SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    853401 8ow1:QQ (3.7) BS01 dna ? GO:0000776 ... P53298 37506202
    853402 8ow1:a (3.7) BS01 dna ? GO:0000070 ... P36012 37506202
    853403 8ow1:a (3.7) BS02 dna ? GO:0000070 ... P36012 37506202
    853404 8ow1:b (3.7) BS01 dna ? GO:0000786 ... P02309 37506202
    853405 8ow1:c (3.7) BS01 dna ? GO:0000122 ... P04911 37506202
    853406 8ow1:c (3.7) BS02 dna ? GO:0000122 ... P04911 37506202
    853407 8ow1:e (3.7) BS01 dna ? GO:0000070 ... P36012 37506202
    853408 8ow1:e (3.7) BS02 dna ? GO:0000070 ... P36012 37506202
    853409 8ow1:f (3.7) BS01 dna ? GO:0000786 ... P02309 37506202
    853410 8ow1:f (3.7) BS02 dna ? GO:0000786 ... P02309 37506202
    853411 8ow1:g (3.7) BS01 dna ? GO:0000122 ... P04911 37506202
    853412 8ow1:g (3.7) BS02 dna ? GO:0000122 ... P04911 37506202
    853413 8ow1:h (3.7) BS01 dna ? GO:0000122 ... P02293 37506202
    853414 8ow2:A (2.57) BS01 QIH 2.7.11.1
    2.7.1.137
    2.7.1.153    		 GO:0016301 ... P42336 37225977
    853415 8ow3:A (2.27) BS01 W40 2.7.10.1 GO:0004672 ... P08581 37343272
    853416 8ow4:A (2.75) BS01 dna ? GO:0003677 ... Q13469 N/A
    853417 8ow4:A (2.75) BS02 dna ? GO:0003677 ... Q13469 N/A
    853418 8ow4:B (2.75) BS01 dna ? GO:0003677 ... Q13469 N/A
    853419 8ow4:B (2.75) BS02 dna ? GO:0003677 ... Q13469 N/A
    853420 8ow4:B (2.75) BS03 dna ? GO:0003677 ... Q13469 N/A
    853421 8ow5:A (2.84) BS01 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853422 8ow5:A (2.84) BS02 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853423 8ow5:B (2.84) BS01 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853424 8ow5:B (2.84) BS02 VEO 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853425 8ow5:B (2.84) BS03 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853426 8ow5:C (2.84) BS01 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853427 8ow5:D (2.84) BS01 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853428 8ow5:D (2.84) BS02 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853429 8ow6:A (1.2) BS01 CLA ? GO:0016168 ... Q9FEY4 39321862
    853430 8ow6:A (1.2) BS02 PID ? GO:0016168 ... Q9FEY4 39321862
    853431 8ow6:A (1.2) BS03 PID ? GO:0016168 ... Q9FEY4 39321862
    853432 8ow6:A (1.2) BS04 PID ? GO:0016168 ... Q9FEY4 39321862
    853433 8ow6:A (1.2) BS05 PID ? GO:0016168 ... Q9FEY4 39321862
    853434 8ow6:A (1.2) BS06 W4O ? GO:0016168 ... Q9FEY4 39321862
    853435 8ow6:A (1.2) BS07 PID ? GO:0016168 ... Q9FEY4 39321862
    853436 8ow6:A (1.2) BS08 PID ? GO:0016168 ... Q9FEY4 39321862
    853437 8ow6:B (1.2) BS01 PID N/A GO:0016168 ... Q9FEY4 39321862
    853438 8ow6:B (1.2) BS02 PID N/A GO:0016168 ... Q9FEY4 39321862
    853439 8ow6:B (1.2) BS03 PID N/A GO:0016168 ... Q9FEY4 39321862
    853440 8ow6:B (1.2) BS04 CLA N/A GO:0016168 ... Q9FEY4 39321862
    853441 8ow6:B (1.2) BS05 PID N/A GO:0016168 ... Q9FEY4 39321862
    853442 8ow6:B (1.2) BS06 PID N/A GO:0016168 ... Q9FEY4 39321862
    853443 8ow6:B (1.2) BS07 PID N/A GO:0016168 ... Q9FEY4 39321862
    853444 8ow6:B (1.2) BS08 PID N/A GO:0016168 ... Q9FEY4 39321862
    853445 8ow6:B (1.2) BS09 W4O N/A GO:0016168 ... Q9FEY4 39321862
    853446 8ow6:C (1.2) BS01 CLA ? GO:0016168 ... Q9FEY4 39321862
    853447 8ow6:C (1.2) BS02 PID ? GO:0016168 ... Q9FEY4 39321862
    853448 8ow6:C (1.2) BS03 PID ? GO:0016168 ... Q9FEY4 39321862
    853449 8ow6:C (1.2) BS04 PID ? GO:0016168 ... Q9FEY4 39321862
    853450 8ow6:C (1.2) BS05 PID ? GO:0016168 ... Q9FEY4 39321862
    853451 8ow6:C (1.2) BS06 W4O ? GO:0016168 ... Q9FEY4 39321862
    853452 8ow6:C (1.2) BS07 PID ? GO:0016168 ... Q9FEY4 39321862
    853453 8ow6:C (1.2) BS08 PID ? GO:0016168 ... Q9FEY4 39321862
    853454 8ow6:D (1.2) BS01 PID N/A GO:0016168 ... Q9FEY4 39321862
    853455 8ow6:D (1.2) BS02 PID N/A GO:0016168 ... Q9FEY4 39321862
    853456 8ow6:D (1.2) BS03 PID N/A GO:0016168 ... Q9FEY4 39321862
    853457 8ow6:D (1.2) BS04 PID N/A GO:0016168 ... Q9FEY4 39321862
    853458 8ow6:D (1.2) BS05 CLA N/A GO:0016168 ... Q9FEY4 39321862
    853459 8ow6:D (1.2) BS06 PID N/A GO:0016168 ... Q9FEY4 39321862
    853460 8ow6:D (1.2) BS07 PID N/A GO:0016168 ... Q9FEY4 39321862
    853461 8ow6:D (1.2) BS08 PID N/A GO:0016168 ... Q9FEY4 39321862
    853462 8ow6:D (1.2) BS09 PID N/A GO:0016168 ... Q9FEY4 39321862
    853463 8ow6:D (1.2) BS10 W4O N/A GO:0016168 ... Q9FEY4 39321862
    853464 8ow7:A (3.06) BS01 AMU ? N/A G8UQH1 37481208
    853465 8ow7:B (3.06) BS01 AMU ? N/A G8UQH1 37481208
    853466 8ow7:C (3.06) BS01 AMU ? N/A G8UQH1 37481208
    853467 8ow7:D (3.06) BS01 AMU ? N/A G8UQH1 37481208
    853468 8ow7:E (3.06) BS01 AMU ? N/A G8UQH1 37481208
    853469 8ow7:F (3.06) BS01 AMU ? N/A G8UQH1 37481208
    853470 8ow8:A (2.0) BS01 ZN 3.4.24.69 GO:0004222 ... A0A242DI27 37628902
    853471 8ow9:A (2.7) BS01 AMU ? N/A G8UQH9 37481208
    853472 8ow9:B (2.7) BS01 AMU ? N/A G8UQH9 37481208
    853473 8ow9:D (2.7) BS01 AMU ? N/A G8UQH9 37481208
    853474 8ow9:E (2.7) BS01 AMU ? N/A G8UQH9 37481208
    853475 8owa:A (2.85) BS01 VUK 7.2.2.10 GO:0000166 ... P04191 N/A
    853476 8owb:A (2.25) BS01 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853477 8owb:A (2.25) BS02 VE6 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853478 8owb:B (2.25) BS01 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853479 8owb:B (2.25) BS02 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853480 8owb:C (2.25) BS01 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853481 8owb:C (2.25) BS02 VE6 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853482 8owb:D (2.25) BS01 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853483 8owc:A (1.7) BS01 7MT N/A GO:0003796 ... P00698 38738452
    853484 8owf:A (1.3) BS01 GCS ? GO:0004553 ... F8UNI5 39283899
    853485 8owf:A (1.3) BS02 GCS ? GO:0004553 ... F8UNI5 39283899
    853486 8owf:A (1.3) BS03 GCS ? GO:0004553 ... F8UNI5 39283899
    853487 8owf:A (1.3) BS04 GCS ? GO:0004553 ... F8UNI5 39283899
    853488 8owg:A (2.631) BS01 W40 2.7.10.1 GO:0004672 ... P08581 37343272
    853489 8owg:B (2.631) BS01 W40 2.7.10.1 GO:0004672 ... P08581 37343272
    853490 8owg:C (2.631) BS01 W40 2.7.10.1 GO:0004672 ... P08581 37343272
    853491 8owl:A (3.02) BS01 VSR 7.2.2.10 GO:0000166 ... P04191 N/A
    853492 8owm:A (1.7) BS01 NAD 1.4.1.3 GO:0000325 ... Q38946 37478728
    853493 8owm:A (1.7) BS02 U5C 1.4.1.3 GO:0000325 ... Q38946 37478728
    853494 8owm:A (1.7) BS03 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    853495 8owm:B (1.7) BS01 NAD 1.4.1.3 GO:0000325 ... Q38946 37478728
    853496 8owm:B (1.7) BS02 U5C 1.4.1.3 GO:0000325 ... Q38946 37478728
    853497 8owm:B (1.7) BS03 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    853498 8owm:C (1.7) BS01 NAD 1.4.1.3 GO:0000325 ... Q38946 37478728
    853499 8owm:C (1.7) BS02 U5C 1.4.1.3 GO:0000325 ... Q38946 37478728
    853500 8owm:C (1.7) BS03 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    853501 8owm:D (1.7) BS01 NAD 1.4.1.3 GO:0000325 ... Q38946 37478728
    853502 8owm:D (1.7) BS02 U5C 1.4.1.3 GO:0000325 ... Q38946 37478728
    853503 8owm:D (1.7) BS03 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    853504 8owm:E (1.7) BS01 NAD 1.4.1.3 GO:0000325 ... Q38946 37478728
    853505 8owm:E (1.7) BS02 U5C 1.4.1.3 GO:0000325 ... Q38946 37478728
    853506 8owm:E (1.7) BS03 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    853507 8owm:F (1.7) BS01 NAD 1.4.1.3 GO:0000325 ... Q38946 37478728
    853508 8owm:F (1.7) BS02 U5C 1.4.1.3 GO:0000325 ... Q38946 37478728
    853509 8owm:F (1.7) BS03 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    853510 8own:A (3.26) BS01 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    853511 8own:B (3.26) BS01 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    853512 8own:C (3.26) BS01 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    853513 8own:D (3.26) BS01 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    853514 8own:E (3.26) BS01 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    853515 8own:F (3.26) BS01 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    853516 8owo:A (1.8) BS01 SAM 2.1.1.354 GO:0000978 ... Q9H7B4 38911161
    853517 8owo:A (1.8) BS02 ZN 2.1.1.354 GO:0000978 ... Q9H7B4 38911161
    853518 8owo:A (1.8) BS03 ZN 2.1.1.354 GO:0000978 ... Q9H7B4 38911161
    853519 8owo:A (1.8) BS04 ZN 2.1.1.354 GO:0000978 ... Q9H7B4 38911161
    853520 8owp:A (1.993) BS01 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853521 8owp:A (1.993) BS02 W52 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853522 8owp:A (1.993) BS03 W52 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853523 8owp:B (1.993) BS01 W52 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853524 8owp:B (1.993) BS02 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853525 8owp:C (1.993) BS01 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853526 8owp:C (1.993) BS02 W52 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853527 8owp:D (1.993) BS01 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853528 8owq:A (2.106) BS01 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853529 8owq:A (2.106) BS02 W4X 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853530 8owq:A (2.106) BS03 W4X 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853531 8owq:A (2.106) BS04 W4X 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853532 8owq:B (2.106) BS01 W4X 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853533 8owq:B (2.106) BS02 W4X 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853534 8owq:B (2.106) BS03 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853535 8owq:B (2.106) BS04 W4X 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853536 8owq:C (2.106) BS01 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853537 8owq:C (2.106) BS02 W4X 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853538 8owq:C (2.106) BS03 W4X 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853539 8owq:D (2.106) BS01 W4X 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853540 8owq:D (2.106) BS02 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853541 8owr:A (2.439) BS01 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853542 8owr:A (2.439) BS02 W5E 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853543 8owr:B (2.439) BS01 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853544 8owr:B (2.439) BS02 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853545 8owr:C (2.439) BS01 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853546 8owr:C (2.439) BS02 W5E 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853547 8owr:D (2.439) BS01 CTP 4.1.1.36
    6.3.2.5    		 N/A A0QWT2 N/A
    853548 8owu:B (2.54) BS01 MG N/A N/A A0AAT8XUD1 39438720
    853549 8owx:A (2.601) BS01 SAH 2.1.1.- GO:0005515 ... Q8TCB7 38918637
    853550 8owx:B (2.601) BS01 SAH 2.1.1.- GO:0005515 ... Q8TCB7 38918637
    853551 8owy:A (3.2) BS01 SAH 2.1.1.- N/A Q8TCB7 38918637
    853552 8owy:B (3.2) BS01 SAH 2.1.1.- N/A Q8TCB7 38918637
    853553 8owz:A (1.65) BS01 KZU 2.3.1.-
    2.3.1.286    		 GO:0017136 ... Q8IXJ6 37902787
    853554 8owz:A (1.65) BS02 BU3 2.3.1.-
    2.3.1.286    		 GO:0017136 ... Q8IXJ6 37902787
    853555 8owz:A (1.65) BS03 ZN 2.3.1.-
    2.3.1.286    		 GO:0017136 ... Q8IXJ6 37902787
    853556 8ox0:A (2.52) BS01 dna ? GO:0000786 ... P68431 37624885
    853557 8ox0:A (2.52) BS02 dna ? GO:0000786 ... P68431 37624885
    853558 8ox0:B (2.52) BS01 dna ? GO:0000781 ... P62805 37624885
    853559 8ox0:B (2.52) BS02 dna ? GO:0000781 ... P62805 37624885
    853560 8ox0:C (2.52) BS01 dna ? GO:0000786 ... Q93077 37624885
    853561 8ox0:C (2.52) BS02 dna ? GO:0000786 ... Q93077 37624885
    853562 8ox0:D (2.52) BS01 dna ? GO:0000786 ... P62807 37624885
    853563 8ox0:D (2.52) BS02 dna ? GO:0000786 ... P62807 37624885
    853564 8ox0:E (2.52) BS01 dna ? GO:0000786 ... P68431 37624885
    853565 8ox0:E (2.52) BS02 dna ? GO:0000786 ... P68431 37624885
    853566 8ox0:F (2.52) BS01 dna ? GO:0000781 ... P62805 37624885
    853567 8ox0:F (2.52) BS02 dna ? GO:0000781 ... P62805 37624885
    853568 8ox0:G (2.52) BS01 dna ? GO:0000786 ... Q93077 37624885
    853569 8ox0:G (2.52) BS02 dna ? GO:0000786 ... Q93077 37624885
    853570 8ox0:H (2.52) BS01 dna ? GO:0000786 ... P62807 37624885
    853571 8ox0:H (2.52) BS02 dna ? GO:0000786 ... P62807 37624885
    853572 8ox1:A (2.7) BS01 dna ? GO:0000786 ... P68431 37624885
    853573 8ox1:A (2.7) BS02 dna ? GO:0000786 ... P68431 37624885
    853574 8ox1:B (2.7) BS01 dna ? GO:0000781 ... P62805 37624885
    853575 8ox1:B (2.7) BS02 dna ? GO:0000781 ... P62805 37624885
    853576 8ox1:C (2.7) BS01 dna ? GO:0000786 ... Q93077 37624885
    853577 8ox1:C (2.7) BS02 dna ? GO:0000786 ... Q93077 37624885
    853578 8ox1:D (2.7) BS01 dna ? GO:0000786 ... P62807 37624885
    853579 8ox1:D (2.7) BS02 dna ? GO:0000786 ... P62807 37624885
    853580 8ox1:E (2.7) BS01 dna ? GO:0000786 ... P68431 37624885
    853581 8ox1:E (2.7) BS02 dna ? GO:0000786 ... P68431 37624885
    853582 8ox1:F (2.7) BS01 dna ? GO:0000781 ... P62805 37624885
    853583 8ox1:F (2.7) BS02 dna ? GO:0000781 ... P62805 37624885
    853584 8ox1:G (2.7) BS01 dna ? GO:0000786 ... Q93077 37624885
    853585 8ox1:G (2.7) BS02 dna ? GO:0000786 ... Q93077 37624885
    853586 8ox1:H (2.7) BS01 dna ? GO:0000786 ... P62807 37624885
    853587 8ox1:H (2.7) BS02 dna ? GO:0000786 ... P62807 37624885
    853588 8ox1:L (2.7) BS01 dna ? GO:0000723 ... P54274 37624885
    853589 8ox1:L (2.7) BS02 dna ? GO:0000723 ... P54274 37624885
    853590 8ox1:M (2.7) BS01 dna ? GO:0000723 ... P54274 37624885
    853591 8ox1:M (2.7) BS02 dna ? GO:0000723 ... P54274 37624885
    853592 8ox3:A (1.05) BS01 BDP N/A GO:0005540 ... Q8BHC0 N/A
    853593 8ox3:A (1.05) BS02 BDP N/A GO:0005540 ... Q8BHC0 N/A
    853594 8ox3:A (1.05) BS03 BDP N/A GO:0005540 ... Q8BHC0 N/A
    853595 8ox4:A (3.4) BS01 ACP 7.6.2.1 GO:0000166 ... O43520 37980352
    853596 8ox4:A (3.4) BS02 MG 7.6.2.1 GO:0000166 ... O43520 37980352
    853597 8ox5:A (2.9) BS01 ADP 7.6.2.1 GO:0000166 ... O43520 37980352
    853598 8ox5:A (2.9) BS02 ALF 7.6.2.1 GO:0000166 ... O43520 37980352
    853599 8ox5:A (2.9) BS03 MG 7.6.2.1 GO:0000166 ... O43520 37980352
    853600 8ox6:A (2.39) BS01 MG 7.6.2.1 GO:0000166 ... O43520 37980352
    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).