SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    853201 8ovh:D (2.171) BS01 PLP 2.5.1.47
    2.5.1.49
    GO:0000103 ... P06106 37235813
    853202 8ovj:A (2.4) BS01 rna ? GO:0002181 ... Q4FWX5 38722744
    853203 8ovj:A (2.4) BS02 rna ? GO:0002181 ... Q4FWX5 38722744
    853204 8ovj:A (2.4) BS03 rna ? GO:0002181 ... Q4FWX5 38722744
    853205 8ovj:A (2.4) BS04 rna ? GO:0002181 ... Q4FWX5 38722744
    853206 8ovj:B (2.4) BS01 rna ? GO:0003723 ... Q4Q2Q6 38722744
    853207 8ovj:B (2.4) BS02 rna ? GO:0003723 ... Q4Q2Q6 38722744
    853208 8ovj:B (2.4) BS03 rna ? GO:0003723 ... Q4Q2Q6 38722744
    853209 8ovj:B (2.4) BS04 rna ? GO:0003723 ... Q4Q2Q6 38722744
    853210 8ovj:C (2.4) BS01 rna ? GO:0003723 ... E9ADW5 38722744
    853211 8ovj:C (2.4) BS02 rna ? GO:0003723 ... E9ADW5 38722744
    853212 8ovj:C (2.4) BS03 rna ? GO:0003723 ... E9ADW5 38722744
    853213 8ovj:D (2.4) BS01 rna ? GO:0003723 ... P48157 38722744
    853214 8ovj:D (2.4) BS02 rna ? GO:0003723 ... P48157 38722744
    853215 8ovj:E (2.4) BS01 rna ? GO:0002181 ... Q4QC91 38722744
    853216 8ovj:E (2.4) BS02 rna ? GO:0002181 ... Q4QC91 38722744
    853217 8ovj:E (2.4) BS03 rna ? GO:0002181 ... Q4QC91 38722744
    853218 8ovj:F (2.4) BS01 rna ? GO:0002181 ... Q4Q4D3 38722744
    853219 8ovj:F (2.4) BS02 rna ? GO:0002181 ... Q4Q4D3 38722744
    853220 8ovj:G (2.4) BS01 rna ? GO:0000470 ... Q4QIP1 38722744
    853221 8ovj:G (2.4) BS02 rna ? GO:0000470 ... Q4QIP1 38722744
    853222 8ovj:G (2.4) BS03 rna ? GO:0000470 ... Q4QIP1 38722744
    853223 8ovj:H (2.4) BS01 rna ? GO:0003729 ... Q4QFG2 38722744
    853224 8ovj:H (2.4) BS02 rna ? GO:0003729 ... Q4QFG2 38722744
    853225 8ovj:H (2.4) BS03 rna ? GO:0003729 ... Q4QFG2 38722744
    853226 8ovj:H (2.4) BS04 rna ? GO:0003729 ... Q4QFG2 38722744
    853227 8ovj:I (2.4) BS01 rna ? GO:0003723 ... E9AEA8 38722744
    853228 8ovj:I (2.4) BS02 rna ? GO:0003723 ... E9AEA8 38722744
    853229 8ovj:J (2.4) BS01 rna ? GO:0003735 ... E9AFK3 38722744
    853230 8ovj:J (2.4) BS02 rna ? GO:0003735 ... E9AFK3 38722744
    853231 8ovj:K (2.4) BS01 rna ? GO:0003723 ... Q4QBJ1 38722744
    853232 8ovj:K (2.4) BS02 rna ? GO:0003723 ... Q4QBJ1 38722744
    853233 8ovj:K (2.4) BS03 rna ? GO:0003723 ... Q4QBJ1 38722744
    853234 8ovj:L (2.4) BS01 rna ? GO:0003735 ... E9AFK0 38722744
    853235 8ovj:L (2.4) BS02 rna ? GO:0003735 ... E9AFK0 38722744
    853236 8ovj:M (2.4) BS01 rna ? GO:0002181 ... Q4Q6S3 38722744
    853237 8ovj:M (2.4) BS02 rna ? GO:0002181 ... Q4Q6S3 38722744
    853238 8ovj:M (2.4) BS03 rna ? GO:0002181 ... Q4Q6S3 38722744
    853239 8ovj:M (2.4) BS04 MG ? GO:0002181 ... Q4Q6S3 38722744
    853240 8ovj:N (2.4) BS01 rna ? GO:0003735 ... O97213 38722744
    853241 8ovj:N (2.4) BS02 rna ? GO:0003735 ... O97213 38722744
    853242 8ovj:N (2.4) BS03 rna ? GO:0003735 ... O97213 38722744
    853243 8ovj:O (2.4) BS01 rna ? GO:0000027 ... E9AF09 38722744
    853244 8ovj:O (2.4) BS02 rna ? GO:0000027 ... E9AF09 38722744
    853245 8ovj:O (2.4) BS03 rna ? GO:0000027 ... E9AF09 38722744
    853246 8ovj:P (2.4) BS01 rna ? GO:0002181 ... Q4QG98 38722744
    853247 8ovj:P (2.4) BS02 rna ? GO:0002181 ... Q4QG98 38722744
    853248 8ovj:Q (2.4) BS01 rna ? GO:0003723 ... Q4QJ37 38722744
    853249 8ovj:Q (2.4) BS02 rna ? GO:0003723 ... Q4QJ37 38722744
    853250 8ovj:Q (2.4) BS03 rna ? GO:0003723 ... Q4QJ37 38722744
    853251 8ovj:Q (2.4) BS04 rna ? GO:0003723 ... Q4QJ37 38722744
    853252 8ovj:Q (2.4) BS05 rna ? GO:0003723 ... Q4QJ37 38722744
    853253 8ovj:R (2.4) BS01 rna ? GO:0002181 ... Q4Q5J4 38722744
    853254 8ovj:R (2.4) BS02 rna ? GO:0002181 ... Q4Q5J4 38722744
    853255 8ovj:R (2.4) BS03 rna ? GO:0002181 ... Q4Q5J4 38722744
    853256 8ovj:S (2.4) BS01 rna ? GO:0003735 ... Q4QEX4 38722744
    853257 8ovj:S (2.4) BS02 rna ? GO:0003735 ... Q4QEX4 38722744
    853258 8ovj:S (2.4) BS03 rna ? GO:0003735 ... Q4QEX4 38722744
    853259 8ovj:SA (2.4) BS01 rna ? GO:0003735 ... Q4FX73 38722744
    853260 8ovj:SB (2.4) BS01 rna ? GO:0000028 ... Q4Q0Q0 38722744
    853261 8ovj:SC (2.4) BS01 rna ? GO:0003723 ... Q4Q4A0 38722744
    853262 8ovj:SD (2.4) BS01 rna ? GO:0003723 ... Q4QIM3 38722744
    853263 8ovj:SE (2.4) BS01 rna ? GO:0003723 ... Q4QG31 38722744
    853264 8ovj:SF (2.4) BS01 rna ? GO:0003723 ... Q4QDL5 38722744
    853265 8ovj:SG (2.4) BS01 rna ? GO:0003735 ... Q9NE83 38722744
    853266 8ovj:SH (2.4) BS01 rna ? GO:0003729 ... Q868B1 38722744
    853267 8ovj:SH (2.4) BS02 MG ? GO:0003729 ... Q868B1 38722744
    853268 8ovj:SI (2.4) BS01 rna ? GO:0003735 ... E9AC32 38722744
    853269 8ovj:SJ (2.4) BS01 rna ? GO:0003735 ... Q4QGW3 38722744
    853270 8ovj:SK (2.4) BS01 rna ? GO:0002181 ... P25204 38722744
    853271 8ovj:SL (2.4) BS01 rna ? GO:0000462 ... Q4Q9A5 38722744
    853272 8ovj:SM (2.4) BS01 rna ? GO:0003735 ... Q4Q8G4 38722744
    853273 8ovj:SN (2.4) BS01 rna ? GO:0003723 ... Q4Q1X7 38722744
    853274 8ovj:SO (2.4) BS01 rna ? GO:0000028 ... Q4Q8H1 38722744
    853275 8ovj:SP (2.4) BS01 rna ? GO:0003735 ... Q4QC89 38722744
    853276 8ovj:SQ (2.4) BS01 rna ? GO:0003735 ... Q4QG97 38722744
    853277 8ovj:SR (2.4) BS01 rna ? GO:0003676 ... Q4Q1Y3 38722744
    853278 8ovj:SS (2.4) BS01 rna ? GO:0002181 ... Q4Q817 38722744
    853279 8ovj:SS (2.4) BS02 ZN ? GO:0002181 ... Q4Q817 38722744
    853280 8ovj:SS (2.4) BS03 MG ? GO:0002181 ... Q4Q817 38722744
    853281 8ovj:ST (2.4) BS01 rna ? GO:0000462 ... Q4Q3M1 38722744
    853282 8ovj:SU (2.4) BS01 rna N/A GO:0003735 ... N/A 38722744
    853283 8ovj:SV (2.4) BS01 rna ? GO:0003735 ... Q4Q806 38722744
    853284 8ovj:SW (2.4) BS01 rna ? GO:0003723 ... Q4QBV0 38722744
    853285 8ovj:SX (2.4) BS01 rna ? GO:0003735 ... E9AEE8 38722744
    853286 8ovj:SX (2.4) BS02 MG ? GO:0003735 ... E9AEE8 38722744
    853287 8ovj:SZ (2.4) BS01 rna ? GO:0002181 ... Q4Q1D2 38722744
    853288 8ovj:Sa (2.4) BS01 rna ? GO:0003735 ... Q4Q9X4 38722744
    853289 8ovj:Sb (2.4) BS01 rna ? GO:0003729 ... Q4Q8L6 38722744
    853290 8ovj:Sb (2.4) BS02 ZN ? GO:0003729 ... Q4Q8L6 38722744
    853291 8ovj:Sc (2.4) BS01 rna ? GO:0003735 ... Q4Q140 38722744
    853292 8ovj:Sd (2.4) BS01 rna ? GO:0000028 ... Q4Q931 38722744
    853293 8ovj:Se (2.4) BS01 rna ? GO:0003735 ... Q4Q7P0 38722744
    853294 8ovj:Sg (2.4) BS01 rna ? GO:0005080 ... Q4Q7Y7 38722744
    853295 8ovj:Sh (2.4) BS01 rna ? GO:0003676 ... Q4Q5K7 38722744
    853296 8ovj:T (2.4) BS01 rna ? GO:0002181 ... Q4QAX6 38722744
    853297 8ovj:T (2.4) BS02 rna ? GO:0002181 ... Q4QAX6 38722744
    853298 8ovj:T (2.4) BS03 rna ? GO:0002181 ... Q4QAX6 38722744
    853299 8ovj:T (2.4) BS04 rna ? GO:0002181 ... Q4QAX6 38722744
    853300 8ovj:U (2.4) BS01 rna ? GO:0002181 ... Q4Q0X2 38722744
    853301 8ovj:U (2.4) BS02 rna ? GO:0002181 ... Q4Q0X2 38722744
    853302 8ovj:U (2.4) BS03 rna ? GO:0002181 ... Q4Q0X2 38722744
    853303 8ovj:V (2.4) BS01 rna ? GO:0003735 ... Q4QJ20 38722744
    853304 8ovj:V (2.4) BS02 rna ? GO:0003735 ... Q4QJ20 38722744
    853305 8ovj:V (2.4) BS03 rna ? GO:0003735 ... Q4QJ20 38722744
    853306 8ovj:W (2.4) BS01 rna ? GO:0002181 ... Q4QAC5 38722744
    853307 8ovj:W (2.4) BS02 rna ? GO:0002181 ... Q4QAC5 38722744
    853308 8ovj:X (2.4) BS01 rna ? GO:0002181 ... Q4Q1W6 38722744
    853309 8ovj:X (2.4) BS02 rna ? GO:0002181 ... Q4Q1W6 38722744
    853310 8ovj:Y (2.4) BS01 rna ? GO:0003735 ... Q4Q504 38722744
    853311 8ovj:Y (2.4) BS02 rna ? GO:0003735 ... Q4Q504 38722744
    853312 8ovj:Z (2.4) BS01 rna ? GO:0003735 ... Q4QGW7 38722744
    853313 8ovj:a (2.4) BS01 rna ? GO:0000463 ... Q4Q8V7 38722744
    853314 8ovj:a (2.4) BS02 rna ? GO:0000463 ... Q4Q8V7 38722744
    853315 8ovj:b (2.4) BS01 rna ? GO:0002181 ... Q4Q178 38722744
    853316 8ovj:b (2.4) BS02 rna ? GO:0002181 ... Q4Q178 38722744
    853317 8ovj:c (2.4) BS01 rna ? GO:0000463 ... Q4Q9H4 38722744
    853318 8ovj:c (2.4) BS02 rna ? GO:0000463 ... Q4Q9H4 38722744
    853319 8ovj:d (2.4) BS01 rna ? GO:0003723 ... E9AEK1 38722744
    853320 8ovj:e (2.4) BS01 rna ? GO:0002181 ... E9AFF2 38722744
    853321 8ovj:e (2.4) BS02 rna ? GO:0002181 ... E9AFF2 38722744
    853322 8ovj:e (2.4) BS03 rna ? GO:0002181 ... E9AFF2 38722744
    853323 8ovj:e (2.4) BS04 rna ? GO:0002181 ... E9AFF2 38722744
    853324 8ovj:f (2.4) BS01 rna ? GO:0003735 ... Q4QC11 38722744
    853325 8ovj:g (2.4) BS01 rna ? GO:0002181 ... Q4QHL3 38722744
    853326 8ovj:g (2.4) BS02 rna ? GO:0002181 ... Q4QHL3 38722744
    853327 8ovj:g (2.4) BS03 rna ? GO:0002181 ... Q4QHL3 38722744
    853328 8ovj:h (2.4) BS01 rna ? GO:0003735 ... Q4QDP9 38722744
    853329 8ovj:h (2.4) BS02 rna ? GO:0003735 ... Q4QDP9 38722744
    853330 8ovj:h (2.4) BS03 rna ? GO:0003735 ... Q4QDP9 38722744
    853331 8ovj:i (2.4) BS01 rna ? GO:0002181 ... Q4QCE1 38722744
    853332 8ovj:i (2.4) BS02 rna ? GO:0002181 ... Q4QCE1 38722744
    853333 8ovj:j (2.4) BS01 rna ? GO:0000448 ... E9AEH2 38722744
    853334 8ovj:j (2.4) BS02 rna ? GO:0000448 ... E9AEH2 38722744
    853335 8ovj:j (2.4) BS03 rna ? GO:0000448 ... E9AEH2 38722744
    853336 8ovj:j (2.4) BS04 ZN ? GO:0000448 ... E9AEH2 38722744
    853337 8ovj:k (2.4) BS01 rna ? GO:0002181 ... Q4Q8X0 38722744
    853338 8ovj:k (2.4) BS02 rna ? GO:0002181 ... Q4Q8X0 38722744
    853339 8ovj:k (2.4) BS03 rna ? GO:0002181 ... Q4Q8X0 38722744
    853340 8ovj:l (2.4) BS01 rna ? GO:0002181 ... Q4QEQ0 38722744
    853341 8ovj:l (2.4) BS02 rna ? GO:0002181 ... Q4QEQ0 38722744
    853342 8ovj:l (2.4) BS03 rna ? GO:0002181 ... Q4QEQ0 38722744
    853343 8ovj:m (2.4) BS01 rna ? GO:0003729 ... P69201 38722744
    853344 8ovj:m (2.4) BS02 rna ? GO:0003729 ... P69201 38722744
    853345 8ovj:m (2.4) BS03 rna ? GO:0003729 ... P69201 38722744
    853346 8ovj:n (2.4) BS01 rna N/A GO:0003735 ... N/A 38722744
    853347 8ovj:o (2.4) BS01 rna ? GO:0003735 ... Q4QC01 38722744
    853348 8ovj:o (2.4) BS02 rna ? GO:0003735 ... Q4QC01 38722744
    853349 8ovj:o (2.4) BS03 rna ? GO:0003735 ... Q4QC01 38722744
    853350 8ovj:o (2.4) BS04 ZN ? GO:0003735 ... Q4QC01 38722744
    853351 8ovj:p (2.4) BS01 rna ? GO:0002181 ... Q4Q3L3 38722744
    853352 8ovj:p (2.4) BS02 rna ? GO:0002181 ... Q4Q3L3 38722744
    853353 8ovj:p (2.4) BS03 rna ? GO:0002181 ... Q4Q3L3 38722744
    853354 8ovj:p (2.4) BS04 ZN ? GO:0002181 ... Q4Q3L3 38722744
    853355 8ovo:A (1.7) BS01 ASP ? GO:0005576 ... P37902
    P42212
    N/A
    853356 8ovo:B (1.7) BS01 ASP ? GO:0005576 ... P37902
    P42212
    N/A
    853357 8ovp:A (1.7) BS01 ASP ? GO:0005576 ... P37902
    P42212
    N/A
    853358 8ovp:B (1.7) BS01 ASP ? GO:0005576 ... P37902
    P42212
    N/A
    853359 8ovr:A (1.6) BS01 PIN ? GO:0005975 ... F8UNI4 39283899
    853360 8ovs:AAA (1.123) BS01 UDP N/A N/A N/A 38703997
    853361 8ovs:AAA (1.123) BS02 MN N/A N/A N/A 38703997
    853362 8ovs:BBB (1.123) BS01 UDP N/A N/A N/A 38703997
    853363 8ovs:BBB (1.123) BS02 MN N/A N/A N/A 38703997
    853364 8ovv:A (2.26) BS01 B12 ? N/A Q3SFD8 N/A
    853365 8ovw:A (3.4) BS01 dna ? GO:0000122 ... P17106 37506202
    853366 8ovw:A (3.4) BS02 dna ? GO:0000122 ... P17106 37506202
    853367 8ovw:B (3.4) BS01 dna ? GO:0000122 ... P17106 37506202
    853368 8ovw:B (3.4) BS02 dna ? GO:0000122 ... P17106 37506202
    853369 8ovw:I (3.4) BS01 dna ? GO:0000776 ... Q12748 37506202
    853370 8ovw:L (3.4) BS01 dna ? GO:0000776 ... P38265 37506202
    853371 8ovw:N (3.4) BS01 dna ? GO:0000776 ... P38907 37506202
    853372 8ovw:N (3.4) BS02 dna ? GO:0000776 ... P38907 37506202
    853373 8ovz:A (2.206) BS01 W3N 2.7.10.1 GO:0004672 ... P08581 37343272
    853374 8ovz:B (2.206) BS01 W3N 2.7.10.1 GO:0004672 ... P08581 37343272
    853375 8ow0:A (3.4) BS01 dna ? GO:0000122 ... P17106 37506202
    853376 8ow0:A (3.4) BS02 dna ? GO:0000122 ... P17106 37506202
    853377 8ow0:B (3.4) BS01 dna ? GO:0000122 ... P17106 37506202
    853378 8ow0:B (3.4) BS02 dna ? GO:0000122 ... P17106 37506202
    853379 8ow0:a (3.4) BS01 dna ? GO:0000070 ... P36012 37506202
    853380 8ow0:a (3.4) BS02 dna ? GO:0000070 ... P36012 37506202
    853381 8ow0:b (3.4) BS01 dna ? GO:0000786 ... P02309 37506202
    853382 8ow0:b (3.4) BS02 dna ? GO:0000786 ... P02309 37506202
    853383 8ow0:c (3.4) BS01 dna ? GO:0000122 ... P04911 37506202
    853384 8ow0:c (3.4) BS02 dna ? GO:0000122 ... P04911 37506202
    853385 8ow0:d (3.4) BS01 dna ? GO:0000122 ... P02293 37506202
    853386 8ow0:e (3.4) BS01 dna ? GO:0000070 ... P36012 37506202
    853387 8ow0:e (3.4) BS02 dna ? GO:0000070 ... P36012 37506202
    853388 8ow0:f (3.4) BS01 dna ? GO:0000786 ... P02309 37506202
    853389 8ow0:f (3.4) BS02 dna ? GO:0000786 ... P02309 37506202
    853390 8ow0:g (3.4) BS01 dna ? GO:0000122 ... P04911 37506202
    853391 8ow0:g (3.4) BS02 dna ? GO:0000122 ... P04911 37506202
    853392 8ow0:h (3.4) BS01 dna ? GO:0000122 ... P02293 37506202
    853393 8ow1:A (3.7) BS01 dna ? GO:0000122 ... P17106 37506202
    853394 8ow1:A (3.7) BS02 dna ? GO:0000122 ... P17106 37506202
    853395 8ow1:B (3.7) BS01 dna ? GO:0000122 ... P17106 37506202
    853396 8ow1:B (3.7) BS02 dna ? GO:0000122 ... P17106 37506202
    853397 8ow1:CE (3.7) BS01 dna ? GO:0000775 ... P40969 37506202
    853398 8ow1:II (3.7) BS01 dna ? GO:0000776 ... Q12748 37506202
    853399 8ow1:N (3.7) BS01 dna ? GO:0000776 ... P38907 37506202
    853400 8ow1:N (3.7) BS02 dna ? GO:0000776 ... P38907 37506202

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).