SEQ2FUN

BioLiP
Download all results in tab-seperated text for 942758 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    855201 8pm9:A (1.85) BS01 ZP2 ? GO:0001523 ... P02766 37837673
    855202 8pm9:B (1.85) BS01 ZP2 ? GO:0001523 ... P02766 37837673
    855203 8pma:A (1.2) BS01 ZP2 ? GO:0001523 ... P02766 37837673
    855204 8pma:B (1.2) BS01 ZP2 ? GO:0001523 ... P02766 37837673
    855205 8pmc:A (1.85) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    855206 8pmc:A (1.85) BS02 dna N/A GO:0000981 ... Q9NY43 39753777
    855207 8pmc:A (1.85) BS03 dna N/A GO:0000981 ... Q9NY43 39753777
    855208 8pmc:C (1.85) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    855209 8pmc:C (1.85) BS02 dna N/A GO:0000981 ... Q9NY43 39753777
    855210 8pmc:E (1.85) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    855211 8pmc:E (1.85) BS02 dna N/A GO:0000981 ... Q9NY43 39753777
    855212 8pmc:E (1.85) BS03 dna N/A GO:0000981 ... Q9NY43 39753777
    855213 8pmc:G (1.85) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    855214 8pmc:G (1.85) BS02 dna N/A GO:0000981 ... Q9NY43 39753777
    855215 8pmd:A (2.95) BS01 ATP 7.6.2.- GO:0000139 ... O95342 37949847
    855216 8pmd:A (2.95) BS02 ATP 7.6.2.- GO:0000139 ... O95342 37949847
    855217 8pmd:A (2.95) BS03 MG 7.6.2.- GO:0000139 ... O95342 37949847
    855218 8pmd:A (2.95) BS04 MG 7.6.2.- GO:0000139 ... O95342 37949847
    855219 8pme:A (2.15) BS01 ATP ? N/A A0A8K1DE77 38600265
    855220 8pme:A (2.15) BS02 MG ? N/A A0A8K1DE77 38600265
    855221 8pme:B (2.15) BS01 ATP ? N/A A0A8K1DE77 38600265
    855222 8pme:B (2.15) BS02 MG ? N/A A0A8K1DE77 38600265
    855223 8pme:C (2.15) BS01 ATP ? N/A A0A8K1DE77 38600265
    855224 8pme:C (2.15) BS02 MG ? N/A A0A8K1DE77 38600265
    855225 8pmf:A (0.95) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    855226 8pmf:A (0.95) BS02 dna N/A GO:0000981 ... Q9NY43 39753777
    855227 8pmg:A (3.29) BS01 ATP ? N/A A0A8K1DE77 38600265
    855228 8pmg:A (3.29) BS02 MG ? N/A A0A8K1DE77 38600265
    855229 8pmg:B (3.29) BS01 ATP ? N/A A0A8K1DE77 38600265
    855230 8pmg:B (3.29) BS02 MG ? N/A A0A8K1DE77 38600265
    855231 8pmg:C (3.29) BS01 ATP ? N/A A0A8K1DE77 38600265
    855232 8pmg:C (3.29) BS02 MG ? N/A A0A8K1DE77 38600265
    855233 8pmg:D (3.29) BS01 ATP ? N/A A0A8K1DE77 38600265
    855234 8pmg:D (3.29) BS02 MG ? N/A A0A8K1DE77 38600265
    855235 8pmg:E (3.29) BS01 ATP ? N/A A0A8K1DE77 38600265
    855236 8pmg:E (3.29) BS02 MG ? N/A A0A8K1DE77 38600265
    855237 8pmg:F (3.29) BS01 ATP ? N/A A0A8K1DE77 38600265
    855238 8pmg:F (3.29) BS02 MG ? N/A A0A8K1DE77 38600265
    855239 8pmi:A (2.83) BS01 ATP ? N/A A0A8K1DE77 38600265
    855240 8pmi:A (2.83) BS02 MG ? N/A A0A8K1DE77 38600265
    855241 8pmi:B (2.83) BS01 ATP ? N/A A0A8K1DE77 38600265
    855242 8pmi:B (2.83) BS02 MG ? N/A A0A8K1DE77 38600265
    855243 8pmi:C (2.83) BS01 ATP ? N/A A0A8K1DE77 38600265
    855244 8pmi:C (2.83) BS02 MG ? N/A A0A8K1DE77 38600265
    855245 8pmi:D (2.83) BS01 ATP ? N/A A0A8K1DE77 38600265
    855246 8pmi:D (2.83) BS02 MG ? N/A A0A8K1DE77 38600265
    855247 8pmi:E (2.83) BS01 ATP ? N/A A0A8K1DE77 38600265
    855248 8pmi:E (2.83) BS02 MG ? N/A A0A8K1DE77 38600265
    855249 8pmi:F (2.83) BS01 ATP ? N/A A0A8K1DE77 38600265
    855250 8pmi:F (2.83) BS02 MG ? N/A A0A8K1DE77 38600265
    855251 8pmj:A (2.81) BS01 ATP 7.6.2.- GO:0000139 ... O95342 37949847
    855252 8pmj:A (2.81) BS02 CLR 7.6.2.- GO:0000139 ... O95342 37949847
    855253 8pmj:A (2.81) BS03 CLR 7.6.2.- GO:0000139 ... O95342 37949847
    855254 8pmj:A (2.81) BS04 ADP 7.6.2.- GO:0000139 ... O95342 37949847
    855255 8pmj:A (2.81) BS05 VO4 7.6.2.- GO:0000139 ... O95342 37949847
    855256 8pmj:A (2.81) BS06 MG 7.6.2.- GO:0000139 ... O95342 37949847
    855257 8pmj:A (2.81) BS07 MG 7.6.2.- GO:0000139 ... O95342 37949847
    855258 8pmk:A (2.43) BS01 BYN N/A GO:0005737 ... A0A193DUB4 N/A
    855259 8pmk:A (2.43) BS02 FE N/A GO:0005737 ... A0A193DUB4 N/A
    855260 8pmk:A (2.43) BS03 FE N/A GO:0005737 ... A0A193DUB4 N/A
    855261 8pmk:A (2.43) BS04 FE N/A GO:0005737 ... A0A193DUB4 N/A
    855262 8pmk:B (2.43) BS01 BYN N/A GO:0005737 ... A0A193DUB4 N/A
    855263 8pmk:B (2.43) BS02 FE N/A GO:0005737 ... A0A193DUB4 N/A
    855264 8pmk:B (2.43) BS03 FE N/A GO:0005737 ... A0A193DUB4 N/A
    855265 8pmk:B (2.43) BS04 FE N/A GO:0005737 ... A0A193DUB4 N/A
    855266 8pmk:C (2.43) BS01 BYN N/A GO:0005737 ... A0A193DUB4 N/A
    855267 8pmk:C (2.43) BS02 FE N/A GO:0005737 ... A0A193DUB4 N/A
    855268 8pmk:C (2.43) BS03 FE N/A GO:0005737 ... A0A193DUB4 N/A
    855269 8pmk:C (2.43) BS04 FE N/A GO:0005737 ... A0A193DUB4 N/A
    855270 8pmk:D (2.43) BS01 BYN N/A GO:0005737 ... A0A193DUB4 N/A
    855271 8pmk:D (2.43) BS02 FE N/A GO:0005737 ... A0A193DUB4 N/A
    855272 8pmk:D (2.43) BS03 FE N/A GO:0005737 ... A0A193DUB4 N/A
    855273 8pmk:D (2.43) BS04 FE N/A GO:0005737 ... A0A193DUB4 N/A
    855274 8pmk:E (2.43) BS01 BYN N/A GO:0005737 ... A0A193DUB4 N/A
    855275 8pmk:E (2.43) BS02 FE N/A GO:0005737 ... A0A193DUB4 N/A
    855276 8pmk:E (2.43) BS03 FE N/A GO:0005737 ... A0A193DUB4 N/A
    855277 8pmk:E (2.43) BS04 FE N/A GO:0005737 ... A0A193DUB4 N/A
    855278 8pmk:F (2.43) BS01 BYN N/A GO:0005737 ... A0A193DUB4 N/A
    855279 8pmk:F (2.43) BS02 FE N/A GO:0005737 ... A0A193DUB4 N/A
    855280 8pmk:F (2.43) BS03 FE N/A GO:0005737 ... A0A193DUB4 N/A
    855281 8pmk:F (2.43) BS04 FE N/A GO:0005737 ... A0A193DUB4 N/A
    855282 8pml:A (2.95) BS01 ATP ? N/A B4XT64 38600265
    855283 8pml:A (2.95) BS02 MG ? N/A B4XT64 38600265
    855284 8pml:B (2.95) BS01 ATP ? N/A B4XT64 38600265
    855285 8pml:B (2.95) BS02 MG ? N/A B4XT64 38600265
    855286 8pml:C (2.95) BS01 ATP ? N/A B4XT64 38600265
    855287 8pml:C (2.95) BS02 MG ? N/A B4XT64 38600265
    855288 8pml:D (2.95) BS01 ATP ? N/A B4XT64 38600265
    855289 8pml:D (2.95) BS02 MG ? N/A B4XT64 38600265
    855290 8pml:E (2.95) BS01 ATP ? N/A B4XT64 38600265
    855291 8pml:E (2.95) BS02 MG ? N/A B4XT64 38600265
    855292 8pml:F (2.95) BS01 ATP ? N/A B4XT64 38600265
    855293 8pml:F (2.95) BS02 MG ? N/A B4XT64 38600265
    855294 8pmm:A (1.75) BS01 ATP ? N/A B4XT64 38600265
    855295 8pmm:A (1.75) BS02 MG ? N/A B4XT64 38600265
    855296 8pmm:B (1.75) BS01 ATP ? N/A B4XT64 38600265
    855297 8pmm:B (1.75) BS02 MG ? N/A B4XT64 38600265
    855298 8pmm:C (1.75) BS01 ATP ? N/A B4XT64 38600265
    855299 8pmm:C (1.75) BS02 MG ? N/A B4XT64 38600265
    855300 8pmn:A (1.3) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    855301 8pmn:A (1.3) BS02 dna N/A GO:0000981 ... Q9NY43 39753777
    855302 8pmo:A (1.24) BS01 ZP2 ? GO:0001523 ... P02766 37837673
    855303 8pmo:B (1.24) BS01 ZP2 ? GO:0001523 ... P02766 37837673
    855304 8pmp:A (3.43) BS01 peptide ? GO:0000184 ... Q09161 38175753
    855305 8pmp:B (3.43) BS01 peptide ? GO:0000184 ... P52298 38175753
    855306 8pmp:B (3.43) BS02 MGT ? GO:0000184 ... P52298 38175753
    855307 8pmq:2 (3.53) BS01 ZN 2.3.2.27 GO:0004842 ... Q12508 38113892
    855308 8pmq:9 (3.53) BS01 ZN 2.3.2.27 GO:0004842 ... P40492 38113892
    855309 8pmr:B (1.94) BS01 MAN 3.2.2.-
    3.2.2.5
    GO:0050135 ... Q4WL81 37934975
    855310 8pms:D (2.4) BS01 FUC 3.2.2.-
    3.2.2.5
    GO:0050135 ... Q4WL81 37934975
    855311 8pmv:A (2.1) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    855312 8pmv:A (2.1) BS02 dna N/A GO:0000981 ... Q9NY43 39753777
    855313 8pmv:A (2.1) BS03 dna N/A GO:0000981 ... Q9NY43 39753777
    855314 8pmv:D (2.1) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    855315 8pmv:D (2.1) BS02 dna N/A GO:0000981 ... Q9NY43 39753777
    855316 8pmv:D (2.1) BS03 dna N/A GO:0000981 ... Q9NY43 39753777
    855317 8pmv:G (2.1) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    855318 8pmv:G (2.1) BS02 dna N/A GO:0000981 ... Q9NY43 39753777
    855319 8pmv:J (2.1) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    855320 8pmv:J (2.1) BS02 dna N/A GO:0000981 ... Q9NY43 39753777
    855321 8pn1:A (2.4) BS01 ATP ? N/A B4XT64 38600265
    855322 8pn1:A (2.4) BS02 MG ? N/A B4XT64 38600265
    855323 8pn1:B (2.4) BS01 ATP ? N/A B4XT64 38600265
    855324 8pn1:B (2.4) BS02 MG ? N/A B4XT64 38600265
    855325 8pn1:C (2.4) BS01 ATP ? N/A B4XT64 38600265
    855326 8pn1:C (2.4) BS02 MG ? N/A B4XT64 38600265
    855327 8pn1:D (2.4) BS01 ATP ? N/A B4XT64 38600265
    855328 8pn1:D (2.4) BS02 MG ? N/A B4XT64 38600265
    855329 8pn1:E (2.4) BS01 ATP ? N/A B4XT64 38600265
    855330 8pn1:E (2.4) BS02 MG ? N/A B4XT64 38600265
    855331 8pn1:F (2.4) BS01 ATP ? N/A B4XT64 38600265
    855332 8pn1:F (2.4) BS02 MG ? N/A B4XT64 38600265
    855333 8pn2:A (2.63) BS01 ATP ? GO:0005524 ... A0A8K1DE77 38600265
    855334 8pn2:A (2.63) BS02 MG ? GO:0005524 ... A0A8K1DE77 38600265
    855335 8pn2:B (2.63) BS01 ATP ? GO:0005524 ... A0A8K1DE77 38600265
    855336 8pn2:B (2.63) BS02 MG ? GO:0005524 ... A0A8K1DE77 38600265
    855337 8pn2:C (2.63) BS01 ATP ? GO:0005524 ... A0A8K1DE77 38600265
    855338 8pn2:C (2.63) BS02 MG ? GO:0005524 ... A0A8K1DE77 38600265
    855339 8pn2:D (2.63) BS01 ATP ? GO:0005524 ... A0A8K1DE77 38600265
    855340 8pn2:D (2.63) BS02 MG ? GO:0005524 ... A0A8K1DE77 38600265
    855341 8pn2:E (2.63) BS01 ATP ? GO:0005524 ... A0A8K1DE77 38600265
    855342 8pn2:E (2.63) BS02 MG ? GO:0005524 ... A0A8K1DE77 38600265
    855343 8pn2:F (2.63) BS01 ATP ? GO:0005524 ... A0A8K1DE77 38600265
    855344 8pn2:F (2.63) BS02 MG ? GO:0005524 ... A0A8K1DE77 38600265
    855345 8pn3:A (1.44) BS01 peptide ? GO:0004553 ... N/A N/A
    855346 8pn3:A (1.44) BS02 ZN ? GO:0004553 ... N/A N/A
    855347 8pn3:A (1.44) BS03 ZN ? GO:0004553 ... N/A N/A
    855348 8pn3:B (1.44) BS01 peptide ? GO:0004553 ... N/A N/A
    855349 8pn4:A (2.6) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    855350 8pn4:A (2.6) BS02 dna N/A GO:0000981 ... Q9NY43 39753777
    855351 8pn4:A (2.6) BS03 dna N/A GO:0000981 ... Q9NY43 39753777
    855352 8pn4:D (2.6) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    855353 8pn4:D (2.6) BS02 dna N/A GO:0000981 ... Q9NY43 39753777
    855354 8pn4:D (2.6) BS03 dna N/A GO:0000981 ... Q9NY43 39753777
    855355 8pn4:G (2.6) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    855356 8pn4:G (2.6) BS02 dna N/A GO:0000981 ... Q9NY43 39753777
    855357 8pn4:J (2.6) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    855358 8pn4:J (2.6) BS02 dna N/A GO:0000981 ... Q9NY43 39753777
    855359 8pn4:M (2.6) BS01 dna N/A GO:0000981 ... Q9NY43 39753777
    855360 8pn5:A (1.72) BS01 peptide ? GO:0004553 ... N/A N/A
    855361 8pn5:A (1.72) BS02 ZN ? GO:0004553 ... N/A N/A
    855362 8pn5:B (1.72) BS01 peptide ? GO:0004553 ... N/A N/A
    855363 8pn5:B (1.72) BS02 ZN ? GO:0004553 ... N/A N/A
    855364 8pn5:C (1.72) BS01 peptide ? GO:0004553 ... N/A N/A
    855365 8pn5:D (1.72) BS01 peptide ? GO:0004553 ... N/A N/A
    855366 8pn5:E (1.72) BS01 peptide ? GO:0004553 ... N/A N/A
    855367 8pn5:E (1.72) BS02 ZN ? GO:0004553 ... N/A N/A
    855368 8pn5:F (1.72) BS01 peptide ? GO:0004553 ... N/A N/A
    855369 8pn5:F (1.72) BS02 ZN ? GO:0004553 ... N/A N/A
    855370 8pn5:G (1.72) BS01 peptide ? GO:0004553 ... N/A N/A
    855371 8pn5:G (1.72) BS02 ZN ? GO:0004553 ... N/A N/A
    855372 8pn5:H (1.72) BS01 peptide ? GO:0004553 ... N/A N/A
    855373 8pn5:H (1.72) BS02 ZN ? GO:0004553 ... N/A N/A
    855374 8pn7:A (2.03) BS01 COA 6.4.1.3 GO:0004658 ... C5AP75 37983631
    855375 8pn7:A (2.03) BS02 COA 6.4.1.3 GO:0004658 ... C5AP75 37983631
    855376 8pn7:A (2.03) BS03 BTI 6.4.1.3 GO:0004658 ... C5AP75 37983631
    855377 8pn7:B (2.03) BS01 COA 6.4.1.3 GO:0004658 ... C5AP75 37983631
    855378 8pn7:B (2.03) BS02 COA 6.4.1.3 GO:0004658 ... C5AP75 37983631
    855379 8pn7:B (2.03) BS03 BTI 6.4.1.3 GO:0004658 ... C5AP75 37983631
    855380 8pn7:C (2.03) BS01 COA 6.4.1.3 GO:0004658 ... C5AP75 37983631
    855381 8pn7:C (2.03) BS02 COA 6.4.1.3 GO:0004658 ... C5AP75 37983631
    855382 8pn7:C (2.03) BS03 BTI 6.4.1.3 GO:0004658 ... C5AP75 37983631
    855383 8pn7:D (2.03) BS01 COA 6.4.1.3 GO:0004658 ... C5AP75 37983631
    855384 8pn7:D (2.03) BS02 COA 6.4.1.3 GO:0004658 ... C5AP75 37983631
    855385 8pn7:D (2.03) BS03 BTI 6.4.1.3 GO:0004658 ... C5AP75 37983631
    855386 8pn7:E (2.03) BS01 COA 6.4.1.3 GO:0004658 ... C5AP75 37983631
    855387 8pn7:E (2.03) BS02 COA 6.4.1.3 GO:0004658 ... C5AP75 37983631
    855388 8pn7:E (2.03) BS03 BTI 6.4.1.3 GO:0004658 ... C5AP75 37983631
    855389 8pn7:F (2.03) BS01 COA 6.4.1.3 GO:0004658 ... C5AP75 37983631
    855390 8pn7:F (2.03) BS02 COA 6.4.1.3 GO:0004658 ... C5AP75 37983631
    855391 8pn7:F (2.03) BS03 BTI 6.4.1.3 GO:0004658 ... C5AP75 37983631
    855392 8pn7:G (2.03) BS01 BTI 6.4.1.3 GO:0004658 ... C5AWU5 37983631
    855393 8pn7:H (2.03) BS01 BTI 6.4.1.3 GO:0004658 ... C5AWU5 37983631
    855394 8pn7:I (2.03) BS01 BTI 6.4.1.3 GO:0004658 ... C5AWU5 37983631
    855395 8pn7:J (2.03) BS01 BTI 6.4.1.3 GO:0004658 ... C5AWU5 37983631
    855396 8pn7:K (2.03) BS01 BTI 6.4.1.3 GO:0004658 ... C5AWU5 37983631
    855397 8pn7:L (2.03) BS01 BTI 6.4.1.3 GO:0004658 ... C5AWU5 37983631
    855398 8pn8:A (2.31) BS01 COA 6.4.1.3 GO:0004658 ... C5AP75 37983631
    855399 8pn8:B (2.31) BS01 COA 6.4.1.3 GO:0004658 ... C5AP75 37983631
    855400 8pn8:C (2.31) BS01 COA 6.4.1.3 GO:0004658 ... C5AP75 37983631

    Reference:
  • Chengxin Zhang, Xi Zhang, Lydia Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).