SEQ2FUN

BioLiP
Download all results in tab-seperated text for 1072681 receptor-ligand interactions, whose format is explained at readme.txt.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    855201 8p4p:N (9.6) BS01 ADP N/A GO:0005524 ... N/A 39169181
    855202 8p4q:A (1.88) BS01 IMP ? GO:0003824 ... P73853 37875114
    855203 8p4q:A (1.88) BS02 XMP ? GO:0003824 ... P73853 37875114
    855204 8p4q:B (1.88) BS01 IMP ? GO:0003824 ... P73853 37875114
    855205 8p4q:B (1.88) BS02 XMP ? GO:0003824 ... P73853 37875114
    855206 8p4q:C (1.88) BS01 IMP ? GO:0003824 ... P73853 37875114
    855207 8p4q:C (1.88) BS02 XMP ? GO:0003824 ... P73853 37875114
    855208 8p4q:D (1.88) BS01 IMP ? GO:0003824 ... P73853 37875114
    855209 8p4q:D (1.88) BS02 XMP ? GO:0003824 ... P73853 37875114
    855210 8p4q:E (1.88) BS01 IMP ? GO:0003824 ... P73853 37875114
    855211 8p4q:E (1.88) BS02 XMP ? GO:0003824 ... P73853 37875114
    855212 8p4q:F (1.88) BS01 IMP ? GO:0003824 ... P73853 37875114
    855213 8p4q:F (1.88) BS02 XMP ? GO:0003824 ... P73853 37875114
    855214 8p4q:G (1.88) BS01 IMP ? GO:0003824 ... P73853 37875114
    855215 8p4q:G (1.88) BS02 XMP ? GO:0003824 ... P73853 37875114
    855216 8p4q:H (1.88) BS01 IMP ? GO:0003824 ... P73853 37875114
    855217 8p4q:H (1.88) BS02 XMP ? GO:0003824 ... P73853 37875114
    855218 8p4r:A (11.9) BS01 ATP N/A GO:0005524 ... N/A 39169181
    855219 8p4r:B (11.9) BS01 ATP N/A GO:0005524 ... N/A 39169181
    855220 8p4r:C (11.9) BS01 ATP N/A GO:0005524 ... N/A 39169181
    855221 8p4r:D (11.9) BS01 ATP N/A GO:0005524 ... N/A 39169181
    855222 8p4r:E (11.9) BS01 ATP N/A GO:0005524 ... N/A 39169181
    855223 8p4r:F (11.9) BS01 ATP N/A GO:0005524 ... N/A 39169181
    855224 8p4r:G (11.9) BS01 ATP N/A GO:0005524 ... N/A 39169181
    855225 8p4r:H (11.9) BS01 ATP N/A GO:0005524 ... N/A 39169181
    855226 8p4r:I (11.9) BS01 ATP N/A GO:0005524 ... N/A 39169181
    855227 8p4r:J (11.9) BS01 ATP N/A GO:0005524 ... N/A 39169181
    855228 8p4r:K (11.9) BS01 ATP N/A GO:0005524 ... N/A 39169181
    855229 8p4r:L (11.9) BS01 ATP N/A GO:0005524 ... N/A 39169181
    855230 8p4r:M (11.9) BS01 ATP N/A GO:0005524 ... N/A 39169181
    855231 8p4r:N (11.9) BS01 ATP N/A GO:0005524 ... N/A 39169181
    855232 8p4v:0 (3.16) BS01 rna N/A GO:0002181 ... P0CX23 40119759
    855233 8p4v:0 (3.16) BS02 rna N/A GO:0002181 ... P0CX23 40119759
    855234 8p4v:2 (3.16) BS01 rna N/A GO:0002181 ... Q02753 40119759
    855235 8p4v:2 (3.16) BS02 rna N/A GO:0002181 ... Q02753 40119759
    855236 8p4v:2 (3.16) BS03 OHX N/A GO:0002181 ... Q02753 40119759
    855237 8p4v:5 (3.16) BS01 rna N/A GO:0002181 ... P05749 40119759
    855238 8p4v:6 (3.16) BS01 rna N/A GO:0002181 ... P0CX41 40119759
    855239 8p4v:6 (3.16) BS02 rna N/A GO:0002181 ... P0CX41 40119759
    855240 8p4v:7 (3.16) BS01 rna N/A GO:0002181 ... P04449 40119759
    855241 8p4v:8 (3.16) BS01 rna N/A GO:0000027 ... P04456 40119759
    855242 8p4v:8 (3.16) BS02 rna N/A GO:0000027 ... P04456 40119759
    855243 8p4v:9 (3.16) BS01 rna N/A GO:0002181 ... P05743 40119759
    855244 8p4v:9 (3.16) BS02 rna N/A GO:0002181 ... P05743 40119759
    855245 8p4v:AA (3.16) BS01 rna N/A GO:0002181 ... P0C2H6 40119759
    855246 8p4v:AB (3.16) BS01 rna N/A GO:0002181 ... P02406 40119759
    855247 8p4v:AB (3.16) BS02 MG N/A GO:0002181 ... P02406 40119759
    855248 8p4v:AB (3.16) BS03 MG N/A GO:0002181 ... P02406 40119759
    855249 8p4v:AC (3.16) BS01 rna N/A GO:0002181 ... P05747 40119759
    855250 8p4v:AC (3.16) BS02 OHX N/A GO:0002181 ... P05747 40119759
    855251 8p4v:AD (3.16) BS01 rna N/A GO:0002181 ... P14120 40119759
    855252 8p4v:AE (3.16) BS01 rna N/A GO:0002181 ... P0C2H8 40119759
    855253 8p4v:AF (3.16) BS01 rna N/A GO:0002181 ... P38061 40119759
    855254 8p4v:AF (3.16) BS02 MG N/A GO:0002181 ... P38061 40119759
    855255 8p4v:AG (3.16) BS01 rna N/A GO:0000027 ... P05744 40119759
    855256 8p4v:AG (3.16) BS02 OHX N/A GO:0000027 ... P05744 40119759
    855257 8p4v:AH (3.16) BS01 rna N/A GO:0002181 ... P87262 40119759
    855258 8p4v:AI (3.16) BS01 rna N/A GO:0000463 ... P0CX84 40119759
    855259 8p4v:AI (3.16) BS02 rna N/A GO:0000463 ... P0CX84 40119759
    855260 8p4v:AJ (3.16) BS01 rna N/A GO:0000470 ... P05745 40119759
    855261 8p4v:AK (3.16) BS01 rna N/A GO:0000448 ... P49166 40119759
    855262 8p4v:AK (3.16) BS02 rna N/A GO:0000448 ... P49166 40119759
    855263 8p4v:AK (3.16) BS03 OHX N/A GO:0000448 ... P49166 40119759
    855264 8p4v:AK (3.16) BS04 MG N/A GO:0000448 ... P49166 40119759
    855265 8p4v:AK (3.16) BS05 ZN N/A GO:0000448 ... P49166 40119759
    855266 8p4v:AK (3.16) BS06 OHX N/A GO:0000448 ... P49166 40119759
    855267 8p4v:AK (3.16) BS07 OHX N/A GO:0000448 ... P49166 40119759
    855268 8p4v:AL (3.16) BS01 rna N/A GO:0002181 ... P49167 40119759
    855269 8p4v:AM (3.16) BS01 rna N/A GO:0002181 ... P04650 40119759
    855270 8p4v:AM (3.16) BS02 rna N/A GO:0002181 ... P04650 40119759
    855271 8p4v:AN (3.16) BS01 rna N/A GO:0000027 ... P0CH08 40119759
    855272 8p4v:AN (3.16) BS02 ZN N/A GO:0000027 ... P0CH08 40119759
    855273 8p4v:AP (3.16) BS01 rna N/A GO:0002181 ... P0CX27 40119759
    855274 8p4v:AP (3.16) BS02 X1K N/A GO:0002181 ... P0CX27 40119759
    855275 8p4v:AP (3.16) BS03 ZN N/A GO:0002181 ... P0CX27 40119759
    855276 8p4v:AP (3.16) BS04 OHX N/A GO:0002181 ... P0CX27 40119759
    855277 8p4v:AQ (3.16) BS01 rna N/A GO:0002181 ... P0CX25 40119759
    855278 8p4v:AQ (3.16) BS02 ZN N/A GO:0002181 ... P0CX25 40119759
    855279 8p4v:B (3.16) BS01 rna N/A GO:0000028 ... P32905 40119759
    855280 8p4v:C (3.16) BS01 rna N/A GO:0000462 ... P33442 40119759
    855281 8p4v:C (3.16) BS02 OHX N/A GO:0000462 ... P33442 40119759
    855282 8p4v:CD (3.16) BS01 rna N/A GO:0002181 ... P0CX45 40119759
    855283 8p4v:CD (3.16) BS02 rna N/A GO:0002181 ... P0CX45 40119759
    855284 8p4v:CD (3.16) BS03 OHX N/A GO:0002181 ... P0CX45 40119759
    855285 8p4v:CE (3.16) BS01 rna N/A GO:0000027 ... P14126 40119759
    855286 8p4v:CE (3.16) BS02 OHX N/A GO:0000027 ... P14126 40119759
    855287 8p4v:CE (3.16) BS03 MG N/A GO:0000027 ... P14126 40119759
    855288 8p4v:CF (3.16) BS01 rna N/A GO:0002181 ... P10664 40119759
    855289 8p4v:CF (3.16) BS02 rna N/A GO:0002181 ... P10664 40119759
    855290 8p4v:CG (3.16) BS01 rna N/A GO:0000027 ... P26321 40119759
    855291 8p4v:CG (3.16) BS02 rna N/A GO:0000027 ... P26321 40119759
    855292 8p4v:CG (3.16) BS03 OHX N/A GO:0000027 ... P26321 40119759
    855293 8p4v:CH (3.16) BS01 rna N/A GO:0000027 ... Q02326 40119759
    855294 8p4v:CI (3.16) BS01 rna N/A GO:0000463 ... P05737 40119759
    855295 8p4v:CI (3.16) BS02 rna N/A GO:0000463 ... P05737 40119759
    855296 8p4v:CI (3.16) BS03 OHX N/A GO:0000463 ... P05737 40119759
    855297 8p4v:CJ (3.16) BS01 rna N/A GO:0000470 ... P17076 40119759
    855298 8p4v:CJ (3.16) BS02 rna N/A GO:0000470 ... P17076 40119759
    855299 8p4v:CK (3.16) BS01 rna N/A GO:0002181 ... P05738 40119759
    855300 8p4v:CL (3.16) BS01 rna N/A GO:0000027 ... P41805 40119759
    855301 8p4v:CL (3.16) BS02 rna N/A GO:0000027 ... P41805 40119759
    855302 8p4v:CL (3.16) BS03 OHX N/A GO:0000027 ... P41805 40119759
    855303 8p4v:CL (3.16) BS04 OHX N/A GO:0000027 ... P41805 40119759
    855304 8p4v:CM (3.16) BS01 rna N/A GO:0000027 ... P0C0W9 40119759
    855305 8p4v:CM (3.16) BS02 rna N/A GO:0000027 ... P0C0W9 40119759
    855306 8p4v:CN (3.16) BS01 rna N/A GO:0002181 ... Q12690 40119759
    855307 8p4v:CN (3.16) BS02 rna N/A GO:0002181 ... Q12690 40119759
    855308 8p4v:CO (3.16) BS01 rna N/A GO:0000027 ... P36105 40119759
    855309 8p4v:CO (3.16) BS02 MG N/A GO:0000027 ... P36105 40119759
    855310 8p4v:CP (3.16) BS01 rna N/A GO:0000470 ... P05748 40119759
    855311 8p4v:CP (3.16) BS02 rna N/A GO:0000470 ... P05748 40119759
    855312 8p4v:CP (3.16) BS03 OHX N/A GO:0000470 ... P05748 40119759
    855313 8p4v:CP (3.16) BS04 MG N/A GO:0000470 ... P05748 40119759
    855314 8p4v:CQ (3.16) BS01 rna N/A GO:0000470 ... P26784 40119759
    855315 8p4v:CQ (3.16) BS02 MG N/A GO:0000470 ... P26784 40119759
    855316 8p4v:CR (3.16) BS01 rna N/A GO:0000448 ... P05740 40119759
    855317 8p4v:CR (3.16) BS02 rna N/A GO:0000448 ... P05740 40119759
    855318 8p4v:CS (3.16) BS01 rna N/A GO:0002181 ... P0CX49 40119759
    855319 8p4v:CT (3.16) BS01 rna N/A GO:0002181 ... P0CX82 40119759
    855320 8p4v:CT (3.16) BS02 rna N/A GO:0002181 ... P0CX82 40119759
    855321 8p4v:CU (3.16) BS01 rna N/A GO:0002181 ... P0CX23 40119759
    855322 8p4v:CU (3.16) BS02 rna N/A GO:0002181 ... P0CX23 40119759
    855323 8p4v:CV (3.16) BS01 rna N/A GO:0002181 ... Q02753 40119759
    855324 8p4v:CV (3.16) BS02 rna N/A GO:0002181 ... Q02753 40119759
    855325 8p4v:CV (3.16) BS03 MG N/A GO:0002181 ... Q02753 40119759
    855326 8p4v:CV (3.16) BS04 OHX N/A GO:0002181 ... Q02753 40119759
    855327 8p4v:CW (3.16) BS01 rna N/A GO:0002181 ... P05749 40119759
    855328 8p4v:CX (3.16) BS01 rna N/A GO:0002181 ... P0CX41 40119759
    855329 8p4v:CX (3.16) BS02 rna N/A GO:0002181 ... P0CX41 40119759
    855330 8p4v:CY (3.16) BS01 rna N/A GO:0002181 ... P04449 40119759
    855331 8p4v:CY (3.16) BS02 rna N/A GO:0002181 ... P04449 40119759
    855332 8p4v:CZ (3.16) BS01 rna N/A GO:0000027 ... P04456 40119759
    855333 8p4v:CZ (3.16) BS02 rna N/A GO:0000027 ... P04456 40119759
    855334 8p4v:D (3.16) BS01 rna N/A GO:0000054 ... P25443 40119759
    855335 8p4v:DA (3.16) BS01 rna N/A GO:0002181 ... P05743 40119759
    855336 8p4v:DA (3.16) BS02 rna N/A GO:0002181 ... P05743 40119759
    855337 8p4v:DB (3.16) BS01 rna N/A GO:0002181 ... P0C2H6 40119759
    855338 8p4v:DC (3.16) BS01 rna N/A GO:0002181 ... P02406 40119759
    855339 8p4v:DD (3.16) BS01 rna N/A GO:0002181 ... P05747 40119759
    855340 8p4v:DD (3.16) BS02 OHX N/A GO:0002181 ... P05747 40119759
    855341 8p4v:DE (3.16) BS01 rna N/A GO:0002181 ... P14120 40119759
    855342 8p4v:DF (3.16) BS01 rna N/A GO:0002181 ... P0C2H8 40119759
    855343 8p4v:DG (3.16) BS01 rna N/A GO:0002181 ... P38061 40119759
    855344 8p4v:DH (3.16) BS01 rna N/A GO:0000027 ... P05744 40119759
    855345 8p4v:DH (3.16) BS02 OHX N/A GO:0000027 ... P05744 40119759
    855346 8p4v:DH (3.16) BS03 MG N/A GO:0000027 ... P05744 40119759
    855347 8p4v:DI (3.16) BS01 rna N/A GO:0002181 ... P87262 40119759
    855348 8p4v:DJ (3.16) BS01 rna N/A GO:0000463 ... P0CX84 40119759
    855349 8p4v:DJ (3.16) BS02 rna N/A GO:0000463 ... P0CX84 40119759
    855350 8p4v:DK (3.16) BS01 rna N/A GO:0000470 ... P05745 40119759
    855351 8p4v:DL (3.16) BS01 rna N/A GO:0000448 ... P49166 40119759
    855352 8p4v:DL (3.16) BS02 rna N/A GO:0000448 ... P49166 40119759
    855353 8p4v:DL (3.16) BS03 OHX N/A GO:0000448 ... P49166 40119759
    855354 8p4v:DL (3.16) BS04 OHX N/A GO:0000448 ... P49166 40119759
    855355 8p4v:DL (3.16) BS05 ZN N/A GO:0000448 ... P49166 40119759
    855356 8p4v:DM (3.16) BS01 rna N/A GO:0002181 ... P49167 40119759
    855357 8p4v:DN (3.16) BS01 rna N/A GO:0002181 ... P04650 40119759
    855358 8p4v:DN (3.16) BS02 rna N/A GO:0002181 ... P04650 40119759
    855359 8p4v:DO (3.16) BS01 rna N/A GO:0000027 ... P0CH08 40119759
    855360 8p4v:DO (3.16) BS02 ZN N/A GO:0000027 ... P0CH08 40119759
    855361 8p4v:DQ (3.16) BS01 rna N/A GO:0002181 ... P0CX27 40119759
    855362 8p4v:DQ (3.16) BS02 X1K N/A GO:0002181 ... P0CX27 40119759
    855363 8p4v:DQ (3.16) BS03 ZN N/A GO:0002181 ... P0CX27 40119759
    855364 8p4v:DQ (3.16) BS04 OHX N/A GO:0002181 ... P0CX27 40119759
    855365 8p4v:DR (3.16) BS01 rna N/A GO:0002181 ... P0CX25 40119759
    855366 8p4v:DR (3.16) BS02 rna N/A GO:0002181 ... P0CX25 40119759
    855367 8p4v:DR (3.16) BS03 ZN N/A GO:0002181 ... P0CX25 40119759
    855368 8p4v:E (3.16) BS01 rna N/A GO:0000054 ... P05750 40119759
    855369 8p4v:F (3.16) BS01 rna N/A GO:0002181 ... P0CX35 40119759
    855370 8p4v:G (3.16) BS01 rna N/A GO:0000054 ... P26783 40119759
    855371 8p4v:H (3.16) BS01 rna N/A GO:0000462 ... P0CX37 40119759
    855372 8p4v:I (3.16) BS01 rna N/A GO:0002181 ... P26786 40119759
    855373 8p4v:J (3.16) BS01 rna N/A GO:0000462 ... P0CX39 40119759
    855374 8p4v:J (3.16) BS02 rna N/A GO:0000462 ... P0CX39 40119759
    855375 8p4v:J (3.16) BS03 OHX N/A GO:0000462 ... P0CX39 40119759
    855376 8p4v:K (3.16) BS01 rna N/A GO:0000462 ... O13516 40119759
    855377 8p4v:L (3.16) BS01 rna N/A GO:0000054 ... Q08745 40119759
    855378 8p4v:M (3.16) BS01 rna N/A GO:0000028 ... P0CX47 40119759
    855379 8p4v:N (3.16) BS01 rna N/A GO:0000028 ... P48589 40119759
    855380 8p4v:O (3.16) BS01 rna N/A GO:0000462 ... P05756 40119759
    855381 8p4v:O (3.16) BS02 rna N/A GO:0000462 ... P05756 40119759
    855382 8p4v:O (3.16) BS03 OHX N/A GO:0000462 ... P05756 40119759
    855383 8p4v:O (3.16) BS04 OHX N/A GO:0000462 ... P05756 40119759
    855384 8p4v:P (3.16) BS01 rna N/A GO:0000028 ... P06367 40119759
    855385 8p4v:Q (3.16) BS01 rna N/A GO:0000054 ... Q01855 40119759
    855386 8p4v:Q (3.16) BS02 rna N/A GO:0000054 ... Q01855 40119759
    855387 8p4v:Q (3.16) BS03 OHX N/A GO:0000054 ... Q01855 40119759
    855388 8p4v:R (3.16) BS01 rna N/A GO:0000462 ... P0CX51 40119759
    855389 8p4v:Rb (3.16) BS01 rna N/A GO:0001965 ... P38011 40119759
    855390 8p4v:Rb (3.16) BS02 OHX N/A GO:0001965 ... P38011 40119759
    855391 8p4v:S (3.16) BS01 rna N/A GO:0000028 ... P02407 40119759
    855392 8p4v:T (3.16) BS01 rna N/A GO:0000054 ... P0CX55 40119759
    855393 8p4v:T (3.16) BS02 OHX N/A GO:0000054 ... P0CX55 40119759
    855394 8p4v:U (3.16) BS01 rna N/A GO:0000054 ... P07280 40119759
    855395 8p4v:U (3.16) BS02 MG N/A GO:0000054 ... P07280 40119759
    855396 8p4v:V (3.16) BS01 rna N/A GO:0000462 ... P38701 40119759
    855397 8p4v:X (3.16) BS01 rna N/A GO:0002181 ... P0C0W1 40119759
    855398 8p4v:Y (3.16) BS01 rna N/A GO:0000462 ... P0CX29 40119759
    855399 8p4v:Z (3.16) BS01 rna N/A GO:0000462 ... P0CX31 40119759
    855400 8p4v:a (3.16) BS01 rna N/A GO:0002181 ... Q3E792 40119759

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).