SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    853801 8pey:J (3.0) BS01 AGS N/A GO:0003676 ... P0AG30 39788982
    853802 8pey:J (3.0) BS02 AGS N/A GO:0003676 ... P0AG30 39788982
    853803 8pey:K (3.0) BS01 AGS N/A GO:0003676 ... P0AG30 39788982
    853804 8pey:K (3.0) BS02 AGS N/A GO:0003676 ... P0AG30 39788982
    853805 8pey:L (3.0) BS01 AGS N/A GO:0003676 ... P0AG30 39788982
    853806 8pey:M (3.0) BS01 AGS N/A GO:0003676 ... P0AG30 39788982
    853807 8pey:M (3.0) BS02 AGS N/A GO:0003676 ... P0AG30 39788982
    853808 8pey:N (3.0) BS01 AGS N/A GO:0003676 ... P0AG30 39788982
    853809 8pf0:A (2.2) BS01 CU N/A N/A N/A 39068227
    853810 8pf0:A (2.2) BS02 CU N/A N/A N/A 39068227
    853811 8pf2:A (2.1) BS01 RCO N/A GO:0016310 ... Q56310 38917423
    853812 8pf2:B (2.1) BS01 RCO N/A GO:0016310 ... Q56310 38917423
    853813 8pf3:A (2.15) BS01 FAD 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853814 8pf3:A (2.15) BS02 YJ6 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853815 8pf3:A (2.15) BS03 YJ6 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853816 8pf3:B (2.15) BS01 YJ6 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853817 8pf3:B (2.15) BS02 FAD 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853818 8pf3:B (2.15) BS03 YJ6 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853819 8pf3:C (2.15) BS01 FAD 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853820 8pf3:C (2.15) BS02 YJ6 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853821 8pf3:C (2.15) BS03 YJ6 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853822 8pf3:D (2.15) BS01 YJ6 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853823 8pf3:D (2.15) BS02 FAD 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853824 8pf3:D (2.15) BS03 YJ6 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853825 8pf4:A (1.84) BS01 FAD 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853826 8pf4:A (1.84) BS02 YIA 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853827 8pf4:A (1.84) BS03 YIA 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853828 8pf4:B (1.84) BS01 YIA 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853829 8pf4:B (1.84) BS02 YIA 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853830 8pf4:B (1.84) BS03 FAD 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853831 8pf4:C (1.84) BS01 FAD 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853832 8pf4:C (1.84) BS02 YIA 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853833 8pf4:C (1.84) BS03 YIA 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853834 8pf4:D (1.84) BS01 YIA 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853835 8pf4:D (1.84) BS02 FAD 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853836 8pf4:D (1.84) BS03 YIA 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853837 8pf5:A (2.42) BS01 FAD 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853838 8pf5:A (2.42) BS02 YJK 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853839 8pf5:A (2.42) BS03 YJK 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853840 8pf5:B (2.42) BS01 YJK 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853841 8pf5:B (2.42) BS02 FAD 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853842 8pf5:B (2.42) BS03 YJK 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853843 8pf5:C (2.42) BS01 FAD 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853844 8pf5:C (2.42) BS02 YJK 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853845 8pf5:C (2.42) BS03 YJK 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853846 8pf5:D (2.42) BS01 YJK 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853847 8pf5:D (2.42) BS02 FAD 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853848 8pf5:D (2.42) BS03 YJK 1.8.1.12 GO:0000166 ... Q389T8 38164929
    853849 8pf8:A (2.23) BS01 YMK 1.1.1.35 GO:0000166 ... O53872 39012716
    853850 8pf8:A (2.23) BS02 YLZ 1.1.1.35 GO:0000166 ... O53872 39012716
    853851 8pf8:A (2.23) BS03 JXL 1.1.1.35 GO:0000166 ... O53872 39012716
    853852 8pf8:A (2.23) BS04 JXL 1.1.1.35 GO:0000166 ... O53872 39012716
    853853 8pf8:A (2.23) BS05 YLN 1.1.1.35 GO:0000166 ... O53872 39012716
    853854 8pf8:B (2.23) BS01 YLZ 1.1.1.35 GO:0000166 ... O53872 39012716
    853855 8pf8:B (2.23) BS02 JXL 1.1.1.35 GO:0000166 ... O53872 39012716
    853856 8pf8:B (2.23) BS03 JXL 1.1.1.35 GO:0000166 ... O53872 39012716
    853857 8pf8:B (2.23) BS04 YLN 1.1.1.35 GO:0000166 ... O53872 39012716
    853858 8pf8:C (2.23) BS01 JXL 2.3.1.- GO:0003985 ... O53871 39012716
    853859 8pf8:D (2.23) BS01 JXL 2.3.1.- GO:0003985 ... O53871 39012716
    853860 8pf9:A (1.09) BS01 YJO ? GO:0030246 ... P17931 37878264
    853861 8pfa:A (1.8) BS01 C2E N/A N/A Q5SLC9 39615687
    853862 8pfa:B (1.8) BS01 C2E N/A N/A Q5SLC9 39615687
    853863 8pfc:B (2.2) BS01 ZN ? GO:0003677 ... Q9S758 38039272
    853864 8pfc:B (2.2) BS02 ZN ? GO:0003677 ... Q9S758 38039272
    853865 8pfc:D (2.2) BS01 ZN ? GO:0003677 ... Q9S758 38039272
    853866 8pfc:D (2.2) BS02 ZN ? GO:0003677 ... Q9S758 38039272
    853867 8pfc:F (2.2) BS01 ZN ? GO:0003677 ... Q9S758 38039272
    853868 8pfc:F (2.2) BS02 ZN ? GO:0003677 ... Q9S758 38039272
    853869 8pfc:H (2.2) BS01 ZN ? GO:0003677 ... Q9S758 38039272
    853870 8pfc:H (2.2) BS02 ZN ? GO:0003677 ... Q9S758 38039272
    853871 8pfc:J (2.2) BS01 ZN ? GO:0003677 ... Q9S758 38039272
    853872 8pfc:J (2.2) BS02 ZN ? GO:0003677 ... Q9S758 38039272
    853873 8pfc:L (2.2) BS01 ZN ? GO:0003677 ... Q9S758 38039272
    853874 8pfc:L (2.2) BS02 ZN ? GO:0003677 ... Q9S758 38039272
    853875 8pfc:N (2.2) BS01 ZN ? GO:0003677 ... Q9S758 38039272
    853876 8pfc:N (2.2) BS02 ZN ? GO:0003677 ... Q9S758 38039272
    853877 8pfc:P (2.2) BS01 ZN ? GO:0003677 ... Q9S758 38039272
    853878 8pfc:P (2.2) BS02 ZN ? GO:0003677 ... Q9S758 38039272
    853879 8pfe:A (1.35) BS01 peptide ? N/A O14786 37513474
    853880 8pfe:C (1.35) BS01 peptide ? N/A O14786 37513474
    853881 8pff:A (1.08) BS01 YJF ? GO:0030246 ... P17931 37878264
    853882 8pfg:I (3.1) BS01 rna 2.7.7.6 GO:0000345 ... P0A8V2 38589445
    853883 8pfg:I (3.1) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 38589445
    853884 8pfg:I (3.1) BS03 dna 2.7.7.6 GO:0000345 ... P0A8V2 38589445
    853885 8pfg:J (3.1) BS01 rna 2.7.7.6 GO:0000287 ... P0A8T7 38589445
    853886 8pfg:J (3.1) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 38589445
    853887 8pfg:J (3.1) BS03 dna 2.7.7.6 GO:0000287 ... P0A8T7 38589445
    853888 8pfg:J (3.1) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 38589445
    853889 8pfg:J (3.1) BS05 MG 2.7.7.6 GO:0000287 ... P0A8T7 38589445
    853890 8pfg:P (3.1) BS01 dna ? GO:0001000 ... P0AFW0 38589445
    853891 8pfh:A (3.24) BS01 GDP ? GO:0000144 ... P25342 38184752
    853892 8pfh:A (3.24) BS02 GDP ? GO:0000144 ... P25342 38184752
    853893 8pfh:B (3.24) BS01 GDP ? GO:0005525 ... P32457 38184752
    853894 8pfh:B (3.24) BS02 GDP ? GO:0005525 ... P32457 38184752
    853895 8pfh:C (3.24) BS01 GDP ? GO:0005525 ... P32468 38184752
    853896 8pfh:C (3.24) BS02 GDP ? GO:0005525 ... P32468 38184752
    853897 8pfh:D (3.24) BS01 GDP ? GO:0005525 ... Q07657 38184752
    853898 8pfh:D (3.24) BS02 GDP ? GO:0005525 ... Q07657 38184752
    853899 8pfi:A (2.785) BS01 YHG ? GO:0002224 ... Q9NR97 37583811
    853900 8pfi:A (2.785) BS02 YHG ? GO:0002224 ... Q9NR97 37583811
    853901 8pfi:B (2.785) BS01 YHG ? GO:0002224 ... Q9NR97 37583811
    853902 8pfi:B (2.785) BS02 YHG ? GO:0002224 ... Q9NR97 37583811
    853903 8pfj:I (3.4) BS01 rna 2.7.7.6 GO:0000345 ... P0A8V2 38589445
    853904 8pfj:I (3.4) BS02 dna 2.7.7.6 GO:0000345 ... P0A8V2 38589445
    853905 8pfj:I (3.4) BS03 dna 2.7.7.6 GO:0000345 ... P0A8V2 38589445
    853906 8pfj:J (3.4) BS01 rna 2.7.7.6 GO:0000287 ... P0A8T7 38589445
    853907 8pfj:J (3.4) BS02 dna 2.7.7.6 GO:0000287 ... P0A8T7 38589445
    853908 8pfj:J (3.4) BS03 dna 2.7.7.6 GO:0000287 ... P0A8T7 38589445
    853909 8pfj:J (3.4) BS04 ZN 2.7.7.6 GO:0000287 ... P0A8T7 38589445
    853910 8pfj:J (3.4) BS05 ZN 2.7.7.6 GO:0000287 ... P0A8T7 38589445
    853911 8pfj:J (3.4) BS06 MG 2.7.7.6 GO:0000287 ... P0A8T7 38589445
    853912 8pfj:P (3.4) BS01 dna ? GO:0001000 ... P0AFW0 38589445
    853913 8pfl:A (1.8) BS01 ZN 3.1.-.-
    5.6.2.4
    GO:0003676 ... Q14191 38658754
    853914 8pfl:A (1.8) BS02 YH8 3.1.-.-
    5.6.2.4
    GO:0003676 ... Q14191 38658754
    853915 8pfo:A (1.9) BS01 ZN 3.1.-.-
    5.6.2.4
    GO:0003676 ... Q14191 38658754
    853916 8pfo:A (1.9) BS02 YHC 3.1.-.-
    5.6.2.4
    GO:0003676 ... Q14191 38658754
    853917 8pfp:A (1.6) BS01 ZN 3.1.-.-
    5.6.2.4
    GO:0003676 ... Q14191 38658754
    853918 8pfp:A (1.6) BS02 AGS 3.1.-.-
    5.6.2.4
    GO:0003676 ... Q14191 38658754
    853919 8pfr:JT (2.15) BS01 rna N/A GO:0002181 ... Q12690 39041433
    853920 8pfr:JT (2.15) BS02 rna N/A GO:0002181 ... Q12690 39041433
    853921 8pfr:JU (2.15) BS01 rna N/A GO:0000027 ... P36105 39041433
    853922 8pfr:JV (2.15) BS01 rna N/A GO:0002181 ... P05748 39041433
    853923 8pfr:JV (2.15) BS02 rna N/A GO:0002181 ... P05748 39041433
    853924 8pfr:JW (2.15) BS01 rna N/A GO:0000470 ... P26784 39041433
    853925 8pfr:LF (2.15) BS01 rna N/A GO:0002181 ... P0CX45 39041433
    853926 8pfr:LG (2.15) BS01 rna N/A GO:0000027 ... P14126 39041433
    853927 8pfr:LH (2.15) BS01 rna N/A GO:0002181 ... P10664 39041433
    853928 8pfr:LH (2.15) BS02 rna N/A GO:0002181 ... P10664 39041433
    853929 8pfr:LH (2.15) BS03 MG N/A GO:0002181 ... P10664 39041433
    853930 8pfr:LH (2.15) BS04 MG N/A GO:0002181 ... P10664 39041433
    853931 8pfr:LI (2.15) BS01 rna N/A GO:0000027 ... P26321 39041433
    853932 8pfr:LI (2.15) BS02 rna N/A GO:0000027 ... P26321 39041433
    853933 8pfr:LJ (2.15) BS01 rna N/A GO:0000027 ... Q02326 39041433
    853934 8pfr:LK (2.15) BS01 rna N/A GO:0000463 ... P05737 39041433
    853935 8pfr:LK (2.15) BS02 rna N/A GO:0000463 ... P05737 39041433
    853936 8pfr:LL (2.15) BS01 rna N/A GO:0000470 ... P17076 39041433
    853937 8pfr:LL (2.15) BS02 rna N/A GO:0000470 ... P17076 39041433
    853938 8pfr:LM (2.15) BS01 rna N/A GO:0002181 ... P05738 39041433
    853939 8pfr:LN (2.15) BS01 rna N/A GO:0000027 ... P41805 39041433
    853940 8pfr:LN (2.15) BS02 rna N/A GO:0000027 ... P41805 39041433
    853941 8pfr:LN (2.15) BS03 MG N/A GO:0000027 ... P41805 39041433
    853942 8pfr:LN (2.15) BS04 MG N/A GO:0000027 ... P41805 39041433
    853943 8pfr:LO (2.15) BS01 rna N/A GO:0000027 ... P0C0W9 39041433
    853944 8pfr:LO (2.15) BS02 rna N/A GO:0000027 ... P0C0W9 39041433
    853945 8pfr:QO (2.15) BS01 rna N/A GO:0000448 ... P05740 39041433
    853946 8pfr:QO (2.15) BS02 rna N/A GO:0000448 ... P05740 39041433
    853947 8pfr:QP (2.15) BS01 rna N/A GO:0002181 ... P0CX49 39041433
    853948 8pfr:QQ (2.15) BS01 rna N/A GO:0002181 ... P0CX82 39041433
    853949 8pfr:QS (2.15) BS01 rna N/A GO:0002181 ... P0CX23 39041433
    853950 8pfr:QS (2.15) BS02 rna N/A GO:0002181 ... P0CX23 39041433
    853951 8pfr:QT (2.15) BS01 rna N/A GO:0002181 ... Q02753 39041433
    853952 8pfr:QT (2.15) BS02 rna N/A GO:0002181 ... Q02753 39041433
    853953 8pfr:QU (2.15) BS01 rna N/A GO:0002181 ... P05749 39041433
    853954 8pfr:QV (2.15) BS01 rna N/A GO:0002181 ... P0CX41 39041433
    853955 8pfr:QW (2.15) BS01 rna N/A GO:0002181 ... P04449 39041433
    853956 8pfr:QX (2.15) BS01 rna N/A GO:0000027 ... P04456 39041433
    853957 8pfr:QX (2.15) BS02 rna N/A GO:0000027 ... P04456 39041433
    853958 8pfr:QY (2.15) BS01 rna N/A GO:0002181 ... P05743 39041433
    853959 8pfr:QY (2.15) BS02 rna N/A GO:0002181 ... P05743 39041433
    853960 8pfr:QZ (2.15) BS01 rna N/A GO:0002181 ... P0C2H6 39041433
    853961 8pfr:RA (2.15) BS01 rna N/A GO:0002181 ... P02406 39041433
    853962 8pfr:RA (2.15) BS02 MG N/A GO:0002181 ... P02406 39041433
    853963 8pfr:RB (2.15) BS01 rna N/A GO:0002181 ... P05747 39041433
    853964 8pfr:RC (2.15) BS01 rna N/A GO:0002181 ... P14120 39041433
    853965 8pfr:RD (2.15) BS01 rna N/A GO:0002181 ... P0C2H8 39041433
    853966 8pfr:RE (2.15) BS01 rna N/A GO:0002181 ... P38061 39041433
    853967 8pfr:RE (2.15) BS02 MG N/A GO:0002181 ... P38061 39041433
    853968 8pfr:RF (2.15) BS01 rna N/A GO:0000027 ... P05744 39041433
    853969 8pfr:RG (2.15) BS01 rna N/A GO:0002181 ... P87262 39041433
    853970 8pfr:RG (2.15) BS02 ZN N/A GO:0002181 ... P87262 39041433
    853971 8pfr:RH (2.15) BS01 rna N/A GO:0000463 ... P0CX84 39041433
    853972 8pfr:RH (2.15) BS02 rna N/A GO:0000463 ... P0CX84 39041433
    853973 8pfr:RI (2.15) BS01 rna N/A GO:0002181 ... P05745 39041433
    853974 8pfr:RI (2.15) BS02 MG N/A GO:0002181 ... P05745 39041433
    853975 8pfr:RJ (2.15) BS01 rna N/A GO:0000448 ... P49166 39041433
    853976 8pfr:RJ (2.15) BS02 rna N/A GO:0000448 ... P49166 39041433
    853977 8pfr:RJ (2.15) BS03 ZN N/A GO:0000448 ... P49166 39041433
    853978 8pfr:RM (2.15) BS01 rna N/A GO:0002181 ... P49167 39041433
    853979 8pfr:RN (2.15) BS01 rna N/A GO:0002181 ... Q9CQD0 39041433
    853980 8pfr:RN (2.15) BS02 rna N/A GO:0002181 ... Q9CQD0 39041433
    853981 8pfr:RO (2.15) BS01 rna N/A GO:0000027 ... P0CH08 39041433
    853982 8pfr:RO (2.15) BS02 ZN N/A GO:0000027 ... P0CH08 39041433
    853983 8pfr:RQ (2.15) BS01 rna N/A GO:0002181 ... P0CX27 39041433
    853984 8pfr:RQ (2.15) BS02 ZN N/A GO:0002181 ... P0CX27 39041433
    853985 8pfr:RT (2.15) BS01 rna N/A GO:0002181 ... P0CX25 39041433
    853986 8pfr:RT (2.15) BS02 ZN N/A GO:0002181 ... P0CX25 39041433
    853987 8pfv:AAA (1.46) BS01 YMQ 3.2.1.17 GO:0003796 ... P00698 N/A
    853988 8pfw:A (1.12) BS01 YWR 3.2.1.17 GO:0003796 ... P00698 N/A
    853989 8pfw:A (1.12) BS02 YWR 3.2.1.17 GO:0003796 ... P00698 N/A
    853990 8pfw:A (1.12) BS03 YWR 3.2.1.17 GO:0003796 ... P00698 N/A
    853991 8pfx:A (1.03) BS01 YJT 3.2.1.17 GO:0003796 ... P00698 N/A
    853992 8pfz:A (1.78) BS01 YQI 2.3.1.179 GO:0004315 ... G3XDA2 N/A
    853993 8pfz:B (1.78) BS01 YQI 2.3.1.179 GO:0004315 ... G3XDA2 N/A
    853994 8pg0:A (2.97) BS01 BCT ? GO:0004867 ... Q9NPD5 37723174
    853995 8pg0:A (2.97) BS02 CLR ? GO:0004867 ... Q9NPD5 37723174
    853996 8pg0:A (2.97) BS03 CLR ? GO:0004867 ... Q9NPD5 37723174
    853997 8pg2:A (1.25) BS01 ZN N/A N/A Q9XAY4 N/A
    853998 8pg2:A (1.25) BS02 ZN N/A N/A Q9XAY4 N/A
    853999 8pg2:A (1.25) BS03 YLH N/A N/A Q9XAY4 N/A
    854000 8pg3:A (1.26) BS01 ZN N/A N/A Q9XAY4 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).