SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    854801 8p2k:An (2.9) BS01 rna ? GO:0003735 ... G1T1F0 37347872
    854802 8p2k:Ao (2.9) BS01 rna ? GO:0000028 ... G1U0Q2 37347872
    854803 8p2k:Ao (2.9) BS02 rna ? GO:0000028 ... G1U0Q2 37347872
    854804 8p2k:Ap (2.9) BS01 rna ? GO:0000462 ... G1SGX4 37347872
    854805 8p2k:Aq (2.9) BS01 rna ? GO:0003735 ... G1TU13 37347872
    854806 8p2k:Ar (2.9) BS01 rna ? GO:0003676 ... G1TPG3 37347872
    854807 8p2k:As (2.9) BS01 rna ? GO:0000028 ... G1TN62 37347872
    854808 8p2k:At (2.9) BS01 rna ? GO:0003723 ... G1SIZ2 37347872
    854809 8p2k:Av (2.9) BS01 rna ? GO:0003735 ... G1TG89 37347872
    854810 8p2k:Aw (2.9) BS01 rna ? GO:0003735 ... G1SZ47 37347872
    854811 8p2k:Ax (2.9) BS01 rna ? GO:0003735 ... A0A5F9D2E6 37347872
    854812 8p2k:Ay (2.9) BS01 rna ? GO:0003735 ... G1TDB3 37347872
    854813 8p2k:Ay (2.9) BS02 rna ? GO:0003735 ... G1TDB3 37347872
    854814 8p2k:BA (2.9) BS01 rna ? GO:0002181 ... F2X241 37347872
    854815 8p2k:BA (2.9) BS02 rna ? GO:0002181 ... F2X241 37347872
    854816 8p2k:BB (2.9) BS01 rna ? GO:0003723 ... G1TL06 37347872
    854817 8p2k:BC (2.9) BS01 rna ? GO:0003735 ... G1SVW5 37347872
    854818 8p2k:BC (2.9) BS02 rna ? GO:0003735 ... G1SVW5 37347872
    854819 8p2k:BC (2.9) BS03 peptide ? GO:0003735 ... G1SVW5 37347872
    854820 8p2k:BD (2.9) BS01 rna ? GO:0000027 ... P19949 37347872
    854821 8p2k:BD (2.9) BS02 rna ? GO:0000027 ... P19949 37347872
    854822 8p2k:BD (2.9) BS03 GTP ? GO:0000027 ... P19949 37347872
    854823 8p2k:BD (2.9) BS04 AAC ? GO:0000027 ... P19949 37347872
    854824 8p2k:BE (2.9) BS01 rna ? GO:0000027 ... G1SKF7 37347872
    854825 8p2k:BF (2.9) BS01 rna ? GO:0000463 ... G1SV32 37347872
    854826 8p2k:BF (2.9) BS02 rna ? GO:0000463 ... G1SV32 37347872
    854827 8p2k:BG (2.9) BS01 rna ? GO:0000470 ... P62424 37347872
    854828 8p2k:BG (2.9) BS02 rna ? GO:0000470 ... P62424 37347872
    854829 8p2k:BH (2.9) BS01 rna ? GO:0002181 ... G1SWI6 37347872
    854830 8p2k:BI (2.9) BS01 rna ? GO:0003735 ... B7NZQ2 37347872
    854831 8p2k:BI (2.9) BS02 rna ? GO:0003735 ... B7NZQ2 37347872
    854832 8p2k:BI (2.9) BS03 rna ? GO:0003735 ... B7NZQ2 37347872
    854833 8p2k:BJ (2.9) BS01 rna ? GO:0003735 ... G1TUB8 37347872
    854834 8p2k:BJ (2.9) BS02 rna ? GO:0003735 ... G1TUB8 37347872
    854835 8p2k:BJ (2.9) BS03 rna ? GO:0003735 ... G1TUB8 37347872
    854836 8p2k:BL (2.9) BS01 rna ? GO:0003723 ... G1TKB3 37347872
    854837 8p2k:BL (2.9) BS02 rna ? GO:0003723 ... G1TKB3 37347872
    854838 8p2k:BM (2.9) BS01 rna ? GO:0003723 ... G1SZ12 37347872
    854839 8p2k:BN (2.9) BS01 rna ? GO:0002181 ... G1T0C1 37347872
    854840 8p2k:BN (2.9) BS02 rna ? GO:0002181 ... G1T0C1 37347872
    854841 8p2k:BO (2.9) BS01 rna ? GO:0003729 ... G1TVS8 37347872
    854842 8p2k:BP (2.9) BS01 rna ? GO:0002181 ... G1SCJ6 37347872
    854843 8p2k:BP (2.9) BS02 rna ? GO:0002181 ... G1SCJ6 37347872
    854844 8p2k:BP (2.9) BS03 peptide ? GO:0002181 ... G1SCJ6 37347872
    854845 8p2k:BQ (2.9) BS01 rna ? GO:0003723 ... G1TFE0 37347872
    854846 8p2k:BR (2.9) BS01 rna ? GO:0003723 ... G1TYL6 37347872
    854847 8p2k:BR (2.9) BS02 rna ? GO:0003723 ... G1TYL6 37347872
    854848 8p2k:BS (2.9) BS01 rna ? GO:0003735 ... G1TTY7 37347872
    854849 8p2k:BS (2.9) BS02 rna ? GO:0003735 ... G1TTY7 37347872
    854850 8p2k:BT (2.9) BS01 rna ? GO:0003735 ... G1SHQ2 37347872
    854851 8p2k:BT (2.9) BS02 rna ? GO:0003735 ... G1SHQ2 37347872
    854852 8p2k:BU (2.9) BS01 rna ? GO:0002181 ... G1TSG1 37347872
    854853 8p2k:BV (2.9) BS01 rna ? GO:0000122 ... G1T6D1 37347872
    854854 8p2k:BW (2.9) BS01 rna ? GO:0002181 ... G1SE28 37347872
    854855 8p2k:BW (2.9) BS02 rna ? GO:0002181 ... G1SE28 37347872
    854856 8p2k:BX (2.9) BS01 rna ? GO:0003735 ... G1SE76 37347872
    854857 8p2k:BX (2.9) BS02 rna ? GO:0003735 ... G1SE76 37347872
    854858 8p2k:BY (2.9) BS01 rna ? GO:0003723 ... G1SQH0 37347872
    854859 8p2k:BY (2.9) BS02 rna ? GO:0003723 ... G1SQH0 37347872
    854860 8p2k:BZ (2.9) BS01 rna ? GO:0002181 ... G1TXF6 37347872
    854861 8p2k:Ba (2.9) BS01 rna ? GO:0003735 ... G1SNY0 37347872
    854862 8p2k:Bb (2.9) BS01 rna ? GO:0002181 ... G1SGR6 37347872
    854863 8p2k:Bc (2.9) BS01 rna ? GO:0003723 ... G1TDL2 37347872
    854864 8p2k:Bc (2.9) BS02 rna ? GO:0003723 ... G1TDL2 37347872
    854865 8p2k:Bd (2.9) BS01 rna ? GO:0002181 ... G1SHG0 37347872
    854866 8p2k:Be (2.9) BS01 rna ? GO:0003735 ... G1TUN8 37347872
    854867 8p2k:Bf (2.9) BS01 rna ? GO:0003735 ... G1SF08 37347872
    854868 8p2k:Bg (2.9) BS01 rna ? GO:0003735 ... G1TXG5 37347872
    854869 8p2k:Bg (2.9) BS02 ZN ? GO:0003735 ... G1TXG5 37347872
    854870 8p2k:Bh (2.9) BS01 rna ? GO:0000463 ... G1SIT5 37347872
    854871 8p2k:Bh (2.9) BS02 rna ? GO:0000463 ... G1SIT5 37347872
    854872 8p2k:Bi (2.9) BS01 rna ? GO:0003735 ... G1TTQ5 37347872
    854873 8p2k:Bj (2.9) BS01 rna ? GO:0002181 ... U3KPD5 37347872
    854874 8p2k:Bj (2.9) BS02 rna ? GO:0002181 ... U3KPD5 37347872
    854875 8p2k:Bj (2.9) BS03 ZN ? GO:0002181 ... U3KPD5 37347872
    854876 8p2k:Bk (2.9) BS01 rna ? GO:0003735 ... G1U001 37347872
    854877 8p2k:Bl (2.9) BS01 rna ? GO:0003735 ... G1SYU7 37347872
    854878 8p2k:Bl (2.9) BS02 rna ? GO:0003735 ... G1SYU7 37347872
    854879 8p2k:Bl (2.9) BS03 peptide ? GO:0003735 ... G1SYU7 37347872
    854880 8p2k:Bm (2.9) BS01 rna ? GO:0003735 ... A0A2I3MBB6 37347872
    854881 8p2k:Bm (2.9) BS02 ZN ? GO:0003735 ... A0A2I3MBB6 37347872
    854882 8p2k:Bo (2.9) BS01 rna ? GO:0003735 ... G1T040 37347872
    854883 8p2k:Bo (2.9) BS02 rna ? GO:0003735 ... G1T040 37347872
    854884 8p2k:Bo (2.9) BS03 ZN ? GO:0003735 ... G1T040 37347872
    854885 8p2k:Bp (2.9) BS01 rna ? GO:0003735 ... G1SY53 37347872
    854886 8p2k:Bp (2.9) BS02 ZN ? GO:0003735 ... G1SY53 37347872
    854887 8p2k:Br (2.9) BS01 rna ? GO:0003735 ... G1U7L1 37347872
    854888 8p2k:Bs (2.9) BS01 rna ? GO:0000027 ... G1SPK4 37347872
    854889 8p2k:Bt (2.9) BS01 rna ? GO:0003735 ... G1SMR7 37347872
    854890 8p2k:Bv (2.9) BS01 rna ? GO:0003723 ... G1SKZ8 37347872
    854891 8p2k:Bv (2.9) BS02 N ? GO:0003723 ... G1SKZ8 37347872
    854892 8p2k:MA (2.9) BS01 rna 3.4.11.18 GO:0004177 ... P53582 37347872
    854893 8p2k:Na (2.9) BS01 rna ? GO:0000122 ... Q13765 37347872
    854894 8p2k:Nb (2.9) BS01 rna ? N/A A0A7I2YQL2 37347872
    854895 8p2l:A (2.68) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1
    Q86DA5
    37635352
    854896 8p2l:B (2.68) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1
    Q86DA5
    37635352
    854897 8p2l:C (2.68) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1
    Q86DA5
    37635352
    854898 8p2l:D (2.68) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1
    Q86DA5
    37635352
    854899 8p2l:E (2.68) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1
    Q86DA5
    37635352
    854900 8p2l:F (2.68) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1
    Q86DA5
    37635352
    854901 8p2l:G (2.68) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1
    Q86DA5
    37635352
    854902 8p2l:H (2.68) BS01 NAD 3.2.2.-
    3.2.2.6
    GO:0003953 ... Q6SZW1
    Q86DA5
    37635352
    854903 8p2q:A (1.69) BS01 WRT 3.2.1.17 GO:0003796 ... P00698 38738452
    854904 8p2r:A (1.25) BS01 NAP 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    854905 8p2r:A (1.25) BS02 4G7 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54
    GO:0001523 ... P15121 N/A
    854906 8p2s:A (2.4) BS01 TTP 1.17.4.2 GO:0000166 ... A0A3E4SF67 38968292
    854907 8p2s:A (2.4) BS02 MG 1.17.4.2 GO:0000166 ... A0A3E4SF67 38968292
    854908 8p2s:A (2.4) BS03 TTP 1.17.4.2 GO:0000166 ... A0A3E4SF67 38968292
    854909 8p2s:B (2.4) BS01 TTP 1.17.4.2 GO:0000166 ... A0A3E4SF67 38968292
    854910 8p2s:B (2.4) BS02 MG 1.17.4.2 GO:0000166 ... A0A3E4SF67 38968292
    854911 8p2s:B (2.4) BS03 TTP 1.17.4.2 GO:0000166 ... A0A3E4SF67 38968292
    854912 8p2s:B (2.4) BS04 GTP 1.17.4.2 GO:0000166 ... A0A3E4SF67 38968292
    854913 8p2s:B (2.4) BS05 ZN 1.17.4.2 GO:0000166 ... A0A3E4SF67 38968292
    854914 8p2u:A (1.4) BS01 SIW N/A N/A N/A N/A
    854915 8p2v:A (2.99) BS01 WKE ? GO:0007155 ... A0A9K2KM41 38499587
    854916 8p2w:C (3.76) BS01 peptide ? GO:0005298 ... Q9NP91 38951531
    854917 8p2x:A (3.59) BS01 MAN 3.4.17.-
    3.4.17.23
    GO:0000122 ... Q9BYF1 38951531
    854918 8p2x:A (3.59) BS02 ZN 3.4.17.-
    3.4.17.23
    GO:0000122 ... Q9BYF1 38951531
    854919 8p2x:B (3.59) BS01 MAN 3.4.17.-
    3.4.17.23
    GO:0000122 ... Q9BYF1 38951531
    854920 8p2x:B (3.59) BS02 ZN 3.4.17.-
    3.4.17.23
    GO:0000122 ... Q9BYF1 38951531
    854921 8p2y:A (3.46) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0000122 ... Q9BYF1 38951531
    854922 8p2y:B (3.46) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0000122 ... Q9BYF1 38951531
    854923 8p2z:C (3.5) BS01 peptide ? GO:0005298 ... Q9NP91 38951531
    854924 8p2z:C (3.5) BS02 YCP ? GO:0005298 ... Q9NP91 38951531
    854925 8p30:A (3.29) BS01 MAN 3.4.17.-
    3.4.17.23
    GO:0000122 ... Q9BYF1 38951531
    854926 8p30:A (3.29) BS02 ZN 3.4.17.-
    3.4.17.23
    GO:0000122 ... Q9BYF1 38951531
    854927 8p30:B (3.29) BS01 MAN 3.4.17.-
    3.4.17.23
    GO:0000122 ... Q9BYF1 38951531
    854928 8p30:B (3.29) BS02 ZN 3.4.17.-
    3.4.17.23
    GO:0000122 ... Q9BYF1 38951531
    854929 8p30:C (3.29) BS01 YCP ? GO:0005298 ... Q9NP91 38951531
    854930 8p30:D (3.29) BS01 YCP ? GO:0005298 ... Q9NP91 38951531
    854931 8p31:A (3.24) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0000122 ... Q9BYF1 38951531
    854932 8p31:B (3.24) BS01 ZN 3.4.17.-
    3.4.17.23
    GO:0000122 ... Q9BYF1 38951531
    854933 8p31:C (3.24) BS01 YCP ? GO:0005298 ... Q9NP91 38951531
    854934 8p31:D (3.24) BS01 YCP ? GO:0005298 ... Q9NP91 38951531
    854935 8p36:A (2.51) BS01 B6D ? GO:0007155 ... A0A9K2KM41 38499587
    854936 8p37:A (1.219) BS01 XMP ? GO:0003824 ... P73853 37875114
    854937 8p37:A (1.219) BS02 NAD ? GO:0003824 ... P73853 37875114
    854938 8p39:A (2.58) BS01 DGT 1.17.4.2 GO:0000166 ... A0A3E4SF67 38968292
    854939 8p39:A (2.58) BS02 DGT 1.17.4.2 GO:0000166 ... A0A3E4SF67 38968292
    854940 8p39:B (2.58) BS01 DGT 1.17.4.2 GO:0000166 ... A0A3E4SF67 38968292
    854941 8p39:B (2.58) BS02 DGT 1.17.4.2 GO:0000166 ... A0A3E4SF67 38968292
    854942 8p39:B (2.58) BS03 ATP 1.17.4.2 GO:0000166 ... A0A3E4SF67 38968292
    854943 8p39:B (2.58) BS04 ZN 1.17.4.2 GO:0000166 ... A0A3E4SF67 38968292
    854944 8p3a:A (-1.00) BS01 CA 3.4.24.- GO:0003824 ... Q6QGP7 37686055
    854945 8p3b:A (3.15) BS01 G3P ? GO:0007155 ... Q59621 38499587
    854946 8p3b:A (3.15) BS02 WKE ? GO:0007155 ... Q59621 38499587
    854947 8p3c:B (2.02) BS01 WRX 5.2.1.8 GO:0003755 ... Q63J95 39976355
    854948 8p3d:A (1.71) BS01 WS5 5.2.1.8 GO:0003755 ... Q09734 39976355
    854949 8p3e:B (1.75) BS01 WSI 2.4.1.-
    3.2.1.-
    3.2.1.45
    3.2.1.46
    GO:0004336 ... P04062 38381042
    854950 8p3g:A (2.13) BS01 GNP N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854951 8p3g:A (2.13) BS02 WTU N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854952 8p3g:A (2.13) BS03 MG N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854953 8p3g:B (2.13) BS01 GNP N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854954 8p3g:B (2.13) BS02 WTU N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854955 8p3g:B (2.13) BS03 MG N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854956 8p3h:A (2.76) BS01 GNP N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854957 8p3h:A (2.76) BS02 WTO N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854958 8p3h:A (2.76) BS03 MG N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854959 8p3h:A (2.76) BS04 WTO N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854960 8p3h:B (2.76) BS01 GNP N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854961 8p3h:B (2.76) BS02 WTO N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854962 8p3h:B (2.76) BS03 MG N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854963 8p3i:A (2.0) BS01 GNP N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854964 8p3i:A (2.0) BS02 WTK N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854965 8p3i:A (2.0) BS03 MG N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854966 8p3i:B (2.0) BS01 GNP N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854967 8p3i:B (2.0) BS02 WTK N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854968 8p3i:B (2.0) BS03 MG N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854969 8p3j:A (2.16) BS01 WT6 N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854970 8p3j:A (2.16) BS02 WT6 N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854971 8p3j:A (2.16) BS03 GNP N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854972 8p3j:A (2.16) BS04 MG N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854973 8p3j:B (2.16) BS01 WT6 N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854974 8p3j:B (2.16) BS02 GNP N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854975 8p3j:B (2.16) BS03 WT6 N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854976 8p3j:B (2.16) BS04 MG N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854977 8p3k:A (2.58) BS01 GNP N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854978 8p3k:A (2.58) BS02 WTB N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854979 8p3k:A (2.58) BS03 MG N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854980 8p3k:B (2.58) BS01 WTB N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854981 8p3k:B (2.58) BS02 GNP N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854982 8p3k:B (2.58) BS03 MG N/A GO:0003924 ... P51159
    Q9HCH5
    N/A
    854983 8p3l:A (1.8) BS01 CU ? N/A W0DP94 N/A
    854984 8p3l:A (1.8) BS02 CU ? N/A W0DP94 N/A
    854985 8p3l:D (1.8) BS01 CU ? N/A W0DP94 N/A
    854986 8p3l:D (1.8) BS02 CU ? N/A W0DP94 N/A
    854987 8p3l:G (1.8) BS01 CU ? N/A W0DP94 N/A
    854988 8p3l:G (1.8) BS02 CU ? N/A W0DP94 N/A
    854989 8p3l:J (1.8) BS01 CU ? N/A W0DP94 N/A
    854990 8p3l:J (1.8) BS02 CU ? N/A W0DP94 N/A
    854991 8p3m:2 (2.07) BS01 CU ? N/A W0DP94 N/A
    854992 8p3m:2 (2.07) BS02 CU ? N/A W0DP94 N/A
    854993 8p3m:5 (2.07) BS01 CU ? N/A W0DP94 N/A
    854994 8p3m:5 (2.07) BS02 CU ? N/A W0DP94 N/A
    854995 8p3m:8 (2.07) BS01 CU ? N/A W0DP94 N/A
    854996 8p3m:8 (2.07) BS02 CU ? N/A W0DP94 N/A
    854997 8p3m:A (2.07) BS01 CU ? N/A W0DP94 N/A
    854998 8p3m:A (2.07) BS02 CU ? N/A W0DP94 N/A
    854999 8p3m:D (2.07) BS01 CU ? N/A W0DP94 N/A
    855000 8p3m:D (2.07) BS02 CU ? N/A W0DP94 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).