A (1.58) BS01 XKB 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 N/A
    853073 8pa6:B (1.58) BS01 XKB 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 N/A
    853074 8pa7:A (1.1) BS01 ZN N/A N/A Q9XAY4 N/A
    853075 8pa7:A (1.1) BS02 ZN N/A N/A Q9XAY4 N/A
    853076 8pa7:A (1.1) BS03 XMN N/A N/A Q9XAY4 N/A
    853077 8pa8:A (1.32) BS01 ZN N/A N/A Q9XAY4 N/A
    853078 8pa8:A (1.32) BS02 ZN N/A N/A Q9XAY4 N/A
    853079 8pa8:A (1.32) BS03 XLZ N/A N/A Q9XAY4 N/A
    853080 8pa9:A (1.5) BS01 XKF 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 N/A
    853081 8paa:A (1.1) BS01 ZN N/A N/A Q9XAY4 N/A
    853082 8paa:A (1.1) BS02 ZN N/A N/A Q9XAY4 N/A
    853083 8paa:A (1.1) BS03 XO0 N/A N/A Q9XAY4 N/A
    853084 8pac:A (1.1) BS01 ZN N/A N/A Q9XAY4 N/A
    853085 8pac:A (1.1) BS02 ZN N/A N/A Q9XAY4 N/A
    853086 8pac:A (1.1) BS03 XNE N/A N/A Q9XAY4 N/A
    853087 8pad:A (1.1) BS01 ZN N/A N/A Q9XAY4 N/A
    853088 8pad:A (1.1) BS02 ZN N/A N/A Q9XAY4 N/A
    853089 8pad:A (1.1) BS03 XMU N/A N/A Q9XAY4 N/A
    853090 8paf:A (2.1) BS01 XKK 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 N/A
    853091 8paf:B (2.1) BS01 XKK 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 N/A
    853092 8pah:A (1.1) BS01 ZN N/A N/A Q9XAY4 N/A
    853093 8pah:A (1.1) BS02 ZN N/A N/A Q9XAY4 N/A
    853094 8pah:A (1.1) BS03 XM8 N/A N/A Q9XAY4 N/A
    853095 8pai:A (1.8) BS01 XKO 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 N/A
    853096 8pal:A (1.25) BS01 ZN N/A N/A Q9XAY4 N/A
    853097 8pal:A (1.25) BS02 ZN N/A N/A Q9XAY4 N/A
    853098 8pal:A (1.25) BS03 XM8 N/A N/A Q9XAY4 N/A
    853099 8pam:A (1.25) BS01 ZN N/A N/A Q9XAY4 N/A
    853100 8pam:A (1.25) BS02 ZN N/A N/A Q9XAY4 N/A
    853101 8pam:A (1.25) BS03 XZR N/A N/A Q9XAY4 N/A
    853102 8pan:A (1.25) BS01 ZN N/A N/A Q9XAY4 N/A
    853103 8pan:A (1.25) BS02 ZN N/A N/A Q9XAY4 N/A
    853104 8pan:A (1.25) BS03 XZL N/A N/A Q9XAY4 N/A
    853105 8pao:A (1.4) BS01 ZN N/A N/A Q9XAY4 N/A
    853106 8pao:A (1.4) BS02 ZN N/A N/A Q9XAY4 N/A
    853107 8pao:A (1.4) BS03 XZH N/A N/A Q9XAY4 N/A
    853108 8paq:A (1.6) BS01 CA 1.10.3.2 N/A A0A9P6DGH0 37483125
    853109 8par:A (2.0) BS01 XON N/A GO:0004672 ... Q92918 39331123
    853110 8pas:A (2.7) BS01 XOH N/A GO:0004672 ... Q92918 39331123
    853111 8pas:B (2.7) BS01 XOH N/A GO:0004672 ... Q92918 39331123
    853112 8pat:A (1.45) BS01 peptide ? GO:0003677 ... P0A988 38425897
    853113 8pau:A (2.8) BS01 XOR N/A GO:0004672 ... Q92918 39331123
    853114 8pau:B (2.8) BS01 XOR N/A GO:0004672 ... Q92918 39331123
    853115 8pav:A (1.9) BS01 XOZ N/A GO:0004672 ... Q13043 39331123
    853116 8pav:B (1.9) BS01 XOZ N/A GO:0004672 ... Q13043 39331123
    853117 8paw:A (2.14) BS01 ASP N/A GO:0004672 ... Q13043 39331123
    853118 8paw:A (2.14) BS02 XQL N/A GO:0004672 ... Q13043 39331123
    853119 8paw:B (2.14) BS01 XQL N/A GO:0004672 ... Q13043 39331123
    853120 8pay:A (1.21) BS01 peptide ? GO:0003677 ... P0A988 38425897
    853121 8paz:A (1.6) BS01 CU ? GO:0005507 ... P04377 9341204
    853122 8pb0:A (1.26) BS01 ZN N/A N/A Q9XAY4 N/A
    853123 8pb0:A (1.26) BS02 ZN N/A N/A Q9XAY4 N/A
    853124 8pb0:A (1.26) BS03 XQE N/A N/A Q9XAY4 N/A
    853125 8pb2:A (1.25) BS01 ZN N/A N/A Q9XAY4 N/A
    853126 8pb2:A (1.25) BS02 ZN N/A N/A Q9XAY4 N/A
    853127 8pb2:A (1.25) BS03 XQ5 N/A N/A Q9XAY4 N/A
    853128 8pb3:A (1.18) BS01 SAH 2.1.1.- GO:0005634 ... P0DPA9 38548735
    853129 8pb3:A (1.18) BS02 XP6 2.1.1.- GO:0005634 ... P0DPA9 38548735
    853130 8pb3:B (1.18) BS01 SAH 2.1.1.- GO:0005634 ... P0DPA9 38548735
    853131 8pb3:B (1.18) BS02 XP6 2.1.1.- GO:0005634 ... P0DPA9 38548735
    853132 8pb4:A (0.91) BS01 SAH 2.1.1.- GO:0005634 ... P0DPA9 38548735
    853133 8pb4:A (0.91) BS02 XP6 2.1.1.- GO:0005634 ... P0DPA9 38548735
    853134 8pb5:A (0.89) BS01 SFG 2.1.1.- GO:0005634 ... P0DPA9 38548735
    853135 8pb5:A (0.89) BS02 XP6 2.1.1.- GO:0005634 ... P0DPA9 38548735
    853136 8pb6:A (0.93) BS01 SAH 2.1.1.- GO:0005634 ... P0DPA9 38548735
    853137 8pb6:A (0.93) BS02 XPN 2.1.1.- GO:0005634 ... P0DPA9 38548735
    853138 8pb7:A (0.92) BS01 SFG 2.1.1.- GO:0005634 ... P0DPA9 38548735
    853139 8pb7:A (0.92) BS02 XPN 2.1.1.- GO:0005634 ... P0DPA9 38548735
    853140 8pb8:A (2.531) BS01 SAH 2.1.1.- GO:0005634 ... P0DPA9 38548735
    853141 8pb8:B (2.531) BS01 SAH 2.1.1.- GO:0005634 ... P0DPA9 38548735
    853142 8pb9:A (3.3) BS01 ACP ? GO:0005524 ... G3XD64 38051770
    853143 8pb9:A (3.3) BS02 ACP ? GO:0005524 ... G3XD64 38051770
    853144 8pb9:B (3.3) BS01 ACP ? GO:0005524 ... G3XD64 38051770
    853145 8pb9:D (3.3) BS01 C2E ? GO:0005524 ... G3XCV0 38051770
    853146 8pb9:D (3.3) BS02 C2E ? GO:0005524 ... G3XCV0 38051770
    853147 8pbb:B (2.49) BS01 CLF 1.18.6.1 GO:0009399 ... D5ANJ9 38062208
    853148 8pbb:D (2.49) BS01 CLF 1.18.6.1 GO:0009399 ... D5ANJ9 38062208
    853149 8pbc:A (2.61) BS01 peptide ? GO:0000150 ... Q06609 37919288
    853150 8pbc:A (2.61) BS02 dna ? GO:0000150 ... Q06609 37919288
    853151 8pbc:A (2.61) BS03 ATP ? GO:0000150 ... Q06609 37919288
    853152 8pbc:A (2.61) BS04 CA ? GO:0000150 ... Q06609 37919288
    853153 8pbc:A (2.61) BS05 CA ? GO:0000150 ... Q06609 37919288
    853154 8pbc:A (2.61) BS06 ATP ? GO:0000150 ... Q06609 37919288
    853155 8pbc:B (2.61) BS01 peptide ? GO:0000150 ... Q06609 37919288
    853156 8pbc:B (2.61) BS02 peptide ? GO:0000150 ... Q06609 37919288
    853157 8pbc:B (2.61) BS03 dna ? GO:0000150 ... Q06609 37919288
    853158 8pbc:B (2.61) BS04 ATP ? GO:0000150 ... Q06609 37919288
    853159 8pbc:B (2.61) BS05 CA ? GO:0000150 ... Q06609 37919288
    853160 8pbc:B (2.61) BS06 CA ? GO:0000150 ... Q06609 37919288
    853161 8pbc:B (2.61) BS07 ATP ? GO:0000150 ... Q06609 37919288
    853162 8pbc:C (2.61) BS01 peptide ? GO:0000150 ... Q06609 37919288
    853163 8pbc:C (2.61) BS02 peptide ? GO:0000150 ... Q06609 37919288
    853164 8pbc:C (2.61) BS03 dna ? GO:0000150 ... Q06609 37919288
    853165 8pbc:C (2.61) BS04 ATP ? GO:0000150 ... Q06609 37919288
    853166 8pbc:C (2.61) BS05 CA ? GO:0000150 ... Q06609 37919288
    853167 8pbc:C (2.61) BS06 CA ? GO:0000150 ... Q06609 37919288
    853168 8pbc:C (2.61) BS07 ATP ? GO:0000150 ... Q06609 37919288
    853169 8pbc:D (2.61) BS01 peptide ? GO:0000150 ... Q06609 37919288
    853170 8pbc:D (2.61) BS02 peptide ? GO:0000150 ... Q06609 37919288
    853171 8pbc:D (2.61) BS03 dna ? GO:0000150 ... Q06609 37919288
    853172 8pbc:D (2.61) BS04 ATP ? GO:0000150 ... Q06609 37919288
    853173 8pbc:D (2.61) BS05 CA ? GO:0000150 ... Q06609 37919288
    853174 8pbc:D (2.61) BS06 CA ? GO:0000150 ... Q06609 37919288
    853175 8pbc:D (2.61) BS07 ATP ? GO:0000150 ... Q06609 37919288
    853176 8pbc:E (2.61) BS01 peptide ? GO:0000150 ... Q06609 37919288
    853177 8pbc:E (2.61) BS02 peptide ? GO:0000150 ... Q06609 37919288
    853178 8pbc:E (2.61) BS03 dna ? GO:0000150 ... Q06609 37919288
    853179 8pbc:E (2.61) BS04 ATP ? GO:0000150 ... Q06609 37919288
    853180 8pbc:E (2.61) BS05 CA ? GO:0000150 ... Q06609 37919288
    853181 8pbc:E (2.61) BS06 CA ? GO:0000150 ... Q06609 37919288
    853182 8pbc:E (2.61) BS07 ATP ? GO:0000150 ... Q06609 37919288
    853183 8pbc:F (2.61) BS01 peptide ? GO:0000150 ... Q06609 37919288
    853184 8pbc:F (2.61) BS02 peptide ? GO:0000150 ... Q06609 37919288
    853185 8pbc:F (2.61) BS03 dna ? GO:0000150 ... Q06609 37919288
    853186 8pbc:F (2.61) BS04 ATP ? GO:0000150 ... Q06609 37919288
    853187 8pbc:F (2.61) BS05 CA ? GO:0000150 ... Q06609 37919288
    853188 8pbc:F (2.61) BS06 CA ? GO:0000150 ... Q06609 37919288
    853189 8pbc:F (2.61) BS07 ATP ? GO:0000150 ... Q06609 37919288
    853190 8pbc:G (2.61) BS01 peptide ? GO:0000150 ... Q06609 37919288
    853191 8pbc:G (2.61) BS02 peptide ? GO:0000150 ... Q06609 37919288
    853192 8pbc:G (2.61) BS03 dna ? GO:0000150 ... Q06609 37919288
    853193 8pbc:G (2.61) BS04 ATP ? GO:0000150 ... Q06609 37919288
    853194 8pbc:G (2.61) BS05 CA ? GO:0000150 ... Q06609 37919288
    853195 8pbc:G (2.61) BS06 CA ? GO:0000150 ... Q06609 37919288
    853196 8pbc:G (2.61) BS07 ATP ? GO:0000150 ... Q06609 37919288
    853197 8pbc:H (2.61) BS01 peptide ? GO:0000150 ... Q06609 37919288
    853198 8pbc:H (2.61) BS02 peptide ? GO:0000150 ... Q06609 37919288
    853199 8pbc:H (2.61) BS03 dna ? GO:0000150 ... Q06609 37919288
    853200 8pbc:H (2.61) BS04 ATP ? GO:0000150 ... Q06609 37919288

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).