SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    853601 8ox6:A (2.39) BS02 ALF 7.6.2.1 GO:0000166 ... O43520 37980352
    853602 8ox7:A (2.56) BS01 MG 7.6.2.1 GO:0000166 ... O43520 37980352
    853603 8ox7:A (2.56) BS02 IP9 7.6.2.1 GO:0000166 ... O43520 37980352
    853604 8ox8:A (2.98) BS01 MG 7.6.2.1 GO:0000166 ... O43520 37980352
    853605 8ox8:A (2.98) BS02 IP9 7.6.2.1 GO:0000166 ... O43520 37980352
    853606 8ox9:A (2.72) BS01 BEF 7.6.2.1 GO:0000166 ... O43520 37980352
    853607 8ox9:A (2.72) BS02 MG 7.6.2.1 GO:0000166 ... O43520 37980352
    853608 8ox9:A (2.72) BS03 IP9 7.6.2.1 GO:0000166 ... O43520 37980352
    853609 8oxa:A (2.76) BS01 VN4 7.6.2.1 GO:0000166 ... O43520 37980352
    853610 8oxa:A (2.76) BS02 MG 7.6.2.1 GO:0000166 ... O43520 37980352
    853611 8oxa:A (2.76) BS03 D39 7.6.2.1 GO:0000166 ... O43520 37980352
    853612 8oxb:A (2.99) BS01 VN4 7.6.2.1 GO:0000166 ... O43520 37980352
    853613 8oxb:A (2.99) BS02 MG 7.6.2.1 GO:0000166 ... O43520 37980352
    853614 8oxc:A (2.58) BS01 VN4 7.6.2.1 GO:0000166 ... O43520 37980352
    853615 8oxc:A (2.58) BS02 MG 7.6.2.1 GO:0000166 ... O43520 37980352
    853616 8oxc:A (2.58) BS03 PIE 7.6.2.1 GO:0000166 ... O43520 37980352
    853617 8oxd:A (1.32) BS01 BDP N/A GO:0005540 ... Q9Y5Y7 N/A
    853618 8oxd:A (1.32) BS02 BDP N/A GO:0005540 ... Q9Y5Y7 N/A
    853619 8oxe:A (2.26) BS01 ADP 2.7.1.134 GO:0000287 ... A4H2J0 38146842
    853620 8oxe:A (2.26) BS02 MG 2.7.1.134 GO:0000287 ... A4H2J0 38146842
    853621 8oxe:A (2.26) BS03 MG 2.7.1.134 GO:0000287 ... A4H2J0 38146842
    853622 8oxe:A (2.26) BS04 MG 2.7.1.134 GO:0000287 ... A4H2J0 38146842
    853623 8oxg:A (1.731) BS01 W5N 3.4.11.18 GO:0006508 ... P50579 38530115
    853624 8oxg:A (1.731) BS02 MN 3.4.11.18 GO:0006508 ... P50579 38530115
    853625 8oxg:A (1.731) BS03 MN 3.4.11.18 GO:0006508 ... P50579 38530115
    853626 8oxg:B (1.731) BS01 W5N 3.4.11.18 GO:0006508 ... P50579 38530115
    853627 8oxg:B (1.731) BS02 MN 3.4.11.18 GO:0006508 ... P50579 38530115
    853628 8oxg:B (1.731) BS03 MN 3.4.11.18 GO:0006508 ... P50579 38530115
    853629 8oxm:A (3.3) BS01 peptide 2.7.11.1 GO:0000077 ... Q13315 37756394
    853630 8oxm:A (3.3) BS02 ANP 2.7.11.1 GO:0000077 ... Q13315 37756394
    853631 8oxm:A (3.3) BS03 ZN 2.7.11.1 GO:0000077 ... Q13315 37756394
    853632 8oxm:B (3.3) BS01 peptide 2.7.11.1 GO:0000077 ... Q13315 37756394
    853633 8oxm:B (3.3) BS02 ANP 2.7.11.1 GO:0000077 ... Q13315 37756394
    853634 8oxm:B (3.3) BS03 ZN 2.7.11.1 GO:0000077 ... Q13315 37756394
    853635 8oxn:AAA (2.0) BS01 VFH 1.13.11.48 GO:0003824 ... O31266 37799987
    853636 8oxn:BBB (2.0) BS01 VFH 1.13.11.48 GO:0003824 ... O31266 37799987
    853637 8oxn:CCC (2.0) BS01 VFH 1.13.11.48 GO:0003824 ... O31266 37799987
    853638 8oxn:DDD (2.0) BS01 VFH 1.13.11.48 GO:0003824 ... O31266 37799987
    853639 8oxo:A (3.0) BS01 peptide 2.7.11.1 GO:0000077 ... Q13315 37756394
    853640 8oxo:A (3.0) BS02 ANP 2.7.11.1 GO:0000077 ... Q13315 37756394
    853641 8oxo:A (3.0) BS03 MG 2.7.11.1 GO:0000077 ... Q13315 37756394
    853642 8oxo:A (3.0) BS04 ZN 2.7.11.1 GO:0000077 ... Q13315 37756394
    853643 8oxo:B (3.0) BS01 peptide 2.7.11.1 GO:0000077 ... Q13315 37756394
    853644 8oxo:B (3.0) BS02 ANP 2.7.11.1 GO:0000077 ... Q13315 37756394
    853645 8oxo:B (3.0) BS03 MG 2.7.11.1 GO:0000077 ... Q13315 37756394
    853646 8oxo:B (3.0) BS04 ZN 2.7.11.1 GO:0000077 ... Q13315 37756394
    853647 8oxp:A (2.6) BS01 ANP 2.7.11.1 GO:0000077 ... Q13315 37756394
    853648 8oxp:A (2.6) BS02 MG 2.7.11.1 GO:0000077 ... Q13315 37756394
    853649 8oxp:A (2.6) BS03 ZN 2.7.11.1 GO:0000077 ... Q13315 37756394
    853650 8oxp:B (2.6) BS01 ANP 2.7.11.1 GO:0000077 ... Q13315 37756394
    853651 8oxp:B (2.6) BS02 MG 2.7.11.1 GO:0000077 ... Q13315 37756394
    853652 8oxp:B (2.6) BS03 ZN 2.7.11.1 GO:0000077 ... Q13315 37756394
    853653 8oxq:A (2.5) BS01 ANP 2.7.11.1 GO:0000077 ... Q13315 37756394
    853654 8oxq:A (2.5) BS02 MG 2.7.11.1 GO:0000077 ... Q13315 37756394
    853655 8oxq:A (2.5) BS03 ZN 2.7.11.1 GO:0000077 ... Q13315 37756394
    853656 8oxq:B (2.5) BS01 ANP 2.7.11.1 GO:0000077 ... Q13315 37756394
    853657 8oxq:B (2.5) BS02 MG 2.7.11.1 GO:0000077 ... Q13315 37756394
    853658 8oxq:B (2.5) BS03 ZN 2.7.11.1 GO:0000077 ... Q13315 37756394
    853659 8oxs:C (1.6) BS01 GLA N/A GO:0005515 ... P01556 N/A
    853660 8oxs:C (1.6) BS02 GAL N/A GO:0005515 ... P01556 N/A
    853661 8oxs:D (1.6) BS01 GLA N/A GO:0005515 ... P01556 N/A
    853662 8oxs:D (1.6) BS02 GAL N/A GO:0005515 ... P01556 N/A
    853663 8oxs:E (1.6) BS01 GLA N/A GO:0005515 ... P01556 N/A
    853664 8oxs:E (1.6) BS02 GAL N/A GO:0005515 ... P01556 N/A
    853665 8oxs:F (1.6) BS01 GAL N/A GO:0005515 ... P01556 N/A
    853666 8oxs:G (1.6) BS01 GAL N/A GO:0005515 ... P01556 N/A
    853667 8oxs:G (1.6) BS02 GLA N/A GO:0005515 ... P01556 N/A
    853668 8oxs:H (1.6) BS01 GAL N/A GO:0005515 ... P01556 N/A
    853669 8oxs:H (1.6) BS02 GLA N/A GO:0005515 ... P01556 N/A
    853670 8oxs:I (1.6) BS01 GAL N/A GO:0005515 ... P01556 N/A
    853671 8oxs:K (1.6) BS01 GLA N/A GO:0005515 ... P01556 N/A
    853672 8oxs:K (1.6) BS02 GAL N/A GO:0005515 ... P01556 N/A
    853673 8oxs:L (1.6) BS01 GLA N/A GO:0005515 ... P01556 N/A
    853674 8oxs:L (1.6) BS02 GAL N/A GO:0005515 ... P01556 N/A
    853675 8oxt:AAA (2.003) BS01 ZZ8 1.13.11.48 GO:0003824 ... O31266 37799987
    853676 8oxt:BBB (2.003) BS01 ZZ8 1.13.11.48 GO:0003824 ... O31266 37799987
    853677 8oxu:B (2.94) BS01 W5R ? GO:0005524 ... P02829 37509087
    853678 8oxu:C (2.94) BS01 W5R ? GO:0005524 ... P02829 37509087
    853679 8oxv:A (1.8) BS01 CA 2.3.2.13 GO:0003810 ... Q08188 37798283
    853680 8oxv:A (1.8) BS02 CA 2.3.2.13 GO:0003810 ... Q08188 37798283
    853681 8oxv:A (1.8) BS03 CA 2.3.2.13 GO:0003810 ... Q08188 37798283
    853682 8oxw:A (1.7) BS01 CA 2.3.2.13 GO:0003810 ... Q08188 37798283
    853683 8oxw:A (1.7) BS02 CA 2.3.2.13 GO:0003810 ... Q08188 37798283
    853684 8oxw:A (1.7) BS03 CA 2.3.2.13 GO:0003810 ... Q08188 37798283
    853685 8oxx:A (2.5) BS01 CA 2.3.2.13 GO:0018149 ... Q08188 37798283
    853686 8oxx:A (2.5) BS02 CA 2.3.2.13 GO:0018149 ... Q08188 37798283
    853687 8oxx:A (2.5) BS03 CA 2.3.2.13 GO:0018149 ... Q08188 37798283
    853688 8oxx:A (2.5) BS04 P6S 2.3.2.13 GO:0018149 ... Q08188 37798283
    853689 8oxx:A (2.5) BS05 ONL 2.3.2.13 GO:0018149 ... Q08188 37798283
    853690 8oxx:A (2.5) BS06 DVA 2.3.2.13 GO:0018149 ... Q08188 37798283
    853691 8oy1:A (3.34) BS01 GDP ? GO:0000139 ... P08754 39706421
    853692 8oy2:A (2.618) BS01 W5W 2.7.11.22 GO:0000082 ... P24941 37983497
    853693 8oy3:A (2.16) BS01 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853694 8oy3:A (2.16) BS02 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853695 8oy3:A (2.16) BS03 FDA 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853696 8oy3:B (2.16) BS01 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853697 8oy3:B (2.16) BS02 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853698 8oy3:B (2.16) BS03 FDA 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853699 8oy4:A (2.35) BS01 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853700 8oy4:A (2.35) BS02 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853701 8oy4:A (2.35) BS03 FDA 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853702 8oy4:B (2.35) BS01 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853703 8oy4:B (2.35) BS02 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853704 8oy4:B (2.35) BS03 FDA 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853705 8oy5:A (2.27) BS01 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853706 8oy5:A (2.27) BS02 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853707 8oy5:A (2.27) BS03 FDA 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853708 8oy5:B (2.27) BS01 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853709 8oy5:B (2.27) BS02 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853710 8oy5:B (2.27) BS03 FDA 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853711 8oy6:A (2.35) BS01 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853712 8oy6:A (2.35) BS02 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853713 8oy6:A (2.35) BS03 FDA 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853714 8oy6:B (2.35) BS01 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853715 8oy6:B (2.35) BS02 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853716 8oy6:B (2.35) BS03 FDA 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853717 8oy7:A (2.36) BS01 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853718 8oy7:A (2.36) BS02 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853719 8oy7:A (2.36) BS03 FDA 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853720 8oy7:B (2.36) BS01 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853721 8oy7:B (2.36) BS02 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853722 8oy7:B (2.36) BS03 FDA 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853723 8oy8:A (2.39) BS01 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853724 8oy8:A (2.39) BS02 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853725 8oy8:A (2.39) BS03 FDA 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853726 8oy8:B (2.39) BS01 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853727 8oy8:B (2.39) BS02 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853728 8oy8:B (2.39) BS03 FDA 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853729 8oy9:A (2.24) BS01 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853730 8oy9:A (2.24) BS02 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853731 8oy9:A (2.24) BS03 FDA 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853732 8oy9:B (2.24) BS01 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853733 8oy9:B (2.24) BS02 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853734 8oy9:B (2.24) BS03 FDA 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853735 8oya:A (2.18) BS01 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853736 8oya:A (2.18) BS02 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853737 8oya:A (2.18) BS03 FDA 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853738 8oya:B (2.18) BS01 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853739 8oya:B (2.18) BS02 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853740 8oya:B (2.18) BS03 FDA 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853741 8oyb:A (2.25) BS01 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853742 8oyb:A (2.25) BS02 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853743 8oyb:A (2.25) BS03 FDA 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853744 8oyb:B (2.25) BS01 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853745 8oyb:B (2.25) BS02 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853746 8oyb:B (2.25) BS03 FDA 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853747 8oyc:A (2.5) BS01 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853748 8oyc:A (2.5) BS02 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853749 8oyc:A (2.5) BS03 FDA 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853750 8oyc:B (2.5) BS01 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853751 8oyc:B (2.5) BS02 dna 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853752 8oyc:B (2.5) BS03 FDA 4.1.99.3 GO:0000719 ... Q8PYK9 38033070
    853753 8oyf:A (2.1) BS01 NA ? GO:0016020 ... Q9K0A9 37645971
    853754 8oyf:A (2.1) BS02 NA ? GO:0016020 ... Q9K0A9 37645971
    853755 8oyg:A (2.3) BS01 NA ? GO:0016020 ... Q9K0A9 37645971
    853756 8oyg:A (2.3) BS02 NA ? GO:0016020 ... Q9K0A9 37645971
    853757 8oyg:A (2.3) BS03 PAF ? GO:0016020 ... Q9K0A9 37645971
    853758 8oyh:A (1.8) BS01 peptide 3.4.21.75 GO:0004252 ... P09958 38385828
    853759 8oyh:A (1.8) BS02 CA 3.4.21.75 GO:0004252 ... P09958 38385828
    853760 8oyh:A (1.8) BS03 CA 3.4.21.75 GO:0004252 ... P09958 38385828
    853761 8oyh:A (1.8) BS04 CA 3.4.21.75 GO:0004252 ... P09958 38385828
    853762 8oyi:A (2.19) BS01 CU 1.14.18.3 N/A G1UBD1 38187819
    853763 8oyi:A (2.19) BS02 CU 1.14.18.3 N/A G1UBD1 38187819
    853764 8oyi:C (2.19) BS01 CU 1.14.13.25 GO:0015049 ... Q603F1 38187819
    853765 8oyi:C (2.19) BS02 HXG 1.14.13.25 GO:0015049 ... Q603F1 38187819
    853766 8oyi:C (2.19) BS03 HXG 1.14.13.25 GO:0015049 ... Q603F1 38187819
    853767 8oyi:C (2.19) BS04 ETF 1.14.13.25 GO:0015049 ... Q603F1 38187819
    853768 8oyi:E (2.19) BS01 CU 1.14.18.3 N/A G1UBD1 38187819
    853769 8oyi:E (2.19) BS02 CU 1.14.18.3 N/A G1UBD1 38187819
    853770 8oyi:G (2.19) BS01 CU 1.14.13.25 GO:0015049 ... Q603F1 38187819
    853771 8oyi:G (2.19) BS02 HXG 1.14.13.25 GO:0015049 ... Q603F1 38187819
    853772 8oyi:G (2.19) BS03 HXG 1.14.13.25 GO:0015049 ... Q603F1 38187819
    853773 8oyi:G (2.19) BS04 ETF 1.14.13.25 GO:0015049 ... Q603F1 38187819
    853774 8oyi:I (2.19) BS01 CU 1.14.18.3 N/A G1UBD1 38187819
    853775 8oyi:I (2.19) BS02 CU 1.14.18.3 N/A G1UBD1 38187819
    853776 8oyi:K (2.19) BS01 CU 1.14.13.25 GO:0015049 ... Q603F1 38187819
    853777 8oyi:K (2.19) BS02 HXG 1.14.13.25 GO:0015049 ... Q603F1 38187819
    853778 8oyi:K (2.19) BS03 HXG 1.14.13.25 GO:0015049 ... Q603F1 38187819
    853779 8oyi:K (2.19) BS04 ETF 1.14.13.25 GO:0015049 ... Q603F1 38187819
    853780 8oyk:A (1.9) BS01 peptide ? N/A Q15468 37834064
    853781 8oyk:B (1.9) BS01 peptide ? N/A Q15468 37834064
    853782 8oyk:B (1.9) BS02 peptide ? N/A Q15468 37834064
    853783 8oyk:C (1.9) BS01 peptide ? N/A Q15468 37834064
    853784 8oyk:F (1.9) BS01 peptide ? N/A Q15468 37834064
    853785 8oyq:A (1.8) BS01 W6T 2.7.13.3 GO:0016310 ... Q56310 N/A
    853786 8oyq:B (1.8) BS01 W6T 2.7.13.3 GO:0016310 ... Q56310 N/A
    853787 8oyz:A (1.85) BS01 WXC 2.7.13.3 GO:0016310 ... Q56310 N/A
    853788 8oyz:B (1.85) BS01 WXC 2.7.13.3 GO:0016310 ... Q56310 N/A
    853789 8oz0:D (3.5) BS01 rna ? GO:0000423 ... P05198 38287194
    853790 8oz0:D (3.5) BS02 rna ? GO:0000423 ... P05198 38287194
    853791 8oz0:E (3.5) BS01 rna 3.6.5.3 GO:0000049 ... P41091 38287194
    853792 8oz0:G (3.5) BS01 rna ? GO:0003723 ... P47813 38287194
    853793 8oz0:G (3.5) BS02 rna ? GO:0003723 ... P47813 38287194
    853794 8oz0:H (3.5) BS01 rna ? GO:0001732 ... P55010 38287194
    853795 8oz0:H (3.5) BS02 rna ? GO:0001732 ... P55010 38287194
    853796 8oz0:I (3.5) BS01 rna ? GO:0001732 ... P55884 38287194
    853797 8oz0:J (3.5) BS01 rna ? GO:0001732 ... Q99613 38287194
    853798 8oz0:J (3.5) BS02 rna ? GO:0001732 ... Q99613 38287194
    853799 8oz0:L (3.5) BS01 rna ? GO:0002181 ... P62081 38287194
    853800 8oz0:M (3.5) BS01 rna ? GO:0002181 ... P42677 38287194

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).